The role of edges in the selection of a jump target in Mantis religiosa

Before jumping to a landing object, praying mantids determine the distance, using information obtained from retinal image motion resulting from horizontal peering movements. The present study investigates the peering-jump behaviour of Mantis religiosa larvae with regard to jump targets differing in shape and size. The experimental animals were presented with square, triangular and round target objects with visual extensions of 20 degrees and 40 degrees. The cardboard objects, presented against a uniform white background, were solid black or shaded with a gradation from white to black. It was found that larger objects were preferred to smaller ones as jump targets, and that the square and triangle were preferred to the round disk. When two objects were presented, no preference was exhibited between square and triangular objects. However, when three objects were presented, the square was preferred. For targets with a visual angle of 40 degrees, the amplitude and velocity of the horizontal peering movements were greater for the round disk than for the square or triangle. This amplification of the peering movements suggests that weaker motion signals are generated in the case of curved edges. This may help to account for the preference for the square and triangle as jump targets.     

A distance geometry program for determining the structures of small proteins and other macromolecules from nuclear magnetic resonance measurements of intramolecular1H−1H proximities in solution

DISGEO is a new implementation of a distance geometry algorithm which has been specialized for the calculation of macromolecular conformation from distance measurements obtained by two-dimensional nuclear Overhauser enhancement spectroscopy. The improvements include (1) a decomposition of the complete embedding process into two successive, more tractable calculations by the use of “substructures”, (2) a compact data structure for storing incomplete distance information on a structure, (3) a more efficient shortest-path algorithm for computing the triangle inequality limits on all distances from this information, (4) a new algorithm for selecting random metric spaces from within these limits, (5) the use of chirality constraints to obtain good covalent geometry without the use ofad hoc weights or excessive optimization. The utility of the resultant program with nuclear magnetic resonance data is demonstrated by embedding complete spatial structures for the protein basic pancreatic trypsin inhibitor vs all 508 intramolecular, interresidue proton-proton contacts shorter than 4.0 Å that were present in its crystal structure. The crystal structure could be reproduced from this data set to within 1.3 Å minimum root mean square coordinate difference between the backbone atoms. We conclude that the information potentially available from nuclear magnetic resonance experiments in solution is sufficient to define the spatial structure of small proteins.     

Prototype identification and categorization of incomplete figures by pigeons

Previous research has shown that pigeons, unlike humans, cannot identify prototypes after training with corrupted exemplars. In the present experiment, pigeons were initially trained to discriminate between examples of a degraded square and a degraded triangle. The pigeons then received a transfer test in extinction comprised of novel examples of the degraded square and triangle, and the prototype square and triangle. The pigeons successfully categorized both the novel examples of the degraded figures and the underlying prototypes. These results suggest that aspects of categorization and prototype identification may be shared across species.     

A visually evoked escape response of the housefly

Summary Flies (Musca domestica) avoid danger by initiating a rapid jump followed by flight. To identify the visual cues that trigger the escape response in the housefly, we measured the timing and probability of escapes when the fly was presented with a variety of visual stimuli created by moving targets toward it. Our results show that an escape response is triggered by an approaching dark disk, but not by a receding dark disk. On the other hand, a bright disk elicits escape only when it recedes. A disk with black and white rings is less effective at eliciting escape than is a dark solid disk of the same size. This indicates that the darkening contrast produced by an approaching stimulus is a more crucial parameter than expansion cues contained in the optical flow. Escape is also triggered by a horizontally moving dark edge, but not by a moving bright edge or by a grating. An examination of several visual parameters reveals that the darkening contrast, measured from the onset of stimulation to the start of escape is nearly constant for a variety of stimuli that trigger escape reliably. Thus darkening contrast, coupled with motion may be crucial in eliciting the visually evoked escape response. Other visual parameters such as time-to-contact or target angular velocity seem to be relatively unimportant to the timing of escapes.Abbreviations P _s Probability of successful escape - r _disk radius of disk target - r _arena radius of shielding arena - v _disk linear velocity of disk target - v _edge linear velocity of edge - d _disk angular velocity of disk target boundary - _edge angular velocity of edge - _escape target distance at escape - d _start target distance before onset of target movement - h _edge height of the edge above fly - x _start distance from corner of triangle to start position of edge (0 or 50 mm) - x _escape distance from corner of triangle to the position of the edge when the fly escapes - x _center distance from corner of triangle to point above the center of the pad - x _total distance from the corner of the triangle to the base (height of triangle = base of triangle)     

Change with age in regression construction of fat percentage for BMI in school-age children

In this study, curvilinear regression was applied to the relationship between BMI and body fat percentage, and an analysis was done to see whether there are characteristic changes in that curvilinear regression from elementary to middle school. Then, by simultaneously investigating the changes with age in BMI and body fat percentage, the essential differences in BMI and body fat percentage were demonstrated. The subjects were 789 boys and girls (469 boys, 320 girls) aged 7.5 to 14.5 years from all parts of Japan who participated in regular sports activities. Body weight, total body water (TBW), soft lean mass (SLM), body fat percentage, and fat mass were measured with a body composition analyzer (Tanita BC-521 Inner Scan), using segmental bioelectrical impedance analysis & multi-frequency bioelectrical impedance analysis. Height was measured with a digital height measurer. Body mass index (BMI) was calculated as body weight (km) divided by the square of height (m). The results for the validity of regression polynomials of body fat percentage against BMI showed that, for both boys and girls, first-order polynomials were valid in all school years. With regard to changes with age in BMI and body fat percentage, the results showed a temporary drop at 9 years in the aging distance curve in boys, followed by an increasing trend. Peaks were seen in the velocity curve at 9.7 and 11.9 years, but the MPV was presumed to be at 11.9 years. Among girls, a decreasing trend was seen in the aging distance curve, which was opposite to the changes in the aging distance curve for body fat percentage.     

Factors Limiting the Number of Radiation-Induced Chromosome Exchanges : I. Distance: Evidence from Non-Interaction of x-Ray— and Neutron-Induced Breaks

Soaked seeds of Vicia faba were exposed to fractionated doses of x-rays or x-rays and fast neutrons. When the two-hit (exchange) chromosome aberrations were scored at the first mitosis of the root tip, it was observed that with short fractionation times the radiation-induced breaks from the two x-ray doses could rejoin with one another to form exchanges in proportion to the square of the total dose. If, however, one dose was x-rays and the second neutrons, then no quantitatively determinable interaction occurred between the breaks induced by each of the doses, and the aberration yield was simply the sum of that induced by each fraction. The phenomenon of non-interaction as observed by these dose fractionation studies and also by the linear dose response curve for two-break aberrations induced by neutrons has led to calculations of the distance over which two breaks can rejoin. The distance is evidently much smaller than the previously accepted value of 1 µ.     

High-frequency chest compression: effect of the third generation compression waveform

High-frequency chest compression (HFCC) therapy has become the prevailing form of airway clearance for patients with cystic fibrosis (CF) in the United States. The original square waveform was replaced in 1995 with a sine waveform without published evidence of an equality of effectiveness. The recent development of a triangle waveform for HFCC provided the opportunity to compare the functional and therapeutic effects of different waveforms. Clinical testing was done in patients at home with therapy times recorded with all sputum collected in preweighed sealable vials. The eight study patients with CF were regular users of a sine waveform device. They produced sputum consistently and were clinically stable. They used their optimum frequencies for therapy for each waveform and, for one week for each waveform, collected all sputum during their twice-daily timed HFCC therapies. After collection, these vials were reweighed, desiccated, and reweighed to calculate wet and dry weights of sputum per minute of therapy time. Frequency associated vest pressures transmitted to the mouth, and induced airflows at the mouth were measured in healthy volunteers. The pressure waveforms produced in the vest were, in shape, faithfully demonstrable at the mouth. In the healthy subject the transmission occurred in 2 ms and was attenuated to about 75% of the vest pressure for the triangle waveform and 60% for the sine waveform. All patients produced more sputum with the triangle waveform than with the sine waveform. The mean increase was 20%+ range of 4% to 41%. P value was <.001. Future studies of HFCC should investigate the other effects of the sine and triangle waveforms, as well as the neglected square waveform, on mucus clearance and determine the best frequencies for each waveform, disease, and patient.     

12种鹅绒藤属（萝藦科）植物花粉器形态学研究

用光学显微镜对萝藦科（Asclepiadaceae）鹅绒藤属（Cynanchum）12种植物花粉器形态进行了观察。结果表明：花粉块的形态有3种类型：球形、长球形和超长球形。着粉腺的形态有6种类型：长圆形、方形、近方形、三角形、正三角形和近三角形。花粉器形态学结果对青羊参（Cynanchum otophyllum）在鹅绒藤属中的分类具有较大意义;支持《中国植物志》第63卷中对催吐白前组（Sect. Vincetoxicum）的分组处理;结合鹅绒藤属花粉块下垂,娃儿藤属（Tylophora）花粉块平展的特点,支持将娃儿藤属作为一个独特类群的观点。     

Euclidean nature of phylogenetic distance matrices

Phylogenies are fundamental to comparative biology as they help to identify independent events on which statistical tests rely. Two groups of phylogenetic comparative methods (PCMs) can be distinguished: those that take phylogenies into account by introducing explicit models of evolution and those that only consider phylogenies as a statistical constraint and aim at partitioning trait values into a phylogenetic component (phylogenetic inertia) and one or multiple specific components related to adaptive evolution. The way phylogenetic information is incorporated into the PCMs depends on the method used. For the first group of methods, phylogenies are converted into variance-covariance matrices of traits following a given model of evolution such as Brownian motion (BM). For the second group of methods, phylogenies are converted into distance matrices that are subsequently transformed into Euclidean distances to perform principal coordinate analyses. Here, we show that simply taking the elementwise square root of a distance matrix extracted from a phylogenetic tree ensures having a Euclidean distance matrix. This is true for any type of distances between species (patristic or nodal) and also for trees harboring multifurcating nodes. Moreover, we illustrate that this simple transformation using the square root imposes less geometric distortion than more complex transformations classically used in the literature such as the Cailliez method. Given the Euclidean nature of the elementwise square root of phylogenetic distance matrices, the positive semidefinitiveness of the phylogenetic variance-covariance matrix of a trait following a BM model, or related models of trait evolution, can be established. In that way, we build a bridge between the two groups of statistical methods widely used in comparative analysis. These results should be of great interest for ecologists and evolutionary biologists performing statistical analyses incorporating phylogenies.     

黄河三角洲东方白鹳繁殖期觅食栖息地的利用

2008和2009年3—6月,在黄河三角洲自然保护区采用定点观察、GPS定位、样方调查和逐步判别分析等方法对东方白鹳(Ciconia boyciana)繁殖期觅食地的利用进行了研究。共测定了75个觅食利用样方和74个对照样方的14个生态因子。结果表明,东方白鹳繁殖期倾向于在明水面、芦苇沼泽和滩地中觅食,对草地和农田利用极少。偏向于食物丰富度较高的觅食点;对隐蔽级高低没有明显的偏好。对利用样方和对照样方进行比较,发现利用样方具有植被高度和植被盖度较低,觅食地水深相对较浅,距明水面、芦苇沼泽、树林等距离较近,距重度干扰源较远等特征。逐步判别分析表明,距芦苇沼泽距离、样方内水深、距重度干扰源距离、食物丰富度和明水面距离具有重要作用,由这5个变量构成的方程在对繁殖季节东方白鹳觅食地利用样方和对照样方进行区分时,正确判别率可以达到95.5%。东方白鹳繁殖期觅食地的利用主要与水源、人为干扰和食物条件有关。     

Factors limiting the number of radiation-induced chromosome exchanges. I. Distance: evidence from non-interaction of x-ray- and neutron-induced breaks

Soaked seeds of Vicia faba were exposed to fractionated doses of x-rays or x-rays and fast neutrons. When the two-hit (exchange) chromosome aberrations were scored at the first mitosis of the root tip, it was observed that with short fractionation times the radiation-induced breaks from the two x-ray doses could rejoin with one another to form exchanges in proportion to the square of the total dose. If, however, one dose was x-rays and the second neutrons, then no quantitatively determinable interaction occurred between the breaks induced by each of the doses, and the aberration yield was simply the sum of that induced by each fraction. The phenomenon of non-interaction as observed by these dose fractionation studies and also by the linear dose response curve for two-break aberrations induced by neutrons has led to calculations of the distance over which two breaks can rejoin. The distance is evidently much smaller than the previously accepted value of 1 micro.     

Accounting for radiotelemetry signal flux in triangulation point estimation

Triangulation by radiotelemetry is a method commonly used to estimate locations of wildlife. Despite the importance of the accuracy of resulting location estimates, there has been little development and comparison of alternative methods for point-location estimation for 25 years. Most methods assume that signal transmissions as they are received are consistent, but signal heterogeneity and fluxing is common. Using data from a beacon study, we determined that a subjective ranking of confidence in the accuracy of a signal was correlated with absolute bearing error. Using this factor and the distance from a telemetry station to the error triangle incenter, we developed an algorithm to place a weighted point-location estimate in relative proximity to each error triangle leg. We have termed this the weighted-incenter method. Despite previous findings that the major confidence ellipse axis of Lenth’s maximum likelihood estimator (MLE) correlated best to linear distance error, our beacon test data indicated that total bearing angle difference was the best single predictor of linear error with an optimal total angle of about 100°. The new and intuitive weighted-incenter method offered some improvement over previous methods such as the MLE estimator, but only with suboptimal angle bearings that may be common in field studies. By using a MATLAB function to produce data for site-specific regression analyses, one can determine which method should produce the more accurate point-location estimate for each triangulation observation. Further significance of this study for field biologists is discussed.     

Photosynthetic Capacity and Carbon Contribution of Leaves and Bracts to Developing Floral Buds in Cotton

During ontogeny of Gossypium hirsutum L. floral buds (squares), increases in area and dry mass (DM) of floral bracts and the subtending sympodial leaf followed a sigmoid growth curve with increasing square age. The maximum growth rates of the bract area and bract DM occurred between 15 and 20 d after square first appearance (3 mm in diameter). Net photosynthetic rate (P_N) of the sympodial leaf at first fruiting branch position of main-stem node 10 reached a maximum when the subtended square developed into a white flower. Floral bracts had much lower P_N and higher dark respiration than the subtending leaf. The amount of ¹⁴CO₂ fixation by the bracts of a 20-d-old square was only 22 % of the subtending leaf, but 56 % of ¹⁴C-assimilate in the floral bud was accumulated from the bracts, 27 % from the subtending leaf, and only 17 % from the main-stem leaf at 6 h after ¹⁴C feeding these source s. Hence floral bracts play an important role in the carbon supply of developing cotton squares. This revised version was published online in September 2006 with corrections to the Cover Date.     

Invasion triangle: an organizational framework for species invasion

Species invasion is a complex, multifactor process. To encapsulate this complexity into an intuitively appealing, simple, and straightforward manner, we present an organizational framework in the form of an invasion triangle. The invasion triangle is an adaptation of the disease triangle used by plant pathologists to help envision and evaluate interactions among a host, a pathogen, and an environment. Our modification of this framework for invasive species incorporates the major processes that result in invasion as the three sides of the triangle: (1) attributes of the potential invader; (2) biotic characteristics of a potentially invaded site; and (3) environmental conditions of the site. The invasion triangle also includes the impact of external influences on each side of the triangle, such as climate and land use change. This paper introduces the invasion triangle, discusses how accepted invasion hypotheses are integrated in this framework, describes how the invasion triangle can be used to focus research and management, and provides examples of application. The framework provided by the invasion triangle is easy to use by both researchers and managers and also applicable at any level of data intensity, from expert opinion to highly controlled experiments. The organizational framework provided by the invasion triangle is beneficial for understanding and predicting why species are invasive in specific environments, for identifying knowledge gaps, for facilitating communication, and for directing management in regard to invasive species.     

二齿新蚤和方形黄鼠蚤松江亚种侵袭与离开宿主习性的实验研究

本文对二齿新蚤和方形黄鼠蚤松江亚种侵袭与离开宿主的习性进行了实验研究,结果：(1)蚤攻击宿主距离平均在2cm以内,最大攻击距离不超过10cm。在有效侵袭范围内,蚤与宿主距离近时较距离远时吸血蚤数增多。(2)蚤对宿主的侵袭程度雌蚤大于雄蚤,繁殖蚤大于新羽化蚤,二齿新蚤大于方形黄鼠蚤松江亚种,对小白鼠大于对达乌尔黄鼠。(3)宿主死后一定时间内,仍有部份蚤侵袭其尸体。 死亡时间越长侵袭蚤数越少,呈logY=a-blogX型曲线。(4)蚤离开宿主时间呈偏态分布,温度越高偏态分布越明显。蚤离开死鼠和离开活鼠所需时间很接近。 二齿新蚤和方形黄鼠蚤松江亚种离开宿主时间几乎相同。二种蚤离开宿主平均时间与环境温度呈负相关,且呈曲线关系。     

RF tumor ablation with internally cooled electrodes and saline infusion: what is the optimal location of the saline infusion?

Background

Radiofrequency ablation (RFA) of tumors by means of internally cooled electrodes (ICE) combined with interstitial infusion of saline may improve clinical results. To date, infusion has been conducted through outlets placed on the surface of the cooled electrode. However, the effect of infusion at a distance from the electrode surface is unknown. Our aim was to assess the effect of perfusion distance (PD) on the coagulation geometry and deposited power during RFA using ICE.

Methods

Experiments were performed on excised bovine livers. Perfusion distance (PD) was defined as the shortest distance between the infusion outlet and the surface of the ICE. We considered three values of PD: 0, 2 and 4 mm. Two sets of experiments were considered: 1) 15 ablations of 10 minutes (n ≥ 4 for each PD), in order to evaluate the effect of PD on volume and diameters of coagulation; and 2) 20 additional ablations of 20 minutes. The effect of PD on deposited power and relative frequency of uncontrolled impedance rises (roll-off) was evaluated using the results from the two sets of experiments (n ≥ 7 for each PD). Comparisons between PD were performed by analysis of variance or Kruskal-Wallis test. Additionally, non-linear regression models were performed to elucidate the best PD in terms of coagulation volume and diameter, and the occurrence of uncontrolled impedance rises.

Results

The best-fit least square functions were always obtained with quadratic curves where volume and diameters of coagulation were maximum for a PD of 2 mm. A thirty per cent increase in volume coagulation was observed for this PD value compared to other values (P < 0.05). Likewise, the short coagulation diameter was nearly twenty five per cent larger for a 2 mm PD than for 0 mm. Regarding deposited power, the best-fit least square function was obtained by a quadratic curve with a 2 mm PD peak. This matched well with the higher relative frequency of uncontrolled impedance rises for PD of 0 and 4 mm.

Conclusion

Saline perfusion at around 2 mm from the electrode surface while using an ICE in RFA improves deposition of energy and enlarges coagulation volume.     

Seed dispersal of the non-native invasive tree <Emphasis Type="Italic">Ailanthus altissima</Emphasis> into contrasting environments

Ailanthus altissima has a long history of invasion in urban areas and is currently spreading into suburban and rural areas in the eastern U.S. The objectives of our study were to (1) determine whether A. altissima seed dispersal distance differed between populations on the edges of open fields and intact deciduous forest, and (2) determine whether dispersal differed for north and south winds. We also assessed the relationship between seed characteristics and distance from source populations in fields and forests, and whether seeds disperse at different rates throughout the dispersal season. Using two fields, two intact forest stands, and one partially harvested stand, we sampled the seed rain at 10 m intervals 100 m into each site from October to April 2002–2003. We compared seed density in field and intact forests using a three-way ANOVA with distance from source, wind direction, and environmental structure as independent variables. To assess the accuracy of common empirical dispersal models, mean seed density data at each site were fitted with alternative regression models. We found that mean seed dispersal distance depended on environmental structure and wind direction, a result driven in large part by dispersal at a single site where seed density did not decline with distance. The two alternative regression models fit each site’s dispersal curve equally well. More seeds were dispersed early than in mid- or late-season. Large, heavy seeds traveled as far as small light seeds. Turbulent winds appear to be necessary for seed release, as indicated by a wind tunnel experiment. A. altissima is able to disperse long distances into fields and into mature forests, and can reach canopy gaps and other suitable habitats at least 100 m from the forest edge. It is an effective disperser and can spread rapidly in fragmented landscapes where edges and other high light environments occur. These conditions are increasingly common throughout the eastern U.S. and in other temperate regions worldwide.     

娃儿藤属(萝藦科)植物花粉器形态

用光镜对我国萝藦科(Asclepiadaceae)娃儿藤属(Tylophora)17种植物的花粉器形态进行了观察。结果表明,着粉腺的形态有4种类型:长圆形、近方形、三角形和倒立三角形。花粉块的形态有3种类型:球形、长球形和超长球形。花粉块柄的长度、着粉腺和花粉块的形态和大小在种间存在较显著的差异,可作为区分种的辅助特征,对娃儿藤属植物的分类有较大意义。     

The Mass-Longevity Triangle: Pareto Optimality and the Geometry of Life-History Trait Space

When organisms need to perform multiple tasks they face a fundamental tradeoff: no phenotype can be optimal at all tasks. This situation was recently analyzed using Pareto optimality, showing that tradeoffs between tasks lead to phenotypes distributed on low dimensional polygons in trait space. The vertices of these polygons are archetypes—phenotypes optimal at a single task. This theory was applied to examples from animal morphology and gene expression. Here we ask whether Pareto optimality theory can apply to life history traits, which include longevity, fecundity and mass. To comprehensively explore the geometry of life history trait space, we analyze a dataset of life history traits of 2105 endothermic species. We find that, to a first approximation, life history traits fall on a triangle in log-mass log-longevity space. The vertices of the triangle suggest three archetypal strategies, exemplified by bats, shrews and whales, with specialists near the vertices and generalists in the middle of the triangle. To a second approximation, the data lies in a tetrahedron, whose extra vertex above the mass-longevity triangle suggests a fourth strategy related to carnivory. Each animal species can thus be placed in a coordinate system according to its distance from the archetypes, which may be useful for genome-scale comparative studies of mammalian aging and other biological aspects. We further demonstrate that Pareto optimality can explain a range of previous studies which found animal and plant phenotypes which lie in triangles in trait space. This study demonstrates the applicability of multi-objective optimization principles to understand life history traits and to infer archetypal strategies that suggest why some mammalian species live much longer than others of similar mass.     

Edge effects on epiphytic communities in a Mediterranean Quercus pyrenaica forest

Question: What are the edge effect responses of epiphytic lichen communities in Mediterranean Quercus pyrenaica forest? Location: Central Spain. Methods: We established ten transects perpendicular to a road dissecting a well conserved remnant of Q. pyrenaica forest into two sections. Transects extended from the forest/road edge to 100 m into the forest. Data were collected from seven plots in each transect at different distances from the edge. Variables were grouped into stand scale variables (distance to edge, number of trees per plot, mean diameter per plot, irradiance) and tree scale variables (diameter and height of sampled trees, aspect of the sampled square and relative height of the square). We used General Mixed Linear Models and constrained ordination techniques to test the hypothesis that the spatio‐temporal heterogeneity of light and water controls the occurrence of lichens and bryophytes along the edge‐interior gradient in the Q. pyrenaica forest. Results: Microclimatic parameters vary in a non‐linear way; edge and interior stands showed the most divergent and extreme values. Although the micro‐environment within Mediterranean forests is heterogeneous, interior conditions are apparently suitable for the performance of some specific forest epiphytes. Consequently, species richness does not show significant differences along the gradient. Total epiphytic cover increases towards the forest interior, but distance to the edge together with other predictors at the tree scale (aspect and height of the square) are the most relevant predictors for the composition and structure of these communities. Conclusions: Composition and structure of epiphytic communities in a Mediterranean semi‐deciduous forest are affected by the edge between the forest and the road constructed. Since some extremely rare lichens only occur at interior stands, the conservation of these threatened elements requires urgent conservation measures because well preserved and unmanaged forests in the Mediterranean region are very rare.