Genetic diversity in epichloid endophytes of Hordelymus europaeus suggests repeated host jumps and interspecific hybridizations

Epichloid fungal endophytes (Epichloë and Neotyphodium spp.) are excellent model systems for studying speciation processes because of their variable life history traits that are linked to host grass fitness. Presumed jumps to new hosts and subsequent somatic hybridizations appear to be common among epichloid endophytes resulting in increased genetic variation upon which selection can act and speciation be initiated. In this study, we explored the endophyte diversity of a rare European native woodland grass species, Hordelymus europaeus, along a latitudinal transect covering the entire distribution range of H. europaeus. From 28 populations in six countries, isolates were sampled and molecularly characterized. Based on the sequences of tubB and tefA, six distinct epichloid taxa (interspecific hybrid or cryptic haploid species) were found, of which four were novel and two have been previously reported from this host. Of the novel endophytes, two were presumed to be interspecific hybrids and two of nonhybrid origin. While previously known endophytes of H. europaeus are seed‐born and strictly asexual, one of the novel nonhybrid endophytes found in the glacial refugium of the Apennine peninsula reproduced sexually in cultured plants. This is the first case of a seed‐borne, but sexually reproducing endophyte of this host. We discuss the origin, and possible ancestral species, of the six epichloid taxa using phylogenetic analyses. Repeated host jumps and somatic hybridizations characterize the diversity of the endophytes. To date, no other grass species is known to host a larger diversity of endophytes than H. europaeus.     

Diversity and host recurrence of fungi associated with the bleached leaf litter in a subtropical forest

Fungi that selectively remove lignin cause extensive bleaching of leaf litter, which results in the acceleration of litter decomposition. The taxonomic diversity and host recurrence of saprotrophic fungi associated with bleached leaf litter were investigated in a subtropical forest in southern Japan. A total of 211 fungal isolates and sporocarps were obtained from bleached portions of leaf litter of 33 plant species in 18 families and were classified into 83 operational taxonomic units (OTUs) at the 97% similarity level of the ITS rDNA sequence. These fungal OTUs belonged to Rhytismataceae and Xylariaceae in the Ascomycota, and Marasmiaceae, Mycenaceae, Lachnocladiaceae, and Physalacriaceae in the Basidiomycota. OTUs in Rhytismataceae and Marasmiaceae showed a significantly higher degree of recurrence for plant species than simulated networks where partners were associated randomly. In contrast, OTUs in Xylariaceae and Mycenaceae showed no significant recurrence for plant species. Such differing degrees of recurrence for plant species implied different roles of fungal families in leaf litter decomposition.     

不同产地杜仲树皮可培养内生真菌群落组成和多样性

以湖南、四川、贵州、河南、安徽、江西和陕西7个产地的杜仲Eucommia ulmoides为研究对象,采用可培养法对树皮内生真菌进行分离培养,结合形态学和分子生物学进行鉴定,并分析不同产地杜仲内生真菌群落组成和多样性差异。结果表明,不同产地杜仲树皮中共分离到真菌545株,隶属于7纲、15目、27科、43属,其中间座壳属Diaporthe为7个产地的共有属,各地优势属不同。在属水平上,四川样本中真菌群落多样性最高,河南样本真菌群落多样性最低。Margalef丰富度指数及Pielou均匀度指数表明,在河南样本中的内生真菌分布最均匀,丰富度最低;贵州样本内生真菌丰富度最高,但最不均匀。相似性分析显示不同产地杜仲树皮内生真菌组成和多样性不同。这些结果揭示了杜仲树皮中内生真菌菌群具有丰富的多样性,7个不同产地的杜仲树皮内生真菌群落组成、相对多度及优势类群皆存在差异。     

The chemical composition,antifungal, antioxidant and antimutagenicity properties of bioactive compounds from fungal endophytes associated with Thai orchids

Some plant‐derived bioactive compounds produced by fungal endophytes have been proven to have antimicrobial and antioxidant activities. In this study, endophytic fungi were isolated from 20 orchid samples collected in northern Thailand from 12 genera of orchids. In total, 97 isolates were isolated from the leaves (44.3%), stems (40.2%) and flowers (15.5%) of the orchid samples. The antifungal activity was investigated of the endophytic isolates against the plant pathogenic fungi. The results showed that 13 endophytic isolates provided antifungal activities against Fusarium sp., Colletotrichum sp. and Curvularia sp. The endophyte CK F05‐5, which was isolated from the flower part of Dendrobium lindleyi, was chosen for further testing because it the highest level of antifungal activity against Fusarium sp. The isolate CK F05‐5 was identified as Fusarium oxysporum on the basis of its ITS sequences of 5.8 s rRNA, and phytochemical analysis revealed the presence of coumarins. The ethyl acetate extract of CK F05‐5 was examined for its total phenolic content and antioxidant activity using Folin–Ciocalteu's reagent and 2,2‐diphenyl‐1‐picrylhydrazyl (DPPH) radical scavenging assay, respectively. The phenolic content was 160.51 mg of GAE/g of extract, and the free radical scavenging activity was 89.61 µg/ml at the half maximal inhibitory concentration (IC₅₀). The antimutagenic potential of the ethyl acetate extract of CK F05‐5 against Trp‐P‐1 mutagenic substances was determined using the Ames test which revealed that the extract of CK F05‐5 at 10 mg/plate had the highest antimutagenic activity against Trp‐P‐1 (51.2%) and 39.6% for strains TA98 and TA100, respectively. The active compounds present in the acetate extract of CK F05‐5 were examined using GC‐MS analysis, which displayed the presence of gibepyrone A, pyrrolo [1, 2‐a] pyrazine‐1, 4‐dione, hexahydro‐3‐(2‐methylpropyl) and indoleacetic acid as major components. Based on the results, this endophytic fungus contains various bioactive components that have various biological activities. This useful information could help in producing potentially valuable and novel pharmaceutical products.     

黑果枸杞不同组织内生真菌群落组成及生态功能分析

探究了新疆盐生植物黑果枸杞不同组织中内生真菌群落的组成及多样性,为深入研究盐碱、干旱等环境下内生真菌与宿主的互作机制,筛选和开发促生、防病和抗逆等功能的有益内生真菌资源提供科学依据。利用ITS高通量测序技术比较黑果枸杞不同组织真菌群落组成及差异,并采用FUNGuild数据库预测真菌群落生态功能。测序共获得高质量内生真菌序列354 058条,涉及291个OTUs,分属于9门、19纲、34目、50科、60属。α多样性指数分析表明,根、果中真菌群落多样性和丰富度程度较高,叶居中,花的多样性最低,茎的丰富度最低。对黑果枸杞内生真菌群落组成和优势菌群的分析表明,子囊菌门为优势菌门,花、叶、果、茎和根中相对丰度分别为86.85%、72.36%、75.97%、84.44%和85.02%。链格孢属为黑果枸杞植株中的核心属,不同组织中均有分布,在花、叶、果、茎和根中占比分别为85.41%、69.79%、47.07%、79.94%和36.97%。较优势的菌尚有枝孢属、枝顶孢属、新凸轮孢菌属、茎点霉属和楔孢黑粉菌属等真菌。这些菌多具有促生、抗逆等特性,在宿主对盐碱、干旱等极端环境的适应性方面有着潜在功能。各组织独有属的相对丰度均未超过1%。共有菌和独有菌在不同组织中的组成和相对丰度差异较大。经FUNGuild软件平台解析显示,黑果枸杞中病理-腐生-共生营养型的相对丰度最高,在花、叶、果、茎和根中分别为85.41%、69.84%、47.24%、79.98%和37.09%。果和叶中含多种相对丰度≥1%的条件致病菌,而根中腐生真菌种类较多。黑果枸杞中蕴含着功能丰富的内生真菌菌群,在不同组织中的组成及其生态功能差异较大,同时还含有大量未鉴定出种属和未定义的功能菌群,这些可为黑果枸杞功能菌群发掘提供数据参考。     

寒温带地区典型森林类型中外生菌根真菌多样性和群落组成及其影响因素

外生菌根(ECM)真菌可促进宿主植物对土壤中水分和营养的吸收,提高宿主植物的抗逆性及对环境的适应,在森林生态系统的物质循环中发挥了重要作用。为探明寒温带地区ECM真菌多样性和群落组成以及土壤理化因子对真菌群落组成的可能影响机制,采用高通量测序(Illumina Miseq)平台对大兴安岭4种典型森林类型白桦、樟子松、兴安落叶松和偃松的根围土壤ECM真菌群落组成进行了分析。结果表明,4种典型森林类型根围土壤中共获得167个ECM真菌可操作分类单元(OTUs),隶属于2个门、4个纲、10个目、24个科、36个属。在门水平上,担子菌门(Basidiomycota)真菌的相对丰度占96.4%,子囊菌门(Ascomycota)真菌占3.6%。在属水平上,红菇属(Russula,30.2%)、丝膜菌属(Cortinarius,17.1%)、Piloderma(9.6%)、棉革菌属(Tomentella,7.2%)、丝盖伞属(Inocybe,7.2%)和蜡壳耳属(Sebacina,6.2%)的相对丰度均>5.0%,是该地区的优势ECM真菌类群。不同森林类型的优势ECM真菌在属水平上的组成存在显...     

我国寒温带至亚热带森林多孔菌区系和多样性比较

多孔菌是木材腐朽菌的重要类群, 具有重要的生态功能和经济价值。本文比较分析了我国寒温带至亚热带的阿尔泰山脉、秦岭山脉和南岭山脉的多孔菌物种、生态习性和区系特征。经调查, 在三个山脉共发现多孔菌8目29科107属287种, 其中阿尔泰山、秦岭和南岭分别为84种、132种、160种, 优势科均为多孔菌科和锈革孔菌科。三个山脉的共有属和共有种分别为25个和14个。区系地理分析发现, 阿尔泰山脉和秦岭山脉以世界广布成分和北温带成分为主, 南岭山脉以世界广布和泛热带成分为主。在寄主选择性方面, 阿尔泰山脉的多孔菌偏好生长在裸子植物上, 其比例高于被子植物, 而秦岭和南岭则相反。在腐朽类型方面, 从寒温带至亚热带白腐真菌物种数量呈现逐渐上升的趋势, 而褐腐真菌数量逐渐下降。通过比较分析3个不同气候带的多孔菌物种多样性、寄主偏好性和引起的腐朽类型, 发现气候和植被类型是影响多孔菌区系组成的主要因素。     

A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal

Truffles (Tuber) are ectomycorrhizal fungi characterized by hypogeous fruitbodies. Their biodiversity, host associations and geographical distributions are not well documented. ITS rDNA sequences of Tuber are commonly recovered from molecular surveys of fungal communities, but most remain insufficiently identified making it difficult to determine whether these sequences represent conspecific or novel taxa. In this meta-analysis, over 2000 insufficiently identified Tuber sequences from 76 independent studies were analysed within a phylogenetic framework. Species ranges, host associates, geographical distributions and intra- and interspecific ITS variability were assessed. Over 99% of the insufficiently identified Tuber sequences grouped within clades composed of species with little culinary value (Maculatum, Puberulum and Rufum). Sixty-four novel phylotypes were distinguished including 36 known only from ectomycorrhizae or soil. Most species of Tuber showed 1-3% intraspecific ITS variability and >4% interspecific ITS sequence variation. We found 123 distinct phylotypes based on 96% ITS sequence similarity and estimated that Tuber contains a minimum of 180 species. Based on this meta-analysis, species in Excavatum, Maculatum and Rufum clades exhibit preference for angiosperm hosts, whereas those in the Gibbosum clade are preferential towards gymnosperms. Sixteen Tuber species (>13% of the known diversity) have putatively been introduced to continents or islands outside their native range.     

云南三个地区马铃薯内生真菌多样性研究

为研究云南马铃薯(Solanum tuberosum)内生真菌的多样性,该文以采自云南省德宏芒市、大理喜洲和临沧双江3个地区的马铃薯植株为研究对象,采用组织块分离法、尖端菌丝挑取法对马铃薯根、茎及块茎中的内生真菌进行分离纯化,并采用形态学鉴定方法和ITS序列分析法对分离得到的内生真菌进行鉴定,对内生真菌的定殖率、分离率及多样性指数进行计算和分析。结果表明:(1)共分离得到内生真菌98株,其中从德宏芒市的样品中获得40株,从大理喜洲的样品中获得27株,从临沧双江的样品中获得31株。(2)经鉴定,分离得到的马铃薯内生真菌共涵盖10目10科13属,大多为子囊菌门和担子菌门,优势菌为镰刀菌属(Fusarium)和青霉属(Penicillium),褶皱裸孢壳(Emericella rugulosa)、接骨木镰刀菌(Fusarium sambucinum)、毛韧革菌(Stereum hirsutum)、Psathyrella sulcatotuberculosa和Epicoccum catenisporum 5种真菌均为首次从马铃薯植株中分离得到。(3)马铃薯块茎内生真菌的定殖率最高,根部内生真菌定殖率最低;内生真菌的分离率以马铃薯根部为最高,而茎部最低;不同组织中内生真菌的多样性指数趋势均为根>块茎>茎。从综合来看,云南马铃薯植株中的内生真菌具有较高的多样性,不同地区的马铃薯样品中内生真菌优势菌不同,马铃薯根部具有最丰富的内生真菌种群和最高的分离率,是最适合进行内生真菌分离的材料。该研究结果为后期探究马铃薯内生真菌对病原菌的拮抗作用奠定了基础,也为马铃薯内生真菌多样性研究提供了参考数据。     

Seasonal changes in photosynthetic characteristics of Pachysandra terminalis (Buxaceae), an evergreen woodland chamaephyte,in the cool temperate regions of Japan

Summary Seasonal changes in photosynthetic capacity, and photosynthetic responses to intercellular CO₂ concentration and irradiance were investigated under laboratory conditions on intact leaves of Pachysandra terminalis. Photosynthetic capacity and stomatal conductance under saturating light intensity and constant water vapor pressure deficit showed almost the same seasonal trend. They increased from early June just after the expansion of leaves, reached the maximum in late-Septemer, and then decreased to winter. In over-wintering leaves they recovered and increased immediately after snow-melting, reached a first maximum in late April, and then decreased to early July in response to the reduction of light intensity on the forest floor. There-after, they increased from mid August, reached a second maximum in late September, and then decreased to winter. The parallel changes of photosynthesis and stomatal conductane indicate a more or less constant intercellular CO₂ concentration throughout the year. The calculated values of relative stomatal limitation of photosynthesis were nearly constant throughout the year, irrespective of leaf age. The results indicate that the seasonal changes in light-saturated photosynthetic capacity are not due to a change of stomatal conductance, but to a change in the photosynthetic capacity of mesophyll. Indeed, carboxylation efficiency assessed by the inital slope of the Ci-photosynthesis curve changed in proportion to seasonal changes of the photosynthetic capacity in both current-year and over-wintered leaves. High photosynthetic capacity in current-year leaves as compared with one-year-old leaves was also due to the high photosynthetic capacity of mesophyll. Nevertheless, stomatal conductance changed in proportion to photosynthetic capacity, indicating that stomatal conductance is regulated by the mesophyll photosynthetic capacity such that the intercellular CO₂ concentrations are maintained constant. The quantum yield also changed seasonally parallel with that in the photosynthetic capacity.Contribution No. 2893 from the Institute of Low Temperature Science     

High diversity of endophytic fungi from the pharmaceutical plant, Heterosmilax japonica Kunth revealed by cultivation-independent approach

Heterosmilax japonica Kunth is well recognized for its diuretic effects in China. However, little is known about its endophytic fungi. In this study, microbial communities inhabiting the stems of H. japonica in spring and summer were investigated by light microscopy and cultivation-independent approaches, such as RFLP analysis and sequencing of rDNA ITS library. Molecular phylogenetic analysis showed that a broad spectrum of fungi, including Mycosphaerella, Phomopsis, Aureobasidium, Cladosporium, Glomerella, Botryosphaeria, Guignardia, is able to colonize the plants internally. Particularly, several rDNA sequences determined in this study like YJ4-61 are not specifically affiliated with any currently documented fungal sequences in the public database. Several sequence types, such as YJ4-9 and YJ4-70, are significantly similar to some uncultured environmental samples. Furthermore, our result also showed that the samples collected in spring harbored more abundant endophytic populations than that in summer, implying a seasonal fluctuation for the endophytes in H. japonica.     

Characterization of bacterial diversity in pulque, a traditional Mexican alcoholic fermented beverage, as determined by 16S rDNA analysis

The bacterial diversity in pulque, a traditional Mexican alcoholic fermented beverage, was studied in 16S rDNA clone libraries from three pulque samples. Sequenced clones identified as Lactobacillus acidophilus, Lactobacillus strain ASF360, L. kefir, L. acetotolerans, L. hilgardii, L. plantarum, Leuconostoc pseudomesenteroides, Microbacterium arborescens, Flavobacterium johnsoniae, Acetobacter pomorium, Gluconobacter oxydans, and Hafnia alvei, were detected for the first time in pulque. Identity of 16S rDNA sequenced clones showed that bacterial diversity present among pulque samples is dominated by Lactobacillus species (80.97%). Seventy-eight clones exhibited less than 95% of relatedness to NCBI database sequences, which may indicate the presence of new species in pulque samples.     

Cultivable bacterial composition and BIOLOG catabolic diversity of biofilm communities developed on Phragmites australis

Biofilm samples formed on submerged young and old stems of reed, Phragmites australis (Cav.) Trin ex Steudel were taken during summer at different sites of Lake Velencei, Hungary. BIOLOG GN microplates were used to analyze the patterns of sole carbon source utilizations by microbial communities. From the carbon sources, carbohydrates and amino acids were preferred by all microbial communities. In the case of the old reed stem samples, higher number of carbohydrates, carboxylic acids and polymers were used than in young samples. Biofilm bacterial communities from the old reed samples of the nature conservation area of the lake used the highest number of (≥50% of the available) substrates. In principal component analysis (PCA), the metabolic potential of the microbial communities from the middle open water region of the lake showed the smallest variability. The variability within metabolic potential of the reed stem microbial communities from a given sampling site was the largest in the case of samples originating from the western, reed-covered nature conservation area. A total of 251 bacterial isolates obtained after serial dilutions and plating onto different media were characterized by traditional phenotypic tests. The strains showed high activities mainly in the hydrolysis of certain biopolymers (gelatine and casein). PCA was used to evaluate the phenotypic variability of strain groups of different sampling sites. The two open water regions were similar to each other, and separated from the western reed covered part of the lake. Similarly to the BIOLOG community-level physiological profiles, strain groups of the young and old reed stem samples originating from the nature conservation area had the largest metabolic potential. On the basis of 16S rDNA sequence analysis, 23 representative strains with different ARDRA patterns were identified. The cultivation-based investigations of bacterial diversity showed characteristic differences in the number of identified taxa in connection with the sampling sites. No characteristic differences could be observed according to medium or sample type (young, first year and more than 1-year old stems) among the identified species. 16S rDNA sequence comparisons resulted in the identification of the genera Aureobacterium, Arthrobacter, Kocuria, Microbacterium, Micrococcus, Rhodococcus, Bacillus, Marinibacillus, Rhodobacter, Defluvibacter, Pseudomonas, Klebsiella, Serratia and Aeromonas. The results of the cultivation-based and BIOLOG investigations revealed characteristic differences in the bacterial community composition and activities of the open water region and the reed covered nature conservation part of the lake.     

海南热带雨林腐木上酵母菌物种多样性研究

用含木糖为唯一碳源(培养基X)和含葡萄糖及7.6%乙醇(培养基E)的两种富集培养基分别从采自海南热带雨林的56和57份腐木样品中分离到酵母菌67和75株.依据26S rDNA D1/D2区域序列分析并结合形态学特征对这些菌株进行了分类学研究,探讨了该地区腐木上的酵母菌物种多样性及其分布.从分离的142株酵母菌中鉴定出14个属63个种,其中疑似新种25个,占总种数的近40%,说明在热带雨林腐木中尚存在大量酵母菌新分类群有待被发现.从用培养基X和E分离的酵母菌中分别鉴定出7属37种和11属33种,优势属均为假丝酵母属Candida Berkhout和毕赤酵母属Pichia Hansen,但种类组成基本不同.用培养基x富集分离的菌株以Candida quercitrusa S.A.Meyer＆Phaff的地理分布最广,用培养基E富集分离的菌株以异常毕赤酵母Pichia anomala(Hansen)Kurtzman、酿酒酵母Saccharomyces cerevisiae Meyen ex Hansen和亚膜毕赤酵母Pichiasubpelliculosa Kurtzman分布最广泛.同一样品用两种不同富集培养基分离的菌株大多数属于不同的种,在对比的23份样品中,只从2份样品中分离到了同一个种的菌株.用培养基X和E分离的菌株分别属于可利用木糖和可耐受乙醇的酵母菌,用两种培养基同时分离到的菌株属于具备利用木糖和耐受高浓度乙醇两种能力的菌株.这些酵母菌在木质纤维素物质的生物乙醇转化技术中的应用价值值得进一步研究.     

天目山山胡椒不同部位内生真菌组成及多样性分析

采用表面消毒法,从浙江天目山野生山胡椒[ Lindera glauca( Sieb.et Zucc.) Blume]的茎、叶和树皮中分离出内生真菌,基于ITS序列分析进行分类鉴定;并以内生真菌的分离率、定殖率、分离频率、多样性指数(H')及相似性系数为指标,分析了山胡椒内生真菌的菌群组成及多样性.结果显示:在26株山胡椒样株的728块组织块中共分离得到328株内生真菌(茎、叶和树皮中分别有161、40和127株);共鉴定出44个分类单元(茎、叶和树皮中各有19、18和28个),其中25个分类单元鉴定到种、17个鉴定到属、2个鉴定到科,ITS序列的GenBank登录号从JF502420至JF502462.在44个分类单元中,有40个分类单元属于子囊菌(310株),存在于山胡椒的各个部位;仅有4个分类单元属于担子菌(18株),且仅存在于茎和树皮中.山胡椒茎、树皮和叶中内生真菌的定殖率分别为65％、60％和15％,分离率分别为0.77、0.61和0.19;叶和树皮中内生真菌的多样性指数均为2.63,远大于茎(H’=1.83).山胡椒内生真菌的优势属为Phomopsis、Paraconiothyrium、Phoma和Colletotrichum,大量存在于叶、茎和树皮中.山胡椒茎与树皮、茎与叶及叶与树皮间内生真菌的相似性系数分别为0.27、0.19和0.18,显示树皮和叶之间以及树皮和茎之间内生真菌的组成极不相似.研究结果表明:山胡椒体内存在大量的内生真菌,其茎、叶和树皮的内生真菌菌群组成具有一定程度的多样性和差异性,且内生真菌的分布具有组织特异性.     

Spatial structure and diversity of woody plants and ectomycorrhizal fungus sporocarps in a natural subtropical forest

Spatial patterns of ectomycorrhizal fungi, ectomycorrhizal plants, and non-ectomycorrhizal plants were investigated in a natural subtropical forest using second-order analysis. The results of spatial pattern analysis showed that the degree of clumping of woody plants and ectomycorrhizal sporocarps were correlated. There was a significantly positive correlation of relative aggregation indices between ectomycorrhizal fungi and both non-ectomycorrhizal trees and ectomycorrhizal saplings. Correlations between percentage of ectomycorrhizal trees and sporocarp occurrence of ectomycorrhizal fungi and between diversities of woody plants and ectomycorrhizal fungi were distance-dependent or scale-related. A significantly high percentage of ectomycorrhizal trees was found only at relatively short distance from ectomycorrhizal fungal sporocarps, and significantly positive correlation of the diversity between woody plants and ectomycorrhizal fungi was found only at relative long distance, which implied that ectomycorrhizal sporocarps prefer ectomycorrhizal-tree-dominant micro-sites at near distances and at relatively large scales, diverse ectomycorrhizal sporocarps could be found in woodlands with high diversity of woody plants. Important factors affecting the spatial distribution, occurrence, and diversity of ectomycorrhizal fungi include spatial pattern of ectomycorrhizal plants and non-ectomycorrhizal plants, percentage of ectomycorrhizal plants, and plant diversity in a natural forest.     

海南岛不同林龄短枝木麻黄凋落物内外真菌多样性分析

以海南海口桂林洋滨海立地上幼龄林、中龄林和成熟林短枝木麻黄为研究对象,采集凋落物和林地土壤样品,利用IlluminaMiseq PE300测序平台对凋落物内外真菌ITS rDNA进行高通量测序,分析了凋落物内外真菌群落多样性及其与凋落物和林地土壤理化性质的关系。结果表明：（1）所有样品获得669476条有效序列,隶属6门23纲59目119科212属314种。3林龄木麻黄凋落物外生真菌多样性和丰富度高于内生真菌。（2）内外真菌群落结构有较大共性,子囊菌门和担子菌门为优势门,煤炱目、炭角菌目和木耳目为内外真菌共同优势目。Coniochaetales、Magnaporthales等4个目仅在凋落物内部分布,而蛙粪霉目、丝孢酵母目为外生真菌特有菌群。（3）木麻黄凋落物pH值和有机碳显著影响着凋落物内生真菌群落结构,而土壤容重和铵态氮显著影响着外生真菌群落结构。研究结果为探讨微生物在木麻黄凋落物降解过程中作用的研究奠定基础。     

昆明西山森林公园天然虫生真菌及其内生真菌的分离鉴定及多样性分析

【背景】不同地区虫草物种多样性的调查是虫草相关研究的热点之一,虫草真菌区系研究是真菌资源研究的重要内容。【目的】了解云南省昆明市西山森林公园天然虫生真菌及其内生真菌的多样性,增加对虫草真菌区系的认识。【方法】对该地区通过资源调查并采用组织分离法对采集的虫草样本进行虫生真菌及其内生真菌的分离,利用形态特征观察及ITS联合nr SSU、nr LSU、translation elongation factor-1α (tef-1α)、rpb1、rpb2多基因测序进行虫生真菌物种鉴定及多样性分析。【结果】共采集45份云南省昆明市西山森林公园天然虫草样本,鉴定结果表明隶属于2科5属12种,包括虫草科(Cordycipitaceae)的鳞翅虫草属(Samsoniella)(2种,含疑似新种1个)、虫草属(Cordyceps)(4种)和白僵菌属(Beauveria)(4种),以及线虫草科(Ophiocordycipitaceae)的紫枝孢属(Purpureocillium)(1种)和弯颈霉属(Tolypocladium)(1种,为疑似新种),优势属为虫草属(Cordyceps),优势种为环链虫草(C...