马鹿阿拉善亚种遗传多样性和群体结构

马鹿阿拉善亚种（Cervus elaphus alashanicus）又称阿拉善马鹿,目前仅分布于贺兰山地区,是我国马鹿亚种分布范围最狭窄的一个隔离种群。为了解阿拉善马鹿的种群遗传多样性及遗传变异情况,以对该种群的保护提供科学参考,对在贺兰山采集的93个野生个体新鲜粪便样本的线粒体控制区部分序列（991 bp）进行扩增和分析,共检测到68个变异位点,定义16种单倍型,平均单倍型多样性为0.405,平均核苷酸多样性为0.00232,说明种群遗传多样性水平较低。中性检验和错配分布分析表明阿拉善马鹿曾出现过种群扩张,贝叶斯天际线分析（BSP）显示扩张时间约在末次冰盛期（0.028—0.010 Ma）。FST检验表明阿拉善马鹿种群内存在显著遗传分化,系统发育树和单倍型网络图分析表明群体间没有明显的系统地理格局。本研究表明阿拉善马鹿目前种群遗传多样性较低,建议加大对该亚种的关注和保护力度。       

中国圈养梅花鹿的遗传多样性和遗传结构

东北梅花鹿(Cervus nippon hortulorum)的野生种群已濒临灭绝,但其圈养种群遍布全国各地,是我国圈养梅花鹿的主要品种(亚种)。为了探讨圈养梅花鹿种群作为东北梅花鹿野外放归项目资源种群的可行性,测定了来自9个圈养种群45只梅花鹿个体的线粒体DNA控制区的部分序列,以此分析我国圈养梅花鹿种群的遗传多样性和遗传结构。结果表明,我国圈养梅花鹿种群的遗传多样性并不贫乏,种群之间并没有发生显著的遗传分化。因此,东北地区的圈养梅花鹿种群可以作为野外放归项目的资源种群,而野外放归项目的建群者应来源于东北地区的多个圈养种群。     

异源四倍体鲫鲤群体遗传多样性的RAPD分析

湖南师范大学和湘阴县东湖渔场合作,经过10多年的研究,获得了两性可育的异源四倍体鲫鲤群体1—7,目前已经繁殖到了F14。异源四倍体鲫鲤具有4套染色体(4n=200),它们的遗传多样性水平怎么样?这是关系到异源四倍体鲫鲤这一新的种质资源能否生存和进化的问题,有必要从分子水平进行深入的研究。随机扩增多态DNA(Random Am-plified Polymorphic DNA,RAPD)是建立在PCR基础之上的一种DNA分子标记技术8,具有简便、快速、实验成本低等特点,因此被广泛应用于物种的遗传多样性分析、亲缘关系的探讨和系统进化等方面的研究9—15。本研究采用RAPD技术,检测了异源四倍体鲫鲤群体的遗传多样性水平,以期为异源四倍体鲫鲤的人工繁殖、种群复壮以及种质资源保护提供DNA水平上的依据。       

东山湾及其邻近海域游泳动物多样性的分析

根据2009年11月至2010年8月在东山湾及其邻近海域的调查资料,统计渔获物物种组成,计算该海域各物种的相对重要性指数(IRI)、相对资源密度、Margalef种类丰富度指数、Shannon-Weiner种类多样性指数以及Pielou均匀度指数,并分析其时空分布特征。结果表明,东山湾及其邻近海域的物种组成比例与台湾海峡大体一致。秋冬春夏4个季度优势种种类数均较少,分别为4、2、1、3种,且季节更替明显。不同季节多样性指数表现为夏季>春季>秋季>冬季,各季Margalef种类丰富度均值为3.54,Shannon-Weiner种类多样性均值为1.99,Pielou均匀度均值为0.71;各调查站位Margalef种类丰富度均值为7.87,Shannon-Weiner种类多样性均值为2.94,Pielou均匀度均值为0.75,表明该海域生物多样性处于较低水平。分析东山湾及其邻近海域游泳动物多样性,可为今后开展海洋工程建设渔业资源损益评价、生态环境修复工作和基于生态系统的渔业和海洋管理策略提供科学依据。     

东北地区狍种群的遗传多样性研究

狍为我国重要的经济动物,并且是国家一级保护动物东北虎的主要猎物之一。因此,深入了解狍各地理单元内种群的遗传变异,可以为我们制定保护管理策略提供依据,进而使珍稀濒危物种得到有效的保护和管理。本文对88个不同狍个体(来自8个不同地点)的线粒体DNA控制区的部分序列进行了测定和群体分析,获得了463bp的片断,并检测到59个变异位点,占分析长度的7.84%,且这59个变异位点皆为碱基置换,未出现碱基插入或缺失的现象,定义了30种单倍型,核苷酸多样性平均值为0.02641,种群总体遗传多样性较高。从Tajima’sD和FuandLi’sD值的估算结果来看,这8个狍种群相对于中性进化的歧异度并没有明显的偏离(P0.1),没有明显的证据显示这8个狍种群间存在很强的平衡选择。30个单倍型整体上将东北狍种群分为3个亚群,分子变异分析表明3个亚群间基因流Nm均大于1,说明这3个狍亚群间存在着基因流。     

塔里木马鹿(Cervus elaphus yarkandensis)遗传结构及遗传多样性分析

目的:塔里木马鹿(Cervus elaphus yarkandensis)为马鹿的新疆特有亚种,自20世纪50年代以来,由于自然和人为因素影响,种群数量急剧下降,现已隔离成3个孤立的小种群,即沙雅种群、尉犁种群和且末种群.为了更好地保护这一濒危野生动物.方法:基于塔里木马鹿线粒体控制区部分序列对3个种群的控制区结构和遗传多样性进行了研究.结果:在34个序列比对中得到342bp的片段,含变异位点12个,占分析序列长度的3.51%,由此定义了6个单倍型.显示出3个种群总的核苷酸多样性较低(0.01351±0.00063),单倍型多样性较高(0.693±0.051);就单个种群而言,且末种群的遗传多样性最低,而沙雅种群最高.从Tajima's D和Fu and Li's D值的估算结果来看,塔里木马鹿尉犁和沙雅种群相对于中性进化的歧异度并没有明显的偏离(P>0.1),且末种群则出现了明显的偏离(分别为P<0.05和P<0.02),这预示着3个塔里木马鹿种群间可能存在一定的平衡选择.分子变异分析表明,沙雅和尉犁种群间基因流Nm大于4,说明这2个塔里木马鹿种群间存在着非常丰富的基因流,且末种群分别与沙雅、尉犁种群间基因流Nm均小于1,而且末种群分别与沙雅和尉犁种群产生了明显的遗传分化(Fst分别为0.409;0.718,P值均小于0.001),以及3个塔里木马鹿种群单倍型间的序列差异为0.012.结论:以上数据都显示了3个塔里木马鹿种群的单倍型间已经出现了明显分化.结合系统发生关系分析,应将沙雅种群和尉犁种群联合建立管理单元进行重点保护.     

中国胭脂鱼线粒体控制区遗传多样性分析

利用PCR技术扩增了采自长江宜昌江段和清江的8尾中国胭脂鱼线粒体DNA控制区全序列,研究发现该种具有脊椎动物线粒体控制区的一般结构,在获得的958bp的碱基序列中,共检测出32个多态性核苷酸变异位点,多态位点比例为0.033。核苷酸的变异位点除一个为缺失外,其余全部为碱基转换。变异位点主要集中在55-365bp高变异区,而其他区域突变稀少,个体的变异在0-1.36%之间,表现出较大的个体多态性差异。中国胭脂鱼的线粒体控制区的变异远大于美国胭脂鱼（Moxostoma robustum)的0.016。     

白鱼线粒体DNA控制区结构和种群遗传多样性分析

用特异性引物对白鱼（Anabarilius grahami）DNA进行PCR扩增,获得了白鱼线粒体DNA控制区基因全序列（930 bp）。控制区T、C、A和G碱基组成为29.8%、22.5%、33.0%和14.7%。对照其他已报道的鱼类控制区结构,对白鱼控制区结构进行了分析,识别了其终止序列区、中央保守区和保守序列区,找到了终止相关的序列TAS以及保守序列（CSB-F、CSB-D、CSB-1、CSB-2、CSB-3）。同时运用DNA分析软件对白鱼一个驯养种群（中国科学院昆明动物研究所珍稀鱼类繁育中心）及两个自然地理种群（江川县明星鱼洞、江川县牛摩村）进行了遗传多样性分析。结果显示：两个自然种群存在较强基因交流,未出现遗传分化;人工驯养种群遗传多样性最高,种群复壮程度较好。     

白鱼线粒体DNA控制区结构和种群遗传多样性分析

用特异性引物对白鱼(Anabarilius grahami)DNA进行PCR扩增,获得了白鱼线粒体DNA控制区基因全序列(930bp)。控制区T、C、A和G碱基组成为29.8%、22.5%、33.0%和14.7%。对照其他已报道的鱼类控制区结构,对白鱼控制区结构进行了分析,识别了其终止序列区、中央保守区和保守序列区,找到了终止相关的序列TAS以及保守序列(CSB-F、CSB-D、CSB-1、CSB-2、CSB-3)。同时运用DNA分析软件对白鱼一个驯养种群(中国科学院昆明动物研究所珍稀鱼类繁育中心)及两个自然地理种群(江川县明星鱼洞、江川县牛摩村)进行了遗传多样性分析。结果显示:两个自然种群存在较强基因交流,未出现遗传分化;人工驯养种群遗传多样性最高,种群复壮程度较好。     

江西井冈山地区灰胸竹鸡的遗传多样性研究

灰胸竹鸡Bambusicola thoracica是我国特有鸟类.本文采用聚合链式反应和直接测序的方法测定井冈山地区灰胸竹鸡3个种群线粒体DNA(mtDNA)控制区1142 bp的序列,分析其序列变异和种群遗传多样性.30个样本共发现16个变异位点和10种单倍型,其中hapl广泛分布,占所分析样本的23.33%,是其祖先单倍型.3个种群的平均单倍型多样性和核苷酸多样性分别为0.815和0.00243.青原区种群与其它两个种群遗传分化显著,基因交流受限制.受隔离影响,青原区种群遗传多样性最低.在系统发生树上,10种单倍型形成两支,井冈山种群和永新县种群聚在一起,与其地理位置相一致.     

台湾海峡及其邻近海区单肢水母属的研究(丝螅水母目,高手水母科)

记述了台湾海峡及其邻近海区高手水母科Bougainvillidae Lutken,1850单肢水母属Nubiella Bouillon,1980 6新种和1新组合,即棍棒单肢水母Nubiella claviformis Xu,Huang et Lin,sp.nov.,间腺单肢水母N.intergona Xu,Huang et Lin,sp.nov.,大胃单肢水母N.macrogastera Xu,Huang et Lin,sp.nov.,大腺单肢水母N. macrogona Xu,Huang et Guo,sp.nov.,口刺单肢水母N. oralospinela Xu,Huang et Guo,sp.nov.,乳突单肢水母N. papilaris Xu,Huang et Guo,sp.nov.和阿尔单肢水母N.alvarinoae(Segura,1980)comb.nov.,并讨论了它们与近缘种的区别,同时将单肢水母属已知种作个检索表.模式标本保存在厦门大学海洋学系.     

台湾海峡及其邻近海区珍妮水母属的研究(丝螅水母目,面具水母科)

记述了台湾海峡及其邻近海区面具水母科Pandeidae Haeckel,1870珍妮水母属faniopsis Bouillon,1980 5新种,即顶斑珍妮水母faniopsis apicispottis Xu,Huang et Lin,Sp.nov.、短距珍妮水母f.brevispura Xu,Huang et Guo,sp.nov.、大球珍妮水母f.macrobulbosa Xu,Huang et Guo,sp.nov.、南沙珍妮水母f.nanshaensis Xu,Huang et Lin,sp.nov.和蹄形珍妮水母f.unguliformis Xu,Huang et Lin,sp.nov.;并讨论了它们与近缘种的区别,同时将珍妮水母属已知种作个检索表.模式标本保存在厦门大学海洋学系.     

台湾海峡鱼类物种多样性研究回顾

台湾海峡位于中国福建和台湾岛之间, 其特殊的海洋环境使得其鱼类物种多样性水平较高并独具特色。本文综述了台湾海峡鱼类物种多样性研究的历程和成果。20世纪以来, 台湾海峡鱼类物种多样性的研究可以划分为早期研究时期、研究起步时期、系统调查时期和综合研究时期4个阶段, 从最初以新种描述为主的零星报道, 到大规模系统性的综合调查和研究; 目前为止, 大陆文献共记录台湾海峡鱼类1390种, 台湾地区文献共记录鱼类1525种, 总计台湾海峡鱼类1697种。这些种类多数为暖水性广布种, 鱼类区系以印度-西太平洋暖水区的印度-马来亚区和中-日亚区过渡海区种为主; 今后台湾海峡鱼类物种多样性的研究应加强两岸合作, 并充分发挥数据库应用的优势地位。     

SEABIRDS OF THE SENEGAL UPWELLING AND ADJACENT WATERS

Seabird distributions were observed off Senegal during the upwelling season there, in February-March 1976, and are interpreted against an oceanographic background. Gannets Sula bassana , Pomarine Skuas Stercorarius pomarinus , Great Skuas Catharacta skua , Lesser Black-backed Gulls Larus fuscus , Black-headed Gulls L. ridibundus , Sandwich Terns Sterna sandvicensis and Royal Terns S. maxima were the dominant species on the shelf and slope adjacent to the inshore upwelling zone. Grey Phalaropes Phalaropus fulicarius were the only seabirds associated with an oceanic 'front' farther offshore; it is suggested that this and similar boundary zones are important feeding areas during the pelagic phase of this species' annual cycle.
Leach's Storm-Petrels Oceanodroma leucorhoa were seen east to 20W, but the predominant storm-petrel of the waters between 23W and the continental slope was the Madeiran O. castro. It is suggested that the hatching period of Madeiran Storm-Petrels on the Cape Verde Islands is timed to take advantage of the arrival there of young fish in the surface waters, spawned off the African coast and drifted offshore. However Madeiran Storm-Petrels make no direct use of the coastal upwelling; nor do Little Shearwaters Puffinus assimilis or White-faced Storm-Petrels Pelagodroma marina , the other winter-breeding Cape Verdes seabirds, which probably feed close to the Islands.
The Senegal upwelling is underexploited by seabirds, in contrast to comparable upwelling systems elsewhere. It is suggested that this is due to the seasonal timing of the upwelling, the scarcity of secure nest-sites for breeding seabirds, and the competing attractions of the Benguela upwelling in the South Atlantic.     

台湾海峡西部海域哺乳动物化石

本文简要记述了出自台湾海峡西部海域的170件哺乳动物化石,其中的102件分属于Ursussp,Elephasmaximus,Dicerorhinussp,Cervusunicolor,Cervusnippon,Sussp,和Bubalusbubalus,时代为更新世晚期;67件属全新世早期,包括Cetaceagen.etsp．idet,Elephassp,SusscrofaCervusunicolor和Cervusnippon等;属于第三纪晚期的仅有1件鹿超科角化石。台湾海峡西部海域更新世晚期和全新世早期的哺乳动物组合不同于已知的我国海域其他地点的哺乳动物组合,也异于福建中、西部山区的哺乳动物组合。     

河鲈养殖与野生群体遗传多样性比较分析

正河鲈(Perca fluviatilis),又名五道黑,五彩斑鱼,于比利牛斯半岛以外的全欧洲,以及黑海、里海和咸海等水系广泛分布,是我国乌伦古河水系及额尔齐斯河的主要土著鱼类。为鲈形目(Perciformes)、鲈亚目(Percoidei)、鲈科(Percidae)、鲈属(Perca)的一种名贵肉食性冷温带淡水鱼~[1]。     

OPEN-BOAT WHALING ON THE STRAITS OF GIBRALTAR GROUND AND ADJACENT WATERS

Logbooks ( n = 317) from whaling expeditions made in the North Atlantic during the 19th century were examined to investigate activity in the Gibraltar Straits grounds. At least forty expeditions of whaling vessels from European and American ports visited the area. In all cases the main target was the sperm whale, but pilot whales, dolphins, sea turtles, and even a blue whale were also taken. Whaling effort concentrated on the Atlantic side of the Straits; only two expeditions ventured into the Mediterranean Sea, obtaining negligible catches. The whaling season extended during spring and summer and peaked in June–July. This seasonality appeared not to be governed by changes in whale density but by the trade winds necessary to sail southward or westward to cross the Atlantic. Searching effort continued while trying out, but the rate of sighting cetaceans was about half that of searching periods. However, the rate of sighting or capturing a sperm whale remained unchanged during processing, probably because the gregarious habits of the species produced clumping of catches. For every whale secured, 1.31 whales were struck. After correcting for struck but lost whales and for "gammed" vessels, the minimum number of removals of sperm whales during 1862–1889 is estimated at 237.     

汉坦病毒抗原性差异及其基因分型

用抗汉坦病毒单克隆抗体（Ｍｃ－Ａｂ）对汉坦病毒Ｂ７８株（来自病人血）和Ｒ１７８株（分离自褐家鼠）进行间接免疫荧光试验,以分析病毒的单克隆抗体反应谱,又用病毒免疫血清进行交叉中和试验,结果表明,两株病毒均具有双型（Ⅰ型／ＨＴＮ型和Ⅱ型／ＳＥＯ型）反应特征,但Ｒ１７８株基本上属于Ⅰ型。用汉坦病毒Ⅰ￣Ⅳ型型特异性引物进行ＰＣＲ扩增,Ｂ７８株用Ⅰ型和Ⅱ型引物均得到特异性扩增,而Ｒ１７８株虽经重复扩增均未见     

THE EFFECTS OF KIN-STRUCTURED COLONIZATION ON NUCLEAR AND CYTOPLASMIC GENETIC DIVERSITY

We investigate kin-structured migration and its effects on patterns of genetic variation in cytoplasmic and nuclear genomes. We show that colonization events involving close relatives, such as those that might characterize range expansion and the invasion of new habitats, can change the patterns of nuclear and cytoplasmic genetic variation expected at equilibrium. The difference in the patterns of variation between the nuclear and mitochondrial genomes suggests that it may be possible to estimate the time of the effective kin-structured colonization event. Observations in several taxa are discussed in light of these findings and in relation to their known geological history.     

GENETIC DIVERSITY IN GOSSYPIUM HIRSUTUM AND THE ORIGIN OF UPLAND COTTON

Gossypium hirsutum has a large indigenous range encompassing most of Mesoamerica and the Caribbean, where it exhibits a diverse array of morphological forms spanning the wild-to-domesticated continuum. Modem, highly improved varieties (“Upland cotton”), which currently account for about 90% of world cotton commerce, are day-length neutral annuals derived from subtropical, perennial antecedents. To assess levels and patterns of genetic variation in the species and to elucidate the origin of Upland cotton, 538 accessions representing the full spectrum of morphological and geographical diversity were analyzed forallozyme variation at 50 loci. Levels of variation are modest overall but are low in Upland cotton. Relationships among accessions reflect pre-Columbian influences of aboriginal peoples and later European colonists superimposed on the preagricultural pattern. In contrast to expectations, two centers of diversity are evident, one in southern Mexico-Guatemala and the other in the Caribbean. Introgression of G. barbadense genes into G. hirsutum has been common in a broad area of sympatry in the Caribbean. The germplasm of present cultivars traces to Mexican highland stocks, which, in turn, were derived from material originally from southern Mexico and Guatemala. Despite the widespread belief that germplasm from several other species has been incorporated into modem Upland stocks through intentional breeding efforts, the 50 Upland cultivars examined contain no unique alleles, suggesting that retention of genes from transspecific sources has been minimal. The most recent infraspecific treatment, which recognizes seven races, does not adequately represent genetic relationships.