植物萜类合成酶3-羟基-3-甲基戊二酰辅酶A还原酶的生物信息学分析

采用生物信息学的方法和工具对已在GenBank上注册的橡胶、烟草、辣椒、穿心莲等植物的萜类合成酶3-羟基-3-甲基戊二酰辅酶A还原酶的核酸及氨基酸序列进行分析,并对其组成成分、信号肽、跨膜拓朴结构域、疏水性/亲水性、蛋白质二级及三级结构、分子系统进化关系等进行预测和推断。结果表明该类酶基因的全长包括5′、3′非翻译区和一个开放阅读框,无信号肽,是一个跨膜的亲水性蛋白,包括两个功能HMG-CoA结合motif及两个功能NADPH结合motif,α-螺旋和不规则盘绕是蛋白质二级结构最大量的结构元件,β-转角和延伸链散布于整个蛋白质中,蛋白质的功能域在空间布局上折叠成“V”形,“V”形的两臂由螺旋状的N结构域和S结构域构成,中间部分由L结构域构成。     

高等植物的3-羟基-3-甲基戊二酰辅酶A还原酶

介绍了植物3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)的结构和调控,并简略讨论了HMGR调控与植物类异戊二烯途径的关系.     

植物3-羟基-3-甲基戊二酰辅酶A还原酶基因研究进展

细胞分裂素、赤霉素、脱落酸、叶绿素、萜类等类异戊二烯物质,是植物中广泛存在的一类代谢产物,在植物生长发育过程中起着非常重要的作用。一些萜类化合物作为药物的合成前体或有效的药用成分在工农业及医药生产上具有重要的经济价值。类异戊二烯物质主要通过甲羟戊酸代谢途径中的一系列酶催化合成,其中,3-羟基-3-甲基戊二酰辅酶A还原酶(3-hydroxy-3-methylglutaryl coenzyme A reductase, HMGR)是该代谢途径中的第一个关键限速酶,能够将3-羟基-3-甲基戊二酰辅酶A转化成中间代谢产物甲羟戊酸。对植物HMGR基因的克隆、酶结构和功能分析、基因组织表达及调控等方面进行了综述,旨在为其在重要农作物的遗传改良、代谢产物工程植物创制以及植物亲缘关系分析中的应用等研究提供理论依据。     

菊花等中药水煎剂对离体大鼠肝细胞微粒体羟甲基戊二酰辅酶A还原酶的作用机理

The isolated rat hepatic microsomal preparation was incubated with the aqueous extracts of Flos chryranthemi(菊花), Curcuma aromatica Salisb(郁金), Acan- thopanax senticosus (刺五加), Rhizoma ligustici wallichii (川芎), Radix polygoni multiflori (首乌) and Fructus crataegi pinnatifidae (山楂), respectively (37% 20 min). The activity of hydroxymethlglutaryl coenzyme A reductase was found to decrese about 30 % corresponding to the action of 50mmol/L NaF at similar condition. The mechanism of action of the Chinese drugs was the inhibition of cytosolic protein phosphatase and the activation of cytosolic hydroxymethylglutaryl CoA reductase kinase. Both the results of these two actions suppressed the activity of HMG-CoA reductase.     

麦红吸浆虫3-羟基-3-甲基戊二酰辅酶A还原酶基因SmHMGR的克隆及在滞育与发育变态过程中的表达动态

【目的】3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)是保幼激素(JH)合成途径的限速酶。麦红吸浆虫Sitodiplosis mosellana是一种典型的专性幼虫滞育昆虫。本研究旨在探讨HMGR基因在麦红吸浆虫滞育和发育变态过程中的作用。【方法】通过RT-PCR和RACE技术克隆麦红吸浆虫滞育前幼虫HMGR基因全长cDNA序列;利用生物信息学软件分析HMGR基因核苷酸和其编码的蛋白氨基酸序列特性;采用qPCR技术测定其在麦红吸浆虫滞育不同时期3龄幼虫及不同发育阶段(1-2龄幼虫、预蛹、初蛹、中蛹和后蛹以及雌雄成虫)中的mRNA表达水平。【结果】克隆获得一条麦红吸浆虫HMGR基因全长cDNA序列,命名为SmHMGR(GenBank登录号: MG876766)。该基因全长2 548 bp,其中开放阅读框长2 328 bp,编码775个氨基酸,预测的蛋白分子量为84.16 kD,理论等电点为8.29。序列分析发现该基因编码的蛋白具有HMGR蛋白家族典型的HMG-CoA-reductase-classⅠ催化功能域及其他保守功能基序;序列比对和系统发育分析表明,SmHMGR与达氏按蚊Anopheles darling等长角亚目(Nematocera)昆虫HMGR的相似性最高、亲缘关系最近。SmHMGR在麦红吸浆虫滞育前的3龄早期幼虫中表达量显著升高,进入滞育后一直维持较高水平,并在滞育后静息阶段的当年12月至翌年1月达到最高。SmHMGR在蛹期表达量低于幼虫期,预蛹期表达量最低;在雌成虫中表达量显著高于在蛹和雄成虫中的表达量。【结论】SmHMGR的表达与麦红吸浆虫发育密切相关,可能在滞育诱导、维持及滞育后静息状态的维持及生殖中发挥作用,其表达量的降低可能参与了幼虫到蛹的变态。     

家蚕3-羟酰辅酶A脱氢酶基因全长cDNA克隆及其在质型多角体病毒感染家蚕的差异表达

家蚕质型多角体病毒(Bombyx mori cytoplasmic polyhedrosis virus,BmCPV)是家蚕的重要病毒病原之一,往往给养蚕业生产造成极大危害。我们以前的研究运用基因芯片技术在感染质型多角体病毒的家蚕中肠中鉴定出一个差异表达的3-羟酰辅酶A脱氢酶蛋白基因(Bombyx mori3-hydroxyacyl-CoA dehyrogenase protein gene-Bm3HAD)。本研究利用cDNA末端快速扩增技术(RACE)克隆了该基因,其全长cDNA序列为1168bp,包含一个83bp5’端非翻译区序列(5’-UTR)、一个930bp的开放阅读框(ORF)和一个155bp的3’端非翻译区序列(3’-UTR);基因结构分析发现该基因由5个外显子和4个内含子组成。RT-PCR结果显示该基因在家蚕中肠、脂肪体、血液、丝腺及生殖体中均有表达。荧光定量PCR结果表明该基因在BmCPV感染初期为上调表达,随着病毒感染的进展,该基因的表达水平逐渐降低,并转变为下调表达。研究结果为进一步研究BmCPV对家蚕致病的分子机制提供了有益的信息。     

京大戟hmgr基因家族3个保守区片段的克隆与分析

采用RT-PCR技术以及两条简并引物,以京大戟嫩叶总RNA反转录的cDNA为模板扩增3-羟基-3-甲基戊二酰辅酶A还原酶基因的保守区片断。序列分析表明,所克隆的cDNA保守区序列长度为458 bp,而且同时得到了三个不同的核苷酸序列,分别命名为hmgr1、hmgr2、hmgr3。与之前得到的京大戟hmgr保守区片段的核苷酸序列的同源性分别为98.03%、96.29%、78.38%,推断的相应氨基酸序列的同源性分别为98.68％、96.71%和85.53%。推断这可能是该基因家族中的三个新的成员。而且同源序列比对发现,由这三个核苷酸序列推断的氨基酸序列与其它植物都有较高的同源性。种系进化树分析表明hmgr3与hmgr1、hmgr2及以前报道的京大戟的hmgr之间有较大的差别。     

大戟甲羟戊酸途径关键酶基因hmgr的克隆与分析

通过比较6种植物8条甲羟戊酸途径关键酶3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)基因同源区域,设计简并引物,利用RT-PCR技术成功地从大戟(Euphorbia pekinensis)叶中扩增出458bp的基因片段。通过BlastP比较,所推断的大戟HMGR蛋白序列与杜仲Eucommia ulmoides(AAV54051)、穿心莲Andrographis paniculata(AAP14352)、胡黄连Picrorhiza kurrooa(ABC74565)、橡胶树Hevea brasiliensis(AAU08214)、海岛棉Gossypium barba-dense(ABC71314)、龙胆草Gentiana lutea(BAE92730)的一致性分别达到90%、86%、86%、92%、87%和88%。蛋白质保守区、特征区以及进化树分析,初步证实该基因为hmgr基因,这是首次报道从药用植物大戟中克隆到甲羟戊酸途径关键酶HMGR的基因片段。     

大戟甲羟戊酸途径关键酶基因hmgr的克隆与分析

通过比较6种植物8条甲羟戊酸途径关键酶3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)基因同源区域,设计简并引物,利用RT-PCR技术成功地从大戟(Euphorbia pekinensis)叶中扩增出458bp的基因片段。通过BlastP比较,所推断的大戟HMGR蛋白序列与杜仲Eucommia ulmoides(AAV54051)、穿心莲Andrographis paniculata(AAP14352)、胡黄连Picrorhiza kurrooa(ABC74565)、橡胶树Hevea brasiliensis(AAU08214)、海岛棉Gossypium barbadense(ABC71314)、龙胆草Gentiana lutea(BAE92730)的一致性分别达到90%、86%、86%、92%、87%和88%。蛋白质保守区、特征区以及进化树分析,初步证实该基因为hmgr基因,这是首次报道从药用植物大戟中克隆到甲羟戊酸途径关键酶HMGR的基因片段。     

滇龙胆8-羟香叶醇氧化还原酶基因的克隆与表达分析

滇龙胆主要药效成分为龙胆苦苷,而8-羟香叶醇氧化还原酶基因Gr8HGO是龙胆苦苷生物合成途径的结构基因。为了研究Gr8HGO基因的功能,该文克隆了滇龙胆Gr8HGO基因,并进行表达分析。结果表明:(1)共克隆到5个Gr8HGO基因,其GenBank登录号分别为KP722029.1 (Gr8HGO-1)、KP722030.1(Gr8HGO-2)、KP722031.1(Gr8HGO-3)、KP722032.1(Gr8HGO-4)、KP723852.1(Gr8HGO-5)。(2) Gr8HGO-1基因全长1 062 bp,编码353个氨基酸,其他4个基因全长1 131 bp,编码376个氨基酸;理化性质分析结果表明5个蛋白单体相对分子质量约40 kD,理论等电点在5.47～5.95之间,均为疏水稳定蛋白。(3)信号序列分析结果表明5个蛋白均不含信号肽、跨膜螺旋和叶绿体转运肽;亚细胞定位分析结果表明5个蛋白可能定位于细胞质;结构域预测结果表明除Gr8HGO-1蛋白仅包含乙醇脱氢酶N端结构域(IPR013154)和C端结构域(IPR013149)外,其他4个蛋白还包含聚酮合酶、烯酰还原酶结构域(...     

Cloning and characterization of a novel 3-hydroxy-3-methylglutaryl coenzyme A reductase gene from Salvia miltiorrhiza involved in diterpenoid tanshinone accumulation

The 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) catalyzes the conversion of HMG-CoA to mevalonate (MVA), which is a rate-limiting step in the isoprenoid biosynthesis via the MVA pathway. In this study, the full-length cDNA encoding HMGR (designated as SmHMGR2, GenBank accession no. FJ747636) was isolated from Salvia miltiorrhiza by rapid amplification of cDNA ends (RACE). The cloned gene was then transformed into the hairy root of S. miltiorrhiza, and the enzyme activity and production of diterpenoid tanshinones and squalene were monitored. The full-length cDNA of SmHMGR2 comprises 1959 bp, with a 1653-bp open reading frame encoding a 550-amino-acid protein. Molecular modeling showed that SmHMGR2 is a new HMGR with a spatial structure similar to other plant HMGRs. SmHMGR2 contains two HMG-CoA-binding motifs and two NADP(H)-binding motifs. The SmHMGR2 catalytic domain can form a homodimer. The deduced protein has an isoelectric point of 6.28 and a calculated molecular weight of approximately 58.67 kDa. Sequence comparison analysis showed that SmHMGR2 had the highest homology to HMGR from Atractylodes lancea. As expected, a phylogenetic tree analysis indicates that SmHMGR2 belongs to plant HMGR group. Tissue expression pattern analysis shows that SmHMGR2 is strongly expressed in the leaves, stem, and roots. Functional complementation of SmHMGR2 in HMGR-deficient mutant yeast JRY2394 demonstrates that SmHMGR2 mediates the MVA biosynthesis in yeasts. Overexpression of SmHMGR2 increased enzyme activity and enhanced the production of tanshinones and squalene in cultured hairy roots of S. miltiorrhiza. Our DNA gel blot analysis has confirmed the presence and integration of the associated SmHMGR2 gene. SmHMGR2 is a novel and important enzyme involved in the biosynthesis of diterpenoid tanshinones in S. miltiorrhiza.     

Interference with the determination of 3-hydroxy-3-methylglutaryl coenzyme A reductase activity and its properties by a microsomal enzymic activity.

Rat liver microsomes and microsomal extracts contain an enzymic activity which competes with 3-hydroxy-3-methylglutaryl coenzyme A reductase for 3-hydroxy-3-methylglutaryl coenzyme A. The presence of this activity in enzyme preparations causes errors in the determination of reductase activity and its properties. This contaminant can be removed by gel filtration using Bio-Gel A 1.5m, by washing the microsomes, or by incubating the microsomal extract at 37 °C. The K_m's of the reductase (free of this competing enzymic activity) for d-3-hydroxy-3-methylglutaryl coenzyme A and NADPH are 1.3 and 26 μm, respectively.     

Proteinase involvement in the solubilization of 3-hydroxy-3-methylglutaryl coenzyme a reductase

This paper demonstrates that a heavy particle fraction, which contains lysosomes, is required for the solubilization of HMG-CoA reductase from rat liver microsomes by the widely-used slow freeze-thaw procedure. This solubilization is effectively inhibited by the proteinase inhibitors, leupeptin and antipain, but not by phenylmethylsulfonyl fluoride, pepstatin A or N-α-p-tosyl-L-lysine methyl ester. These results suggest that a thiol proteinase, possibly derived from lysosomes, is responsible for solubilizing the reductase.     

Lack of correlation between 3-hydroxy-3-methylglutaryl coenzyme A reductase activity and lovastatin resistance in nerve growth factor treated PC-12 cells

Summary 1. The relationships among the mevalonic acid (MVA) forming enzyme, 3-hydroxy-3-methylglutaryl coenzyme A (CoA) reductase, cell growth and differentiation, and the cytotoxic effects of the reductase inhibitor lovastatin were studied in PC-12 cells, exposed to growth factors.2. When added individually, nerve growth factor (NGF), basic fibroblast growth factor, and epidermal growth factor induce an increase in HMG-CoA reductase activity in cells grown in serum-containing medium. In the presence of serum, the effect of NGF on HMG-CoA reductase is persistent.3. Short-term serum starvation and long-term NGF treatment, in combination, have an additive effect, resulting in a high reductase activity.4. Unlike serum and MVA, which downregulate levels of HMG-CoA reductase by accelerating its degradation, NGF upregulates reductase by slowing the rate of its degradation. This mechanism, however, appears to operate only in the presence of serum, as after prolonged growth with NGF in serum-free medium, cells have a low reductase activity.5. PC-12 cells grown in the absence of NGF are highly sensitive to lovastatin (25 µM) and more than 70% of the cells die after 48 hr. NGF confers lovastatin resistance on cells grown in the presence or in the absence of serum (only 30–40% cell death after 48 hr with lovastatin).6. NGF-induced resistance on lovastatin develops with time and is apparent only in the well-differentiated PC-12 cells whether or not the cells express a high reductase activity.7. Thus, levels of HMG-CoA reductase activity and lovastatin resistance in PC-12 cells are not directly correlated, though clearly inversed lovastatin cytotoxicity and elevated reductase activities are expressed during the period of cell proliferation.8. These data suggest that fully differentiated neuronal cells may not be affected by prolonged high doses of lovastatin.     

Human hepatic 3-hydroxy-3-methylglutaryl coenzyme A reductase: evidence for the regulation of enzymic activity by a bicyclic phosphorylation cascade

Microsomal human liver HMG-CoA reductase has been shown to exist in active (dephosphorylated) and inactive (phosphorylated) forms. Microsomal HMG-CoA reductase was inactivated in vitro by ATP-Mg in a time dependent manner; this inactivation was mediated by reductase kinase. Incubation of inactivated enzyme with phosphatase resulted in a time dependent reactivation (dephosphorylation). Polyacrylamide gel electrophoresis of purified HMG-CoA reductase incubated with reductase kinase and radiolabeled ATP revealed that the 32P radioactivity and HMG-CoA reductase enzymic activity were localized in a single electrophoretic position. Partial dephosphorylation of the phosphorylated enzyme was associated with loss of 32P and increase in HMG-CoA reductase activity. Human reductase kinase also exists in active and inactive forms. The active (phosphorylated) form of reductase kinase can be inactivated by incubation with phosphatase. Phosphorylation of inactive reductase kinase with ATP-Mg and a second kinase, reductase kinase kinase, was associated with a parallel increase in the enzymic activity of reductase kinase and the ability to inactivate HMG-CoA reductase. The combined results present initial evidence for the presence of human HMG-CoA reductase and reductase kinase in active and inactive forms, and the in vitro modulation of its enzymic activity by a bicyclic phosphorylation cascade. This bicyclic cascade system may provide a mechanism for short-term regulation of the pathway for cholesterol biosynthesis in man.     

Effect of an unnatural phospholipid base analog,N-isopropylethanolamine,on 3-hydroxy-3-methylglutaryl coenzyme a reductase in cultured glial and neuronal cells

Cultured C-6 glial and neuroblastoma cells were utilized to study the effect of the unnatural amino alcohol, N-isopropylethanolamine, on the microsomal enzyme, 3-hydroxy-3-methylglutaryl coenzyme A reductase. Growth of both cell types in the presence of the compound was accompanied in 24 hr by a decrease in reductase activity to 25–35% of activity in control cells. The effect was accompanied by a comparable decrease in the rate of cholesterol synthesis. However, no comparable change occurred in cell growth, fatty acid synthetase activity, or in total protein synthesis from [³H]leucine. The data suggest that the polar head groups of microsomal membrane phospholipids play an important role in the regulation of reductase activity.