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1.
Aureococcus anophagefferens Hargraves and Sieburth has caused recurring monospecific blooms in Long Island embayments since it was first described in 1985. It was termed the "brown tide," due to the resulting water color, and has had a devastating effect on Long Island's (New York) marine ecosystem. In 1992, a virus that was capable of causing lysis of A. anophagefferens was isolated and maintained in culture. We report on the further characterization of this virus, Aureococcus anophagefferens virus-1 (AaV-1), indicated by a buoyant density of 1.2776 g·mL−1 in a CsCl equilibrium gradient. Electron microscopy revealed a phage with a hexagonal head and tail similar to previously described phages. By using adenovirus for calibration, the virus was found to have a head 50—55 nm wide and a tail 70–75 nm long. The viral band was infectious to A. anophagefferens after dialysis. The virus was composed of at least 16 distinct polypeptides ranging in molecular weight from 20 to 230 kDa. The adsorption coefficient for the virus was 7.2 × 10−9 mL·min−1, and the burst size was calculated to be 9.4 viruses per A. anophagefferens cell at 20° C. Complete lysis of A. anophagefferens occurred with a titer as low as 893 viruses·mL−1, and the lower limit of infectivity was 93 viruses·mL−1. The virus lost its infectivity between 30° and 40° C. These results suggest that AaV-1 is highly infectious and that the role of the virus in preventing or ending A. anophagefferens blooms needs further investigation.  相似文献   

2.
以上海某些医院临床分离到的多重耐药肺炎克雷伯菌为宿主菌,从不同环境的污水中分离获得1株肺炎克雷伯菌噬菌体KP002。电子显微镜显示其为有尾噬菌体,头部直径约70nm,尾长约80nm,尾宽约20nm。对其生物学特性进行研究,结果显示此株噬菌体在pH 3~9及4~50℃的环境中具有较高活性;6min吸附率达95%以上;潜伏期为10min,爆发期为50min;裂解量为172pfu/cell。结果表明,该噬菌体对pH值和温度适应范围较宽。对其全基因组进行测序分析,结果显示其基因组为环状双链DNA,全长47 173bp,GC含量为48%。本研究筛选获得1株对pH值和温度适应范围较宽的耐药肺炎克雷伯菌烈性噬菌体KP002,为建立耐药肺炎克雷伯菌的噬菌体库以用于治疗临床多重耐药菌感染提供了新的思路。  相似文献   

3.
Bacteriophage B2 of Lactobacillus plantarum ATCC 8014, isolated in 1971, belonged to Bradley's group B. Electron microscopy revealed an isometric head (110 nm) and a long non-contractile and flexible tail (500 nm) containing about 75 regularly aligned lateral striations. Burst size was 12-14 phages per infectious centre. The latent period for phage development was 75 min and the rise period approximately 90 min. The phage particle contained 5 major proteins. The buoyant density of the phage in CsCl was measured as 1.575 g/cm3. B2 genome was a linear double-stranded DNA molecule of 37 +/- 1% guanosine-cytosine. Its size was 73 kilobase pairs (kbp). Restriction analysis of the genome showed that 4 restriction enzymes (Xba I, Sac I, Bgl II and Sma I) gave single site cuts in the DNA, while Ava I and Sal I formed 2 and 5 cuts, respectively.  相似文献   

4.
Abstract: The rates of ingestion of bacteria and of accumulation of bacterial biomass by hungry Pteridomonas danica and Paraphysomonas imperforata were measured using dual radioactive-labelled bacteria in experiments lasting 4–8 h. Pteridomonas continuously consumed 4–5 bacteria h−1 throughout experiments lasting 8 h, irrespective of bacterial concentration above a threshold of about 5 × 105 bacteria ml−1, and continued to catch bacteria even below this density. The clearance rate of about 1 nl cell−1 h−1 at higher bacterial concentrations increased three or four times as bacterial numbers fell. Paraphysomonas cells, with only half the biomass of Pteridomonas , ingested up to 10 bacteria h−1 at high bacterial concentrations, and gradually reduced the feeding rate, effectively ceasing to feed at 106 bacteria ml−1; their initial clearance rate of 1–2.5 nl cell−1 h−1 subsequently fell as low as 0.1 nl cell−1 h−1. Estimation of feeding rate by extrapolation from short-term experiments on such flagellates requires extreme caution. These flagellates, starved to levels typical of the natural environment, accumulated ingested bacterial biomass at an efficiency of between 16 and 21%, indicating that in nature they would recycle 80% or more of the nutrients contained in their food.  相似文献   

5.
Morphological characterization of a bacteriophage isolated from the Lactobacillus plantarum portion of a commercial meat starter culture showed that the isolate, phage fri, belonged to the Bradley group A bacteriophages. It had a regular six-sided head (90 nm diameter), and a contractile tail (190 nm in length). Short tail fibres were observed at the distal end of the sheath. Fluorescent staining with acridine orange indicated that phage fri contained double-stranded DNA. The resistance to high concentrations of either chloroform or ether showed that its lipid content was negligible. Heat lability was demonstrated by inactivation of a phage fri population within 10 min at 60°C and within 5 min at 70°C. It tolerated pH levels of 3.0–8.0 and exhibited greater stability in the acid region than did its host strain. The latent and rise periods were both 75 min, and the average burst size 200 pfu/cell. Sensitivity was limited to the Lact. plantarum strain of only one manufacturer of the commercial meat starters investigated.  相似文献   

6.
A species-specific 16S rRNA oligonucleotide probe (ASRB1) was developed for the detection of Desulforhabdus amnigenus in anaerobic granular sludge. The presence of nucleic acids from cells of D. amnigenus in granular sludge was determined using ASRB1 as a specific primer for polymerase chain reaction (PCR) amplification or as a probe for dot blot hybridizations. The detection threshold and the reproducibility of these two methods were determined with sludge amended with 104–1010 D. amnigenus cells per gram of volatile suspended solids (VSS). For D. amnigenus cells with a ribosomal RNA content of 15 fg cell−1, the lowest number of target cells detected by hybridization was 1 × 108 cells g−1 VSS. With the PCR amplification method the lowest number of target cells which could be detected was 1 × 107 g−1 VSS. This corresponds to a threshold level for hybridization of 0·1–0·001‰ of the total bacterial sludge population, while the threshold level obtained with the PCR approach amounted to 0·01–0·0001‰. The rRNA content of D. amnigenus was found to be affected by the growth rate and the growth phase, and it ranged from 19 fg cell−1 in slow-growing cultures to 90 fg cell−1 in fast-growing cultures. Therefore, the detection threshold of the dot blot hybridization method for fast-growing cells is lower than for slow-growing cells.  相似文献   

7.
Lowering of the osmotic value of the medium has been reported previously to induce an oxidative burst in plant cells. This has been explained by a sequence of events, including solute influx, cellular swelling and the activation of stretch-regulated channels, triggering the production of reactive oxygen species. Moreover, it is known that the plant growth hormone auxin induces protoplast swelling. Together, these findings prompted the hypothesis that plant cells can respond to auxin-treatment with an oxidative burst. We tested this hypothesis using suspension cultured cells from Chenopodium rubrum L. and 2,7-dichlorodihydrofluorescein as the indicator for reactive oxygen species. An auxin-induced oxidative burst was found similar to an osmotically induced burst. Osmotic treatment consisted of a shift from 110 mOsm to 40 mOsm. The naturally occurring halogenated auxin 4-chloroindole-3-acetic acid was the most active compound tested, giving maximum rates of indicator oxidation corresponding to the formation of 4 x 10−15 mol H2O2 cell−1 min−1. Auxin analogous (10 μ M ) exhibited the following order of effectiveness: 4-chloride indoleacetic acid (100%), indoleacetic acid (80%), 2,4-dichlorophenoxyacetic acid (75%), 2-naphthylacetic acid (52%) and 1-naphthylacetic acid (47%). Benzoic acid (23%) was used as a control. Fusicoccin (35%) showed only slight stimulation in conjunction with complex kinetics. The detection of oxidative burst responses to 10 n M indoleacetic acid revealed a high sensitivity of the assay for auxin. Cell-free medium from aged batch cultures and light were also found to stimulate the production of reactive oxygen species. These data indicate that reactive oxygen species can transduce and integrate developmental and environmental signals and thus play a general role in plant growth regulation.  相似文献   

8.
Large Pseudomonas phages isolated from barley rhizosphere   总被引:1,自引:0,他引:1  
Abstract: Five bacteriophages infecting common fluorescent pseudomonads ( Pseudomonas fluorescens and Pseudomonas putida ) were isolated from barley rhizosphere soil. Morphological and molecular characteristics of the phages are described together with selected phage-host interactions. All phages belonged to the Myoviridae family with isometrical heads on contractile tails; 4 of them were unusually large and had complex protein and DNA profiles. The large phages had estimated genome sizes of 200 kb or more. Restriction enzyme analyses and DNA-DNA hybridizations showed that all isolates represented different phage species. None of the isolates were observed to establish lysogeny with the main host strain, P. putida MM1. The large phages multiplied slowly on their hosts, producing very small plaques; one-step growth experiments with one of the large phages (Psp 4) hence demonstrated a long latent period (2.5 h) and a very small burst size (10 particles). One of the large phages (Psp 3) was abundant in the rhizosphere (approx. 104 pfu g−1 soil) and had a particularly broad host range which extended to both fluorescent ( Pseudomonas aeruginosa, P. fluorescens, P. putida and Pseudomonas chlororaphis ) and non-fluorescent (Pseudomonas stutzeri) Pseudomonas spp. occurring in soil. The ecological importance of the large Pseudomonas phages must be further studied, but their slow multiplication rates suggested a possible mechanism of balanced phage-host co-existence in the rhizosphere.  相似文献   

9.
Abstract Bradyrhizobium japonicum and Shewanella putrefaciens were unable to oxidize hydrogen at atmospheric concentrations (0.55 ppmv), neither in suspension nor when added to sterile soil. The K m-value of S. putrefaciens for H2 (39 ppmv in gas phase, 0.22 μM in aqueous phase), using Fe(III) as electron acceptor, showed a 4–5-fold higher affinity for H2 than that of B. japonicum (1200 ppmv; 0.84 μM) or other hydrogen-oxidizing bacteria. However, the V max (4.54 fmol H2 h−1 cell −1) and threshold (> 0.5 ppmv; 0.35 nM) of S. putrefaciens and the V max (7.19 fmol H2 h−1 cell−1) and threshold (> 0.5 ppmv; 0.35 nM) of B. japonicum were in the same order of magnitude as data for Knallgas bacteria from relevant literature. To enable hydrogen oxidation in soil the soil-samples with S. putrefaciens even had to be supplemented with Fe(III). Fresh soil, on the other hand, oxidized hydrogen very efficiently below atmospheric mixing ratios, demonstrating that there must be other oxidation activities in soil.  相似文献   

10.
Characterization of the adsorption process by the phages hv and ATCC 15807-B1 to Lactobacillus helveticus ATCC 15807 was carried out. For this purpose, the influence of Ca2+ ions, temperature and physiological cell state were studied. The ability of several saccharides and related compounds to inactivate the phages hv and ATCC 15807-B1 was determined to investigate their potential role as phage receptors. Furthermore, several chemical treatments on the sensitive strain cells were carried out to study their influence on phage adsorption. Cell lysis and plaque formation were independent of Ca2+ ions for phage hv, but the cation was indispensable for completion of the lytic cycle of phage ATCC 15807-B1. However, for this phage, Ca2+ was not necessary for the adsorption process. The adsorption rates were almost normal for both phages within the temperature range examined (0 – 50 °C) and the adsorption kinetics were practically identical on viable and non-viable cells. The saccharides and related compounds used did not produce inactivation of the phages, suggesting that they were not essential components of phage receptor structures. Lactobacillus helveticus ATCC 15807 cells treated with SDS 1%, SDS 0·5% -EDTA 50 mmol l−1 or NaOH 50 mmol l−1 exhibited reduced adsorption of the phages, indicating possible damage or extraction of receptors from the cell wall. Phage adsorption presents an extremely attractive target for interfering in the lytic cycle of phages.  相似文献   

11.
Abstract Batch mating experiments were employed to study the kinetics of the conjugal transfer of a TOL plasmid, using the transconjugant strain Pseudomonas aeruginosa PAO 1162 (TOL) as the plasmid donor and Pseudomonas putida PB 2442 and Pseudomonas aeruginosa PAO 1162N as the plasmid recipients. Transfer rates from PAO 1162 (TOL) to PAO 1162N and PB 2442 measured for exponentially grown PAO 1162 (TOL) were 1.81 × 10−14 (standard error (S.E.) 1.25 × 10−15) ml·cell−1min−1 and 3.32 × 10−13 (S.E. 4.42 × 10−14) ml·cell−1min−1, respectively. The instability of the TOL plasmid in PAO 1162 (TOL) was evaluated under conditions that were non-selective for maintenance of the TOL catabolic functions. The measured rates of instability were 6.7 10−6 to 8.3 10−6 min−1, and the loss of the catabolic functions was mainly caused by structural instability of the plasmid.  相似文献   

12.
Greene  R. M.  Walker  C.C.  Murrell  M.C.  Kurtz  J.C.  Stanley  R.S.  & Genthner  F.J. 《Journal of phycology》2000,36(S3):25-26
Blooms of the dinoflagellate Gymnodinium breve (i.e. red tides) produce brevetoxins (PbTx) that negatively impact the Gulf of Mexico ecosystem, human health, and local economies. Characterizing and predicting bloom events and their impacts requires knowledge of G. breve abundance and PbTx concentrations in the water column. We report results from a bloom that occurred during the fall and winter of 1999 in NW Florida coastal waters. Data were collected from 16 stations on 3 sampling dates (29 Sept., 9 Nov., 1 Dec.), including basic hydrography, nutrient concentrations, G. breve abundances, and brevetoxin concentrations. G. breve cells were enumerated using flow cytometry and PbTx's were isolated from seawater using dichloromethane (DCM) partitioning. Brevetoxins were quantified by HPLC-DAD using a C-18 column and an acetonitrile-water gradient elution. Literature estimates of total PbTx concentration (PbTx's 1, 2, 3) of cultured and field-collected G. breve suggest a range in concentration from 7 to 17 pg cell−1. We measured total PbTx levels that greatly exceeded these values [Sept., 47–67 pg cell−1 (n=5); Nov., 59–126 pg cell−1 (n=3), Dec., 12–63 pg cell−1 (n=8)]. PbTx-2 was the predominant (67–75%) PbTx isomer found in these blooms. PbTx-1 and PbTx-3 were found at 11–22% and ND–28% of total PbTx, respectively.  相似文献   

13.
The effect of acetate on growth and rate of ammonium uptake in Scenedesmus obliquus (UTEX 78) was investigated under light-limiting conditions. Addition of acetate to autotrophic cells with a growth constant of 0.71 day−1 resulted in an increase in the growth rate (mixotrophy, k = 1.3 day−1), and in the presence of acetate, growth occurred in the dark (heterophy, k = 0.44 day−1). The rate of ammonium uptake in autotrophy (17.8 amol cell−1 min−1) was similar to that in heterotrophy (17.4 amol cell−1 min−1) but was 3.7 times lower than that in mixotrophy (65.9 amol cell−1 min−1). In general, mixotrophic cells showed optimum ammonium uptake at the acetate concentration at which they were grown. In autotrophy, uptake of ammonium leveled off at about 12.5 μ M while no saturation was observed in mixotrophic cells. An increase in the rate of uptake of ammonium was observed in autotrophic cells within 1 h after the addition of acetate. The activity of isocitrate lyase (EC 4.1.3.1), a key enzyme for the regulation of the glyoxylate cycle responsible for acetate catabolism, showed a 3.9-fold increase in activity after 24 h in the dark in the presence of acetate. The level of isocitrate lyase activity in cells grown for 24 h in the dark in the presence of 0–20 m M acetate also increased as a function of acetate concentration.  相似文献   

14.
SUMMARY 1. Grazing and photosynthetic contributions to the carbon balance of planktonic, mixotrophic cryptophytes in Lakes Fryxell and Hoare in the Taylor Valley, Antarctica were measured during November and December 2000.
2. The cryptophytes never became entirely photosynthetic, although carbon derived from grazing decreased in December. Individual grazing rates ranged between 5.28 and 10.08 bacteria cell−1 day−1 in Lake Fryxell and 0.36–11.76 bacteria cell−1 day−1 in Lake Hoare. Grazing rates varied temporally and with depth in the water column. In Lake Fryxell, which is a meromictic lake, highest grazing occurred just above the chemocline. Individual photosynthetic rates ranged from 0.23 to 1.35 pg C cell−1 h−1 in Lake Fryxell and 0.074 to 1.08 pg C cell−1 h−1 in Lake Hoare.
3. Carbon acquisition by the cryptophyte community gained through grazing ranged between 8 and 31% during November in Lake Fryxell, dropping to between 2 and 24% in December. In Lake Hoare grazing contributed 12–21% of the community carbon budget in November and 1–28% in December. Around 4% of the carbon acquired from grazing and photosynthesis was remineralised through respiration.
4. Mixotrophy is probably a major survival strategy for cryptophytes in the extreme lakes of the Dry Valleys, because perennial ice-cover severely limits light penetration to the water column, whereas these phytoflagellates are not normally mixotrophic in lower latitude lakes. The evidence suggests that mixotrophy may be a mechanism for supplementing the carbon budget, as well as a means of acquiring nutrients for growth.  相似文献   

15.
Structural organization of the temperate bacteriophage ZF40 of Erwinia carotovora was studied. Phage ZF40 proved to be a typical member of the Myoviridae family (morphotype A1). Phage particles consist of an isometric head 58.3 nm in diameter and a contractile 86.3-nm-long tail with a complex basal plate and short tail fibers (31.5 nm). Phage tail sheath, a truncated cone in shape, is characterized by specific packaging of structural subunits. The ZF40 phage genome is 45.8 kb in size, as determined by restriction analysis, and contains DNA cohesive ends. The ZF40 phage of Erwinia carotovora is assumed to be a new species of bacteriophages specific for enterobacteria.  相似文献   

16.
1. The ingestion rates of planktonic, mixotrophic cryptophytes in two perennially ice-covered Antarctic lakes in the McMurdo Dry Valleys, were investigated during the summer of 1997–1998.
2. In Lake Fryxell, which is meromictic, ingestion rates increased with depth in November and were highest in a cryptophyte maximum close to the chemocline. In Lake Hoare, which is unstratified and freshwater, there was no significant difference in ingestion rates with depth. In both lakes, the highest ingestion rates occurred in early summer, decreasing in December and January. Ingestion rates varied between 0.2 bacteria cell−1 h−1 and 3.6 bacteria cell−1 h−1.
3. During November, mixotrophic cryptophytes removed up to 13% of bacterial biomass day−1 and had a greater grazing impact than heterotrophic nanoflagellates (HNAN). As summer progressed, the grazing impact of cryptophytes and HNAN became similar.
4. The maximum depth of cryptophytes in Lake Fryxell was predated by a population of the ciliate Plagiocampa. Plagiocampa had an ingestion rate of 0.13–0.19 cryptophytes cell−1 h−1. The grazing impact on the cryptophyte community was insignificant. However, the ciliate appeared to be indulging in temporary mixotrophy, sequestering the cryptophytes for a number of weeks before digesting them.
5. It is suggested that mixotrophy is an important survival strategy in the extreme lake ecosystems of the McMurdo Dry Valleys.  相似文献   

17.
Properties of a virulent Brevibacterium flavum bacteriophage phi BSh6 were studied. The phage was placed in morphological group B1 according to Ackerman classification, head diameter being 74-3 nm, tail length being 337 +/- 15 nm. The phage was shown to have double stranded DNA as a genetic material. The chromosome is linear having cohesive ends. Chromosome length was estimated to be about 71 kbp by restriction analysis and electron microscopy. A unique EcoRI-EcoRI fragment of bacteriophage DNA (0.8 kbp) was cloned in Escherichia coli. Restriction chart of cos region was determined, the dyad symmetry being absent from cos sequence. Deletion mutant of the phage was obtained and restriction map of the corresponding genome region was constructed. The phage phi BSh6 was shown to be a close relative to phages phi B and BB14 described earlier.  相似文献   

18.
Tovkach  F. I. 《Microbiology》2002,71(1):65-71
Structural organization of the temperate bacteriophage ZF40 of Erwinia carotovora was studied. Phage ZF40 proved to be a typical member of the Myoviridae family (morphotype A1). Phage particles consist of an isometric head 58.3 nm in diameter and a contractile 86.3-nm-long tail with a complex basal plate and short tail fibers (31.5 nm). Phage tail sheath, a truncated cone in shape, is characterized by specific packaging of structural subunits. The ZF40 phage genome is 45.8 kb in size, as determined by restriction analysis, and contains DNA cohesive ends. The ZF40 phage ofErwinia carotovora is assumed to be a new species of bacteriophages specific for enterobacteria.  相似文献   

19.
AIMS: Three indigenous Lactobacillus delbrueckii subsp. bulgaricus bacteriophages and their adsorption process were characterized. METHODS AND RESULTS: Phages belonged to Bradley's group B or the Siphoviridae family (morphotype B1). They showed low burst size and short latent periods. A remarkably high sensitivity to pH was also demonstrated. Indigenous phage genomes were linear and double-stranded DNA molecules of approx. 31-34 kbp, with distinctive restriction patterns. Only one phage genome appeared to contain cohesive ends. Calcium ions did not influence phage adsorption, but it was necessary to accelerate cell lysis and improve plaque formation. The adsorption kinetics were similar on viable and nonviable cells, and the adsorption rates were high between 0 and 50 degrees C. SDS and proteinase K treatments did not influence the phage adsorption but mutanolysin and TCA reduced it appreciably. No significant inhibitory effect on phage adsorption was observed for the saccharides tested. This study also revealed the irreversibility of phage adsorption to their hosts. CONCLUSIONS, SIGNIFICANCE AND IMPACT OF THE STUDY: The study increases the knowledge on phages of thermophilic lactic acid bacteria.  相似文献   

20.
Abstract Infectious phage particles can be formed in vitro when extracts of T1-infected cells are incubated with T1 DNA. The DNA packaging system is based on mixtures of complementing extracts from Escherichia coli sup0 cells infected with the amber mutants am 4 (gene 16) or am 10 (gene 13). Gene 16 mutants are defective in the formation of DNA-filled heads but make proheads; gene 13 mutants are defective in prohead formation. Three forms of DNA have been packaged: (1) endogenous concatemeric DNA present in mixtures of am 4 and am 10 mutant extracts; (2) concatemeric DNA; (3) virion DNA both when supplied exogenously to mixtures of am 4 · am 20 and am 10 · am 20 double mutant extracts ( am 20 inhibits T1 DNA synthesis). The reaction requires added ATP, Mg2+ and spermidine for optimum efficiency and produces about 1.5 × 103 pfu/ μ g and about 1 × 104 pfu/ μ g for exogenous concatemeric and virion DNA, respectively.  相似文献   

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