Using spectral analysis to confront distributions of individual species with an overall periodic pattern in semi-arid vegetation

Contrasted and periodic vegetation patterns are observed throughout thesemi-arid tropics. The relation between individual species and theoverall pattern has been investigated from a study site in NorthWest Burkina Faso (West Africa), which displayed periodic woody patterns withvarying levels of contrast and isotropy. The woody vegetation was described fromtwo field plots (320 by 320 ), within which woodyindividuals were either mapped or counted (in quadrats of 10 by10 ). A banded pattern of high intensity (tiger bush on hardsandstone, plot PTG) was compared with a less precise pattern on more favourableedaphic conditions (plot PSP). The periodic nature of the vegetation under studywas directly addressed by interpreting spatial auto- and cross-covariancefunctions through spectra of spatial frequencies (spectral analysis). Theoverall pattern of vegetation was analysed from digitised aerial photographs,while distributions of individual species were characterised from field data. Inboth plots, the densest species (Combretum micranthum G.Don), though only dominant in PTG, had a spatial distribution that closelymatched the overall pattern. Pterocarpus lucens Lepr wasco-dominant in both plots although fairly independent on the periodic pattern.Several species displayed a positive link with the periodic pattern that wasquite loose in PSP and tighter in PTG. This tighter link was concomitant withlower densities for most species. Indeed, only C.micranthum clearly benefited from the high intensity pattern with adensity seven times higher in PTG than in PSP. Consequently, species richnessand diversity were lower in PTG. A single species proved hence of overwhelmingimportance in accounting for the periodic pattern and its persistence throughtime. Spatial distributions of other species pointed rather towardsindividualistic responses to the opportunity/constraint provided by theperiodic pattern in presence of different levels of edaphic and climatic stress.     

The toxicity of cadmium to barley plants as affected by complex formation with humic acid

An ‘alternating solution’ culture method was used to study the effects of chloride ions and humic acid (HA) on the uptake of cadmium by barley plants. The plants were transferred periodically between a nutrient solution and a test solution containing one of four levels of HA (0, 190, 569 or 1710 μg cm⁻³) and one of five levels of Cd (0, 0.5, 1.0, 2.5 or 5.0 μg cm⁻³) in either a 0.006M NaNO₃ or 0.006M NaCl medium. Harvest and analysis of shoots and roots was after nineteen days. The distribution of Cd in the test solutions between Cd²⁺, CdCl⁺ and HA-Cd was determined in a separate experiment by dialysis equilibrium. In the nitrate test solutions Cd uptake was clearly controlled by Cd²⁺ concentration and was therefore reduced by HA complex formation. In the absence of HA, chloride suppressed Cd uptake indicating that Cd²⁺ was the preferred species. However complex formation with Cl⁻ enhanced uptake when HA was present because of an increase in the concentration of inorganic Cd species relative to the nitrate system. The ratio root-Cd/shoot-Cd remained at about 10 across a wide range of shoot-Cd concentrations, from about 3 μg g⁻¹ (sub-toxic) up to 85 μg g⁻¹ (80% yield reduction). The ability of the barley plants to accumulate ‘non-toxic’ Cd in their roots was thus very limited. Humic acid also had no effect on Cd translocation within the plant and the root/shoot weight ratio did not vary with any treatment. At shoot-Cd concentrations in excess of 50 μg g⁻¹, K, Ca, Cu and Zn uptake was reduced, probably the result of root damage rather than a specific ion antagonism. The highest concentration of HA also lowered Fe and Zn uptake and there was a toxic effect with increasing HA concentration at Cd=0. However the lowest HA level, comparable with concentrations found in mineral soil solutions, only reduced yield (in the absence of Cd) by <5% while lowering Cd uptake across the range of Cd concentrations by 66%–25%.     

Lipid composition of pine needle chloroplasts and apple bark tissue as affected by growth temperature and daylength changes. 1. Phospholipids

Phospholipid (PL) and fatty acid composition of chloroplasts of pine needles ( Pinus sylvestris L.) and apple bark tissue ( Malus sylvestris Mill. cv. Golden Delicious) was determined in a series of experiments in which growth temperature and daylength were changed. Trees were exposed to 0 and 20°C and to daylength conditions of 9 and 14 h. All 16 possible combinations were investigated by transfer of the trees from the original condition to each of the other conditions. There was no direct relation between cold hardiness and PL composition in apple bark and pine chloroplasts, when temperature and/or daylength were changed. PL composition seemed to be strongly determined by the sequence of the imposed sets of daylength and temperature. The effect of these environmental factors on PL composition strongly differed from that for cold hardiness. The correlation between the levels of PL (and phosphatidylcholine) and cold hardiness, as reported in the literature, was also evident in this experiment, when treatments, presenting the normal seasonal order, were compared. It seems that the yearly cycle of temperature and daylength is important in determining the PL composition of apple bark and pine chloroplasts.     

Bulk soil pH and rhizosphere pH of peach trees in calcareous and alkaline soils as affected by the form of nitrogen fertilizers

One-year old nectarine trees [Prunus persica, Batsch var. nectarina (Ait.) Maxim.], cv Nectaross grafted on P.S.B2 peach seedlings [Prunus persica (L.) Batsch] were grown for five months in 4-litre pots filled with two alkaline soils, one of which was also calcareous. Soils were regularly subjected to fertigation with either ammonium sulphate or calcium nitrate providing a total of 550 mg N/tree. Trees were also grown in such soils receiving only deionized water, as controls. Rhizosphere pH, measured by the use of a microelectrode inserted in agar sheet containing a bromocresol purple as pH indicator and placed on selected roots, was decreased by about 2–3 units compared to the bulk soil pH in all treatments. This decrease was slightly less marked when plants were supplied with calcium nitrate rather than ammonium sulphate or control. Measurements conducted during the course of the experiment indicated that ammonium concentration was similar in the solution of soils receiving the two N fertilizers. During the experiment, soil solution nitrate-N averaged 115 mg L^–1 in soil fertilized with calcium nitrate, 68 mg L^–1 in those receiving ammonium sulphate and 1 mg L^–1 in control soils. At the end of the experiment nitrate concentrations were similar in soils receiving the two N sources and bulk soil pH was decreased by about 0.4 units by ammonium sulphate fertigation: these evidences suggest a rapid soil nitriflcation activity of added ammonium. Symptoms of interveinal chlorosis in apical leaves appeared during the course of the experiment in trees planted in the alkaline-calcareous soil when calcium nitrate was added. The slightly higher rhizosphere pH for calcium nitrate-fed plants may have contributed to this. The findings suggest that using ammonium sulphate in a liquid form (e.g. by fertigation) in high-pH soils leads to their acidification and the micronutrient availability may be improved.     

Freezing pattern in apple seeds as affected by the temperature of fruit storage

Storage of apple fruits ( Pyrus malus L. cv. Golden Delicious) at different temperatures (0, 12 and 35°C) markedly altered the pattern of water freezing in the seeds. Higher temperatures of storage brought about a shift from the sequential to the discontinuous type of freezing in seeds, the low temperature exotherm (LTE) being much more pronounced than the high temperature one (HTE). The occurrence of LTE was highly correlated with embryo death. Fruit storage at higher temperatures also caused a decrease in the threshold super cooling temperature of seeds and of naked embryos, removed from the seed coat and endosperm. The decrease was less pronounced in naked embryos than in intact seeds. The results presented show that the frost resistance of apple seeds relies mainly on the supercooling ability of the embryos and is increased by the presence of seed coat and endosperm. The broad peak of the LTE indicates that, in contrast with other seeds and many super cooling organs, massive ice nucleation in apple seeds occurs within the embryo tissues and that extra organ freezing seems to be of less importance. Therefore, the increased super cooling ability of apple seeds, isolated from fruits stored at higher temperatures, seems to rely on those seed properties that protect embryo cells against heterogeneous ice nucleation.     

Yield and quality of rockwool-grown tomatoes as affected by variations in EC-value and climatic conditions

Tomato (Solanum lycopersicon esculentum L.) was grown on rockwool at different EC-regimes. The experiments were carried out under different climatic conditions. The EC-regimes were realized by varying the quantities of nutrient elements supplied. The ratios between the elements were kept constant.The maximum value of the EC in the root environment at which no yield depression occurred was about 2.5 dS.m^–1 at 25°C. Higher EC-values decreased the yield with 5 to 7% per dS.m^–1. However, a decrease of 10% was found in an experiment with a very high humidity level. High EC-values under poor light conditions did not affect yields adversely to any extent. It could therefore be concluded that in calculations of EC-induced yield reductions from data of experiments with varying EC-values, both the lengths of the EC-intervals and the light intensity during the intervals have to be taken into account.Fruit quality was improved by increased EC-values. Potassium contents in the leaves were increased and calcium and magnesium contents were decreased. The effect on the nitrate and the phosphate contents was different for young and old leaves.     

The burial of organic carbon as affected by the evolution of land plants

It is hypothesized that, over Phanerozoic time, the terrigenous organic carbon (_orgC) pool became increasingly susceptible to biological decay through (a) reduction in the ratio of phenolic‐rich periderm to total biomass and (b) decline in the extent of lignification in foliage and other plant organs. Fungal evolution, meanwhile, resulted in greater abundance and higher activity levels of lignin‐degrading organisms, and faster turnover of refractory _orgC. The result was reduced burial of _orgC, which, in turn, checked the accumulation of O₂ in the atmosphere and buffered the global redox balance against variation in biomass production by land plants. Feedback from O₂ level to fungal metabolism of lignin further stabilized the system. Thus, the relatively small Paleozoic land biota could have caused much greater perturbations of redox balance than were caused by the much larger and more productive land biotas of the Tertiary.     

Nitrogen metabolism of Douglas fir and Scots pine as affected by optimal nutrition and water supply under conditions of relatively high atmospheric nitrogen deposition

Nitrogen metabolism of the needles of 40-year-old Douglas fir and Scots pine trees, growing in two forest stands on cation-poor and acidic sandy soil with a relatively high atmospheric nitrogen deposition was studied. The composition of the free amino acid (FAA) pool, the concentrations of total nitrogen and soluble protein and the activities of glutamine synthetase (GS) and glutamate dehydrogenase (GDH) were determined in the needles. An excessive nitrogen supply by a high atmospheric nitrogen deposition in both forest stands was indicated by the high concentrations of total nitrogen and the amino acids arginine, glutamic acid, glutamine and aspartic acid in control trees. In addition the effect of optimal nutrition and water supply (fertigation) on the needle nitrogen metabolism was evaluated. The total concentration of the FAA pool in needles of both tree species was lower in the fertigated than in the non-fertigated (control) trees, except for 1-year-old needles of Scots pine, in which the concentration after fertigation did not differ from the control. The lower total FAA concentration in the fertigated trees could be attributed to arginine, the concentration of which was on average 60% lower than in the control. Neither the concentration of soluble protein nor the activity of GS were influenced by fertigation. The activity of GDH in fertigated trees only differed significantly from the control in October. Scots pine needles had higher concentrations of protein (50%) and higher activities of GS (44%) and GDH (25%) than Douglas fir needles. Possible explanations for the lower vitality of Douglas fir compared to Scots pine are given.     

The absorption and transport of manganese by perennial ryegrass and white clover as affected by silicon

Summary The effects of added silicon on the absorption and transport of manganese in perennial ryegrass (an accumulator of Si) were determined and compared with those found in white clover (which has restricted Si uptake). The plants were grown in flowing solution culture in two experiments with Si in the nutrient solution maintained at 0, 10 or 20 mgl⁻¹ and Mn at 0.005 mgl⁻¹. By the final harvests, the plants contained concentrations of both Mn and Si that were comparable to those found in field-grown plants. In common with other findings, white clover had very much lower concentrations of Si in both shoots and roots than did ryegrass but there was no effect of Si treatment on the growth of either species. In both species, the concentrations of Mn were initially greater in roots than in shoots, but values in both plant parts decreased with time and by the final harvests, were similar. The rates of absorption of Mn by roots and its subsequent transport to shoots were also similar in both species. In contrast to findings for other species in other studies based on conventional solution culture, there was no effect of added Si on either absorption or transport of Mn in clover or ryegrass. It was therefore concluded that any effect of Si on the behaviour of Mn in plants must result from changes in distribution and partitioning within leaf tissues and cells.     

Channel opening motion of alpha7 nicotinic acetylcholine receptor as suggested by normal mode analysis

The gating motion of the human nicotinic acetylcholine receptor (nAChR) alpha7 was investigated with normal mode analysis (NMA) of two homology models. The first model, referred to as model I, was built from both the Lymnaea stagnalis acetylcholine binding protein (AChBP) and the transmembrane (TM) domain of the Torpedo marmorata nAChR. The second model, referred to as model C, was based solely on the recent electron microscopy structure of the T. marmorata nAChR. Despite structural differences, both models exhibit nearly identical patterns of flexibility and correlated motions. In addition, both models show a similar global twisting motion that may represent channel gating. The similar results obtained for the two models indicate that NMA is most sensitive to the contact topology of the structure rather than its finer detail. The major difference between the low-frequency motions sampled for the two models is that a symmetrical pore-breathing motion, favoring channel opening, is present as the second most dominant motion in model I, whilst largely absent from model C. The absence of this mode in model C can be attributed to its less symmetrical architecture. Finally, as a further goal of the present study, an approximate open channel model, consistent with many experimental findings, has been produced.     

Fine root production and carbohydrate concentrations of mature longleaf pine (Pinus palustris P. Mill.) as affected by season of prescribed fire and drought

The historical range of longleaf pine (Pinus palustris P. Mill) has been greatly reduced, in part, by lack of fire. Recently, the application of fire has become an accepted practice for the restoration of longleaf pine to former parts of its natural range. This study was designed to evaluate the effects of season of prescribed fire on the root growth and nonstructural carbohydrate concentrations of longleaf pine, and identify the time of year when fire has the least negative effect on longleaf pine root processes. We found that root growth was generally less on July-burned plots than on either March- or May-burned plots and we attribute these responses to the effect of fire on interaction between root processes and the soil environment. Specifically, soil water and temperature conditions may have been less favorable for root growth on the July-burned plots compared to the March- and May-burned plots. With two years of information on the seasonal dynamics of foliage production, root growth, and root carbohydrates, we determined that at our study site, optimal prescribed fire would impact tree growth less in November through March compared to other times of the year. We also observed that severe drought during the 1998 growing season was associated with a 3-month delay in peak root growth, and prolonged drought in 1999 through 2000 coincided with a reduction in root starch storage. We conclude that season of prescribed fire potentially affects root processes, but that severe or prolonged drought may either interact with or override these effects.     

The founding of Mauritian endemic coffee trees by a synchronous long‐distance dispersal event

The stochastic process of long‐distance dispersal is the exclusive means by which plants colonize oceanic islands. Baker's rule posits that self‐incompatible plant lineages are unlikely to successfully colonize oceanic islands because they must achieve a coordinated long‐distance dispersal of sufficiently numerous individuals to establish an outcrossing founder population. Here, we show for the first time that Mauritian Coffea species are self‐incompatible and thus represent an exception to Baker's rule. The genus Coffea (Rubiaceae) is composed of approximately 124 species with a paleotropical distribution. Phylogenetic evidence strongly supports a single colonization of the oceanic island of Mauritius from either Madagascar or Africa. We employ Bayesian divergence time analyses to show that the colonization of Mauritius was not a recent event. We genotype S‐RNase alleles from Mauritian endemic Coffea, and using S‐allele gene genealogies, we show that the Mauritian allelic diversity is confined to just seven deeply divergent Coffea S‐RNase allelic lineages. Based on these data, we developed an individual‐based model and performed a simulation study to estimate the most likely number of founding individuals involved in the colonization of Mauritius. Our simulations show that to explain the observed S‐RNase allelic diversity, the founding population was likely composed of fewer than 31 seeds that were likely synchronously dispersed from an ancestral mainland species.     

The morphological changes of wheat genotypes as affected by the levels of localized phosphate supply

Effects of localized phosphate supply on the seedling growth of wheat (Triticum aestivum L.) genotypes 81(85)5-3-3-3 (P-efficient) and NC37 (P-inefficient) were studied using a device which allowed only 3 cm length of root segment to be exposed to phosphate treatment. Localized supply of 0 mmol P L^–1 and the rest of root supplied with 0.1 mmol P L^–1 (HLH), increased the shoot height, leaf area, root/shoot ratio for 81(85)5-3-3-3, length of root and root axis for NC37, and root axis length and density of first-laterals for both the genotypes, compared to plants with the whole root system in P-sufficient solution (HHH). This suggested that above- and below-ground morphological parameters of wheat were promoted by a localized P-deficiency, presumably via a P deficiency signal. There was a significant difference in the number of first-order laterals between the two wheat genotypes when most of the roots were grown without P and only 3 cm length of root was supplied with 0.3 mmol P L^–1. The relationship between the number and density of 2nd-order lateral roots and level of local P supply was quadratic. Maximum number and density of 2nd-order lateral roots were obtained with a localized P supply of 0.70 mmol L^–1.     

Changes in the motility patterns of spermatozoa from the rabbit epididymis as assessed by computer-aided sperm motion analysis

Sperm maturation in the epididymis includes changes in their potential for motility that enables spermatozoa to reach the egg and penetrate its investments. The motility characteristics of spermatozoa from the testis, the epididymis, and vas deferens of the rabbit were investigated by computer-assisted sperm analysis (CASA). Various forms of motility were displayed by sperm from different regions of the epididymis released into incubation medium Testicular sperm were motile, although nonprogressive. The maximum percentage motility was expressed by sperm in the proximal cauda epididymidis, and forward progression was developed by spermatozoa from the distal caput. Once forward progression was established, the curvilinear velocity was about the same for sperm from all regions of the tract, whereas straight-line velocity increased between the mid-corpus and cauda and paralleled the decline in lateral displacement of the head. The maintenance of motility in vitro was best maintained by sperm from the distal regions of the tract although sperm from the distal caput maintained motility better than sperm from the proximal and midcorpus regions. Analysis of the motile sperm cells revealed several types of trajectories (“irregular,” “small circular,” “large circular and arcs,” “jagged” and “straight-line”) that were analyzed by discriminant analysis using the variables generated by CASA. Accuracy of classification varied from 70% to 96%, depending on the type of track. The classification function was then applied to the changes that occurred during incubation and showed that irregular trajectories gave way to small and then large circular tracks and progressive forms as sperm matured. © 1996 Wiley-Liss, Inc.     

Growth,14CO2 fixation,activites of photosystems,ribulose 1,5-bisphosphate carboxylase and nitrate reductase in trees as affected by simulated acid rain

In seedlings of the tropical tree speciesErythrina variegata Lam. andHardwickia binata Roxb. exposed to different acidic mist (H₂SO₄, pH 5, 3 and 2) for 5 d significant reduction in seedling growth, biomass accumulation and¹⁴CO₂ fixation were determined. In isolated chloroplasts a decrease in the activities of photosystem 2 and whole electron transport chain was observed only at pH 3 and 2, but no significant change in photosystem 1 activity was observed. SDS-PAGE analysis of crude leaf extracts of ribulose 1,5-bisphosphate carboxylase (RuBPC) indicated a significant loss of 55 and 15 kDa polypeptides at pH 2 inErythrina. The reduction in the RuBPC activity in seedlings grown under acidic mists correlated well with CO₂ fixation.     

Lipid composition of pine needle chloroplasts and apple bark tissue as affected by growth temperature and daylength changes. 2. Glycolipids, neutral lipids and chlorophyll

Glycolipids, neutral lipids and chlorophyll of chloroplasts of pine needles ( Pinus sylvestris L.) and apple bark tissue ( Malus sylvestris Mill. cv Golden Delicious) were determined in a series of experiments in which growth temperature and daylength were changed. Trees were exposed to 0 and 20°C and to daylength conditions of 9 and 14 h. All 16 possible combinations were studied by transfer of the trees from the original condition to each of the other conditions. There was no direct relation between cold hardiness and glycolipid composition in apple bark and pine chloroplasts, when temperature and/or daylength were changed. Glycolipid and neutral lipid composition seemed to be strongly determined by the sequence of the imposed sets of daylength and temperature, and the effects of these factors on lipids strongly differed from that on cold hardiness. When the treatments were given in seasonal order, the corresponding changes in chloroplast glycolipids matched those reported in the literature for needles collected in the forest the year around. Glycolipid synthesis could well be under phytochrome control.     

The growth and some physiological responses of rice to Cd toxicity as affected by nitrogen form

A hydroponic experiment was conducted to examine the effect of Cd stress on anti-oxidative enzyme activities at heading stage, yield components, root exudation and Cd and N uptake of rice plants grew in different N source i.e. (NH₄)₂SO₄, NH₄NO₃ and Ca(NO₃)₂. The results show that the effect of Cd stress on all measured parameters were N source dependent. Cd stress (1 μM) caused a remarkable reduction in grain yield and shoot biomass, an increase in root exudation, glutathione content, Cd concentration and catalase (CAT) and peroxidase (POD) activities of rice plants. In the plants under the control (without Cd addition) N source had no distinctive effect on the above measured parameters, but the differences among the three N forms in these parameters became significant when plants were exposed to Cd stress. Cd stress significantly increased POD and CAT activities, and gultathione content, with Ca(NO₃)₂-fed plants having the greatest POD and CAT activities and lowest glutathione content, and (NH₄)₂SO₄-fed plants being just opposite. Moreover, organic acid exudation varied also with N form for the Cd-stressed plants. In comparison with other two N forms, (NH₄)₂SO₄,-treated plants had higher grain yield, N concentration and lower Cd concentration in plants. The current results indicated that (NH₄)₂SO₄ is a better fertilizer for use in Cd contaminated soil.     

The distribution of nitrate reductase in tomato (Lycopersicon esculentum) leaves as affected by age

The distribution of nitrate reductase (NR, EC 1.6.6.1.) in the leaves of single-stem tomato plants ( Lycopersicon esculentum Mill., cv. Vandenbergs Moneydor) was studied using an in vitro test. The activity decreased from young to old leaves. However, a low value (NR minimum) occurred in some leaves below the apex, usually in the almost completely expanded leaves, provided that the plants received sufficient nitrate to induce optimum NR activity in all the leaves. When insufficient nitrate was available there was NR in the young leaves only. The observed NR minimum coincided with a low value for soluble carbohydrates and amino acids. Since there was no extra export of labelled carbon from the leaves with the NR minimum, it is suggested that in the almost completely expanded leaves carbohydrates produced by photosynthesis are mainly used for the production of polysaccharides for new cell walls. Consequently, less are left for the production of keto acids, which can act as acceptors for reduced nitrogen. Therefore, less amino acids are produced, and this may result in a lowered protein synthesis, including a lowered synthesis of nitrate reductase.