Phylogenetic evidence for an animal pathogen origin of ergot and the grass endophytes

Grass-associated fungi (grass symbionts) in the family Clavicipitaceae (Ascomycota, Hypocreales) are species whose host range is restricted to the plant family Poaceae and rarely Cyperaceae. The best-characterized species include Claviceps purpurea (ergot of rye) and Neotyphodium coenophialum (endophyte of tall fescue). They have been the focus of considerable research due to their importance in agricultural and grassland ecosystems and the diversity of their bioactive secondary metabolites. Here we show through multigene phylogenetic analyses and ancestral character state reconstruction that the grass symbionts in Clavicipitaceae are a derived group that originated from an animal pathogen through a dynamic process of interkingdom host jumping. The closest relatives of the grass symbionts include the genera Hypocrella, a pathogen of scale insects and white flies, and Metarhizium, a generalist arthropod pathogen. These data do not support the monophyly of Clavicipitaceae, but place it as part of a larger clade that includes Hypocreaceae, a family that contains mainly parasites of other fungi. A minimum of 5-8 independent and unidirectional interkingdom host jumps has occurred among clavicipitaceous fungi, including 3-5 to fungi, 1-2 to animals, and 1 to plants. These findings provide a new evolutionary context for studying the biology of the grass symbionts, their role in plant ecology, and the evolution of host affiliation in fungal symbioses.     

A study of two fungal epibionts of grasses: structural features,host relationships,and classification in the genus Myriogenospora (Clavicipitales)

Morphological studies are made on specimens referred to Myriogenospora atramentosa and Balansia linearis. Stromata of both are epibiotic, linear, and have immersed perithecia. In addition, development of ascospores proceeds in a similar fashion. Linear filamentous ascospores disarticulate to form short segments that reinitiate bipolar growth at opposite ends to form fusoid-shaped part-spores. This method of part-spore development is unknown to occur in other Clavicipitaceae. As a result of the common features of these species, it is proposed that B. linearis be classified in the genus Myriogenospora. Aspects of the biology and taxonomy of these species are discussed.     

<Emphasis Type="Italic">Helicocollum</Emphasis>, a new clavicipitalean genus pathogenic to scale insects (Hemiptera) in Thailand

A new genus pathogenic to scale insects (Coccidae, Hemiptera), Helicocollum, is described from Thailand. It includes the three species, H. chanthaburiensis, H. krabiensis and H. surathaniensis. Phylogenetic inferences on the basis of partial sequences of the large subunit of the nuclear ribosomal DNA, translation elongation factor 1-α and RNA polymerase II subunit 1 place the new genus in the Clavicipitaceae, although morphological features of the phialides resemble Hirsutella in the Ophiocordycipitaceae. Within the Clavicipitaceae, Helicocollum is closely related to Aschersonia, Moelleriella, Regiocrella, and Samuelsia, all known as pathogens of scale insects. Helicocollum differs from other scale insect pathogens in having phialides with helical necks and synnematous or sporodochial conidiomata, but pycnidia. Morphological characteristics are evaluated and compared with other asexual morphs producing twisted, undulated phialidic necks or occurring on scale insects.     

Relationship of the genusCordyceps and related genera, based on parsimony and spectral analysis of partial 18S and 28S ribosomal gene sequences

A molecular phylogenetic study of selected species of three sub-genera of the genusCordyceps was undertaken, along with representatives of the generaAkanthomyces, Aschersonia, Gibellula, Hymenostilbe, Hypocrella, Nomuraea andTorrubiella, to examine their inter-relationship. Phylogenetic analyses of the data indicated that the Clavicipitaceae form a monophyletic group within the Hypocreales, while the monophyly ofCordyceps was not supported. Four clades were identified:Cor. militaris/Cor. pseudomilitaris; Cor. iranginesis/Cor. sphecocephala; Cor. intermedia/Cor. capitata; andCor. cylindrica/Nom. atypicola. The sub-genusNeocordyceps was shown to be monophyletic while the sub-generaEucordyceps andOphiocordyceps do not form monophyletic groups. The genusHypocrella appeared monophyletic, and radiated after the formation of the generaCordyceps, andTorrubiella. Akanthomyces arachnophilus andGi. pulchra, anamorphs ofTorrubiella species, formed a distinct clade that was separate from one formed by the scale insect pathogens,To. luteorostrata andPaecilomyces cinnamomeus, suggesting that this genus may be polyphyletic.     

Hypocrella panamensis sp. nov. (Clavicipitaceae, Hypocreales): a new species infecting scale insects on Piper carrilloanum in Panama

A new species, Hypocrella panamensis, is described from collections and cultures obtained on Barro Colorado Island, Panama. In order to aid in placement of this fungus, phylogenetic analyses were conducted using LSU (rDNA) sequences. Hypocrella panamensis is characterized by possessing pulvinate stromata with a Lecanicillium-like anamorphic state and superficial perithecia. Hypocrella panamensis consistently grouped in a clade containing Hypocrella nectrioides, H. phyllogena, and H. africana (100 % PP). Most species of Hypocrella possess Aschersonia or Hirsutella anamorphs. Hypocrella panamensis is unique in the genus Hypocrella in possession of a Lecanicillium-like anamorphic state. In its biological habit Hypocrella panamensis is similar to other species in Hypocrella in that it infects and degrades the scale insect, then grows superficially on nutrients that emerge to the plant surface through the stylet wound.     

虫草属分子系统学研究现状

近年来的分子系统学研究结果表明 ,麦角菌目 (Clavicipitales)与肉座菌目 (Hypocreales)以及虫草属[Cordyceps(Fr.)Link]与麦角菌科 (Clavicipitaceae)内的有关种属关系密切 ,但虫草属为一多系群 ,其中只有新虫草亚属的种类形成单系群。虫草属种类的进化与寄主有一定的关系 ,有关研究显示它们在亲缘关系相差很大的寄主之间多次转移。多个独立的ITS序列研究表明 ,阔孢虫草 (CordycepscrassisporaM .Zangetal.)、甘肃虫草(CordycepsgansuensisK .Y .Zhangetal.)、多轴虫草 (CordycepsmultiaxialisM .Zang&Kinjo)、尼泊尔虫草 (CordycepsnepalensisM .Zang&Kinjo)与冬虫夏草 [Cordycepssinensis(Berk.)Sacc.]为同一物种 ;RAPD和ITS序列分析还显示不同地理分布的冬虫夏草存在明显的遗传分化。分子生物学方法在确定有性型与无性型的关系上已经为多种虫草菌提供了有力的证据。本文主要对虫草属分子系统学研究现状进行了综述 ,同时就分子生物学研究中的取样问题、一些分子方法的适用范围以及有性型与无性型的关系等问题进行了讨论。     

A multi-gene phylogeny of Clavicipitaceae (Ascomycota, Fungi): identification of localized incongruence using a combinational bootstrap approach

Multi-gene phylogenetic analyses were conducted to address the evolution of Clavicipitaceae (Ascomycota). Data are presented here for approximately 5900 base pairs from portions of seven loci: the nuclear ribosomal small and large subunit DNA (nrSSU and nrLSU), beta-tubulin, elongation factor 1alpha (EF-1alpha), the largest and second largest subunits of RNA polymerase II (RPB1 and RPB2), and mitochondrial ATP Synthase subunit 6 (mtATP6). These data were analyzed in a complete 66-taxon matrix and 91-taxon supermatrix that included some missing data. Separate phylogenetic analyses, with data partitioned according to genes, produced some conflicting results. The results of separate analyses from RPB1 and RPB2 are in agreement with the combined analyses that resolve a paraphyletic Clavicipitaceae comprising three well-supported clades (i.e., Clavicipitaceae clade A, B, and C), whereas the tree obtained from mtATP6 is in strong conflict with the monophyly of Clavicipitaceae clade B and the sister-group relationship of Hypocreaceae and Clavicipitaceae clade C. The distribution of relative contribution of nodal support for each gene partition was assessed using both partitioned Bremer support (PBS) values and combinational bootstrap (CB) analyses, the latter of which analyzed bootstrap proportions from all possible combinations of the seven gene partitions. These results suggest that CB analyses provide a more consistent estimate of nodal support than PBS and that combining heterogeneous gene partitions, which individually support a limited number of nodes, results in increased support for overall tree topology. Analyses of the 91-taxa supermatrix data sets revealed that some nodes were more strongly supported by increased taxon sampling. Identifying the localized incongruence of mtATP6 and analyses of complete and supermatrix data sets strengthen the evidence for rejecting the monophyly of Clavicipitaceae and much of the current subfamilial classification of the family. Although the monophyly of the grass-associated subfamily Clavicipitoideae (e.g., Claviceps, Balansia, and Epichlo?) is strongly supported, the subfamily Cordycipitoideae (e.g., Cordyceps and Torrubiella) is not monophyletic. In particular, species of the genus Cordyceps, which are pathogens of arthropods and truffles, are found in all three clavicipitaceous clades. These results imply that most characters used in the current familial classification of Clavicipitaceae are not diagnostic of monophyly.     

Fungal endophytes of grasses and their effects on an insect herbivore

Summary The effects of endophytic fungi (Tribe Balansiae, Clavicipitaceae, Ascomycetes) of grasses on an insect herbivore were studied by feeding paired groups of larvae of the fall armyworm (Spodoptera frugiperda, Noctuidae, Lepidoptera) leaves from either infected or uninfected individuals. Perennial ryegrass infected by the Lolium endophyte, tall fescue infected by Epichloe typhina, dallisgrass infected by Myriogenospora atramentosa, Texas wintergrass infected by Atkinsonella hypoxylon, and sandbur infected by Balansia obtecta were utilized. The endophytes of ryegrass and fescue previously have been shown to be toxic to mammalian herbivores and to deter feeding of some insect herbivores. In this study we extend the antiherbivore properties of those endophytes to the fall armyworm and demonstrate that fungal endophytes in three other genera have similar antiherbivore properties. For most grasses, survival and weights of fall armyworm larvae fed infected leaves were significantly lower and larval duration was significantly longer compared to larvae fed uninfected leaves. Resistance to herbivores may provide a selective advantage to endophyte-infected grasses in natural populations.     

滇川桂3省暗褐网柄牛肝菌菌腔虫瘿的寄主植物与介壳虫种类调查

暗褐网柄牛肝菌Phlebopus portentosus与介壳虫形成的菌腔虫瘿是该菌营养机制研究的关键环节。本研究先后在云南、四川和广西3省区暗褐网柄牛肝菌产区的16个地点,对菌腔虫瘿的生态和生物学进行了大量的野外调查。发现根部着生菌腔虫瘿的寄主植物有31种,涉及16个科的28个属。与暗褐网柄牛肝菌形成菌腔虫瘿的介壳虫种类有12种,其中10种隶属粉蚧科Pseudococcidae、绵蚧科Monophlebidae、蚧科Coccidae各1种。在不同的寄主植物上菌腔虫瘿的寄生位置和形状会有所不同,与暗褐网柄牛肝菌菌丝形成菌腔虫瘿的寄主植物和介壳虫之间不存在专一性。上述研究结果为暗褐网柄牛肝菌的仿生栽培奠定了基础。     

Two new species of Pseudogymnoascus with Geomyces anamorphs and their phylogenetic relationship with Gymnostellatospora

Two new psychrophilic Pseudogymnoascus species with Geomyces anamorphs are described from a Sphagnum bog in Alberta, Canada. Pseudogymnoascus appendiculatus has long, branched, orange appendages and smooth, fusoid to ellipsoidal ascospores with a faint longitudinal rim. Pseudogymnoascus verrucosus has short, subhyaline appendages and warty peridial hyphae and ascospores, and both smooth to asperulate and irregularly warty conidia. Both species produce asci in chains, a feature that supports the distinction between this group and Myxotrichum, which produces asci singly. The discovery of species intermediate between Pseudogymnoascus and Gymnostellatospora, in having both ornamented ascospores and Geomyces anamorphs, prompted a re-evaluation of the genera. Sequence analysis of the internal transcribed spacer regions (ITS) of the nuclear ribosomal DNA indicates that the two genera remain distinct and comprise a monophyletic group. Pseudogymnoascus species have smooth to warty or lobate-reticulate ascospores while species of Gymnostellatospora have walnut-shaped spores with distinct longitudinal crests and striations. Anamorphs assignable to the form genus Geomyces are allied with both genera. A key is provided to the four species and varieties of Pseudogymnoascus.     

The oldest fossil evidence of animal parasitism by fungi supports a Cretaceous diversification of fungal-arthropod symbioses

Paleoophiocordyceps coccophagus, a fungal parasite of a scale insect from the Early Cretaceous (Upper Albian), is reported and described here. This fossil not only provides the oldest fossil evidence of animal parasitism by fungi but also contains morphological features similar to asexual states of Hirsutella and Hymenostilbe of the extant genus Ophiocordyceps (Ophiocordycipitaceae, Hypocreales, Sordariomycetes, Pezizomycotina, Ascomycota). Because species of Hypocreales collectively exhibit a broad range of nutritional modes and symbioses involving plants, animals and other fungi, we conducted ancestral host reconstruction coupled with phylogenetic dating analyses calibrated with P.coccophagus. These results support a plant-based ancestral nutritional mode for Hypocreales, which then diversified ecologically through a dynamic process of intra- and interkingdom host shifts involving fungal, higher plant and animal hosts. This is especially evident in the families Cordycipitaceae, Clavicipitaceae and Ophiocordycipitaceae, which are characterized by a high occurrence of insect pathogens. The ancestral ecologies of Clavicipitaceae and Ophiocordycipitaceae are inferred to be animal pathogens, a trait inherited from a common ancestor, whereas the ancestral host affiliation of Cordycipitaceae was not resolved. Phylogenetic dating supports both a Jurassic origin of fungal-animal symbioses within Hypocreales and parallel diversification of all three insect pathogenic families during the Cretaceous, concurrent with the diversification of insects and angiosperms.     

Hirsutella uncinata, a new hyphomycete from Australia

Hirsutella uncinata, collected on follicles of Hakea sp. in New South Wales, Australia, is described as a new anamorph species. The fungus produces stiff, erect, verticillate conidiophores with up to 10 whorls of hooked, phialidic conidiogenous cells that have rough-walled necks. The conidia are subfusiform, flattened on one side and produced in groups of 2-3 in a dense slimy ball at the end of each phialide. Parsimony analysis of aligned internal transcribed spacer rDNA sequences suggests that H. uncinata is closely related to the Cordyceps sinensis complex (Clavicipitaceae, Hypocreales), which includes species with morphologically similar anamorphs.     

Hopane triterpenes as chemotaxonomic markers for the scale insect pathogens Hypocrella s. lat. and Aschersonia

The scale insect pathogens Hypocrella s. lat. and their Aschersonia anamorphs, collected at various locations in Thailand, were surveyed for their productivity of three hopane triterpenes, zeorin (6α,22-dihydroxyhopane), dustanin (15α,22-dihydroxyhopane), and 3β-acetoxy-15α,22-dihydroxyhopane, when cultured in a liquid medium (potato-dextrose broth) under static conditions. Among 53 strains of Aschersonia species, 48 strains (91 %) produced at least one of these compounds. Hypocrella and Moelleriella species (43 strains) also frequently produced these triterpenoids; only two strains lacked all of these triterpenes. The results demonstrate that hopane triterpenes may be suitable for use as chemotaxonomic markers for Hypocrella and Moelleriella species and their Aschersonia anamorphs.     

A new species of endophytic Balansia from Veracruz, Mexico

A new graminicolous species of Clavicipitaceae, Balansia brunnans sp. nov., has been found to infect Panicum xalapénse. Staining of living host tissues indicates the presence of intercellular endophytic mycelium. Stromata develop just below the nodes on the culms. Balansia brunnans is comparable to Balansia aristidae, B. discoidea, B. gaduae, B. nigricans, and B. strangulans in development of stromata on culms and possession of an endophytic mycelial stage. Among the differences between Balansia brunnans and other comparable species is that it possesses a brown perithecial stroma, whereas comparable species have black perithecial stromata. A key is provided to distinguish B. brunnans from similar species.     

渗透胁迫下内生真菌感染对黑麦草幼苗生长的影响

以含有内生真菌的黑麦草(Lolium perenne L．)种子为材料,采用4C冰箱内和20℃光照培养箱内保存18个月的方式分别构建内生真菌感染(EI)和内生真菌非感染(EF)的黑麦草种群,通过比较EI和EF种群在正常条件下(对照)和渗透胁迫条件下种子发芽、幼苗生长等方面的差异,探讨内生真菌对其宿主植物的直接和间接影响。结果表明：在对照和胁迫条件下,E1种子的发芽势均明显高于EF种子,而只在重度渗透胁迫下,E1种子的发芽率才显著高于EF种子。对于黑麦草幼苗而言,渗透胁迫下内生真菌对宿主植物的地上部分和地下部分均有增益作用,最终表现为E1种群的总生物量显著高于EF种群,其中对地上部分的促进作用表现为内生真菌的存在不仅提高了宿主叶片的延伸速率、使EI叶片比EF叶片更长、叶面积更大,而且在重度胁迫下,E1种群的分蘖数也显著高于EF种群;对地下部分的促进作用表现为EI种群的根系总长度和根干重均高于EF种群。     

Molecular phylogeny suggests a single origin of insect symbiosis in the Pucciniomycetes with support for some relationships within the genus Septobasidium

In the Pucciniomycetes, a class of fungi that includes the plant pathogenic rust fungi, insect parasitism is restricted to a single family, the Septobasidiaceae. The Septobasidiaceae form a variety of symbioses with scale insects and have remained largely unstudied since the 1930s. Transitions between plant and animal parasitism and between mutualism and parasitism cannot be fully addressed in the Basidiomycota without a clear phylogenetic hypothesis for the Septobasidiales. Here, molecular phylogenetic methods were applied to understand the origin of scale insect parasitism, test the monophyly of the order Septobasidiales, and evaluate the infrageneric concepts in the largest genus of scale insect parasites, Septobasidium. DNA sequence data from rRNA genes were used to infer higher-level relationships within the Pucciniomycetes, and data from translation elongation factor 1-alpha (tef1) were added for phylogenetic inference within the Septobasidiaceae. Data from tef1 revealed different intron arrangements within Septobasidium, but the molecule did not provide much additional phylogenetically informative data. Likelihood-model-based phylogenetic analyses of 44 Pucciniomycotina taxa provided moderate support for a single origin of insect parasitism. Within the Septobasidiaceae, there was little or no support for a monophyletic Septobasidium, and well-resolved subclades of Septobasidium species contradict previous morphological delimitations of groups within the genus.     

A combined ITS rDNA and β-tubulin phylogeny of Thai species of Hypocrella with non-fragmenting ascospores

A combined ITS and β-tubulin gene phylogeny has revealed new species of Hypocrella and Aschersonia related to the type species Hypocrella discoidea from natural forest in Thailand. As a result, Hypocrella calendulina and Hypocrella luteola are named as new species with Aschersonia sensu stricto anamorphs for specimens previously identified as Hypocrella discoidea sensu Petch. Hypocrella siamensis and Aschersonia minutispora are described as new species, both exhibiting brown stromata, with the former producing whole ascospores.     

Phylogenetic and taxonomic evaluation of Chalara, Chalaropsis, and Thielaviopsis anamorphs associated with Ceratocystis

Parsimony analysis of sequences of the internal transcribed spacer region of the nuclear rDNA and partial sequences of the large subunit (LSU) place four anamorphic Chalara species as a monophyletic grouping within the teleomorph genus Ceratocystis. Chalara ovoidea, Ch. thielavioides, Ch. populi, and Ch. elegans (synanamorph: Thielaviopsis basicola) form aleurioconidia typical of the anamorph genus Thielaviopsis, to which the species are transferred. Three of these species (T. ovoidea, T. thielavioides, and T. populi) are morphologically similar to each other but are shown to be distinct by rDNA sequences. The anamorphic genera Chalaropsis and Hughesiella are considered synonyms of Thielaviopsis. Thielaviopsis punctulata, which forms aleurioconidia singly, is shown to be the anamorph of Ce. radicicola. The respective anamorphs for Ce. coerulescens, Ce. fagacearum, and Ce. eucalypti, which lack aleurioconidia, are also transferred to the amended genus Thielaviopsis as T. ungeri, T. quercina, and T. eucalypti. Although Ch. australis and Ch. neocaledoniae do not form aleurioconidia, they are placed in Thielaviopsis based on their endoconidial state and clear affinities to Ceratocystis eucalypti. Three apparently asexual Ambrosiella species belong in the Ce. moniliformis clade based on LSU rDNA sequences, but the cultures available are not suitable for detailed morphological study, and these species are not transferred to Thielaviopsis.