Comparative morphology of the axial complex and interdependence of internal organ systems in sea urchins (Echinodermata: Echinoidea)

Background

The axial complex of echinoderms (Echinodermata) is composed of various primary and secondary body cavities that interact with each other. In sea urchins (Echinoidea), structural differences of the axial complex in "regular" and irregular species have been observed, but the reasons underlying these differences are not fully understood. In addition, a better knowledge of axial complex diversity could not only be useful for phylogenetic inferences, but improve also an understanding of the function of this enigmatic structure.

Results

We therefore analyzed numerous species of almost all sea urchin orders by magnetic resonance imaging, dissection, histology, and transmission electron microscopy and compared the results with findings from published studies spanning almost two centuries. These combined analyses demonstrate that the axial complex is present in all sea urchin orders and has remained structurally conserved for a long time, at least in the "regular" species. Within the Irregularia, a considerable morphological variation of the axial complex can be observed with gradual changes in topography, size, and internal architecture. These modifications are related to the growing size of the gastric caecum as well as to the rearrangement of the morphology of the digestive tract as a whole.

Conclusion

The structurally most divergent axial complex can be observed in the highly derived Atelostomata in which the reorganization of the digestive tract is most pronounced. Our findings demonstrate a structural interdependence of various internal organs, including digestive tract, mesenteries, and the axial complex.     

Rediscovery of an internal organ in heart urchins (Echinoidea: Spatangoida): morphology and evolution of the intestinal caecum

A thorough understanding of the sea urchin (Echinodermata: Echinoidea) digestive tract anatomy is a prerequisite for the correct interpretation of physiological and biomechanical analyses focusing on the gut architecture of this ecologically important group of marine invertebrates. A number of studies have addressed the general arrangement of the sea urchin digestive tract, but accessory structures such as siphons and caeca have received less attention. Two studies carried out to analyze the gut physiology of various marine invertebrates briefly mentioned the presence of a previously undescribed pouch in the posterior digestive tract of the heart urchin (Echinoidea: Spatangoida) species Brisaster latifrons. Dissections, histological, and magnetic resonance imaging data, as well as three-dimensional reconstructions corroborate these findings. The novel structure—here termed the intestinal caecum—is suspended by a thin mesentery within a coil formed by the posteriormost part of the intestine. The kidney-shaped organ constitutes a derivative of the intestine, to which it is laterally connected through a narrow canal. In contrast to the sediment-packed main digestive tract, the intestinal caecum is filled with liquid and a flocculent mass. The organ’s histology is characterized by a thin connective tissue layer with only a small number of hemal lacunae and muscle fibers, as well as an inner simple columnar epithelium that contains numerous dark-brown vacuoles. The intestinal caecum is found exclusively among members of the Schizasteridae (Spatangoida: Paleopneustina). Specifically, the organ is present in selected species of the genera Abatus, Brisaster, and Tripylaster, but not in the other seven schizasterid genera analyzed. The intestinal caecum is not homologous to the sometimes equally named accessory structure present in the posterior digestive tract of other spatangoid taxa such as Echinocardium or Heterobrissus. Consequently, the previously introduced term recto-intestinal caecum is here applied for this latter organ. No correlation could be found between the absence or presence of the intestinal caecum and any known biological or morphological characteristics of schizasterid heart urchins. The distribution of the organ among schizasterids supports a close relationship of the genera Brisaster, Tripylaster, and selected species of Abatus.     

Opportunities and challenges for digital morphology

Abstract  

Advances in digital data acquisition, analysis, and storage have revolutionized the work in many biological disciplines such as genomics, molecular phylogenetics, and structural biology, but have not yet found satisfactory acceptance in morphology. Improvements in non-invasive imaging and three-dimensional visualization techniques, however, permit high-throughput analyses also of whole biological specimens, including museum material. These developments pave the way towards a digital era in morphology. Using sea urchins (Echinodermata: Echinoidea), we provide examples illustrating the power of these techniques. However, remote visualization, the creation of a specialized database, and the implementation of standardized, world-wide accepted data deposition practices prior to publication are essential to cope with the foreseeable exponential increase in digital morphological data.     

Chemical composition of spines and tests of sea urchins

The skeleton of spines and tests of the species of sea urchins Strongylocentrotus intermedius, Mesocentrotus nudus, Scaphechinus mirabilis, and Echinocardium cordatum from the Sea of Japan is composed of a spongy stereom, consisting of calcite with a high content of magnesium. It was found that the tests and spines of the skeletons of sea urchins are composed of calcium–organic composite materials inlaid with other metals: Mg, Fe, Zn, and Rb. In the four species of sea urchins studied, the strength and other mechanical properties of the tests and spines differ and depend on the chemical composition and structural organization of their components. It was shown that the content of volatile substances correlates with their fragility or elasticity. It is revealed that the chemical composition of the tests of two species of the spherical sea urchins S. intermedius and M. nudus indicates significant differences between these two species of sea urchins.     

Nodal and BMP expression during the transition to pentamery in the sea urchin <Emphasis Type="Italic">Heliocidaris erythrogramma</Emphasis>: insights into patterning the enigmatic echinoderm body plan

Background

The molecular mechanisms underlying the development of the unusual echinoderm pentameral body plan and their likeness to mechanisms underlying the development of the bilateral plans of other deuterostomes are of interest in tracing body plan evolution. In this first study of the spatial expression of genes associated with Nodal and BMP2/4 signalling during the transition to pentamery in sea urchins, we investigate Heliocidaris erythrogramma, a species that provides access to the developing adult rudiment within days of fertilization.

Results

BMP2/4, and the putative downstream genes, Six1/2, Eya, Tbx2/3 and Msx were expressed in the earliest morphological manifestation of pentamery during development, the five hydrocoele lobes. The formation of the vestibular ectoderm, the specialized region overlying the left coelom that forms adult ectoderm, involved the expression of putative Nodal target genes Chordin, Gsc and BMP2/4 and putative BMP2/4 target genes Dlx, Msx and Tbx. The expression of Nodal, Lefty and Pitx2 in the right ectoderm, and Pitx2 in the right coelom, was as previously observed in other sea urchins.

Conclusion

That genes associated with Nodal and BMP2/4 signalling are expressed in the hydrocoele lobes, indicates that they have a role in the developmental transition to pentamery, contributing to our understanding of how the most unusual body plan in the Bilateria may have evolved. We suggest that the Nodal and BMP2/4 signalling cascades might have been duplicated or split during the evolution to pentamery.

     

Ecology and Biogeography of Free-Living Nematodes Associated with Chemosynthetic Environments in the Deep Sea: A Review

Background

Here, insight is provided into the present knowledge on free-living nematodes associated with chemosynthetic environments in the deep sea. It was investigated if the same trends of high standing stock, low diversity, and the dominance of a specialized fauna, as observed for macro-invertebrates, are also present in the nematodes in both vents and seeps.

Methodology

This review is based on existing literature, in combination with integrated analysis of datasets, obtained through the Census of Marine Life program on Biogeography of Deep-Water Chemosynthetic Ecosystems (ChEss).

Findings

Nematodes are often thriving in the sulphidic sediments of deep cold seeps, with standing stock values ocassionaly exceeding largely the numbers at background sites. Vents seem not characterized by elevated densities. Both chemosynthetic driven ecosystems are showing low nematode diversity, and high dominance of single species. Genera richness seems inversely correlated to vent and seep fluid emissions, associated with distinct habitat types. Deep-sea cold seeps and hydrothermal vents are, however, highly dissimilar in terms of community composition and dominant taxa. There is no unique affinity of particular nematode taxa with seeps or vents.

Conclusions

It seems that shallow water relatives, rather than typical deep-sea taxa, have successfully colonized the reduced sediments of seeps at large water depth. For vents, the taxonomic similarity with adjacent regular sediments is much higher, supporting rather the importance of local adaptation, than that of long distance distribution. Likely the ephemeral nature of vents, its long distance offshore and the absence of pelagic transport mechanisms, have prevented so far the establishment of a successful and typical vent nematode fauna. Some future perspectives in meiofauna research are provided in order to get a more integrated picture of vent and seep biological processes, including all components of the marine ecosystem.     

A simulation study comparing supertree and combined analysis methods using SMIDGen

Background  

Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined into a tree (the "supertree") on the entire set of taxa. Supertrees can be constructed using various algorithmic techniques, with the most common being matrix representation with parsimony (MRP). When the data allow, the competing approach is a combined analysis (also known as a "supermatrix" or "total evidence" approach) whereby the different sequence data matrices for each of the different subsets of taxa are concatenated into a single supermatrix, and a tree is estimated on that supermatrix.     

Cholecystokinin in White Sea Bream: Molecular Cloning,Regional Expression,and Immunohistochemical Localization in the Gut after Feeding and Fasting

Background

The peptide hormone cholecystokinin (CCK), secreted by the midgut, plays a key role in digestive physiology of vertebrates including teleosts, by stimulating pancreatic secretion, gut motility, and gallbladder contraction, as well as by delaying gastric emptying. Moreover, CCK is involved in the regulation of food intake and satiation. Secretion of CCK by the hindgut is controversial, and its biological activity remains to be elucidated. The present paper addresses the regional distribution of intestinal CCK in the white sea bream, Diplodus sargus, as well as the possible involvement of hindgut CCK in digestive processes.

Methodology/Principal Findings

Full-lengths mRNAs encoding two CCK isoforms (CCK-1 and CCK-2) were sequenced and phylogenetically analyzed. CCK gene and protein expression levels in the different gut segments were measured 3 h and 72 h after feeding, by quantitative real-time RT-PCR and Western blot, respectively. Moreover, endocrine CCK cells were immunoistochemically detected. Fasting induced a significant decrease in CCK-2 in all intestinal segments, including the hindgut. On the other hand, no significant difference was induced by fasting on hindgut CCK-1.

Conclusions/Significance

The results demonstrated two CCK isoforms in the hindgut of D.sargus, one of which (CCK-2) may be involved in the feedback control of uncompleted digestive processes. On the other hand, a functional role alternative to regulation of digestive processes may be inferred for D.sargus CCK-1, since its expression was unaffected by feeding or fasting.     

遮蔽行为对海刺猬摄食、生长和性腺性状的影响

海胆遮蔽行为对于海胆的生长和发育的影响目前还不清楚,在实验室条件下,研究了遮蔽行为对海刺猬(Glyptocidariscrenularis)摄食、生长和性腺性状的影响。实验设两个对照组和一个处理组:对照组为无任何遮蔽条件的空白组和以堆积砖块创造的黑暗空间来满足海胆的掩蔽行为的掩蔽组,遮蔽组则以菲律宾蛤仔(Ruditapes philippinarum)的贝壳作为遮蔽物来满足海胆的遮蔽行为。结果显示:遮蔽组的海胆周摄食量要显著大于掩蔽组(P<0.05),而空白组与遮蔽组和掩蔽组之间的差异不显著(P>0.05);各组海胆的存活率没有显著差异(P>0.05);空白组和遮蔽组海胆的壳径、壳高、体重要显著大于掩蔽组(P<0.05),而空白组和遮蔽组之间没有显著性的差异(P>0.05);空白组和遮蔽组的性腺湿重、性腺干重、性腺指数、壳湿重、壳干重、亚氏提灯湿重、亚氏提灯干重要显著大于掩蔽组(P<0.05),而空白组和遮蔽组之间没有显著性的差异(P>0.05);空白组的提灯指数要显著小于遮蔽组和掩蔽组(P<0.05),而遮蔽组和掩蔽组之间没有显著的差异(P>0.05)。结果证明,遮蔽和掩蔽行为对海刺猬生长及发育的影响是有差别的,掩蔽行为对海刺猬的生长与发育造成了负面影响,而遮蔽行为在一定的生活环境条件下不会对其生长造成影响。研究表明,海刺猬的遮蔽行为反映了其对外界不利环境条件的一种适应性,且这种行为对其生长和发育的影响与掩蔽行为有所不同。至于海刺猬遮蔽行为的进化选择压力,目前的研究还不足以下定论,需要进一步深入的研究。     

Reproductive biology and species geographical distribution in the Melastomataceae: a survey based on New World taxa

Background and Aims

Floral variation, pollination biology and mating patterns were investigated in sunbird-pollinated Babiana (Iridaceae) species endemic to the Western Cape of South Africa. The group includes several taxa with specialized bird perches and it has been proposed that these function to promote cross-pollination.

Methods

Pollinator observations were conducted in 12 populations of five taxa (B. ringens subspp. ringens, australis, B. hirsuta, B. avicularis, B. carminea) and geographic variation in morphological traits investigated in the widespread B. ringens. Experimental pollinations were used to determine the compatibility status, facility for autonomous self-pollination and intensity of pollen limitation in six populations of four taxa. Allozyme markers were employed to investigate mating patterns in four populations of three species.

Key Results

Sunbirds were the primary pollinators of the five Babiana taxa investigated. Correlated geographical variation in perch size, flower size and stigma–anther separation was evident among B. ringens populations. Experimental pollinations demonstrated that B. ringens and B. avicularis were self-compatible with variation in levels of autonomous self-pollination and weak or no pollen limitation of seed set. In contrast, B. hirsuta was self-incompatible and chronically pollen limited. Estimates of outcrossing rate indicated mixed mating with substantial self-fertilization in all species investigated.

Conclusions

Despite the possession of specialized bird perches in B. ringens and B. avicularis, these structures do not prevent considerable selfing from occurring, probably as a result of autonomous self-pollination. In eastern populations of B. ringens, smaller flowers and reduced herkogamy appear to be associated with a shift to predominant selfing. Relaxed selection on perch function due to increased selfing may explain the increased incidence of apical flowers in some populations.     

Concentrations of trace elements in sea urchins and macroalgae commonly present in <Emphasis Type="Italic">Sargassum</Emphasis> beds: implications for trophic transfer

The aim of the study was to evaluate the dynamic of cadmium, lead, copper, zinc, and iron among lower trophic levels, sea urchins and macroalgae. Diets and isotopic values were used in combination to explore trophic positions and potential transference of metals from primary producers to consumers. Concentrations of trace elements were measured in two species of sea urchin (Tripneustes depressus and Eucidaris thouarsii) and nine macroalgae that are usually used as food in four Sargassum beds, one of which is close to a phosphorite mine. Specimens were collected when Sargassum fronds were at their greatest (winter) and lowest (summer) abundance. Highest concentrations of Cd, and Cu in both urchin species were recorded in winter at the site near the phosphorite mine. Concentrations of Pb in T. depressus were below the detectable limit, whereas E. thouarsii, which in addition to a high concentration of Pb, had high amounts of Cu and Zn. Gut content analysis, indicates that the diet of both sea urchins at the four sites and two collection dates is mainly macroalgae. The δ ¹⁵N isotopic values in sea urchins in a typical Sargassum bed were in good agreement with a diet dominated by macroalgae, with T. depressus having herbivorous habits and E. thouarsii having omnivorous habits in this environment. We found macroalgae important in the dynamics of metals in food webs, potentially contributing to transferring Cd, Cu, and Zn to key invertebrate species, such as sea urchins, indicating connectivity of food webs and ecological structuring of marine environments.     

Two more Posterior Hox genes and Hox cluster dispersal in echinoderms

Background

Hox genes are key elements in patterning animal development. They are renowned for their, often, clustered organisation in the genome, with supposed mechanistic links between the organisation of the genes and their expression. The widespread distribution and comparable functions of Hox genes across the animals has led to them being a major study system for comparing the molecular bases for construction and divergence of animal morphologies. Echinoderms (including sea urchins, sea stars, sea cucumbers, feather stars and brittle stars) possess one of the most unusual body plans in the animal kingdom with pronounced pentameral symmetry in the adults. Consequently, much interest has focused on their development, evolution and the role of the Hox genes in these processes. In this context, the organisation of echinoderm Hox gene clusters is distinctive. Within the classificatory system of Duboule, echinoderms constitute one of the clearest examples of Disorganized (D) clusters (i.e. intact clusters but with a gene order or orientation rearranged relative to the ancestral state).

Results

Here we describe two Hox genes (Hox11/13d and e) that have been overlooked in most previous work and have not been considered in reconstructions of echinoderm Hox complements and cluster organisation. The two genes are related to Posterior Hox genes and are present in all classes of echinoderm. Importantly, they do not reside in the Hox cluster of any species for which genomic linkage data is available.

Conclusion

Incorporating the two neglected Posterior Hox genes into assessments of echinoderm Hox gene complements and organisation shows that these animals in fact have Split (S) Hox clusters rather than simply Disorganized (D) clusters within the Duboule classification scheme. This then has implications for how these genes are likely regulated, with them no longer covered by any potential long-range Hox cluster-wide, or multigenic sub-cluster, regulatory mechanisms.

     

Low endemism,continued deep-shallow interchanges,and evidence for cosmopolitan distributions in free-living marine nematodes (order Enoplida)

Background  

Nematodes represent the most abundant benthic metazoa in one of the largest habitats on earth, the deep sea. Characterizing major patterns of biodiversity within this dominant group is a critical step towards understanding evolutionary patterns across this vast ecosystem. The present study has aimed to place deep-sea nematode species into a phylogenetic framework, investigate relationships between shallow water and deep-sea taxa, and elucidate phylogeographic patterns amongst the deep-sea fauna.     

Predation of the sea urchin Heliocidaris erythrogramma by rock lobsters (Jasus edwardsii) in no-take marine reserves

The formation of sea urchin ‘barrens’ on shallow temperate rocky reefs is well documented. However there has been much conjecture about the underlying mechanisms leading to sea urchin barrens, and relatively little experimentation to test these ideas critically. We conducted a series of manipulative experiments to determine whether predation mortality is an important mechanism structuring populations of the sea urchin Heliocidaris erythrogramma in Tasmania. Tethered juvenile and adult sea urchins experienced much higher rates of mortality inside no-take marine reserves where sea urchin predators were abundant compared to adjacent fished areas where predators were fewer. Mortality of tagged (but not tethered) sea urchins was also notably higher in marine reserves than in adjacent areas open to fishing. When a range of sizes of sea urchins was exposed to three sizes of rock lobsters in a caging experiment, juvenile sea urchins were eaten more frequently than larger sea urchins by all sizes of rock lobster, but only the largest rock lobsters (> 120 mm CL) were able to consume large adult sea urchins. Tagging (but not tethering) juvenile and adult sea urchins in two separate marine reserves indicated that adult sea urchins experience higher predation mortality than juveniles, probably because juveniles can shelter in cryptic microhabitat more effectively. In a field experiment in which exposure of sea urchins to rock lobster (Jasus edwardsii) and demersal reef fish predators was manipulated, rock lobsters were shown to be more important than fish as predators of adult sea urchins in a marine reserve. We conclude that predators, and particularly rock lobsters, exert significant predation mortality on H. erythrogramma in Tasmanian marine reserves, and that adult sea urchins are more vulnerable than smaller cryptic individuals. Fishing of rock lobsters is likely to reduce an important component of mortality in H. erythrogramma populations.     

Annelid phylogeny and the status of Sipuncula and Echiura

Background  

Annelida comprises an ancient and ecologically important animal phylum with over 16,500 described species and members are the dominant macrofauna of the deep sea. Traditionally, two major groups are distinguished: Clitellata (including earthworms, leeches) and "Polychaeta" (mostly marine worms). Recent analyses of molecular data suggest that Annelida may include other taxa once considered separate phyla (i.e., Echiura, and Sipuncula) and that Clitellata are derived annelids, thus rendering "Polychaeta" paraphyletic; however, this contradicts classification schemes of annelids developed from recent analyses of morphological characters. Given that deep-level evolutionary relationships of Annelida are poorly understood, we have analyzed comprehensive datasets based on nuclear and mitochondrial genes, and have applied rigorous testing of alternative hypotheses so that we can move towards the robust reconstruction of annelid history needed to interpret animal body plan evolution.     

Do sulphuric acid and the brown alga <Emphasis Type="Italic">Desmarestia viridis</Emphasis> support community structure in Arctic kelp patches by altering grazing impact,distribution patterns,and behaviour of sea urchins?

Macrobenthic community structure and the distribution of the green sea urchin (Strongylocentrotus droebachiensis) were recorded inside and outside (=barrens) of kelp patches (Alaria esculenta) at Kongsfjordneset, Svalbard between August 2002 and October 2006. In manipulative field experiments, conducted at Kongsfjordneset, Svalbard in August 2002, the effect of the presence of the brown seaweed Desmarestia viridis on sea urchin distribution and kelp grazing was determined. Additionally, we studied the effect of sulphuric acid, which is produced and stored by D. viridis, on sea urchin movements in the laboratory at Ny-Ålesund, Svalbard, in May 2006. Sea urchin densities were two- to threefold lower in kelp patches than on barrens. The macrobenthic community inside kelp patches hosted 39% more species and was of different species composition than on barrens. Anchored pieces of the kelp A. esculenta were less consumed when surrounded by D. viridis than non-surrounded conspecifics. Changes in pH affected the behaviour of sea urchins. Exposing sea urchins to 500 μl seawater at pH 7.5 caused them to stop, while the exposure of as little as 25 μl at pH 1 caused sea urchins to move in the opposite direction. Acid-mediated escape responses in sea urchin behaviour suggest chemical protection by D. viridis as an additional mechanism to mechanical protection in the generation of kelp refuges. These results improve our understanding of how isolated kelp beds can persist over a wide range of environmental conditions, like wave-sheltered sites, and suggest that changes in community structure may be in part attributable to altered trophic interactions.     

Latitudinal patterns of egg size and maternal investment trade-offs in reef corals

Aim

The aims were to test the role of temperature in latitudinal patterns of egg size and investigate maternal investment trade-offs among coral taxa.

Location

Global, from 34° S to 34° N.

Time period

1981–2020.

Major taxa studied

Reef coral species from the order Scleractinia.

Methods

We compiled a comprehensive geo-referenced global dataset of egg sizes (diameter or volume) and fecundity (number of eggs per area) for colonial corals (Scleractinia; 123 species, 5359 observations and 39 localities), substantially enhanced by new field collections (>88% of observations). We used Bayesian phylogenetic multilevel models to test for Rass' rule (a hypothesized negative relationship between egg size and temperature); we also included other environmental variables and life history traits. We also tested whether a trade-off exists between egg size and fecundity in broadcast spawning hermaphroditic corals with horizontal symbiont transmission (HHT).

Results

We found a significant relationship between coral egg size and symbiont transmission. Eggs from coral species with vertical symbiont transmission were c. 18.8% smaller than those from species with horizontal symbiont transmission. We also found non-significant relationships between egg size and sea surface temperature (SST) for broadcast spawning corals and between egg size and fecundity specifically for HHT species.

Main conclusions

Contrary to recognized latitudinal patterns of egg size across taxa, our study does not provide support for Rass' rule in corals. Additionally, our findings do not support a maternal investment trade-off between egg size and fecundity for HHT species. Our study used a phylogenetic framework that should be a standard practice when studying interspecific variation, including investigation of maternal investment and identification of the influence of multiple predictors on larval fitness (egg size), in addition to trade-offs affecting propagule influx (fecundity). Both these functional traits are vital and have direct consequences for population maintenance and connectivity in sessile organisms, such as corals.