Degradation of waste waters from olive oil mills by Yarrowia lipolytica ATCC 20255 and Pseudomonas putida

Waste waters from olive oil processing may cause severe pollution in the Mediterranean area, since they have a high level of chemical oxygen demand (COD) (100–200 g/l) and contain other organic and inorganic compounds. In all olive oil producing countries, the reduction of pollution in olive oil mill waste waters at reasonable costs and using techniques suitable for most industrial applications is an unsolved problem. For this paper, the yeast Yarrowia lipolytica ATCC 20255 was grown on waste waters from an olive oil mill in a 3.5 1 fermenter under batch culture conditions. The results showed that the yeast was capable of reducing the COD value by 80% in 24 h. In this way, a useful biomass of 22.45 g/l as single cell protein (SCP) and enzyme lipase were produced. During this process, most of the organic and inorganic substances were consumed, only aromatic pollutants were still present in the fermentation effluents. Therefore, we used a phenol degrader, namely Pseudomonas putida, to reduce phenolic compounds in the fermentation effuents after removing Yarrowia lipolytica cells. P. putida was effective in reducing phenols in only 12 h.     

Conversion of oil waste to valuable fatty acids using Oleaginous yeast

Oil waste poses a highly dangerous threat to the environment, mainly because it is considered a high energy demanding degradation process. Oleaginous yeast utilizing oil waste to produce microbial fatty acids is considered an innovative method for oil waste elimination. In the present study, fifteen yeast isolates were screened for their lipid content, three of which were chosen for their high lipid content as compared to the standard strain Phaffia rhodozyma NRRL-Y-10921. The three selected isolates were further screened for their fatty acid profile. Yeast isolate (NC-I), identified as Yarrowia lipolytica, was chosen because it exceeded the lipid production of the standard strain by 21%, it also produced the highest C 14:0 (myristic acid), C 18:1 (oleic acid) and C18:2 (linoleic acid), compared to the other two isolates. Growth on different oil wastes resulted in an increase in total lipid content which reached its maximum when oil waste of frying vegetables was added to the media (57.89%). A variation in the fatty acid profile was detected when different types of oil waste were used before and after fermentation. The addition of different glucose concentrations to the vegetable oil waste media resulted in the appearance of C 22:0 (behenic acid) which was not present when the basal medium was used. Scanning Electron Microscopy indicated morphologic changes when the yeast was grown in high glucose concentration as compared to those grown in oil waste media. The activity of malate dehydrogenase (MDH) enzyme exhibited a correlative relationship with the lipid content under various glucose concentrations. The obtained results indicate that vegetable oil waste is suitable for microbial fatty acid production and that the fatty acid profile could be maneuvered through the manipulation of the fermentation media.     

Demethylation of aromatic compounds by strain B10 and complete degradation of 3-methoxybenzoate in co-culture with Desulfosarcina strains

Summary A pure culture presumably of an Acetobacterium sp. from a waste water pond, strain B10, was able to grow with several methoxylated aromatic compounds by demethylation (or demethoxylation) to the corresponding hydroxilated substances. Acetate was formed from the eliminated methyl or methoxy groups and from CO₂. Demethylation of 3-methoxybenzoate occurred simultaneously with glucose or lactate fermentation if induced, methanol-grown cells of strain B10 were used as an inoculum. If 2-vanillin or 2,3-dimethoxybenzaldehyde were supplied as the only carbon sources, these substances were first oxidized to the corresponding benzoic acid derivatives and subsequently demethylated. In mixed cultures of strain B10 and Desulfosarcina variabilis or Desulfosarcina strain DSU3 the 3-hydroxybenzoate formed by strain B10 from 3-methoxybenzoate was completely degraded to acetate and presumably CO₂ by the sulphate reducers. Acetate could be oxidized to CO₂ upon extended incubation. The complete degradation of 3-methoxybenzoate to CO₂ by co-cultures of strain B10 and Desulfosarcina strains seemed to proceed via a commensalistic, rather than via a syntrophic interaction of the participating organisms. Offprint requests to: J. Winter     

Phosphorus removal coupled to bioenergy production by three cyanobacterial isolates in a biofilm dynamic growth system

In the present study a closed incubator, designed for biofilm growth on artificial substrata, was used to grow three isolates of biofilm-forming heterocytous cyanobacteria using an artificial wastewater secondary effluent as the culture medium. We evaluated biofilm efficiency in removing phosphorus, by simulating biofilm-based tertiary wastewater treatment and coupled this process with biodiesel production from the developed biomass. The three strains were able to grow in the synthetic medium and remove phosphorus in percentages, between 6 and 43%, which varied between strains and also among each strain according to the biofilm growth phase. Calothrix sp. biofilm turned out to be a good candidate for tertiary treatment, showing phosphorus reducing capacity (during the exponential biofilm growth) at the regulatory level for the treated effluent water being discharged into natural water systems.

Besides phosphorus removal, the three cyanobacterial biofilms produced high quality lipids, whose profile showed promising chemical stability and combustion behavior. Further integration of the proposed processes could include the integration of oil extracted from these cyanobacterial biofilms with microalgal oil known for high monounsaturated fatty acids content, in order to enhance biodiesel cold flow characteristics.     

Characterization of moderately halotolerant selenate- and tellurite-reducing bacteria isolated from brackish areas in Osaka

Moderately halotolerant selenate- and tellurite-reducing bacteria were characterized for wastewater treatment applications. A selenate-reducing strain 9a was isolated from the biofilm of a leachate treatment plant at a sea-based waste disposal site. A tellurite-reducing strain Taa was isolated from an enrichment culture derived from brackish sediment. Both bacterial strains were Shewanella species. Strain 9a could anaerobically remove 45–70% of 1.0 mM selenate and selenite from water containing up to 3% NaCl within 4 days, while strain Taa could anaerobically and aerobically remove 70–90% of 0.4 mM tellurite from water containing up to 6% NaCl within 3 days. Globular particles of insoluble selenium were observed both outside and inside the cells of strain 9a. The insoluble tellurium formed by strain Taa was globular under microaerobic conditions but nanorod under aerobic conditions. These bacteria will yield a range of useful selenium and tellurium nanomaterials as well as wastewater treatment applications.     

Removal of cadmium from scallop hepatopancreas by microbial processes

A microbial process for removing cadmium from a homogenate of hepatopancreas, a waste of scallop processing, was devised to use this waste for value-added protein resources. Microorganisms were screened on the basis of the ability to remove cadmium from a medium with the initial concentration of 10 mg/l of cadmium. One soil isolate, identified as Xanthomonas sp. UR No. 2 by its taxonomical characteristics, removed 98% of the cadmium in the medium in 2 d. During cultivation of this strain in the homogenates of hepatopancreas digested by endopeptidases, 90% of cadmium was removed, while this strain had little effect on the simple non-digested homogenates. The mass balance of cadmium during homogenizations of the hepatopancreas tissues and cultivations in the protease-treated homogenate were examined. The content of crude proteins of culture supernatant treated by Xanthomonas sp. UR No. 2 was equivalent to those of various feedstuffs on the market.     

Glyphosate degradation by immobilized bacteria: laboratory studies showing feasibility for glyphosate removal from waste water.

To evaluate immobilized bacteria technology for the removal of low levels of glyphosate (N-phosphonomethylglycine) from aqueous industrial effluents, microorganisms with glyphosate-degrading activity obtained from a fill and draw enrichment reactor inoculated with activated sludge were first exposed to glyphosate production wastes containing 500-2000 mg glyphosate/L. The microorganisms were then immobilized by adsorption onto a diatomaceous earth biocarrier contained in upflow Plexiglas columns. The columns were aerated, maintained at pH 7.0-8.0, incubated at 25 degrees C, supplemented with NH4NO3 (50 mg/L), and exposed to glyphosate process wastes pumped upflow through the biocarrier. Glyphosate degradation to aminomethylphosphonic acid was initially > 96% for 21 days of operation at flows yielding hydraulic residence times (HRTs) as short as 42 min. Higher flow rate studies showed > 98% removal of 50 mg glyphosate/L from the waste stream could be achieved at a HRT of 23 min. Glyphosate removal of > 99% at a 37-min HRT was achieved under similar conditions with a column inoculated with a pure culture of Pseudomonas sp. strain LBr, a bacterium known to have high glyphosate-degrading activity. After acid shocking (pH 2.8 for 18 h) of a column of immobilized bacteria, glyphosate-degrading activity was regained within 4 days without reinoculation. Although microbial growth and glyphosate degradation were not maintained under low organic nutrient conditions in the laboratory, the low levels of degradable carbon (45-94 mg/L) in the industrial effluent were sufficient to support prolonged glyphosate-degrading activity. The results demonstrated that immobilized bacteria technology is effective in removing low levels of glyphosate in high-volume liquid waste streams.     

Molecular characterization of the bacterial composition in two waste silk refining systems

Spontaneous fermentation is a traditional and ecologically friendly way to purify silk, but the knowledge of the microbial structure in this system is limited. The fermentation liquids (W1 and W2) from two waste silk refining systems were analyzed for their bacterial community and diversity. W1 had higher oil-removing and degumming efficiency than W2, and so was superior for the recovery of waste silk. The bacterial community structures of W1 and W2 were characterized by polymorphisms in the 16S rRNA gene. Two corresponding clone libraries (C1 and C2) were constructed from each system. Using amplified rDNA restriction analysis (ARDRA), 112 randomly selected clones were grouped in 24 operational taxonomic units (OTUs) from C1 and 113 clones were grouped in 20 OTUs from C2. The bacterial diversity of C1 was higher than C2 according to the Shannon–Weaver index. Sequencing and phylogenetic analysis indicated that Firmicutes were the most dominant group in both samples, followed by Bacteroidetes. Clones related to Synergistetes were only found in C1. This investigation expands substantially our knowledge of the bacterial composition and diversity in waste silk refining systems. The results also revealed that the silk-spinning system may harbor a bacterial population structure suitable for metagenomic mining for novel bacterial lipase, esterase, and protease.     

Bioremediation of Crude Oil–Contaminated Soil By Immobilized Bacteria on an Agroindustrial Waste—Sunflower Seed Husks

This study reports the immobilization and performance of a hydrocarbon-degrading Rhodococcus sp. strain (designated as QBTo) on sunflower seed husks (SH) for the bioremediation of soils polluted with crude oil. The SH performance as inoculants carrier was compared with peat, which is a vegetal material traditionally used in carrier-based inoculants production. The stability of the immobilized culture under storage conditions was assessed by viability at different times when stored at 25°C and 10°C. The catabolic activity of immobilized and free QTBo cells introduced into sandy loam soil, freshly contaminated with crude oil, was studied in microcosms. A higher number of viable QTBo cells were recovered from the inoculants formulated with SH (QTBo-SH) after prolonged storage at 10°C and 25°C. The microcosms amended with QTBo-SH inoculants showed a removal of about 66% of total petroleum hydrocarbons (TPH), whereas in those inoculated with QTBo-peat inoculants, the decrease was of about 47%. In the control microcosms (noninoculated) and liquid culture–amended soils, the TPH removal was about 28%. SH is a waste of edible oil industry, nontoxic, and biodegradable and has demonstrated to confer to the immobilized cultures greater potential to survive not only during storage but also in the soil environment, improving bioremediation process.     

Anaerobic degradation of phenylacetic acid by mixed and pure cultures

Summary A phenylacetic acid-degrading mixed culture was enriched from effluent of an anaerobic reactor for the treatment of waste water from cellulose bleaching. From this consortium a phenylacetic acid-degrading pure culture, strain DSU3, was isolated and, due to its typical morphology and substrate spectrum, tentatively classified as a Desulfosarcina sp. It could grow on and degrade phenylacetic acid, cyclohexane carboxylate, cyclohexylacetate, benzoate, fumaric acid and several volatile fatty acids, while phenol, o-hydroxybenzoate, p-hydroxybenzoate and glucose were not utilized. Production of mandelic acid from phenylacetic acid by the enrichment culture and utilization of benzoate, an intermediate of the mandelic acid pathway, by strain DSU3 may presumably indicate degradation of phenylacetic acid via the mandelic acid pathway.     

脱氮除磷假单胞菌的筛选及定量检测

【目的】筛选具有较强脱氮除磷能力的细菌,建立结合S1酶保护分析的分子探针技术,以分析该菌在发酵过程中的数量变化情况。【方法】采用缺磷培养基厌氧培养、富磷培养基好氧培养和硝酸盐还原产气实验进行脱氮除磷菌筛选。通过16S rRNA基因序列分析及同源性比对,结合菌株的生理生化鉴定试验,鉴定筛选株。设计相应的16S rRNA探针组,建立结合S1酶保护分析的分子探针技术。【结果】筛选的菌株被鉴定为假单胞菌Pseudomonas sp.,命名为LY10。菌株LY10在富磷培养基中好氧培养24 h,总磷去除率达90.01%。在反硝化聚磷培养基中培养48 h,总氮和总磷去除率分别为84.71%和89.37%。针对假单胞菌16S rRNA基因序列设计了一组用于结合S1酶保护分析的分子探针Probe-P.sp,该探针具有很高的甄别灵敏度,能够将LY10与丛毛单胞属(Commonas)等5种细菌区分开;分子探针定量分析假单胞菌LY10,其细胞量与吸光值呈线性关系,检测的线性范围为103~106 cells/mL,线性方程为:y=-0.967 87+0.372 99x(R2=0.996 7,n=5)。【结论】新筛的假单胞菌LY10的脱氮除磷能力较强,具有生物脱氮除磷的工业化应用潜质。所建立的结合S1酶保护分析的分子探针技术的特异性和灵敏度良好,有望应用于混菌体系中的假单胞菌的定性定量分析。     

Bioaccumulation and biosorption of Co2+ by Neurospora crassa

Summary Mycelial biomass of wild type and a Co²⁺-resistant N.crassa (cor) was used to remove Co²⁺ from aqueous media. Mycelia obtained from growth in nitrate N-medium (NaNO₃) was more effective than ammonium N-medium (NH₄NO₃), in removing Co²⁺. Co²⁺-resistant N.crassa cor was more efficient than wild type in removing Co²⁺ from medium containing higher concentrations (500 mg/L). Metal removal was linear up to 12 h at which 35–60% Co²⁺ is depleted from medium, reaching near saturation by 24 h (90% removal). Co²⁺ removal was as efficient even from pure solutions and sodium azide inhibited the process up to 60%. Cell walls prepared from nitrate N-medium grown mycelia bound 3–5 fold more Co²⁺ when compared to ammonium N-medium. The importance of bioaccumulation and biosorption in bioremediating toxic metal ions from effluents is discussed.     

Silk scaffolds connected with different naturally occurring biomaterials for prostate cancer cell cultivation in 3D

In the present work, different biopolymer blend scaffolds based on the silk protein fibroin from Bombyx mori (BM) were prepared via freeze‐drying method. The chemical, structural, and mechanical properties of the three dimensional (3D) porous silk fibroin (SF) composite scaffolds of gelatin, collagen, and chitosan as well as SF from Antheraea pernyi (AP) and the recombinant spider silk protein spidroin (SSP1) have been systematically investigated, followed by cell culture experiments with epithelial prostate cancer cells (LNCaP) up to 14 days. Compared to the pure SF scaffold of BM, the blend scaffolds differ in porous morphology, elasticity, swelling behavior, and biochemical composition. The new composite scaffold with SSP1 showed an increased swelling degree and soft tissue like elastic properties. Whereas, in vitro cultivation of LNCaP cells demonstrated an increased growth behavior and spheroid formation within chitosan blended scaffolds based on its remarkable porosity, which supports nutrient supply matrix. Results of this study suggest that silk fibroin matrices are sufficient and certain SF composite scaffolds even improve 3D cell cultivation for prostate cancer research compared to matrices based on pure biomaterials or synthetic polymers.     

Anaerobic oxidation of alkanes by newly isolated denitrifying bacteria

The capacity of denitrifying bacteria for anaerobic utilization of saturated hydrocarbons (alkanes) was investigated with n-alkanes of various chain lengths and with crude oil in enrichment cultures containing nitrate as electron acceptor. Three distinct types of denitrifying bacteria were isolated in pure culture. A strain (HxN1) with oval-shaped, nonmotile cells originated from a denitrifying enrichment culture with crude oil and was isolated with n-hexane (C₆H₁₄). Another strain (OcN1) with slender, rod-shaped, motile cells was isolated from an enrichment culture with n-octane (C₈H₁₈). A third strain (HdN1) with oval, somewhat pleomorphic, partly motile cells originated from an enrichment culture with aliphatic mineral oil and was isolated with n-hexadecane (C₁₆H₃₄). Cells of hexane-utilizing strain HxN1 grew homogeneously in the growth medium and did not adhere to the alkane phase, in contrast to the two other strains. Quantification of substrate consumption and cell growth revealed the capacity for complete oxidation of alkanes under strictly anoxic conditions, with nitrate being reduced to dinitrogen. Received: 3 August / Accepted: 6 October 1999     

Pullulan content of the ethanol precipitate from fermented agro-industrial wastes

Ethanol-precipitated substances after fermentation of various agro-industrial wastes by Aureobasidium pullulans were examined for their pullulan content. Grape skin pulp extract, starch waste, olive oil waste effluents and molasses served as substrates for the fermentation. A glucose-based defined medium was used for comparison purposes. Samples were analysed by an enzyme-coupled assay method and by high-performance anion-exchange chromatography with pulsed amperometric detection after enzymic hydrolysis with pullulanase. Fermentation of grape skin pulp extract gave 22.3 g l⁻¹ ethanol precipitate, which was relatively pure pullulan (97.4% w/w) as assessed by the coupled-enzyme assay. Hydrolysed starch gave only 12.9 g l⁻¹ ethanol precipitate, which increased to 30.8 g l⁻¹ when the medium was supplemented with NH₄NO₃ and K₂HPO₄; this again was relatively pure pullulan (88.6% w/w). Molasses and olive oil wastes produced heterogeneous ethanol-precipitated substances containing small amounts of pullulan, even when supplemented with nitrogen and phosphate. Overall, grape skin pulp should be considered as the best substrate for pullulan production. Starch waste requires several hydrolyis steps to provide a usable carbon source, which reduces its economic attraction as an industrial process. Received: 24 October 1997 / Received revision: 10 February 1998 / Accepted: 15 February 1998     

Removal of CCA from treated wood by oxalic acid extraction, steam explosion, and bacterial fermentation

Most preservative-treated wood produced and consumed in the United States is treated with toxic inorganic compounds containing copper, chromium, and arsenic. Because chromated copper arsenate (CCA) is fixed to the wood, CCA-treated wood has not been considered toxic or hazardous and it is currently disposed of in approved landfills. Growing public concern about environmental contamination from treated wood combined with the removal of greater quantities of CCA-treated wood from service have presented a disposal challenge for this fiber source. In this study, CCA-treated wood was processed by acid extraction, steam explosion, and bacterial fermentation and evaluated for removal of copper, chromium, and arsenic. Copper was the easiest to remove by these treatments and chromium the most resistant to removal. Exposing CCA-treated wood to steady-state bacterial growth by continuous culture with Bacillus licheniformis CC01 did not enhance removal of CCA components compared to standard mixed culture when acid extraction preceded bacterial fermentation. Nor did steam explosion, alone or in conjunction with acid extraction and bacterial fermentation, enhance removal of CCA components; the chromium and arsenic components resisted removal. Grinding CCA-treated wood chips into 20-mesh sawdust provided greater access to and removal of CCA components by all processes. However, grinding the chips was unnecessary if they were treated with acid prior to bacterial fermentation. Extraction with oxalic acid as a precursor to bacterial fermentation with B. licheniformis CC01 removed 90% copper (CuO), 80% chromium (CrO₃), and 100% arsenic (As₂O₅) from treated chips. The combination of acid extraction and bacterial fermentation removed 80–100% of these metals from CCA-treated wood. Received 15 December 1997/ Accepted in revised form 08 March 1998     

Downstream processing of pullulan from fermentation broth

pullulan, a water soluble extracellular polysaccharide, was produced by downstream fermentation employing the strain Aureobasidium pullulans. To obtain pure biopolymer from the fermentation broth, it is necessary to harvest cells, heat the broth, remove the melanin pigments co-produced during fermentation, concentration, precipitate and dry. Centrifugation of the fermentation broth at 10,000 rpm for 15 min gave cell pellets that were discarded and a green–black supernatant containing melanin pigment was subjected to the heat treatment at 80 °C for 20 min in order to remove the protein in the fermentation broth. The supernatant was demelanized by oxidation with hydrogen peroxide, concentrated under vacuum, precipitated with ethanol and dried at 60 °C for 30 min. This procedure produced high purity pullulan that was comparable in color and texture to the commercial samples.     

Studies of the Cell Surface Properties of <Emphasis Type="Italic">Candida</Emphasis> Species and Relation to the Production of Biosurfactants for Environmental Applications

In practical bioremediation of petroleum pollution, treatment systems often use soil, sand, and other aquifer porous media besides water solutions. The distribution of the microbial cell also plays an important role in the whole process of bioremediation; therefore, the adhesion ability of cells to porous media is one of the key factors influencing the efficiency of treatment. The probable modes of hydrocarbon uptake in cells of Candida were studied based on data for cell hydrophobicity, emulsifying activity, surface tension, and interfacial tension of the cell-free culture medium. Six Candida strains were cultivated in insoluble and soluble substrates for 144 h, including n-hexadecane, soybean oil, ground-nut oil refinery residue, corn steep liquor, and glucose. The results obtained showed the potential of yeasts for application in the removal of hydrophobic compounds. Depending the strain and substrate used the adhesion ability of yeast cells and the production of surfactants and emulsifiers can take place simultaneously, thus increasing the efficiency of bioremediation treatment of petroleum pollution. The application of crude biosurfactants separated from the yeast cells was also demonstrated by tests of removal of petroleum and the derivate motor oil adsorbed in sand samples. Biosurfactants produced in low-cost medium were able to remove 90% of the hydrophobic contaminants.     

Enhancement of Hydrocarbon Removal in a Clay and Drilling-Waste Polluted Soil

The application of biological processes in restoring oil polluted sites is growing due to their efficiency in removing different classes of pollutants. The aim of this study was to determine the ability of microorganisms present in a drilling-waste polluted soil (36,200 mg TPH kg^?1 soil) to remove weathered hydrocarbons under stimulated and non-stimulated soil conditions. The hypothesis under study was whether petroleum hydrocarbons removal could be enhanced by manipulating C/N ratio, water content and addition of three agroindustrial wastes. A Box-Behnken design was employed to evaluate the effect of each variable. Results demonstrated that, for orange peels and banana trunk treatments, the variable with the largest effect (p < 0.01) on hydrocarbon removal was the C/N ratio, indicating that higher ratio (100/3) improved removal (79.5–82%). The largest effect (p < 0.001) on hydrocarbon removal for pineapple wastes was observed with higher water content (60%) achieving the highest removal (89%). After 90 days of experimentation, the type of agricultural waste and the agricultural waste/soil ratio were not statistically significant in any treatment. However, their addition was important relative to non-stimulated soil, which showed a hydrocarbon removal of 17%. Data reported in this study showed the application of bioremediation in clay and drilling waste-polluted soils.     

Removing of Crude Oil From Polluted Areas Using the Isolated Fungi From Tehran Oil Refinery

The pollution of soil and the subsurface environment by crude oil spill and petroleum products spill is a major concern around the world. The aim of this research was to investigate the ability of fungi isolated from Tehran oil refinery area in removing crude oil and to evaluate their enzymatic activities. Plant root samples were collected from the polluted and control areas, and rhizospheral fungi were isolated and determined using the laboratory methods and taxonomic keys. Seven fungal species were isolated and then cultured in potato dextrose agar (PDA) media containing 0–15% (v/v) crude oil. Oil removal was determined after a one-month growth of fungal colonies and then compared with the control media. The results showed that the studied fungi were able to remove crude oil from the media. The highest removal efficiency was observed in Aspergillus sp. Total protein content and enzymatic activity (of peroxidase and catalase) increased with increasing crude oil pollution. The highest enzymatic activity was evaluated in Aspergillus sp. growing in media containing 15% petroleum and the lowest activity was found in non-polluted groups. Results showed that there is a direct correlation between oil-removing potency and enzymatic activity. Aspergillus sp. showed the highest enzyme activity and also the highest petroleum removal efficiency.