7. SHORT NOTES FROM MEMBERS

Cooper, J., Ross, G. J. B. &; Shaughnessy, P. D. 1978. Seasonal and spatial distribution of Rockhopper Penguins ashore in South Africa. Ostrich 49:40-44. There are 30 records of Rockhopper Penguins Eudyptes chrysocome ashore in South Africa. Both the southern subspecies E.c. chrysocome, and the northern subspecies E.c. moseleyi have been recorded. The northern subspecies has occurred more frequently. Most records are of moulting juveniles in January and February. Records of adult birds are more scattered throughout the year. Rockhopper Penguins in South Africa have been recorded only south of 30S. Birds of the northern subspecies probably originate from South Atlantic islands (Tristan da Cunha group and Gough). Birds of the southern subspecies are probably from the Prince Edward Islands.     

Testing subspecies hypothesis with molecular markers and morphometrics in the Pacific white tern complex

To test the validity of subspecies designations of the white tern, genetic and morphological data were used to assess differences among four putative Pacific subspecies Gygis alba candida , Gygis alba rothschildi , Gygis alba pacifica , and Gygis alba microrhyncha . The origin(s) of a recent colonization of Oahu was also examined using molecular data. Samples were collected from 209 birds, representing island groups of the North and South Pacific. Culmen length and depth, longest and shortest rectrix lengths, and wing chord measurements from an earlier dataset were compared. Mitochondrial DNA variation suggests that there are no phylogenetically distinct species within the Pacific Ocean. The genetic and morphological similarity of G. a. candida and G. a. rothschildi warrants merging them into one subspecies ( G. a. candida ). Gygis alba microrhyncha and G. a. pacifica are distinctly smaller and larger than the other two subspecies, respectively, but are not completely diagnosable across the morphological characters examined. Although the Pacific subspecies do not exhibit reciprocal monophyly, there is significant genetic differentiation among the two South Pacific groups, G. a. microrhyncha , G. a. pacifica , and all other Pacific subspecies. This differentiation warrants treating these two South Pacific groups as separate management units, but not species or subspecies. Finally, the recently established population of white terns on Oahu shared haplotypes with all subspecies, suggesting multiple origins from populations across the Pacific and confirming contemporary gene flow.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 98 , 586–595.     

华南梅花鹿的分布和现状

华南梅花鹿(Cervus nippon kopschi) 亚种可能是现存梅花鹿亚种中最濒危的物种。目前主要分布于安徽皖南的泾县、旌德、黟县、宁国,江西的彭泽和浙江的临安等县。 分布的范围仍在不断缩小,种群被隔离,并逐步在分散。本文在野外调查的基础上对该亚种的现在分布区和栖息地的现状进行了分析和描述。由于目前缺乏对华南梅花鹿的生态学和生物学的研究,对该种群尚无有效的保护措施。迫切需要采取有力措施加强对野生梅花鹿的保护。     

A morphometric assessment of geographical variation and subspecies in impala

The single species of Aepyceros, Aepyceros melampus (impala), is native to central and southern Africa, from Uganda to South Africa. It inhabits open woodlands, sandy bush country and acacia savannah. This study tested the morphological and geographical variation among specimens of impala and their possible relation with described subspecies. Nineteen skull and horn measurements were taken. A multivariate analysis was used and size and shape were explored. Facial coat patterns were also coded. The results supported four out of five traditionally described subspecies: Aepyceros melampus petersi from Angola/Namibia, Aepyceros melampus melampus from South Africa, Aepyceros melampus suara from East Africa and Aepyceros melampus johnstoni from Zambia and Malawi. We consider Aepyceros melampus rendilis to be a synonym of suara . A revised synopsis is suggested, with comments on the geographical ranges of the subspecies. Skull dimensions also allowed us to estimate the geographical origin and subspecies of some individuals of unknown provenance. Coat patterns showed no clear relation with subspecies or geographic location, with the exception of A. m. petersi .     

Phylogeography of the bushmaster (Lachesis tnuta: Viperidae): implications for neotropical biogeography, systematics, and conservation

We used mitochondrial gene sequences to reconstruct phylogenetic relationships among subspecies of the bushmaster, Lachesis muta. These large vipers are widely distributed in lowland tropical forests in Central and South America, where three of four allopatric subspecies are separated by montane barriers. Our phylogeny indicates that the four subspecies belong to two clades, the Central American and South American lineages. We use published molecular studies of other taxa to estimate a 'reptilian mtDNA rate' and thus temporal boundaries for major lineage divergences in Lachesis. We estimate that the Central and South American forms diverged 18-6 Mya, perhaps due to the uplifting of the Andes, whereas the two Central American subspecies may have diverged 11-4 Mya with the uprising of the Cordillera de Talamanca that separates them today. South American bushmasters from the Amazon Basin and the Atlantic Forest are not strongly differentiated, perhaps due to episodic gene flow during the Pleistocene, when suitable habitat for this species was at times more continuous. Our results agree with previous evidence that genetic divergence among some neotropical vertebrates pre-dated Pleistocene forest fragmentation cycles and the appearance of the Panamanian Isthmus. Based on morphological, behavioral, and molecular evidence, we recognize three species of Lachesis. In addition to L. muta, the widespread South American form, the Central American forms are treated as distinct species (L. meknocephak and L. stenophrys), each deserving of special conservation status due to restricted distribution and habitat destruction.     

Descriptions of Tachygonetria africana n. sp. and T. pretoriensis n. sp. and redescriptions of two other species of Tachygonetria Wedl, 1862 (Nematoda: Pharyngodonidae), all parasitic in Geochelone pardalis (Testudinidae) from South Africa

Two new species of Tachygonetria, T. africana n. sp. and T. pretoriensis n. sp. are described. Both are parasites of Geochelone pardalis (Bell) from South Africa. In addition, two subspecies, T. longicollis fitzsimmonsi Petter, 1966 and T. macrolaimus macrolaimus (Linstow, 1899), also parasites of Geochelone pardalis (from Pretoria Zoo, South Africa), are redescribed and new information on their morphology is presented. On the basis of their morphology, these subspecies are raised to full specific level.     

Description of a New Subspecies <Emphasis Type="Italic">Zanclorhynchus spinifer heracleus</Emphasis> subsp. nov. from the Ridge of Hercules (Pacific–Antarctic Ridge)

New subspecies of Zanclorhynchus spinifer heracleus subsp. nov. from the Ridge of Hercules (Pacific–Antarctic Ridge) is described. The type series of the new subspecies was caught on both large banks of the ridge (Central Bank and the South Bank) at the depths of 170–380 m. The new subspecies differs from the nominative subspecies in the degree of development of the arming, particularly, by the cranial spines and of the dorsal fin. The key to the Zanclorhynchus species and subspecies is developed and presented.     

Trachemys medemi n. sp. from northwestern Colombia turns the biogeography of South American slider turtles upside down

South America was invaded by slider turtles (Trachemys spp.) twice, with one immigration wave estimated to have reached South America 8.6–7.1 million years ago (mya) and a second wave, 2.5–2.2 mya. The two widely disjunct South American subspecies of Trachemys dorbigni (northeastern and southern Brazil, Río de la Plata region of Argentina and Uruguay) are derived from the first dispersal pulse, while the two South American subspecies of Trachemys venusta (Colombia, Venezuela) originated from the second immigration event. We describe a new species of slider turtle from the lower Atrato river basin of Antioquia and Chocó departments, northwestern Colombia. This new species, the Atrato slider (Trachemys medemi n. sp.), is the first representative of the older immigration wave inhabiting northern South America. Using phylogenetic analyses of 3,242 bp of mitochondrial and 3,396 bp of nuclear DNA, we show that T. medemi is more closely related to T. dorbigni than to the geographically neighboring subspecies of Trachemys grayi and T. venusta from Central America and northern South America. The two subspecies of T. dorbigni are separated from the Atrato slider by the Andes and the Amazon Basin, and occur approximately 4,600 km and 3,700 km distant from T. medemi. According to molecular clock calculations, T. medemi diverged from the last common ancestor of the two subspecies of T. dorbigni during the Pliocene (4.1–2.8 mya), with T. dorbigni diversifying later (2.3–1.9 mya) in eastern South America beyond the Amazon basin. The divergence of the T. dorbigni subspecies overlaps with the estimated arrival of T. venusta in South America (2.5–2.2 mya). This time is characterized by massive climatic and environmental fluctuations with intermittent dispersal corridors in South America. According to their distribution, it seems likely that the ancestors of the extant subspecies of T. dorbigni dispersed along the eastern corridor, leaving a relict population northwest of the Andes with T. medemi. The distribution range of T. medemi is surrounded by taxa derived from the second southern range expansion of slider turtles, so that it can be concluded that T. venusta circumvented the habitats occupied by the ancestors of the Atrato slider when entering South America.     

黑石顶自然保护区两栖动物资源和区系特征的研究

报道了黑石顶自然保护区两栖动物资源和区系特征的调查结果．已知有２１种（包括亚种）１１属７科２目．在２１种两栖动物中,它们都属于东洋界物种,其中华中区和华南区的共有物种占６１．８％,而属华中区的物种占１９．１％属华南区的物种也占１９．１％．还分析了黑石顶自然保护区两栖动物群落的水平分布和垂直分布的特征     

西藏南部8种鸟类的新分布记录

2016年9和10月,在西藏自治区林芝及日喀则开展鸟类多样性调查期间新记录到8种鸟类,包括白胸翡翠指名亚种(Halcyon smyrnensis smyrnensis)、黑冠山雀指名亚种(Periparus rubidiventris rubidiventris)和栗腹?指名亚种(Sitta cinnamoventris cinnamoventris)、斑尾鹃鸠(Macropygia unchall)、红喉姬鹟(Ficedula albicilla)、黄胸柳莺(Phylloscopus cantator)、棕脸鹟莺(Abroscopus albogularis)以及田鹨(Anthus richardi)。     

Cryptic species in a Neotropical parrot: genetic variation within the Amazona farinosa species complex and its conservation implications

The application of genetic approaches has enhanced the identification of cryptic species in a wide variety of taxa, often with immediate conservation implications. Here, we employed multilocus DNA analyses to assess genetic variation and its correspondence to taxonomy within the Mealy Amazon (Amazona farinosa), a parrot species found in Central and South America. DNA sequence data from four mitochondrial regions and two nuclear introns were used to infer relationships among all five named subspecies in this species complex. Two reciprocally monophyletic groups with strong nodal support were found; one comprised of the two Central American subspecies guatemalae and virenticeps and one including all three South American subspecies farinosa, chapmani, and inornata. Molecular characters diagnosed distinct Central American and South American lineages, with an estimated divergence time of 1.75–2.70 million years ago as inferred from cytochrome-b (3.5–5.4 % corrected distance). Our data support recognizing Central American and South American Mealy Amazons as separate species worthy of independent conservation management. Furthermore, our results suggest recognition of two separate management units within the South American clade, although further study is required. These findings have important conservation implications as Central American A. farinosa are under increased pressure from habitat destruction and collection for the pet trade, yet are listed as of Least Concern due to their current classification as subspecies’ subsumed within the species complex.     

Molecular phylogeny of Central and South American slider turtles: implications for biogeography and systematics (Testudines: Emydidae: Trachemys)

We analyse phylogeny, systematics and biogeography of slider turtles (Trachemys spp.) using sequence data of four mitochondrial genes (3242 bp) and five nuclear loci (3396 bp) of most South American and southern Central American taxa and representatives of northern Central American, West Indian and North American slider species (16 species and subspecies) and allied North American species (genera Chrysemys, Deirochelys, Graptemys, Malaclemys, Pseudemys). By applying maximum likelihood, relaxed molecular clock and ancestral range analyses, we provide evidence for two successive colonizations of South America by slider turtles. In addition, we show that the current species delineation of Central and South American slider turtles is incorrect. Our data suggest that Trachemys grayi is a distinct polytypic species that embraces, besides the nominotypical subspecies, T. g. emolli and T. g. panamensis. Trachemys ornata is also polytypic with the subspecies T. o. ornata, T. o. callirostris, T. o. cataspila, T. o. chichiriviche and T. o. venusta. Moreover, T. adiutrix should be regarded as a subspecies of T. dorbigni. All studied Trachemys species are inferred to have originated in the Late Miocene to Early Pliocene. The ancestor of the two subspecies of T. dorbigni colonized South America most probably prior to the establishment of the land bridge connecting Central and South America, whereas the two South American subspecies of T. ornata represent a younger independent immigration wave from Central America.     

华南虎、东北虎、孟加拉虎的D-100p和ND5序列及其在系统进化分析中的应用

本文采用PCR和质粒克隆测序方法,获得了华南虎线粒体D-loop区的480bp序列和东北虎、孟加拉虎线粒体D-loop区的503bp序列;同时还获得了这三个虎亚种和金钱豹线粒体ND5基因5’端309bp的部分序列。根据D-loop序列分析,华南虎与孟加拉虎、东北虎的平均距离(p-distance)分别为0．11088和O．11087,而东北虎与孟加拉虎间的平均距离为0．00994;根据ND5序列分析,华南虎与孟加拉虎、东北虎的平均距离分别为0．11434和0．11758,而东北虎与孟加拉虎间的平均距离为0．00324。三个虎亚种的mtDNA D-loop和ND5序列比较表明,华南虎是这三个虎亚种中最为古老的亚种。     

Song differences between populations of seven subspecies of the African forest weaver Ploceus bicolor Vieillot (Aves: Passeriformes)

We present an analysis of song type differences between populations of seven forest weaver (Ploceus bicolor) subspecies. Phonology and syntax of the melodious parts of song types differ between these populations to the same extent as they differ between population-specific dialects within a subspecies. Phonological and syntactical song features are socially transmitted; they can be transmitted even between representatives of taxonomically different subspecies. The Harsh Call, a complex element embedded in the melody, is of similar structure in populations of four South African subspecies, but shows markedly different characteristics in populations of the subspecies from Kenya and Cameroon. Song differences between populations are suggested to result from cultural drift and geographic isolation. A correspondence between genetically determined morphological structures on the one hand and socially transmitted song structure on the other seems to be a coincidence due to geographic separation.     

Mitochondrial DNA analyses show that Zambia's South Luangwa Valley giraffe (Giraffa camelopardalis thornicrofti) are genetically isolated

Thornicroft's giraffe, Giraffa camelopardalis thornicrofti, is a geographically isolated subspecies of giraffe found only in north‐east Zambia. The population only occurs in Zambia's South Luangwa Valley, an area which interestingly places it between the current distribution of Masai (G. c. tippelskirchi) giraffe to the north, and the Angolan (G. c. angolensis) and South African (G. c. giraffa) giraffe in the south‐west and south, respectively. Specific studies have been undertaken on the ecology of this subspecies, but their population genetics remains unknown. We studied 34 individuals from the South Luangwa National Park and adjacent Lupande Game Management Area and seven individuals from northern Botswana. The complete cytochrome b and control region sequences of the mitochondrial genome were sequenced and analysed together with database data by maximum likelihood tree reconstruction and maximum parsimony network analyses. The giraffe from Zambia's South Luangwa Valley are most closely related to the subspecies G. c. tippelskirchi and part of their radiation. However, they form a unique population that would benefit from increased research and conservation management.     

A preliminary study of the genetic differences in New Zealand oystercatcher species

Abstract

The taxonomy of New Zealand oyster‐catchers is controversial. Some authorities assign full species status to all three oystercatcher taxa breeding in New Zealand, whereas others classify the variable oystercatcher as a full species and the Chatham island oystercatcher and South island pied oystercatcher as distinct only at the subspecies level. The debate is not just of academic interest, as the IUCN lists the Chatham island oystercatcher as endangered and the New Zealand department of Conservation has carried an intensive management programme to conserve it. We obtained genetic data from four regions of the mitochondrial genome of all three taxa, and found support for classifying the Chatham island and South island pied oystercatchers as full species, rather than subspecies.     

Conservation of genetic diversity in British populations of the diploid endemic Coincya monensis ssp monensis (Isle of Man Cabbage): the risk of hybridisation with the tetraploid alien, Coincya monensis ssp cheiranthos

Coincya monensis is represented in the British flora by two, cytologically distinct subspecies. Coincya monensis ssp monensis is an endemic diploid with a coastal sand dune distribution that includes a number of isolated populations. Coincya monensis ssp cheiranthos is a tetraploid alien, well established in South Wales in early successional habitats. Both subspecies share similar life form traits, flowering times and pollinators. Cluster analysis and phylogenetic reconstruction based on sequences of the mitochondrial nad4 gene confirmed the distinction between alien and endemic taxa. Tetraploid populations carry more polymorphic RAPDs loci and their genetic diversity is partitioned more within than among populations. In contrast, C. monensis ssp monensis has a distinct population genetic structure. Analysis of the multilocus genetic data confirmed a structure of genetically isolated, endemic population clusters in Scotland, Arran, the Isle of Man and South Wales. Experimental hybridisation showed the two subspecies are interfertile. Multivariate analysis of RAPDs data resolved hybrids between alien and endemic clusters and hybrids contained a proportion of alien-specific polymorphic loci. Hybrids of alien maternal parentage contained the mitochondrial nad4 sequence characteristic of the alien subspecies. Since the alien subspecies can invade mobile sand dune communities from urban sites and compete for pollinators, there is a risk that alien and endemic populations will mix and introgress. Conservation of endemic genetic diversity in Britain will require protection for all C. monensis ssp monensis populations. Currently, the most disjunct endemic population in South Wales is most at risk from introgression.     

Taxonomy, phylogeny, and biogeogràphy of the genus Oreobolus R.Br. (Cyperaceae), with comments on the biogeography of the South Pacific continents

SEBERG, O., 1988. Taxonomy, phylogeny, and biogeogràphy of the genus Oreobolus R.Br. (Cyperaceae), with comments on the biogeogràphy of the South Pacific continents. The genus Oreobolus R.Br. (Cyperaceae) is revised. Fourteen species and three subspecies are recognized; two subspecies are described as new, O. obtusangulus subsp. unispicus and O. oxycarpus subsp. brownii; and a new subspecies combination is made, O. pumilio subsp. clemensiae. Comments are given on the classiciation and choice of phylogenetic and biogeographic methods. The sister-group of the genera Oreobolus and Schoenoides (which has recently been segregated from Oreobolus) is a subset of Costularia subgenus Costularia. Oreobolus is hypothesized to be monophyletic, and a phylogenetic hypothesis, based on a parsimony method, is presented. The scale-like tepals of Oreobolus are hypothesized to be apomorphic. Current vicariance biogeographic hypotheses on the relationships of the South Pacific continents are shown to be premature. Brief accounts are given on nomenclature, aspects of morphology, chromosome numbers, geographical distribution, and ecology.     

Development of a Monoclonal Antibody Detection Assay for Species-Specific Identification of Abalone

Species identification based on biochemical and molecular techniques has a broad range of applications. These include compliance enforcement, the management and conservation of marine organisms, and commercial quality control. Abalone poaching worldwide and illegal trade in abalone products have increased mainly because of the attractive prices obtained and caused a sharp decline in stocks. Alleged poachers have been acquitted because of lack of evidence to correctly identify species. Therefore, a robust method is required that would identify tissue of abalone origin to species level. The aim of this study was to develop immunologic techniques, using monoclonal and polyclonal antibodies, to identify 10 different abalone species and subspecies from South Africa, the United States, Australia, and Japan. The combination of 3 developed monoclonal antibodies to South African abalone (Haliotis midae) enabled differentiation between most of the 10 species including the subspecies H. diversicolor supertexta and H. diversicolor diversicolor. In a novel approach, using antibodies of patients with allergy to abalone, the differentiation of additional subspecies, H. discus discus and H. discus hannai, was possible. A field-based immunoassay was developed to identify confiscated tissue of abalone origin.     

Eine neue tropische Unterart von Keratella cochlearis (Rotatoria)

A new subspecies of Keratella cochlearis, viz. Keratella cochlearis pachyacantka is described. It has been recorded from Africa and South America.