The Effect of Major Nutrient Elements on the Growth and Population Homogeneity of the R,S, and M Dissociants of Pseudomonas aeruginosa and the Glucose Oxidation and Fermentation Pathways

The population homogeneity of the stationary-phase monocultures of Pseudomonas aeruginosa dissociants was studied as a function of the initial content of major nutrient elements (C, N, and P) in the cultivation medium. The monocultures of the dissociants remained homogeneous during cultivation if the initial concentrations of the major nutrient elements were either sufficiently high or, conversely, very low, but became heterogeneous during cultivation in unbalanced (with respect to the major nutrient elements) media. At an initial concentration of nitrate in the medium equal to 0.07% or phosphate equal to 0.004–0.014%, the initially homogeneous population of R dissociant cultivated to the stationary growth phase turned out to contain 30–40% of S-type cells, whereas the initially homogeneous population of S dissociant was found to contain 50–80% of M-type cells. The population of M dissociant remained homogeneous throughout the cultivation period. R dissociant grew better at sufficiently high concentrations of glucose, nitrate, and phosphate in the medium, whereas M dissociant grew better when the initial concentrations of these nutrients were low. During the cultivation of R dissociant, the pH of the medium changed insignificantly, and the C/P ratio (the ratio of the carbon and phosphorus consumed during growth) was minimal (among the three dissociants), indicating that the R dissociant accomplishes the oxidative pathway of glucose metabolism. During the cultivation of the M dissociant, the pH of the medium dropped to 3.4–3.9, and the C/P ratio was maximal, indicating that this dissociant accomplishes the fermentative pathway of glucose metabolism. During the cultivation of the S dissociant, the pH of the medium and the C/P ratio exhibited variations, indicating that this dissociant triggers its pathways of glucose metabolism.     

Effect of major nutrient elements on the growth and population homogeneity of the R, S and M dissociants of Pseudomonas aeruginosa and the glucose oxidation and fermentation pathways

The population homogeneity of the stationary-phase monocultures of Pseudomonas aeruginosa dissociants was studied as a function of the initial content of major nutrient elements (C, N, and P) in the cultivation medium. The monocultures of the dissociants remained homogeneous during cultivation if the initial concentrations of the major nutrient elements were either sufficiently high or, conversely, very low, but became heterogeneous during cultivation in unbalanced (with respect to the major nutrient elements) media. At the initial concentration of nitrate in the medium equal to 0.07% or phosphate equal to 0.004-0.014%, the initially homogeneous population of R dissociant cultivated to the stationary growth phase turned out to contain 30-40% of S-type cells, whereas the initially homogeneous population of S dissociant was found to contain 50-80% of M-type cells. The population of M dissociant remained homogeneous throughout the cultivation period. R dissociant grew better at sufficiently high concentrations of glucose, nitrate, and phosphate in the medium, whereas M dissociant grew better when the initial concentrations of these nutrients were low. During the cultivation of R dissociant, the pH of the medium changed insignificantly, and the C/P ratio (the ratio of the carbon and phosphorus consumed during growth) was minimal (among the three dissociants), indicating that the R dissociant accomplishes the oxidative pathway of glucose metabolism. During the cultivation of the M dissociant, the pH of the medium dropped to 3.4-3.9, and the C/P ratio was maximal, indicating that this dissociant accomplishes the fermentative pathway of glucose metabolism. During the cultivation of the S dissociant, the pH of the medium and the C/P ratio exhibited variations, indicating that this dissociant triggers its pathways of glucose metabolism.     

The process of bacterial population splitting into dissociants and long-term batch cultivation of bacteria

The growth and composition of a population were studied during long-term (up to 50 days) batch cultivation of mono and mixed cultures of Pseudomonas aeruginosa S- and M-dissociants and Rhodobacter sphaeroides R- and M-dissociants without the addition of nutrients. During the cultivation of P. aeruginosa on a glucose-containing mineral medium, periodic lysis followed by polyculture growth resumption in the late stationary phase occurred on account of the M-dissociant: the change in its cell number corresponded to the change in the total cell number of the association. It was shown that the periodic occurrence of reducing sugars in the medium preceded the resumption of polyculture growth. Periodic secondary growth of the mixed culture of R. sphaeroides photosynthesizing bacteria occurred because of fast growing R-cells after the lysis of some part of the R-dissociant population. In the monoculture of the R. sphaeroides M-dissociant, R-cells were found during the whole period of cultivation, making up to 1–10% of the population irrespective of its size, which probably corresponded to the frequency of occurrence of this dissociant. In the R-dissociant monoculture, M-cells were found only after 26 days, and their number gradually decreased to half of population by the end of cultivation period. The joint growth of dissociants was characterized by the biomass increment and bacterial growth acceleration compared to monocultures, which is important for the fast development of new habitats under natural conditions. The cells of both bacterial species were lysed during long-term cultivation by exoproteinases secreted by the thin-wall cells of M-dissociants.     

药用蕈菌紫芝液体培养的生长特征分析

使用专门设计的ALR ff蕈菌液体培养反应器 ,研究了有关紫芝液体培养过程中菌丝生长的特征。结果表明 ,液体培养时紫芝菌丝生长对温度有较宽的适应范围 2 5℃～ 3 5℃ ,但生长比速率相差很大。通气量由 0 93vvm提高到 1 6 4vvm时 ,菌丝生长比速率明显地增加 ,最大值为 0 0 4 4 4 (h- 1) ;当通气量进一步提高到 2 5 0vvm时 ,生长比速率反而下降。与低糖浓度比较 ,较高糖浓度 (2 80g 1 0 0mL)可以使生长迟滞期缩短 ;培养后期菌丝缠绕成浓密颗粒 ,较高糖浓度可以促进生长。在整个培养过程中 ,糖浓度较低时葡萄糖转化成菌体的生长效率明显高于较高葡萄糖浓度的效率。碳源限制生长的连续培养研究结果 ,进一步反映了菌丝不同生长活性使菌丝物具有不同形态结构。菌体量、限制生长底物、菌体生成率的三者关系与细菌有明显的差异。并且 ,在 0 0 1 0～ 0 2 2 0 (h- 1)稀释率范围内菌丝生长符合Contois方程     

Determination of the Ks values during the growth of Alcaligenes eutrophus on phenol, 2,4-dichlorophenoxyacetic acid and fructose

The determination of the K_S values presented here is based on the estimation of the stationary substrate concentrations in continuous cultivation experiments. The separation of biomass from the suspension was performed by an ultrafiltration step which succeeded within one second. The decay of substrate concentration during sampling was calculated to amount to less than 6% of the stationary substrate concentration at relevant growth rates. The K_S values derived from these reduced substrate concentrations deviated by only 10% from the theoretical values at a biomass concentration of about 1 g/1. Thus relevant kinetic parameters can be calculated from the data obtained by this procedure. Values of 11, 59 and 14 μM were obtained with 2,4-dichlorophenoxyacetic acid (2,4-D), phenol and fructose, respectively. Similar K_S values were derived with 2,4-D and fructose by using a respirationbased determination for reasons of comparison. With phenol this value was only 7 μM which is as cribed to a physiological background.     

Mathematical modelling and process optimization of a continuous 5-stage bioreactor cascade for production of poly[-(R)-3-hydroxybutyrate] by Cupriavidus necator

A multistage system for poly(hydroxyalkanoate) (PHA) production consisting of five continuous stirred tank reactors in series (5-CSTR) with Cupriavidus necator DSM 545 as production strain was modelled using formal kinetic relations. Partially growth-associated production of PHA under nitrogen limited growth was chosen as modelling strategy, thus the Luedeking-Piret’s model of partial growth-associated product synthesis was applied as working hypothesis. Specific growth rate relations adjusted for double substrate (C and N source) limited growth according to Megee et al. and Mankad-Bungay relation were tested. The first stage of the reactor cascade was modelled according to the principle of nutrient balanced continuous biomass production system, the second one as two substrate controlled process, while the three subsequent reactors were adjusted to produce PHB under continuous C source fed and nitrogen deficiency. Simulated results of production obtained by the applied mathematical models and computational optimization indicate that PHB productivity of the whole system could be significantly increased (from experimentally achieved 2.14 g L^?1 h^?1 to simulated 9.95 g L^?1 h^?1) if certain experimental conditions would have been applied (overall dilution rate, C and N source feed concentration). Additionally, supplemental feeding strategy for switching from batch to continuous mode of cultivation was proposed to avoid substrate inhibition.     

Size distribution,growth and production of Sargassum thunbergii in an intertidal zone of Padori,west coast of Korea

This paper considers an estimation of population parameters by mathematical equations on the basis of size distribution and biomass obtained from a field survey. Sargassum thunbergii, a dominant alga in t he surf zone of Korean coast, was investigated from June 1990 to August 1991. We divided the population into interval groups according to the time of recruitment. A separation of the population by age or size was impossible because of difficulties arising from continuous recruitment over the growing season. The basic idea for the solution is based on the assumption that the estimated values of the growth rate, number of births and deaths reflect real values, if the biomass and coefficient of variation obtained from the field investigation are coincident with those calculated by equations. The predicted behavior of the population is as follows: the proportion of numbers of recruits is large, but the contribution of recruits to biomass and production is insignificant, and the growth curve shows a sigmoid pattern.     

Development and population structure of mixed (S + M) <Emphasis Type="Italic">Pseudomonas aeruginosa</Emphasis> cultures in the late stationary growth phase

Population growth, the ratio between dissociants, pH, and levels of reducing sugars in the medium were monitored during prolonged (375 h) batch cultivation of Pseudomonas aeruginosa S and M dissociants on mineral medium with glucose. During the stationary growth phase (100–375 h), two scenarios were possible. The first one included extensive cell autolysis coupled to alkalinization of the medium and an increased ratio of the M dissociant. In the second case, acidification of the medium was coupled to the oscillating secondary growth, mostly of the M dissociant; the dynamics of cell numbers of this dissociant correlated with the dynamics of the culture optical density. In this scenario, periodical appearance of reducing sugars in the medium was detected; it was in the opposite phase with the changes of the M dissociant cell numbers. The differences between scenarios of P. aeruginosa growth in the late stationary phase were probably due to the physiological and biochemical characteristics of the S and M dissociants, including different pathways of glucose utilization (respiration or fermentation), resistance to acidification, as well as synthetic (proteolytic) activity and productivity of autoinducers.     

Growth behavior and protease production by an icelandicthermus sp. isolate in batch and continuous culture

AThermus strain, producing an extracellular protease, was isolated in a hot spring in Iceland. The main growth characteristics of this isolate were studied with different cultivation vessels and different cultivation techniques. A clear and striking dependence of the growth behavior on the cultivation technique was apparent. Higher maximum yield of biomass, higher productivity of biomass, and higher maximum growth rate were found in continuous cultivations compared with batch cultivations. The substrate utilization and the yield of biomass of this strain were much higher than reported for several otherThermus strains. Reproducibility of kinetic data seemed not to depend on the type of cultivation vessel, on the basis of the types of vessels tested, and instability of the population was not observed during cultivations. Production of extracellular protease in our cultivations was apparently growth associated in batch culture, and the specific rate of production in continuous culture was dependent of the dilution rate, implying that certain kinds of regulatory mechanism(s) might be involved.     

不同高程短尖苔草对水位变化的生长及繁殖响应

在淡水湿地生态系统中,水位通常是制约植被生长和繁殖动态的关键因素,进而对物种组成、群落演替和植被分布格局产生决定性影响。无性繁殖是洞庭湖湿地克隆植物适应环境胁迫的重要策略之一,以洞庭湖湿地典型克隆植物-短尖苔草(Carex brevicuspis C.B.Clarke)为对象,研究了不同分布高程(23.7 m和25.8 m)的植物对水位变化(0 cm,-15 cm,-30 cm)的生长和繁殖特征响应。结果表明:水位变化对不同分布高程分布短尖苔草的生长和克隆繁殖特征均产生显著影响(P0.05)。对高程区的短尖苔草而言,克隆繁殖特征如分株数、分株总生物量、芽数和芽生物量随水位的降低而增加,而对生长特征(株高及总生物量)无显著影响(P0.05),表明适当干旱有利于高程区苔草的克隆繁殖。对于低程区分布短尖苔草而言,水位变化对其生长特征有显著影响(P0.05),如株高和总生物量随着水位的降低而增加;分株数和总芽生物量等克隆繁殖特征则随水位的降低而减少,而水位对低程区短尖苔草的分株总生物量和总芽数影响不显著(P0.05)。因此,短尖苔草的克隆繁殖特征除受到水位的影响外,还受其分布高程的影响。可见,同一种短尖苔草因长期适应于不同生境而对相同的环境胁迫表现出了不同的生长繁殖策略,     

Modelling of aerobic growth of Saccharomyces cerevisiae in a pH-auxostat

A model for growth and overflow metabolism of Saccharomyces cerevisiae was applied to simulate continuous cultivations in a pH-auxostat. The concentrations of glucose, biomass and ethanol are controlled by the flow ratio r between fresh medium and titrant solution, both of which are pH-regulated. A critical value of r could be derived, below which the culture becomes substrate depleted, resulting in a stop-flow condition with retained biomass but without growth. At r-values slightly above the critical value the pH-auxostat is substrate limited and unstable. Further increase of the r value results in a stable continuous culture growing at w_max. Thus, the pH-auxostat complements the chemostat in the growth range at or close to w_max. Even at w_max conditions, the ethanol concentration can be controlled at a low level.     

Der substratlimitierte pH-Auxostat – Eine neue Methode zur kontinuierlichen Kultur

A method for continuous cultivation of microorganisms is demonstrated, the substrate limited pH-auxostat. The limiting substrate only is added with constant velocity. In this culture the cells grow with high utilization of the limiting substrate and with the highest specific growth rate possible at the given conditions. Yield coefficients and dilution rates of stable K⁺-limited steady states in yeast cultures with different pH-values and biomass concentrations were measured.     

Development and population structure of mixed (S + M) Pseudomonas aeruginosa cultures in the late stationary growth phase

Population growth, the ratio between dissociants, pH, and levels of reducing sugars in the medium were monitored during prolonged (375 h) batch cultivation of Pseudomonas aeruginosa S and M dissociants on mineral medium with glucose. During the stationary growth phase (100-375 h), two scenarios were possible. The first one included extensive cell autolysis coupled to alkalinization of the medium and an increased ratio of the M dissociant. In the second case, acidification of the medium was coupled to the oscillating secondary growth, mostly of the M dissociant; the dynamics of cell numbers of this dissociant correlated with the dynamics of the culture optical density. In this scenario, periodical appearance of reducing sugars in the medium was detected; it was in the opposite phase with the changes of the M dissociant cell numbers. The differences between scenarios of P. aeruginosa growth in the late stationary phase were probably due to the physiological and biochemical characteristics of the S and M dissociants, including different pathways of glucose utilization (respiration or fermentation), resistance to acidification, synthetic (proteolytic) activity, and productivity of autoinducers.     

Physiological state of a microbial community in a biomass recycle reactor

The transition in physiological state was investigated between a carbon-limited chemostat population and microbes growing very slowly in a biomass recycle reactor. The mixed microbial population was metabolizing a mixture of biopolymers and linear alkylbenzene sulfonate, formulated to represent the organic load in graywater. Biomass increased 30-fold during the first 14 days after a shift from chemostat to biomass recycle mode. The ratios of ATP and RNA to cell protein decreased over the first days but then remained constant. The specific rate of CO₂ production by microbes in the reactor decreased 6-fold within 24 h after the shift, and respiratory potentials declined 2–3 fold during the first 7 days. Whereas chemostat cultures used equal proportions of organic carbon substrate for catabolism and anabolism, the proportion of organic substrate oxidized to CO₂ rose from 62 to 82% over the first 8 days in a biomass recycle reactor, and eventually reached 100% as this reactor population exhibited no net growth. Biomass recycle populations removed from the system and subjected to a nutritional shift-up did not immediately initiate exponential growth. The physiological state of cells in the biomass recycle reactor may be distinct from those grown in batch or continuous culture, or from starved cells. Received 02 June 1997/ Accepted in revised form 20 February 1998     

Effects of Elevated CO2 and Temperature on Biomass Growth and Allocation in a Boreal Bioenergy Crop (Phalaris arundinacea L.) from Young and Old Cultivations

An auto-controlled climate system was used to study how a boreal bioenergy crop (reed canary grass, Phalaris arundinacea L., hereafter RCG) responded to a warming climate and elevated CO₂. Over one growing season (April–September of 2009), RCG from young and old cultivations (3 years [3-year] and 10 years [10-year]) was grown in closed chambers under ambient conditions (CON), elevated CO₂ (EC, approximately 700 μmol?mol^?1), elevated temperature (ET, ambient + approximately 3 °C) and elevated temperature and CO₂ (ETC). The treatments were replicated four times. Throughout the growing season, the above-ground (leaf and stem biomass) and below-ground biomasses were measured six times, representing various developmental stages (early stages: the first three stages, and late stages: the last three stages). Compared to the growth observed under CON, EC enhanced RCG biomass growth over the whole growing season (p?<?0.05), whereas ET increased RCG biomass growth in early stages but decreased growth in late stages, regardless of the cultivation age. However, the negative effect of ET later in the growing season was partially mitigated by CO₂ enrichment. Compared to CON plants, the final total biomass was 18 % higher for 3-year plants and 8 % higher for 10-year plants grown under EC. In comparison, for 3-year and 10-year plants, the biomass was 5 and 3 % lower under ET and 7 and 4 % greater under ETC, respectively. Under EC, the below-ground growth contributed more to the total biomass growth compared to the above-ground portion. The opposite situation was observed under ET and ETC. The climate-related changes in biomass growth were smaller in the old cultivation than in the young cultivation due to the lower net assimilation rate and lower specific leaf area in the old cultivation plants.     

Growth of yeast Candida utilis in crotonaldehyde containing media

Summary The inhibitory influence of the higher concentration of 20butenal, crotonaldehyde was followed during the batch and long-term continuous fermentation of Candida utilis growing on synthetic ethanol. Most crotonaldehyde is removed from the medium by biotransformation. Crotonaldehyde inhibits the growth, lengthens the lag phase and decreases the biomass yield and the content of crude proteins in the biomass. The yeast C. utilis is capable of growing on media containing very high concentrations of inhibitor in the in-flow during continuous cultivation. Uncharacteristic transport oscillations of the content of crotonaldehyde were observed for which acidic groups on the cell membrane are probably responsible. A sensitive method which is suitable for measuring very low concentration of crotonaldehyde in aqueous solutions is described. Crotonaldehyde acts as an uncompetitive inhibitor with slight mixed type of inhibition. An equation describing the kinetics of inhibition was derived.     

A simple structured model for biomass and extracellular enzyme production with recombinant Saccharomyces cerevisiae YPB-G

A simple structured model is proposed for simulating batch cultivation data on growth, substrate utilization, and heterologous enzyme production of recombinant Saccharomyces cerevisiae YPB-G. The enzyme is a fusion protein displaying α-amylase and glucoamylase activities. Cell growth is modulated mainly by intracellular substrate and ethanol concentrations. Intracellular substrate concentration is evaluated by means of the extracellular substrate and biomass concentrations. Extracellular α-amylase and glucoamylase activities are taken to depend on biomass concentration. The nine parameters of the proposed model are determined using nonlinear estimation techniques, and the model is validated against experiments not used in parameter determination. The model developed simulates glucose consumption, cell mass, α-amylase and glucoamylase production in a batch system. Simulation and experimental results are found to be in good agreement. Journal of Industrial Microbiology & Biotechnology (2002) 29, 111–116 doi:10.1038/sj.jim.7000281 Received 07 January 2002/ Accepted in revised form 22 May 2002     

Effect of reduced concentrations of carbon, nitrogen, and phosphorus in a medium on growth of three dissociants of Pseudomonas aeruginosa]

The effect of lowered concentrations of carbon, nitrogen, and phosphorus sources in the medium on the specific growth rate mu of the R, S, and M dissociants of the hydrocarbon-oxidizing strain Pseudomonas aeruginosa K-2, culture pH, and the population composition was studied. Within the first 16 hours of cultivation in all of the four media tested, the R, S, and M dissociants had virtually identical mu. The maximal values of mu were reached by the 20th h of growth in the basal medium (R and S dissociants) and in the carbon-deficient medium containing 0.4% glucose (M dissociant). The R and M dissociants showed the most rapid decrease in mu in the nitrogen-deficient medium containing 0.55% NaNO3. By the end of cultivation in the basal medium, the pH of the R, S, and M cultures decreased to 6.3, 5.3, and 3.3, respectively. In the case of the carbon-deficient medium, the drop in the culture pH was lower. After a 2.5-day incubation of the S dissociant in the phosphorus-deficient medium containing 0.028% NaH2PO4.2H2O and of the M dissociant in the basal medium supplemented with chalk powder, these dissociants were completely displaced from the media.     

A simple feedback control of Escherichia coli growth for recombinant aldolase production in fed-batch mode

Fed-batch production of recombinant fuculose-1-phosphate aldolase (FucA) by Escherichia coli XL1 Blue MRF′ (pTrcfuc) has been automated by using a simple feedback specific growth rate control strategy. Non-induced continuous cultures were conducted in order to characterize substrate consumption and carbon dioxide production yields and rates. In fed-batch cultures, substrate feeding rate was adjusted using on-line biomass estimation based on exhaust gas analysis and macroscopic mass balances. Overexpression of recombinant protein induced by isopropyl-β-d-thiogalactopyranoside (IPTG) under trc promoter did not affect significantly the control of specific growth rate during 7 h after induction. Growth and protein production curves were parallel until high level of protein expression started to inhibit cell growth. The proposed specific growth rate control strategy has been successfully applied to both non-induced and induced fed-batch cultures that do not exhibit severe growth rate depression.     

The kinetics of glycol destruction by a Pseudomonas putida BS-2 strain]

Destruction of ethylene glycol and diethylene glycol by Pseudomonas putida BS-2 culture under conditions of its batch cultivation has been studied for its physiological regularities. The specific rate of the biomass growth in the region of limiting substrate concentrations depends on the diethylene glycol concentration in the medium and follows the Mono equation. A semisaturation constant for diethylene glycol is 209 +/- 17 mg/d. The specific rate of the culture growth is independent of the ethylene glycol concentration in the medium within a wide range from 0.08 to 10 g/l. Kinetics of the bacteria growth inhibition by excess of substrates is a complex character and obeys none of the known models of the substrate inhibition.