Structural, technological and productivity analyses of rainbow trout (Oncorhynchus mykiss) farms in the Marmara region, Turkey

This study analyses the structural, technological performance components and the overall productivity of inland rainbow trout ( Oncorhynchus mykiss ) farms in the Marmara region, Turkey. Of 81 active farms, 36 were small scale (1–10 t year⁻¹), 32 medium-sized (11–30 t year⁻¹) and 13 large production units (over 30 t year⁻¹). Sufficient data for this study were collected from 70 farms for inclusion in the analyses; 59.3% were so-called combined farms (hatchery and grow-out), 37.9% on-growing farms (for market production) and 2.9% producing juvenile fish only for stocking or for supply to grow-out farms. Juvenile fish production was largely conducted on large farms. Capacity utilization (102.8%) of the large farms was most similar to their projected capacity. Many large farms (43.9%) use high-tech utilities and tools. Small farms mostly use concrete ponds whereas most medium and large-scale farms use fiberglass tanks. Medium and large-scale farms were found to be more successful in broodstock management, fertilization, hatching success and survival rate of juvenile fish. Fish stocking density in medium-sized farms (21.8 kg m⁻³) was higher than in small-scale (14.5 kg m⁻³) and large-scale farms (15.5 kg m⁻³). Overall feed conversion ratio for all farms was estimated as 1.2. From the survey results it appears that production capacity planning was calculated more accurately in the projection phase for small and large-scale farms rather than for medium-sized farms. Medium and large-scale farms were more successful in terms of performance (good experience, good structural and technological capabilities).     

Distribution, status and conservation of Indian gray wolf (Canis lupus pallipes) in Karnataka, India

The Indian gray wolf Canis lupus pallipes is the major large carnivore in the plains of Karnataka, India. We carried out a study on its distribution and status from November 2001 to July 2004. We estimated 555 wolves occupying about 123 330 km² of the state. In the past 40 years, wolves have disappeared from the southern plateau from an area of about 31 801 km². Their distribution is now largely restricted to the north-eastern dry plains. The wolf has also disappeared in recent years from some 'protected areas' such as Melkote Temple Wildlife Sanctuary, and their present population is largely found in 'non-protected' areas. Blackbucks are the only natural prey of wolves in Karnataka, but their density in most parts of the state is extremely low. The major prey species is domestic livestock, especially sheep. The available 'remote area' (forests or rocky terrains) in the wolf-occupied regions determined the status of the wolf. Killing of adult wolves and pups was common throughout the range of the wolf. However, such killings were made largely by local sheepherders with small sheep holdings and not by nomadic shepherds who maintained large sheep herds. The forests in the north-eastern parts of the state exist in small patches every few kilometers. Because each wolf pack ranges over large distances and is by and large a commensal species, we propose that the management of these small forest patches, considering them as components of a larger landscape, is the only effective conservation practice for the wolf. Although existing locally in low densities, because of a large ranging area of a single pack, the seemingly isolated wolf packs can become parts of a large metapopulation, providing a sustainable population.     

Is Atlantic salmon production limited by number of territories?

Thirty Atlantic salmon Salmo salar parr (mean 135 mm total length, L _T) in the River Alta, Norway, were radio‐tagged and tracked during a 11–13 day period. The parr stayed within defined home ranges with a 95% probability of localization within an average area of 1286 m²(241–3484 m²). On average, each parr had overlapping home ranges with 7·7 other parr, and the overlap between pairs of fish covered on average 24% of their home range areas. Mean length of the river stretch used was 90 m (22–383 m). On average, during 38%(16–77%) of the tracking surveys, the fish had moved >10 m since the previous survey. Mean total distance moved during the whole study was 402 m (208–862 m). The Atlantic salmon were most often recorded in riffles, but 27% of the parr alternated between riffles and pools. The extensive movements, flexible habitat utilization and relatively large home ranges, together with the fact that all the parr had home ranges partly overlapping with other radio‐tagged parr, indicate a flexible and variable behaviour and, thereby, a more complex social structure than a rigid defence of a fixed territory. Thus, Atlantic salmon production seems not to be limited by the highest potential number of territories for large parr in a given area.     

Predictability of repeated carnivore attacks on livestock favours reactive use of mitigation measures

1. Predation on livestock is one of the main reasons for low tolerance against large carnivores in many parts of the world. Measures to reduce the conflicts have been developed, but resources for using them are often scarce. If wildlife managers as well as farmers learn more about when the risk of predation on livestock is higher, they will be able to make more effective use of resources for reducing predation.
2. In this study, we tested the hypothesis that the risk of predation on livestock immediately after an attack is higher on the affected farm compared with other farms in the same area. Data on sheep predation by brown bear Ursus arctos , lynx Lynx lynx and wolf Canis lupus in Sweden 1998–2006 were used in the analysis.
3. On depredated farms there was approximately a 55 times higher risk for a repeat predation event within 12 months compared to any other farm in the same area. During the first 5 weeks, 63%, 60% and 50% of the repeat attacks had occurred.
4. We suggest that the main mechanism behind repeat attacks on livestock is that carnivores return to the kill site to feed on carrion. Where livestock are still present and unprotected at the kill site when the carnivore returns, the farms will suffer a higher likelihood of a further attack compared to livestock on other farms. This study uses data from Sweden but we argue that the pattern will be the same in any part of the world where the ranges of livestock and large carnivores overlap.
4. Synthesis and applications . As the risk of an attack is higher directly after an initial attack, it will be more cost-effective to implement measures designed to reduce livestock predation by large carnivores at that time, i.e. within the following 5 weeks. Temporary proactive measures are usually simpler and cheaper than permanent deterrents and we recommend their use wherever resources are limited.     

Multidrug resistance gene deficient (mdr1a–/–) mice have an altered caecal microbiota that precedes the onset of intestinal inflammation

Aim:  To compare caecal microbiota from mdr1a ^–/– and wild type (FVB) mice to identify differences in the bacterial community that could influence the intestinal inflammation.
Methods and Results:  Caecal microbiota of mdr1a ^–/– and FVB mice were evaluated at 12 and 25 weeks of age using denaturing gradient gel electrophoresis (DGGE) and quantitative real-time PCR. DGGE fingerprints of FVB and mdr1a ^–/– mice (with no intestinal inflammation) at 12 weeks revealed differences in the presence of DNA fragments identified as Bacteroides fragilis , B. thetaiotaomicron , B. vulgatus and an uncultured alphaproteobacterium. Escherichia coli and Acinetobacter sp. were only identified in DGGE profiles of mdr1a ^–/– mice at 25 weeks (with severe intestinal inflammation), which also had a lower number of total bacteria in the caecum compared with FVB mice at same age.
Conclusions:  Differences found in the caecal microbiota of FVB and mdr1a ^–/– mice (12 weeks) suggest that the lack of Abcb1 transporters in intestinal cells due to the disruption of the mdr1a gene might lead to changes in the caecal microbiota. The altered microbiota along with the genetic defect could contribute to the development of intestinal inflammation in mdr1a ^–/– mice.
Significance and Impact of the Study:  Differences in caecal microbiota of mdr1a ^–/– and FVB mice (12 weeks) suggest genotype specific colonization. The results provide evidence that Abcb1 transporters may regulate host interactions with commensal bacteria. Future work is needed to identify the mechanisms involved in this possible cross-talk between the host intestinal cells and microbiota.     

Nutrient and energy content of freshwater fishes

The analyses of fresh total body homogenates of 2385 freshwater fishes from 17 species originating in natural waters and aquaculture facilities resulted in average values of 19.1–37.8% dry matter, 13.6–18.3% crude protein, 0.8–18.3% crude fat, 0.16–2.17% nitrogen-free extracts (NFE), 2.2–2.9% nitrogen and 0.39–1.02% phosphorus. The gross energy content ranged from 3.83 to 11.49 MJ/kg. With increasing fat content in the fishes, water content decreased and dry matter content increased. Through this interdependence, a significant correlation was found between dry matter and crude fat and energy content (r²=0.92–0.97). The values of crude protein, crude ash, NFE, nitrogen and phosphorus did not show any significant influence on dry matter content (r²=0.0005–0.46). Based on the significant correlation between dry matter and gross energy (gross energy [MJ/kg]=0.0253 dry matter [%]^1.6783), the energy content of freshwater fishes can easily be estimated by the dry matter content in the total body.     

Lipid content and fatty acid composition of target tissues in wild Perca fluviatilis females in relation to hepatic status and gonad maturation

Variation in liver ultra‐structure and composition in relation to energy mobilization was investigated in female perch Perca fluviatilis from the Meuse River between August 2001 and June 2002. In April, just before spawning, the lipo‐somatic index ( I _F) was 0·3%, the gonado‐somatic index ( I _G) was 28% and the total lipid content of the liver was 2·53%. The average areas of lipid droplets and mitochondria were 0·05 and 0·06 μm², respectively. Glycogen supply reached 7·9% of the total area of the hepatocyte. During the sexual resting period, females accumulated energy in perivisceral fat and in the liver to reach 1·6% I _F and 4·85% of liver lipid content in August with lipid droplets average size of 0·09 μm² and glycogen average area of 15%. Liver cells contained a weakly developed rough endoplasmic reticulum (RER) and a great number of small mitochondria (average size 0·02 μm²). The I _G was 0·6% at this time. During the whole annual cycle, the average lipid content of female liver never exceeded 3·9 ± 1·9%. The concentration of docosahexaenoic (DHA), linolenic and linoleic acids increased in mature gonads while linolenic and linoleic acids decreased in the liver during the same period. Fatty acid composition of muscles of perch was characterized by a high content of DHA.     

Tree population dynamics in Kibale National Park, Uganda 1975–1998

Changes in species composition, stem abundance, and basal area of trees taller than or equal to 10 m in a medium altitude tropical rain forest at the Ngogo study area, Kibale National Park, Uganda are described for the period between 1975 and 1998 ( n  = 23 years). Two enumeration episodes were conducted in 263 plots of 5 m by 50 m during 1975–80 and 1997–98. During this period, species richness decreased by 3% (from 92 to 89). Species diversity (H') also declined slightly from 2.97 to 2.86. The number of trees recorded in the sample plots decreased by 8% (from 2545 to 2329), while basal area decreased from 49.48 m² ha⁻¹ to 48.68 m² ha^−1. However, stem abundance and basal area increased for some species.     

Sublittoral abundance and food consumption of Baltic gobies

Two small demersal fishes, the sand goby Pomatoschistus minutus and the common goby Pomatoschistus microps , were quantified on soft bottoms at 20–40 m depth in the Baltic Sea, using a camera placed above the bottom. The largest numbers of gobies were seen following the settlement of young in late summer and autumn. Most recorded fishes were sand gobies. An annual average of 4·7 individuals m⁻²(0·24 g dry mass m⁻²) was recorded in 1983–1985 and 2·5 individuals m⁻²(0·13 g m⁻²) in 1997–1998. Using these densities, the annual goby food consumption was estimated to 100 kJ m⁻² in 1983–1985 and 50 kJ m⁻² in 1997–1998, corresponding to most of the annual macrobenthos production available to the gobies. The resulting goby production, assumed equal to 25% of the food consumed, must have been an important food source for the larger fishes occasionally recorded in the photographs.     

Population dynamics of Bythotrephes cederstroemii in south-east Lake Michigan 1995–1998

1. Population characteristics (density, size, reproductive patterns) of the predatory cladoceran Bythotrephes cederstroemii in south-east Lake Michigan were monitored at an offshore station (110 m) in 1995–98 and at a nearshore station (45 m) in 1997–98.
2. The mean density of B. cederstroemii at the offshore station was generally highest in July–September (145–914 m⁻²) and at the nearshore station in October–November (168–1625 m⁻²). In 1995 and 1998, density was also high at the offshore station in November (211–284 m⁻²). Fish predation may limit B. cederstroemii in nearshore regions in the summer. The maximum annual densities of B. cederstroemii for 1995–98 were generally similar to those reported from the late 1980s, when the species arrived in Lake Michigan.
3. Body size increased rapidly each year to a maximum in August. Thereafter, body size declined and converged for stage-2 and 3 individuals, suggesting food scarcity or size-selective fish predation was affecting large individuals.
4. Most reproduction occurred asexually (90%), and by stage 2 or 3 females (99%). Asexual brood size was highest when B. cederstroemii first appeared each year, and decreased in August, when larger neonates were produced. There appeared to be differences in reproductive mode for stage 2 and 3 females, with a higher percentage of stage 2 females reproducing sexually.     

Denitrification in river sediments: relationship between process rate and properties of water and sediment

1. A survey was made of denitrification and nitrous oxide (N₂O) production in river sediments at fifty sites in north‐east England during one season in order to investigate the relationship between rates and environmental factors likely to influence these processes. The sites were chosen to represent a wide range of physical and chemical conditions. Denitrification rate and N₂O production were measured within 5 h of sampling using the slurry acetylene blockage technique.
2. Denitrification rate ranged from less than 0.005–260 nmol N g^–1 DW h^–1, tending to increase in a downstream direction. N₂O production ranged from negative values (net consumption) to 13 nmol N₂O‐N g^–1 DW h^–1 and accounted for 0–115% of the N gases produced.
3. Denitrification rate and N₂O concentration in the sediment were correlated positively with nitrate concentration in the water column, water content of the sediment and percentage of fine (< 100 μm) particles in the sediment.
4. The variation in denitrification rate was satisfactorily explained (64% total variance) by a model employing measurements of water nitrate and water content of sediments. No simple or multiple relationship was found for N₂O production.     

Constitutive mineralization of low concentrations of the herbicide linuron by a Variovorax sp. strain

The mineralization of the herbicide linuron at concentrations of μg and mg L⁻¹ was studied in liquid batch experiments with Variovorax sp. strain SRS16. The strain was highly efficient at mineralizing a range of linuron concentrations (0.002–10 mg L⁻¹) with 20–60% of the added ¹⁴C-ring-labeled linuron metabolized to ¹⁴CO₂ within hours to days depending on the initial linuron concentration and incubation period. At mg L⁻¹ linuron concentrations the mineralization activity by SRS16 was inducible and a shift to constitutive mineralization activity was apparent with a reduction in the linuron concentration to μg L⁻¹ levels. This study revealed that strain SRS16 is a promising candidate for bioaugmentation of water or soil resources contaminated with low linuron concentrations.     

Potassium dependence and phytoplankton ecology: an experimental study

SUMMARY 1. Unialgal cultures of three species common in the freshwater phytoplankton were used to test limitation of specific growth rate and final yield in defined media of low K⁺ concentration (range <0.3–6 μmol L⁻¹ or mmol m⁻³).
2. Growth rate of the diatom Asterionella formosa was independent of K⁺ concentration above 0.7 μmol L⁻¹. Final yield was dependent on initial concentration when accompanied by K⁺ depletion below this concentration, but not by lesser depletion with more residual K⁺. Analyses of particulate K in the biomass indicated a mean final cell content of 2.8 μmol K 10⁻⁸ cells, approximately 1.0% of the organic dry weight.
3. Less detailed work with the diatom Diatoma elongatum showed no dependence of growth rate or final yield upon the initial K⁺ concentration in the range 0.8–3.2 μmol L⁻¹. The phytoflagellate Plagioselmis nannoplanctica suffered net mortality in the lowest concentration tested, 0.8 μmol L⁻¹.
4. Comparison with the range of K⁺ concentration in natural fresh waters, including a depletion induced by an aquatic macrophyte, suggests that K⁺ is unlikely to limit growth of phytoplankton. Nevertheless, there can be correlation of K⁺ with lake trophy.     

The distribution and population of the Seychelles (Bare-legged) Scops Owl Otus insularis on Mahé: consequences for conservation

This study details the first baseline survey of the Critically Endangered Seychelles Scops Owl Otus insularis , currently only recorded from the 152-km² island of Mahé, the largest and highest island in the granitic Seychelles, western Indian Ocean. A survey was conducted in October 2000–March 2001 using playback of conspecific calls in random squares (500 m × 500 m) with midpoints being at least equal to 100 m asl. Playback was conducted in 159 of a possible 375 squares (42%). Territorial responses were detected in 60 of 159 (38%) squares, which represented an estimated 70 distinct territorial responses. Pairs responded in 51% and single birds responded in 49% of squares where a response was elicited. Scops Owls were more likely to be detected at higher altitudes, in mixed forest, and sympatrically with endemic frogs ( Tachycnemis seychellensis and Sooglossus spp.). Two models were used to predict population: one based exclusively on altitude resulted in a population estimate of 134–159 territories (268–318 individuals) within a 34-km² range, whereas a second incorporating altitude and vegetation, which excluded unsuitable habitat, resulted in an estimate of 125–142 territories (250–284 individuals) in a 31-km² range. We discuss the implications of our findings to the Owl's conservation status and management.     

Vegetation Restoration and Its Effects on Carbon Balance in Guangdong Province, China

The significance of the regional carbon (C) balance of vegetation restoration to global change was studied in Guangdong Province, one of the most populated provinces in China. The percentage of the province in forestland cover increased steadily from 26.23% in 1979 to 50.11% in 1998 owing to restoration of forests. During this period, the area increase in the conifer forest was 424.83 × 10⁴ ha, whereas the area in broad-leaved, mixed, and other forests increased by 68.82 × 10⁴, 18.94 × 10⁴, and 60.46 × 10⁴ ha, respectively. C sequestration by forest soils from 1979 to 1998 was 389.36 Mt, equivalent to 1.43 Pg fixed carbon dioxide (CO₂). The total annual CO₂ sequestration by forests and the soils was 118.05 Mt, which was about half of the annual CO₂ emission in Guangdong. The role of forest management and restoration in improving the carbon balance is discussed.     

Wolf Depredation on Domestic Animals in the Polish Carpathian Mountains

Abstract As wolves (Canis lupus) recover in Poland, their depredation on domestic animals is increasing, as have conflicts between wolves and farmers. From 1998 to 2004, I investigated spatial and temporal patterns of 591 verified incidents of wolf depredation in the eastern part of the Polish Carpathian Mountains. The wolf population I surveyed covered an estimated range of 4,993 km². Depredation occurred over 1,595 km² of that area. Sheep accounted for 84.8% of domestic animals killed by wolves. Depredation on sheep and number of sheep farms attacked by wolves increased between 1998 and 2004 (r² = 0.61, P = 0.04 and r² = 0.89, P = 0.02, respectively). The number of wolf attacks on sheep farms in a given year were negatively correlated to red deer (Cervus elaphus) population numbers (R² = 0.69, P = 0.02). The amount of depredation caused by each of the 4 monitored packs was best explained by farm density in their territories (R² = 0.59, P = 0.004). Number of attacks recorded on farms was positively correlated to distance from the farm to the pack's den and rendezvous sites (R² = 0.16, P = 0.04). Of depredation recorded in the 4 pack's territories I surveyed, 77% occurred in 4 farms with no or inadequate protection. I concluded that wolf depredation in the studied area is opportunistic. Wolf predation intensity is a function of decreasing abundance of red deer, the density of sheep farms, and proximity of farms to the summer activity centers of wolf packs, and it is facilitated by poor husbandry practices. These results can aid in preventing wolf depredation and provide a foundation for a wolf management plan.     

Farm-scale trials to compare the entomopathogenic fungus Beauveria bassiana with pirimiphos methyl + deltamethrin and essential oil of lemon grass for protection of stored cowpea against Callosobruchus maculatus (Coleoptera: Bruchidae)

In trials conducted in Benin, conidia of Beauveria bassiana were evaluated as a control method against the cowpea weevil, Callosobruchus maculatus , in stored cowpea. In the first trial using a high artificial infestation of C.   maculatus in 8-kg batches of cowpea in jerry cans under typical conditions, concentrations of 1 × 10⁹ and 1 × 10¹¹ conidia kg⁻¹ were compared with lemon grass oil at 2 mL kg⁻¹ and the synthetic pesticide mixture of 1.5% pirimiphos methyl + 0.05% deltamethrin at 0.5 g kg⁻¹. After 2 months of storage, seed losses (SD) were 20.63 (5.3)% in the untreated control, 8.04 (3.2)% in the low-dose B.   bassiana group, 3.12 (1.3)% in the high-dose B.   bassiana group, 2.52 (0.4)% in the lemon grass oil group and 0% in the pirimiphos methyl + deltamethrin group. In a second trial with natural infestations in 50-kg batches of cowpea in 200-L drums, treatment with B.   bassiana 1 × 10¹¹ conidia kg⁻¹ was compared with pirimiphos methyl + deltamethrin at 0.5 g kg⁻¹. After 6 months of storage on six farms, losses reached 30.76 (1.5)% in the control, 1.28 (0.2)% in the pirimiphos methyl + deltamethrin group and 3.69 (0.6)% in the B.   bassiana group.     

Climate-induced changes in high elevation stream nitrate dynamics

Mountain terrestrial and aquatic ecosystems are responsive to external drivers of change, especially climate change and atmospheric deposition of nitrogen (N). We explored the consequences of a temperature-warming trend on stream nitrate in an alpine and subalpine watershed in the Colorado Front Range that has long been the recipient of elevated atmospheric N deposition. Mean annual stream nitrate concentrations since 2000 are higher by 50% than an earlier monitoring period of 1991–1999. Mean annual N export increased by 28% from 2.03 kg N ha⁻¹ yr⁻¹ before 2000 to 2.84 kg N ha⁻¹ yr⁻¹ in Loch Vale watershed since 2000. The substantial increase in N export comes as a surprise, since mean wet atmospheric N deposition from 1991 to 2006 (3.06 kg N ha⁻¹ yr⁻¹) did not increase. There has been a period of below average precipitation from 2000 to 2006 and a steady increase in summer and fall temperatures of 0.12 °C yr⁻¹ in both seasons since 1991. Nitrate concentrations, as well as the weathering products calcium and sulfate, were higher for the period 2000–2006 in rock glacier meltwater at the top of the watershed above the influence of alpine and subalpine vegetation and soils. We conclude the observed recent N increases in Loch Vale are the result of warmer summer and fall mean temperatures that are melting ice in glaciers and rock glaciers. This, in turn, has exposed sediments from which N produced by nitrification can be flushed. We suggest a water quality threshold may have been crossed around 2000. The phenomenon observed in Loch Vale may be indicative of N release from ice features such as rock glaciers worldwide as mountain glaciers retreat.     

Seasonal heterotrophic flagellate and bacterial plankton dynamics in a large oligotrophic lake– Loch Ness, Scotland

1. Bacterial production in the 0–30 m water column of Loch Ness was measured using a dual labelling procedure with [³H] thymidine and [¹⁴C] leucine between May 1993 and June 1994. In most cases the uptake of the two labels did not covary, suggesting unbalanced growth. Rates of bacterial production varied from undetectable to 46.2 μg C l^–1 day^–1. Highest production coincided with the period of highest primary production, but carbon derived from this source was insufficient to meet the bacterial carbon demand, which was met by allochthonous humic inputs to the system.
2. Heterotrophic flagellate (HNAN) grazing rates, measured using fluorescently labelled bacteria, ranged between 10.3 and 24.5 bacteria cell^–1 day^–1 at temperatures between 5 and 15 °C. They removed up to 27% of the bacterial production per day.
3. Heterotrophic flagellate specific growth rates ranged from 0.043 to 0.093 h^–1 between 5 and 15 °C, giving generation times of 7.4–16.1 h.
4. bacterial and HNAN abundances were not coupled, but the highest HNAN grazing impact related to a time of high bacterial productivity.     

The effect of an emergent macrophyte (Typha angustifolia) on sediment resuspension in a shallow north temperate lake

1. The effects of emergent macrophytes on water turbidity and sediment resuspension in the shallow Kirkkojärvi basin of Lake Hiidenvesi were studied with sediment traps, and concomitant sediment and water samples. The study was conducted during May–August in three different zones of a stand of the emergent Typha angustifolia .
2. Within the stand (5 m from the edge), both the concentration of suspended solids and the rate of sediment resuspension were significantly lower than at the edge and outside the stand (5 m from the edge). The differences between the zones increased towards the end of summer together with the growing stem density. During the study period (82 days), 2210 g dw m⁻² of sediment was resuspended in the outer zone. At the edge and in the inner zone, the corresponding numbers were 1414 and 858 g dw m⁻², respectively.
3. With the resuspended sediment, 39.4 mg P  m⁻² day⁻¹ was brought to the water column outside the stand, 22.4 mg P  m⁻² day⁻¹ at the edge and 13.4 mg P  m⁻² day⁻¹ within the stand.
4. In early summer, the concentration of suspended solids had a highly significant positive effect on soluble reactive phosphorus (SRP) concentration in the water, whereas in late summer no effect was found. During the study period, phosphorus retention by emergent macrophyte stands corresponded to 3–5% of the present annual external phosphorus loading of the Kirkkojärvi basin.