Inhibitors of Glutathione Reductase as Potential Antimalarial Drugs Kinetic Cooperativity and Effect of Dimethyl Sulphoxide on Inhibition Kinetics

Abstract

We have developed inhibitors of glutathione reductase that improve on the inhibition of literature lead compounds by up to three orders of magnitude. Thus, analogues of Safranine O and menadione were found to be strong, reversible inhibitors of yeast glutathione reductase. Safranine O exhibited partial, uncompetitive inhibition with K_i and α values of 0.5 mM and 0.15, respectively. Thionine O was a partial (hyperbolic) uncompetitive inhibitor with K_i and α values of 0.4μM and 0.15, respectively. LY83583 and 2-anilino-l,4-naphthoquinone also showed (hyperbolic) partial, uncompetitive inhibition with micromolar K_i values. For Nile Blue A a model for two-site binding with (parabolic) uncompetitive inhibition fitted the data with a K_i value of 11 μM and a kinetic cooperativity between the sites of 0.12, increased to 0.46 by pre-incubation of the enzyme and Nile Blue A in the presence of glutathione disulphide. Analysis of the effects of preincubation on the kinetics and cooperativity indicated the possibility of a slow conformational change in the homodimeric enzyme, the first such indication of kinetic cooperativity in the native enzyme to our knowledge. Further evidence of conformational changes for this enzyme came from studies of the effects of dimethyl sulphoxide which indicated that this co-solvent, which at low concentrations has no apparent effect on initial velocities under normal assay conditions, induced a slow conformational change in the enzyme. Thionine O, Nile Blue A and LY83583 were redox-cycling substrates producing superoxide ion, detectable by means of cytochrome c reduction, but leading to no loss of glutathione reductase activity, under aerobic or anaerobic conditions. The water-soluble Safranine analogues Methylene Blue, Methylene Green, Nile Blue A and Thionine O (5 mg/kg i.p. x 5) were effective antimalarial agents in vivo against P. berghei, but their effect was small and a higher dose (50mg/kg i.p. x 1) was toxic in mice. Comparison was made with human glutathione reductase and its literature-reported interactions with several tricyclic inhibitors as studied by X-ray diffraction. It is possible that the conformational changes detected in the present study from alterations in detailed kinetic inhibition mechanisms may shed light on information transfer through the glutathione reductase molecule from the dimer interface ligand pocket to the active-site.     

磷脂对琥珀酸-细胞色素c还原酶的作用

琥珀酸细胞色素c还原酶除去90％以上的磷脂后活力丧失约95％。将去脂琥珀酸细胞色素c还原酶与磷脂和辅酶Q_2保温,可恢复其活性。活力恢复程度依赖于磷脂的组成。当磷脂酰胆碱(PC):心磷脂(CL):磷脂酰乙醇胺(PE)=2:2:1时活力恢复最高,比大豆磷脂的效果更为明显,单组分PC,PE或CL恢复活力较差。与酶蛋白紧密结合的CL和PC在活力可逆恢复中有重要作用。     

脂对泛醌细胞色素c还原酶的影响

用羟基磷灰石柱亲和层析法制备了高纯度的缺脂泛醌细胞色素c还原酶．脂的缺失使该酶活力丢失,部分细胞色素（约52.8％细胞色素b和82.5％细胞色素c₁）呈现还原状态．将缺脂泛醌细胞色素。还原酶与磷脂重组,可恢复其活性,同时那些呈还原状态的细胞色素也恢复到氧化态.此结果表明如此制备的缺脂泛醌细胞色素c还原酶仍保持着活力所必需的构象状态,细胞色素氧化还原状态随脂缺失的变化反映了脂与蛋白的相互作用.     

硝基水杨酰胺抑制泛醌-细胞色素c还原酶的作用对氢醌的敏感性

泛醌－细胞色素ｃ还原酶（ＱＣＲ）是线粒体呼吸链的三个能量偶联部位之一,它起着将电子从还原型泛醌传递给细胞色素ｃ（Ｃｙｔ．ｃ）的作用,根据Ｋｉｎｇ和Ｙｕ提出的泛醌结合蛋白理论［１］,泛醌－细胞色素ｃ还原酶中含有泛醌结合蛋白ＱＰｃ．研究表明,泛醌－细胞色...     

猪肝微粒体NADH－细胞色素b_5还原酶的纯化及特性分析

采用硫酸铵分级分离,ＳｅｐｈａｄｅｘＧ－１００凝胶过滤,ＤＥＡＥ－纤维素离子交换层析以及５＇－ＡＭＰ～Ｓｅｐｈａｒｏｓｅ４Ｂ亲和层析,从猪肝微粒体中纯化得到可溶性的ＮＡＤＨ－细胞色素ｂ５还原酶,提纯倍数为７５０～８００。总回收率为４０％左右。纯化的酶是典型的黄素蛋白吸收光谱,Ａ２７３／Ａ４６０比值为５．８。在ＳＤＳ－聚丙烯酸胺凝胶电泳板上呈单一的蛋白质区带,分子量为３２ｋｄ。ＮＡＤＨ和２,６－二氯酚靛酚的Ｋｍ值分别为２４和４５μｍｏｌ／Ｌ,以２,６－二氯酚靛酚为底物时,该还原酶的催化作用可能为乒乓机制。该酶的纯化为分子水平研究其反应机制及制备相应的抗体以建立免疫学检测方法创造了条件。     

多巴胺类似物抑制二氢蝶啶还原酶的研究

多巴胺类似物对二氢蝶啶还原酶有明显的非竞争性抑制作用(Ki或I_(50)值为10~(-5)—10~(-6)mol/L)。其中阿朴吗啡是最强的抑制剂之一(Ki或I~(50)=1-2×10~(-6)mol/L)。由于酪氨酸羟化酶和二氢蝶啶还原酶包含于同一酶促反应过程中,且限制了多巴胺合成的决定速度的那一步。这些结果可能提示出被多巴胺抑制的酪氨酸羟化作用包含着对这二种酶的抑制作用。     

Effect of some metals and related metal-orgaic compounds on ALA-dehydratase activity of corn

Summary The activity of ALA-dehydratase from corn seedlings is affected by Mn⁺⁺, Fe⁺⁺, Pb⁺⁺, Cu⁺⁺, Zn⁺⁺ and Sn⁺⁴ ions, in vivo Mn⁺⁺ and Fe⁺⁺ are ativators while Pb⁺⁺ and Sn⁺⁴ are inhibitors; in vitro Cu⁺⁺ and Zn⁺⁺ are inhibitors. The kinetic parameters (V_max and K_M) support the hypothesis that Mn, Fe, Sn and Pb ions act on the biosynthesis of the enzyme and Zn and Cu ions on the enzyme-substrate affinity. Some related metal-organic compounds interrere in vivo on the ALA-dehydratase activity modifying the kinetic parameters, therefore the enzyme biogenesis and/or enzyme-sustrat affinity are affected.     

Kinetic and Structural Characterization of the Interaction between the FMN Binding Domain of Cytochrome P450 Reductase and Cytochrome c

Cytochrome P450 reductase (CPR) is a diflavin enzyme that transfers electrons to many protein partners. Electron transfer from CPR to cyt c has been extensively used as a model reaction to assess the redox activity of CPR. CPR is composed of multiple domains, among which the FMN binding domain (FBD) is the direct electron donor to cyt c. Here, electron transfer and complex formation between FBD and cyt c are investigated. Electron transfer from FBD to cyt c occurs at distinct rates that are dependent on the redox states of FBD. When compared with full-length CPR, FBD reduces cyt c at a higher rate in both the semiquinone and hydroquinone states. The NMR titration experiments reveal the formation of dynamic complexes between FBD and cyt c on a fast exchange time scale. Chemical shift mapping identified residues of FBD involved in the binding interface with cyt c, most of which are located in proximity to the solvent-exposed edge of the FMN cofactor along with other residues distributed around the surface of FBD. The structural model of the FBD-cyt c complex indicates two possible orientations of complex formation. The major complex structure shows a salt bridge formation between Glu-213/Glu-214 of FBD and Lys-87 of cyt c, which may be essential for the formation of the complex, and a predicted electron transfer pathway mediated by Lys-13 of cyt c. The findings provide insights into the function of CPR and CPR-cyt c interaction on a structural basis.     

Regulation of Nitrate Reductase Activity in Leaves of Soybean Bragg and Its Nodulated Mutants

The extracts from leaves of nodulated soybean (Glycine max (L.) Merr. ) cv. Bragg and its nodulated mutants i. e. non-nodulated Nod 49, supernodulated nts 382 and nts 246 contained inhibitors of activities iNR, c1NR and c2NR in vitro. Both white light illumination of 300 μE · m-2 · s-1 and inoculation with strain USDAll0 were essential conditions for ac- cumulating these inhibitors in leaves. Comparing inhibiting activities of the extracts from different varieties indicated that Nod 49 extract showed stronger inhibition than Bragg extract did, but nts 382 extract had only weakest inhibitory effect. The inoculated Bragg root extract possessed the same inhibitory activity as its leaf extract. The inoculated nts 382 root extract, like its leaf extract, showed only a little inhibitory activity. However inoculated Nod 49 root extract lead to an inhibition of leaf c2NR activity, which was different from its leaf extract that inhibited three kinds of NR activities. The above results suggested that both leaf and root extracts contained common inhibitory factor which was accumulated after inoculation.     

Amino acid sequence of cytochrome c fromAspergillus niger

Cytochrome c fromAspergillus niger consists of two forms, a major one (80%) with 111 amino acid residues and a minor one (20%) with 108 residues, missing the three N-terminal residues of the major one. The primary sequence ofA. niger cytochrome c was determined by standard spinning-cup Edman degradation of purified peptides and of pairs of peptides, from which the desired sequence was readily deduced by subtraction of common sequencies. Except for the extension and some variability at the N-terminal sequence, theA. niger protein conforms well with other cytochrome c structures.     

去血红素细胞色素c的制备及其结构研究

在酸性条件下用硫酸银断裂马心细胞色素ｃ（以下简称ｃｙｔ．ｃ）的肽链与血红素相连的硫醚键,通过酸性丙酮抽提,硫基乙醇处理及超速离心等步骤纯化得去血红素的ｃｙｔ．ｃ（以下简称Ａｐｏ－ｃｙｔ．ｃ）。Ａｐｏ－ｃｙｔ．ｃ与天然ｃｙｔ．ｃ相比,其酸性电泳迁移率明显降低,紫外－可见光谱在１９０～２２０ｎｍ处吸收上升,荧光光谱的最大发射峰波长产生红移,同时ＣＤ谱中α螺旋的特征峰完全消失,这说明在ｃｙｔ．ｃ去血红素的过程中,蛋白质已由原来的紧密球状结构变成了较为松散、伸展的无规卷曲构象。因此,血红素对ｃｙｔ．ｃ天然构象的维持有着重要作用。     

Investigation of the Effects of Some Drugs and Phenolic Compounds on Human Dihydrofolate Reductase Activity

Dihydrofolate reductase (DHFR) plays a fundamental role in cellular metabolism and cell growth. Inhibition of this enzyme will cause a decrease in the amount of folate that occurs in many metabolic processes, and the deficiency of which may cause various diseases. This study investigated the effects of some drugs and phenolic compounds on DHFR activity in vitro. To determine the inhibitory effect of compounds, enzyme activity was measured with a final concentration of an inhibitor ranging from 10 μM to 51 mM. DHFR was inhibited effectively by naringin, ferulic acid, and levofloxacin with IC₅₀ values under 660 μM. Syringic acid, cefepime, ceftizoxime, cefazolin, ceftriaxone, and ceftazidime exhibited inhibitory effects on the enzyme activity with IC₅₀ values in the range of 3.840–30.224 mM. K_i constants were calculated using the Cheng–Prusoff equation. K_i constants calculated in the range of 0.009–2.024 mM with respect to nicotinamide adenine dinucleotide phosphate oxidase (NADPH) and in the range of 0.060–5.830 mM about FH₂.     

Ascorbate peroxidase activity of cytochrome c

Abstract

The peroxidase-type reactivity of cytochrome c is proposed to play a role in free radical production and/or apoptosis. This study describes cytochrome c catalysis of peroxide consumption by ascorbate. Under conditions where the sixth coordination position at the cytochrome c heme iron becomes more accessible for exogenous ligands (by carboxymethylation, cardiolipin addition or by partial denaturation with guanidinium hydrochloride) this peroxidase activity is enhanced. A reaction intermediate is detected by stopped-flow UV-vis spectroscopy upon reaction of guanidine-treated cytochrome c with peroxide, which resembles the spectrum of globin Compound II species and is thus proposed to be a ferryl species. The ability of physiological levels of ascorbate (10–60 µM) to interact with this species may have implications for mechanisms of cell signalling or damage that are based on cytochrome c/peroxide interactions.     

Effect of Electroconvulsive Shock on Mitochondrial Respiratory Chain in Rat Brain

It is well described that impairment of energy production has been implicated in the pathogenesis of a number of diseases. Although several advances have occurred over the past 20 years concerning the use and administration of electroconvulsive therapy (ECT) to minimize its side effects, little progress has been made in understanding its mechanism of action. In this work, our aim was to measure the activities of mitochondrial respiratory chain complexes II and IV and succinate dehydrogenase from rat brain after acute and chronic electroconvulsive shock (ECS). Our results showed that mitochondrial respiratory chain enzymes activities were increased after acute ECS in hippocampus, striatum and cortex of rats. Besides, we also demonstrated that complex II activity was increased after chronic ECS in cortex, while hippocampus and striatum were not affected. Succinate dehydrogenase, however, was inhibited after chronic ECS in striatum, activated in cortex and not affected in hippocampus. Finally, complex IV was not affected by chronic ECS in hippocampus, striatum and cortex. Our findings demonstrated that brain metabolism is altered by ECS.     

Membrane-bound Bacillus cytochromes c and their phylogenetic position among bacterial class I cytochromes c

Abstract Gram-positive bacteria lack a periplasmic compartment and contain only membrane-bound cytochromes c . There are at least two types. One is found in subunit II of cytochrome oxidase, and the other is small cytochrome c which is also membrane-bound because of an unprocessed signal sequence or post-translational acylation at the N-terminal end of the protein. These Bacillus cytochromes c are compared with known class I cytochromes c , and a phylogenetic tree has been constructed by the neighbour-joining method.     

Characterisation of ionisations that influence the redox potential of mitochondrial cytochrome c and photosynthetic bacterial cytochromes c2

Several cytochromes c₂ from the Rhodospirillaceae show a pH dependence of redox potential in the physiological pH range which can be described by equations involving an ionisation in the oxidised form (pK_o) and one in the reduced form (pK_r). These cytochromes fall into one of two groups according to the degree of separation of pK_o and pK_r. In group A, represented here by the Rhodomicrobium vannielii cytochrome c₂, the separation is approx. one pH unit and the ionisation is that of a haem propionic acid. Members of this group are unique among both cytochromes c₂ and mitochondrial cytochromes c in lacking the conserved residue Arg-38. We propose that the role of Arg-38 is to lower the pK of the nearby propionic acid, so that it lies out of the physiological pH range. Substitution of this residue by an uncharged amino acid leads to a raised pK for the propionic acid. In group B, represented here by Rhodopseudomonas viridis cytochrome c₂, the separation between pK_o and pK_r is approx. 0.4 pH unit and the ionisable group is a histidine at position 39. This was established by NMR spectroscopy and confirmed by chemical modification. Only a few other members of the cytochrome c₂/mitochondrial cytochrome c family have a histidine at this position and of these, both Crithidia cytochrome c-557 and yeast cytochrome c were found to have a pH-dependent redox potential similar to that of Rps. viridis cytochrome c₂. Using Coulomb's law, it was found that the energy required to separate pK_o and pK_r could be accounted for by simple electrostatic interactions between the haem iron and the ionisable group.     

Kinetic Studies on the Interaction of Ferricytochrome c with Anionic Surfactants

The kinetics of absorbance and fluorescence changes of cytochrome c as induced by an aqueous solution of the anionic surfactant sodium dodecyl sulfate (SDS) or sodium bis(2-ethylhexyl)sulfosuccinate (AOT) are studied. The results are compared with far-UV circular dichroism (CD) spectra. Both surfactants cause similar alterations in the secondary structure of cytochrome c, while their influence on the heme environment of cytochrome c is different. In the presence of AOT below and above critical micellar concentration a conversion of the low-spin native cytochrome c to a denatured low-spin protein not having methionine ligand takes place. In the presence of SDS micelles conversion of the native protein to a denatured mixed-spin form occurs. The changes in the heme group induced by both surfactants occur independently of the alterations in tertiary structure.     

Electrochemical reactions of horse heart cytochrome c at graphite electrodes

The interaction of cytochrome c with a paraffin-wax-impregnated spectroscopic graphite electrode (WISGE) was studied in a medium consisting of 0.1 M potassium phosphate, pH 7.0, by means of differential pulse and cyclic voltammetry. Ferricytochrome c yields on voltammograms a single cathodic peak C around a potential of -0.3 V (vs. Ag/AgCl) and two anodic peaks AI and AII around the potentials of 0.66 and 0.89 V, respectively. Cathodic peak C corresponds to a catalytic reaction during which ferricytochrome c is reduced to ferrocytochrome c: ferricytochrome c is then regenerated by chemical oxidation of ferrocytochrome c by oxygen adsorbed at the WISGE surface. The first, more negative anodic peak AI corresponds to anodic electrochemical oxidation of tyrosine residues, whereas the second, more positive anodic peak (peak AII) corresponds to an anodic reaction of haemin. Voltammetry at a WISGE may provide a valuable technique for obtaining data about cytochrome c properties on electrically charged surface.     

Biochemical properties of cytochrome c nitrated by peroxynitrite

Nitration of tyrosine residues is taken as evidence for intracellular formation of peroxynitrite. Cytochrome c (cyt c) can be nitrated by peroxynitrite and nitrated cyt c has been observed in cells and tissues under stress conditions. Here we studied the biochemical properties of nitrated cyt c in order to understand its potential roles in nitrative stress. Nitration of cyt c resulted in disruption of the heme-methionine bond and rapid binding to cyanide. Equilibrium unfolding by guanidine hydrochloride showed that cyt c was slightly destabilized upon nitration but the unfolding transition of nitrated cyt c was highly cooperative indicating that the overall folding was largely preserved. Nitrated cyt c could not be reduced by superoxide and did not support electron transfer between ascorbate and cyt c oxidase. Nitration of cyt c resulted in a tremendous increase in peroxidase activity so that nitrated cyt c rapidly oxidized dihydrodichlorofluorescein even in the presence of a high concentration of glutathione. Enhanced peroxidase activity of nitrated cyt c was responsible for H2O2-induced oxidation of phospholipid membranes and H2O2/NO2--mediated nitration of other proteins. These results suggest that nitration of cyt c by peroxynitrite may exacerbate oxidative damage to mitochondrial proteins and membranes.     

铝对玉米生长和硝酸还原酶活性的影响

测定了生长在Al2（SO4）100μmol／L氮素营养液中的两个玉米品种（SC704和VA35的根系和叶片）的NADH-硝酸还原酶（EC1．6．6．）和NAD（P）H-硝酸还原酶（EC1．6．6．2）活性。结果表明铝的存在阻碍了玉米根系和叶片的生长、降低了营养液的pH值,降低了叶片的NADH-及NAD（P）H-硝酸还原酶活性（酶活性降低的程度SC704低于VA35）,增加了根系的NADH-和NAD（P）H-硝酸还原酶活性（VA35根系的比活性除外）。铝胁迫下根系的NADH-和NAD（P）H-硝酸还原酶活性的增加SC704大于VA35。耐铝品种SC704的高NR活性以及在铝胁迫下能维持更高的NR活性的特点说明硝酸还原酶与植物组织的Al解毒机制有关。同时,在铝胁迫下的硝酸盐代谢中NAD（P）H-硝酸还原酶具有更重要的作用。