侵染西番莲属(Passiflora)植物的五个黄瓜花叶病毒分离物的特性比较

从紫果西番莲（Ｐａｓｉｆｌｏｒａｅｄｕｌｉｓ）、杂交种西番莲（Ｐ．ｅｄｕｌｉｓＸＰ．ｅｄｕｌｉｓｖａｒ．ｆｌａｖｉｃａｒｐａ）、黄果西番莲（Ｐ．ｅｄｕｌｉｓｖａｒ．ｆｌａｖｉｃａｒｐａ）、转心莲（Ｐ．ｃａｅｒｕｌｅａ）及龙珠果（Ｐ．ｆｏｅｔｉｄａ）分离到的５个黄瓜花叶病毒（ＣＭＶ）分离物（ＰＥ、ＰＥ２、ＰＥｆ、ＰＣ、ＰＦ）所作的生物学性质、理化特性和血清学关系的比较研究结果表明,５个分离物在寄主反应及血清学性质上存在不同,而在病毒粒体形态、体外抗性、蚜虫传毒和病毒外壳蛋白分子量方面无明显差异。根据５个分离物的寄主反应和血清学关系,可将其区分为ＣＭＶ的两个亚组,其中ＰＥ、ＰＥ２、ＰＣ和ＰＦ属ＣＭＶ亚组Ｉ,ＰＥｆ属ＣＭＶ亚组Ｉ。     

深圳近海表层浮游细菌分布特征及其环境影响因素

于2015年3月、5月、8月和10月在深圳市近岸海域(珠江口、深圳湾和大亚湾)采集表层水样,利用流式细胞仪测定总浮游细菌、高DNA含量亚群细菌(HNA)、低DNA含量亚群细菌(LNA)的丰度,分析它们的时空分布特点,阐释环境因子对浮游细菌时空分布格局的影响。结果表明,珠江口、深圳湾和大亚湾海域表层浮游细菌的平均丰度依次降低,分别为3.82×10~6个/mL、7.67×10~6个/mL和3.38×10~6个/mL。珠江口海域浮游细菌丰度由远岸到近岸递增,深圳湾海域湾内各站位浮游细菌丰度差异较小,大亚湾海域浮游细菌丰度空间差异不显著(P0.05)。浮游细菌丰度时间差异主要受温度影响,空间差异主要受营养盐和叶绿素a影响。HNA亚群丰度时空差异性比LNA亚群的大,HNA亚群受温度影响显著(P0.01),而LNA亚群与温度相关性不显著(P0.05)。环境对HNA和LNA亚群丰度的影响有许多相似之处,但两者对某些环境因子有着不同的响应,说明它们在近海表层生态系统中可能扮演着部分重叠但略有不同的角色。     

中国白纹伊蚊亚组伊蚊的研究Ⅱ.幼虫

中国白纹伊蚊亚组（Ae.albopictus subgroup）包括的9种蚊虫及其成蚊的校订、检索和记述,已见前文（陆,1982）。本文系对本亚组种类的幼虫,作类似的报告。     

Two high-copy plasmids found in plants associated with strains of "Candidatus Phytoplasma asteris"

Complete sequences for two plasmids associated with two strains of “Candidatus Phytoplasma asteris” have been obtained. The plasmid named pPARG1 was found in Rehmannia glutinosa L. associated with phytoplasma classified in the 16Sr I-C subgroup. Plasmid pPABN1 was from phytoplasma associated with infected winter oilseed rape and classified in the 16Sr I-B subgroup. The plasmids pPARG1 (4371 nt) and pPABN1 (3529 nt) have high A + T content of about 75%, similar to that of phytoplasma genomes. Six and five open reading frames longer than 100 amino acids and organized on the same strand were recognized on pPARG1 and pPABN1, respectively. A segment about 1.6 kbp long sharing high sequence identity with the Onion yellows phytoplasma genome was found in pPABN1.     

果蝇Drosophila nasuta亚群系统发育问题的探讨

果蝇Ｄｒｏｓｏｐｈｉｌａｎａｓｕｔａ亚群由在１４个处于不同物种分化阶段的种,亚种和分类元组成,这个亚群的物种有许多进化上的独特之处,使得它在物种分化研究方面倍受关注,然而,在形态学,生殖隔离,染色体和同工酶多态,线粒体ＤＮＡＲＦＬＰ,求偶歌特征惟及线粒体和核基因序列分析等方面的研究都未能清楚地阐明这一亚群的系统进化关系,本文综合分析了关于这一亚群的进化遗传学的研究结果,并提出了有待进一步的一些问题     

Spider monkey sleeping sites: Use and availability

The behavior of spider monkeys (Ateles geoffroyi) at sleeping sites and the characteristics of these sites were studied in Santa Rosa National Park, Costa Rica. The spider monkeys tended to congregate just prior to dusk at a number of sleeping sites which were repeatedly used (81.6%), but occasionally they slept in trees which were only used once (18.4%). All of the regularly used sleeping trees were not used concurrently, but rather, there was a rotation between sites. In general, males were not encountered at regularly used sleeping sites as often as other age/sex classes, and when they were in all male subgroups, they did not sleep in repeatedly used sites. The trees used as regular sleeping sites tended to be large, but such trees were common in the group's home range. The size of the subgroups attending repeatedly used sleeping trees was large when food was abundant and small when food was scarce. It is suggested that this relationship reflects that the costs of travelling to the sleeping site would be more easily recovered when food was abundant than when food was scarce.     

Competition Between Cucumber Mosaic Virus Subgroup I and II Isolates in Tobacco

Historical reports indicate that Cucumber mosaic virus (CMV) strain subgroup I is more prevalent than subgroup II in most parts of the world, but recent reports suggest that subgroup II isolates may be far more abundant than previously found in China. In order to evaluate the dominance of CMV subgroup I and subgroup II strains in co-infected tobacco plants, four isolates, NX and YQ in subgroup I, and ZL and AG in subgroup II, were tested in competition experiments. In these comparisons, the frequency of infection was assessed, and ratios between singly and doubly infected plants were calculated based on ELISA tests of tobacco leaves. In contrast to previous reports suggesting that subgroup I strains are usually more competitive than subgroup II strains in the field, the results from the present study indicate that the subgroup II ZL isolate was more competitive than the subgroup I YQ isolate, even though the ZL isolate caused milder symptoms than YQ in singly infected tobacco. In contrast, the subgroup I strains NX and YQ were more competitive than subgroup II AG. This information provides evidence for variation in the competitive abilities of subgroup II strains in tests with subgroup I strains, and suggests that direct competition during mixed infections may account in part for the recent spread of some subgroup II strains in China and elsewhere.     

由高粱花叶病毒和甘蔗花叶病毒引发的浙江甘蔗花叶病害

从浙江省5个地区采集表现花叶症状的甘蔗病叶,用马铃薯Y病毒科简并引物做PCR扩增及测序鉴定.序列分析表明,5个甘蔗样品均含有高粱花叶病毒(SrMV),其中3个样品中还存在甘蔗花叶病毒(SCMV)的复合侵染.序列比较和系统进化树分析表明,浙江甘蔗样品中的SrMV序列彼此很相似,核苷酸同源性大于93%,与已报道的4个美国分离物在CP区域同源性很高,但是3′非编码区的同源性却仅为70%左右.SCMV欧洲和中国玉米分离物及美国、南非和澳大利亚甘蔗分离物分别形成两个远缘群体,浙江甘蔗分离物群体位于两者之间;群体间CP氨基酸序列同源性均大于80%.甘蔗和玉米上的SCMV差异明显,多为无义突变.     

黄瓜花叶病毒及抗病转基因烟草研究进展

黄瓜花叶病毒(Cucumber mosaic virus,CMV)是世界上分布最广的植物病毒之一,其株系繁多,给烟草生产造成很大的损失。近些年来,各国学者对CMV开展了大量研究。该文主要介绍了黄瓜花叶病毒的基因组结构、亚组以及抗CMV的烟草基因工程的研究进展。     

Genetic variation in the capsid region of human astrovirus serotype 4 isolated in Japan

The entire capsid regions of 12 serotype-4 astroviruses from Japan were sequenced and compared with those of other serotypes. Serotype-4 isolates were divided into two new subgroups. The intrasubgroup nucleic acid and deduced amino acid sequences were quite homologous (more than 93%), but slightly less so between subgroups (almost 85%). However, the serotype-4 sequences differed from those of serotypes 1, 2, 3, 5, 6, 7 and 8 (less than 50%). Determining whether these differences significantly alter the epidemiology and antigenicity will require further investigation.     

A multiple comparison procedure for dose-finding trials with subpopulations

Identifying subgroups of patients with an enhanced response to a new treatment has become an area of increased interest in the last few years. When there is knowledge about possible subpopulations with an enhanced treatment effect before the start of a trial it might be beneficial to set up a testing strategy, which tests for a significant treatment effect not only in the full population, but also in these prespecified subpopulations. In this paper, we present a parametric multiple testing approach for tests in multiple populations for dose-finding trials. Our approach is based on the MCP-Mod methodology, which uses multiple comparison procedures (MCPs) to test for a dose–response signal, while considering multiple possible candidate dose–response shapes. Our proposed methods allow for heteroscedastic error variances between populations and control the family-wise error rate over tests in multiple populations and for multiple candidate models. We show in simulations that the proposed multipopulation testing approaches can increase the power to detect a significant dose–response signal over the standard single-population MCP-Mod, when the specified subpopulation has an enhanced treatment effect.     

Comparative genomics and phylogenetic analysis of <Emphasis Type="Italic">S. dysenteriae</Emphasis> subgroup

Genomic compositions of representatives of thirteen S. dysenteriae serotypes were investigated by performing comparative genomic hybridization (CGH) with microarray containing the whole genomic ORFs (open reading frames, ORFs) of E. coli K12 strain MG1655 and specific ORFs of S. dysenteriae A1 strain Sd51197. The CGH results indicated the genomes of the serotypes contain 2654 conserved ORFs originating from E. coli. However, 219 intrinsic genes of E. coli including those prophage genes, molecular chaperones, synthesis of specific O antigen and so on were absent. Moreover, some specific genes such as type II secretion system associated components, iron transport related genes and some others as well were acquired through horizontal transfer. According to phylogenic trees based on genetic composition, it was demonstrated that A1, A2, A8, A10 were distinct from the other S. dysenteriae serotypes. Our results in this report may provide new insights into the physiological process, pathogenicity and evolution of S. dysenteriae.     

Influence of environmental conditions on the distribution of Central Asian green toads with three ploidy levels

We studied the distribution of Palearctic green toads (Bufo viridis subgroup), an anuran species group with three ploidy levels, inhabiting the Central Asian Amudarya River drainage. Various approaches (one‐way, multivariate, components variance analyses and maximum entropy modelling) were used to estimate the effect of altitude, precipitation, temperature and land vegetation covers on the distribution of toads. It is usually assumed that polyploid species occur in regions with harsher climatic conditions (higher latitudes, elevations, etc.), but for the green toads complex, we revealed a more intricate situation. The diploid species (Bufo shaartusiensis and Bufo turanensis) inhabit the arid lowlands (from 44 to 789 m a.s.l.), while tetraploid Bufo pewzowi were recorded in mountainous regions (340–3492 m a.s.l.) with usually lower temperatures and higher precipitation rates than in the region inhabited by diploid species. The triploid species Bufo baturae was found in the Pamirs (Tajikistan) at the highest altitudes (2503–3859 m a.s.l.) under the harshest climatic conditions.     

基于流式细胞术快速检测人鼻黏膜组织淋巴细胞亚群的实验研究

目的：基于流式细胞术检测正常人的鼻黏膜组织中的淋巴细胞亚群(CD3+T、CD4+T、CD8+T、NK、CD19+B)的比例,初步探讨 鼻局部黏膜免疫功能的意义,为鼻局部黏膜免疫性疾病的研究提供更多的参考。方法：用鼻黏膜刮匙获取21 例正常人的鼻黏膜 组织,并抽取其外周血2 mL。采用流式细胞术分别检测其鼻黏膜和外周血中的淋巴细胞亚群(包括CD3+T、CD4+T、CD8+T、NK、 CD19+B)分别所占的比例。结果：鼻黏膜和外周血的淋巴细胞亚群存在很大差异,与外周血相比,CD3+T 比例增加（t=15.34,P<0. 0001),CD4+T 比例降低(t=5.952,P<0.0001)、CD8+T 比例增加(t=12.44,P<0.0001)、NK 比例降低(t=4.865,P<0.0001)、CD19+B 比例降 低(t=15.56,P<0.0001),CD4+T/CD8+T 降低。结论：流式细胞术可以用来检测鼻黏膜的淋巴细胞亚群,鼻黏膜的淋巴细胞亚群和外 周血的淋巴细胞亚群存在很大差异,这种差异体现鼻黏膜组织独特的局部黏膜免疫功能,本方法为变应性鼻炎的研究提供了新 的研究途径。     

Development of a specific PCR assay for the detection of Rhizoctonia solani AG 1-IB using SCAR primers

AIMS: The aim of this study was to develop a specific and sensitive identification method for Rhizoctonia solani AG 1-IB isolates based on phylogenetic relationships of R. solani AG-1 subgroups using rDNA-internal transcribed spacer (rDNA-ITS) sequence analysis. METHODS AND RESULTS: A neighbour-joining tree analysis of 40 rDNA-ITS sequences demonstrated that R. solani AG-1 isolates cluster separately in six subgroups IA, IB, IC, ID, IE and IF. A molecular marker was generated from a random amplified polymorphic DNA fragment (RAPD). After conversion into a sequence-characterized amplified region (SCAR), a specific primer set for identification of subgroup AG 1-IB was designed for use in a polymerase chain reaction (PCR). The primer pair amplified a single DNA product of 324 bp. CONCLUSIONS: R. solani AG-1 subgroups were discriminated by sequence analysis of the ITS region. The designed SCAR primer pair allowed an unequivocal and rapid detection of R. solani AG 1-IB in plant and soil samples. SIGNIFICANCE AND IMPACT OF THE STUDY: Sequence analysis of the rDNA-ITS region can be used for differentiation of subgroups within AG-1. The use of the developed SCAR primer set allowed a reliable and fast identification of R. solani AG 1-IB and provides a powerful tool for disease diagnosis.     

Characterisation of Saccharomyces cerevisiae ARO8 and ARO9 genes encoding aromatic aminotransferases I and II reveals a new aminotransferase subfamily

The ARO8 and ARO9 genes of Saccharomyces cerevisiae were isolated by complementation of the phenylalanine/tyrosine auxotrophy of an aro8 aro9 double-mutant strain that is defective in aromatic aminotransferases I (aro8) and II (aro9). The genes were sequenced, and deletion mutants were constructed and analysed. The expression of ARO8 and ARO9 was studied. The deduced amino acid sequences of Aro8p and Aro9p suggest that the former is a 500-residue, 56168-Da polypeptide and the latter a 513-residue, 58516-Da polypeptide. They correspond, respectively, to Ygl202p and Yhr137p, two putative proteins of unknown function revealed by systematic sequencing of the yeast genome. We show that aromatic aminotransferases I and II are homologous proteins, members of aminotransferase subgroup I, and, together with three other proteins, they constitute within the subgroup a new subfamily of enzymes specialised for aromatic amino acid and α-aminoadipate transamination. ARO8 expression is subject to the general control of amino acid biosynthesis. ARO9 expression is induced when aromatic amino acids are present in the growth medium and also in aro8 mutants grown on minimal ammonia medium. An autonomously replicating sequence (ARS) element is located between the ARO8 gene and YGL201c which encodes a protein of the minichromosome maintenance family. Received: 18 June 1997 / Accepted: 23 September 1997     

禽白血病病毒J亚群内蒙株的分离与鉴定

本研究从曾见典型禽骨髓性白血病(Myeloid Leukosis,ML)病例的内蒙古某肉种鸡场随机选取的淘汰肉种鸡中,分离出一株J亚群禽白血病病毒(Avian leukosis virus Subgroup J.ALV-J)。利用PCR和间接免疫荧光反应进行鉴定,J亚群禽白血病病毒内蒙株可以被两对ALV—J特异性引物扩增(特异条带约2．2kb和545bp);且在特异性单抗的间接免疫荧光检测中呈现强阳性荧光反应。此外,对山东一例肉种鸡骨髓性白血病病例亦进行了J亚群禽白血病病毒的分离与鉴定。2．2kb PCR扩增物的测序结果表明,两株分离病毒的同源性为96．9％,与已分离的SD9901和YZ9901株ALV-J同源性达94．2％～95.4％。