Empirical and theoretical challenges in aboveground–belowground ecology

A growing body of evidence shows that aboveground and belowground communities and processes are intrinsically linked, and that feedbacks between these subsystems have important implications for community structure and ecosystem functioning. Almost all studies on this topic have been carried out from an empirical perspective and in specific ecological settings or contexts. Belowground interactions operate at different spatial and temporal scales. Due to the relatively low mobility and high survival of organisms in the soil, plants have longer lasting legacy effects belowground than aboveground. Our current challenge is to understand how aboveground–belowground biotic interactions operate across spatial and temporal scales, and how they depend on, as well as influence, the abiotic environment. Because empirical capacities are too limited to explore all possible combinations of interactions and environmental settings, we explore where and how they can be supported by theoretical approaches to develop testable predictions and to generalise empirical results. We review four key areas where a combined aboveground–belowground approach offers perspectives for enhancing ecological understanding, namely succession, agro-ecosystems, biological invasions and global change impacts on ecosystems. In plant succession, differences in scales between aboveground and belowground biota, as well as between species interactions and ecosystem processes, have important implications for the rate and direction of community change. Aboveground as well as belowground interactions either enhance or reduce rates of plant species replacement. Moreover, the outcomes of the interactions depend on abiotic conditions and plant life history characteristics, which may vary with successional position. We exemplify where translation of the current conceptual succession models into more predictive models can help targeting empirical studies and generalising their results. Then, we discuss how understanding succession may help to enhance managing arable crops, grasslands and invasive plants, as well as provide insights into the effects of global change on community re-organisation and ecosystem processes.     

Elevated CO2 and aboveground–belowground herbivory by the clover root weevil

Predicted increases in atmospheric carbon dioxide (CO₂) concentrations are expected to increase primary productivity in many terrestrial ecosystems, which could lead to plants becoming N limited. Studies suggest that legumes may partially overcome this by increasing biological nitrogen fixation. However, these studies have not yet considered how these changes may be affected by the altered dynamics of insect herbivores feeding on the plant. This study investigated how elevated CO₂ (700 μl l^?1) affected the clover root weevil (Sitona lepidus), a significant pest of white clover (Trifolium repens). Adults feed on leaves aboveground where they lay eggs; soil-dwelling larvae initially feed on root nodules that house N₂-fixing bacteria. Foliar C:N ratios rose by 9% at elevated CO₂, but the biggest responses were observed belowground, with increases in root mass (85% greater) and nodule abundance (220% more abundant). Root C:N ratios increased significantly from 10.95 to 11.60 under elevated CO₂, which increased even further to 13.13 when nodules were attacked by larval S. lepidus. Adult S. lepidus consumed significantly more leaf tissue at elevated CO₂ (0.47 cm² day^?1) compared with ambient CO₂ (0.35 cm² day^?1), suggesting compensatory feeding, but laid 23% fewer eggs at elevated CO₂. Even though fewer eggs were laid at elevated CO₂, 38% more larvae were recovered suggesting that larval survival was much better under elevated CO₂. Increased larval abundance and performance at elevated CO₂ were positively correlated with the number of nodules available. In conclusion, reduced foliar quality at elevated CO₂ was generally disadvantageous for adult S. lepidus living aboveground, but extremely beneficial for S. lepidus larvae living belowground, due to the enhanced nodulation. Climate change may, therefore, enhance biological nitrogen fixation by T. repens, but potential benefits (e.g. provision of N without chemical fertilizers) may be undermined by larger populations of S. lepidus larvae belowground.     

Connecting plant–microbial interactions above and belowground: a fungal endophyte affects decomposition

Mutualisms can strongly affect the structure of communities, but their influence on ecosystem processes is not well resolved. Here we show that a plant–microbial mutualism affects the rate of leaf litter decomposition using the widespread interaction between tall fescue grass (Lolium arundinaceum) and the fungal endophyte Neotyphodium coenophialum. In grasses, fungal endophytes live symbiotically in the aboveground tissues, where the fungi gain protection and nutrients from their host and often protect host plants from biotic and abiotic stress. In a field experiment, decomposition rate depended on a complex interaction between the litter source (collected from endophyte-infected or endophyte-free plots), the decomposition microenvironment (endophyte-infected or endophyte-free plots), and the presence of mesoinvertebrates (manipulated by the mesh size of litter bags). Over all treatments, decomposition was slower for endophyte-infected fescue litter than for endophyte-free litter. When mesoinvertebrates were excluded using fine mesh and litter was placed in a microenvironment with the endophyte, the difference between endophyte-infected and endophyte-free litter was strongest. In the presence of mesoinvertebrates, endophyte-infected litter decomposed faster in microenvironments with the endophyte than in microenvironments lacking the endophyte, suggesting that plots differ in the detritivore assemblage. Indeed, the presence of the endophyte in plots shifted the composition of Collembola, with more Hypogastruridae in the presence of the endophyte and more Isotomidae in endophyte-free plots. In a separate outdoor pot experiment, we did not find strong effects of the litter source or the soil microbial/microinvertebrate community on decomposition, which may reflect differences between pot and field conditions or other differences in methodology. Our work is among the first to demonstrate an effect of plant–endophyte mutualisms on ecosystem processes under field conditions.     

Does disturbance affect bud bank size and belowground structures diversity in Brazilian subtropical grasslands?

Brazilian Campos grasslands are ecosystems under high frequency of disturbance by grazing and fires. Absence of such disturbances may lead to shrub encroachment and loss of plant diversity. Vegetation regeneration after disturbance in these grasslands occurs mostly by resprouting from belowground structures. We analyzed the importance of bud bank and belowground bud bearing organs in Campos grasslands. We hypothesize that the longer the intervals between disturbances are, the smaller the size of the bud bank is. Additionally, diversity and frequency of belowground organs should also decrease in areas without disturbance for many years. We sampled 20 soil cores from areas under different types of disturbance: grazed, exclusion from disturbance for two, six, 15 and 30 years. Belowground biomass was sorted for different growth forms and types of bud bearing organs. We found a decrease in bud bank size with longer disturbance intervals. Forbs showed the most drastic decrease in bud bank size in the absence of disturbance, which indicates that they are very sensitive to changes in disturbance regimes. Xylopodia (woody gemmiferous belowground organs with hypocotyl-root origin) were typical for areas under influence of recurrent fires. The diversity of belowground bud bearing structures decreased in the absence of disturbance. Longer intervals between disturbance events, resulting in decrease of bud bank size and heterogeneity of belowground organs may lead to the decline and even disappearance of species that relay on resprouting from the bud bank upon disturbance.     

Root distribution,standing crop biomass and belowground productivity in a semidesert in México

In a semidesert community in México (Zapotitlán de las Salinas, Puebla) the vertical distribution of roots and root biomass was estimated at 0–100 cm depth on two sampling dates, November 1995 (wet season) and January 1998 (dry season). Root productivity at 7 to 14.5 cm depth was estimated with the in-growth core technique every two months from March 1996 to February 1998. The relationship between environmental factors and seasonal root productivity was analyzed. Finally, we tested the effect of an irrigation equivalent to 20 mm of rain on root production. Seventy four percent of the total number of roots were found at 0-40 cm depth. Very fine roots (<1 mm diameter) were found throughout the soil profile (0-100 cm). In contrast, fine roots (1-3 mm diameter) were found only from 0–90 cm depth, and coarse roots (>3 mm diameter) from 0–60 cm depth. The root biomass was 971.5 g m^–2 (S.D. = 557.39), the very fine and fine roots representing 62.9% of the total. Total root productivity, as estimated with the ingrowth core technique, was 0.031 Mg ha^–1 over the dry season and 0.315 Mg ha^–1 over the wet season. Only very fine roots were obtained at all sampling dates. Rainfall was significantly correlated with very fine root production. The difference between fine root production in non-watered (0.054 g m^–2) and watered (0.429 g m^–2) treatments was significant. The last value was the same as that predicted for a rain of 20 mm, according to the exponential model describing the relation between the production of very fine roots and rainfall at the site.     

Climate change and Epichloë coenophiala association modify belowground fungal symbioses of tall fescue host

Human alteration of symbiont genetics among aboveground endophytic Epichloë coenophiala strains within tall fescue (Schedonorus arundinaceus) has led to widespread deployment of novel grass-endophyte combinations, yet little is known about their ecological consequences. In this study, clone pairs (endophyte-infected, endophyte-free) of two tall fescue genotypes received factorial combinations of increased temperature (+3 °C) and precipitation (+30% long-term annual mean) for 2 yr. We measured root arbuscular mycorrhizal fungi (AMF), dark septate endophyte (DSE) colonization, and soil AMF extraradical hyphae (ERH) length. We hypothesized that genetically distinct grass-E. coenophiala associations would differentially affect belowground fungi, and that these relationships would be climate-sensitive. Tall fescue genotype, endophyte presence, and climate treatment interactions affected AMF arbuscules, vesicles, and ERH. DSE decreased with E. coenophiala presence but increased with warming. Genetically distinct tall fescue-E. coenophiala associations may have divergent long-term impacts on other host-symbiont interactions, potentially impacting ecosystem function and response to climate change.     

Winter cereal root growth and aboveground–belowground biomass ratios as affected by site and tillage system in dryland Mediterranean conditions

Background and aims

Understanding the interaction between crop roots and management and environmental factors can improve crop management and agricultural carbon sequestration. The objectives of this study were to determine the response of winter cereal root growth and aboveground–belowground biomass ratios to tillage and environmental factors in the Mediterranean region and to test an alternative approach to determine root surface area.

Methods

Winter cereal root growth and biomass ratios were studied in three sites with different yield potential according to their water deficit (high yield potential, HYP; medium yield potential, MYP; low yield potential, LYP) in the Ebro Valley (NE Spain). At all sites, three tillage systems were compared (conventional tillage, minimum tillage, no-tillage (NT)). Root surface density (RSD), soil water content, yield components, and grain yield were quantified and shoot-to-root and grain-to-root ratios were calculated. RSD was measured with the use of image analysis software comparing its performance to a more common intersection method.

Results

Significant differences on RSD between sites with different yield potential were found being the greatest at the HYP site and the lowest at the LYP one. Shoot-to-root ratio was 2.7 and 4.6 times greater at the HYP site than at the MYP and LYP sites, respectively. Moreover, the grain-to-root ratio was significantly affected by site, with a ratio that increased with yield potential. Tillage had no significant effects on RSD at any of the sites studied; however, tillage did affect grain yield, with NT having the greatest yields.

Conclusions

This study shows that in the Mediterranean dryland agroecosystems, winter cereals relative above- and belowground biomass growth is strongly affected by the yield potential of each area. NT in the Mediterranean areas does not limit cereal root growth and leads to greater grain yields. A highly significant linear relationship (P?<?0.001; r ² 0.77) was observed between the root surface values obtained with the free-software image analysis method and the most common intersection method, showing it to be a reliable method for quantifying root density.     

How do belowground organisms influence plant-pollinator interactions?

Aims The majority of angiosperms are pollinated by animals, and this interaction is of enormous importance in both agricultural and natural systems. Pollinator behavior is influenced by plants' floral traits, and these traits may be modified by interactions with other community members. In recent years, knowledge of ecological linkages between above- and belowground organisms has grown tremendously. Soil communities are extremely diverse, and when their interactions with plants influence floral characteristics, they have the potential to alter pollinator attraction and visitation, but plant–pollinator interactions have been neglected in studies of the direct and indirect effects of soil organism–root interactions. Here, we review these belowground interactions, focusing on the effects of nitrogen-fixing bacteria, arbuscular mycorrhizal fungi and root-feeding herbivores, and their effects on floral traits and pollinators. Further, we identify gaps in our knowledge of these indirect effects and recommend promising directions and topics that should be addressed by future research.Important findings Belowground organisms can influence a wide variety of floral traits that are important mediators of pollinator attraction, including the number and size of flowers and nectar and pollen production. Other traits that are known to influence pollinators in some plant species, such as floral volatiles, color and nectar composition, have rarely or never been examined in the context of belowground plant interactions. Despite clear effects on flowers, relatively few studies have measured pollinator responses to belowground interactions. When these indirect effects have been studied, both arbuscular mycorrhizal fungi and root herbivores were found to shift pollinator visitation patterns. Depending on the interaction, these changes may either increase or decrease pollinator attraction. Finally, we discuss future directions for ecological studies that will more fully integrate belowground ecology with pollination biology. We advocate a multilevel approach to these questions to not only document indirect effect pathways between soil interactions and pollination but also identify the mechanisms driving changes in pollinator impacts and the resultant effects on plant fitness. A more thorough understanding of these indirect interactions will advance ecological theory and may inform management strategies in agriculture and conservation biology.     

Modeling the belowground response of plants and soil biota to edaphic and climatic change—What can we expect to gain?

As atmospheric CO₂ concentrations continue to increase, so too will the emphasis placed on understanding the belowground response of plants to edaphic and climatic change. Controlled-exposure studies that address the significance of an increased supply of carbon to roots and soil biota, and the consequences of this to nutrient cycling will play a prominent role in this process. Models will also contribute to understanding the response of plants and ecosystems to changes in the earth's climate by incorporating experimental results into conceptual or quantitative frameworks from which potential feedbacks within the plant-soil system can be identified. Here we present five examples of how models can be used in this analysis and how they can contribute to the development of new hypotheses in the areas of root biology, soil biota, and ecosystem processes. Two examples illustrate the role of coarse and fine roots in nitrogen and phosphorus uptake from soils, the respiratory costs associated with this acquisition of nutrients, and the significance of root architecture in these relationships. Another example focuses on a conceptual model that has helped raise new ideas about the effects of elevated CO₂ on root and microbial biomass, and on nutrient dynamics in the rhizosphere. Difficulties associated with modeling the contribution of mycorrhizal fungi to whole-plant growth are also discussed. Finally, several broad-scale models are used to illustrate the importance of root turnover, litter decomposition, and nitrogen mineralization in determining an ecosystem's response to atmospheric CO₂ enrichment. We conclude that models are appropriate tools for use both in guiding existing studies and in identifying new hypotheses for future research. Development of models that address the complexities of belowground processes and their role in determining plant and ecosystem function within the context of rising CO₂ concentrations and associated climate change should be encouraged.     

Patterns of above- and belowground biomass allocation in China’s grasslands: Evidence from individual-level observations

Above- and belowground biomass allocation not only influences growth of individual plants, but also influences vegetation structures and functions, and consequently impacts soil carbon input as well as terrestrial ecosystem carbon cycling. However, due to sampling difficulties, a considerable amount of uncertainty remains about the root: shoot ratio (R/S), a key parameter for models of terrestrial ecosystem carbon cycling. We investigated biomass allocation patterns across a broad spatial scale. We collected data on individual plant biomass and systematically sampled along a transect across the temperate grasslands in Inner Mongolia as well as in the alpine grasslands on the Tibetan Plateau. Our results indicated that the median of R/S for herbaceous species was 0.78 in China’s grasslands as a whole. R/S was significantly higher in temperate grasslands than in alpine grasslands (0.84 vs. 0.65). The slope of the allometric relationship between above- and belowground biomass was steeper for temperate grasslands than for alpine. Our results did not support the hypothesis that aboveground biomass scales isometrically with belowground biomass. The R/S in China’s grasslands was not significantly correlated with mean annual temperature (MAT) or mean annual precipitation (MAP). Moreover, comparisons of our results with previous findings indicated a large difference between R/S data from individual plants and communities. This might be mainly caused by the underestimation of R/S at the individual level as a result of an inevitable loss of fine roots and the overestimation of R/S in community-level surveys due to grazing and difficulties in identifying dead roots. Our findings suggest that root biomass in grasslands tended to have been overestimated in previous reports of R/S.     

The ecological role of moss in a polar desert: implications for aboveground–belowground and terrestrial–aquatic linkages

The McMurdo Dry Valleys of Antarctica is one of the coldest and driest habitats on the planet. As vascular plants are absent in this region, moss is the main form of aboveground primary production with a potentially important contribution to biogeochemical cycling, yet little is known about their ecological role. To determine the relationship between moss and soil properties relevant to biogeochemistry, we sampled both from a variety of locations in the Dry Valleys. Moss presence was compared to soil properties, and we measured the plasticity of moss stoichiometry (C:N:P) across gradients in nutrient availability. Results demonstrate that many soil properties significantly differed with moss presence, particularly conductivity and pH, but there is no strong evidence that this is caused by the moss presence and not the conditions inherent to the microsites where moss was found. There is great variability in moss stoichiometry, with some significant differences between sites, but generally variability within sites is larger than variation among sites. Results suggest that the main source of moss nutrients is from the soil, rather than water, but correlations with any one nutrient source are weak, suggesting a great deal of plasticity in moss stoichiometry and nutrient uptake.     

Do elevations in temperature,CO2, and nutrient availability modify belowground carbon gain and root morphology in artificially defoliated silver birch seedlings?

Climate warming increases the risk of insect defoliation in boreal forests. Losses in photosynthetically active surfaces cause reduction in net primary productivity and often compromise carbon reserves of trees. The concurrent effects of climate change and removal of foliage on root growth responses and carbohydrate dynamics are poorly understood, especially in tree seedlings. We investigated if exposures to different combinations of elevated temperature, CO₂, and nutrient availability modify belowground carbon gain and root morphology in artificially defoliated 1‐year‐old silver birches (Betula pendula). We quantified nonstructural carbohydrates (insoluble starch as a storage compound; soluble sucrose, fructose, and glucose) singly and in combination in fine roots of plants under winter dormancy. Also the total mass, fine root proportion, water content, and length of roots were defined. We hypothesized that the measured properties are lower in defoliated birch seedlings that grow with ample resources than with scarce resources. On average, fertilization markedly decreased both the proportion and the carbohydrate concentrations of fine roots in all seedlings, whereas the effect of fertilization on root water content and dry mass was the opposite. However, defoliation mitigated the effect of fertilization on the root water content, as well as on the proportion of fine roots and their carbohydrate concentrations by reversing the outcomes. Elevation in temperature decreased and elevation in CO₂ increased the absolute contents of total nonstructural carbohydrates, whereas fertilization alleviated both these effects. Also the root length and mass increased by CO₂ elevation. This confirms that surplus carbon in birch tissues is used as a substrate for storage compounds and for cell wall synthesis. To conclude, our results indicate that some, but not all elements of climate change alter belowground carbon gain and root morphology in defoliated silver birch seedlings.     

A review of belowground biomass allocation and its response to global climatic change in grassland ecosystems北大核心CSCD

Biomass allocations between aboveground and belowground organs provide pivotal information for connecting aboveground productivity and belowground carbon sequestration. As accurate measurement of belowground biomass is essential for determining the biomass allocation, we first reviewed the methods in quantifying belowground biomass and their merits. We then presented the major advances on plant biomass allocations between aboveground and belowground organs, as well as the potential drivers such as precipitation, warming, atmospheric CO2 concentration, and nitrogen deposition. We finally provided a list of challenges in studying belowground biomass allocation for the future. This review has important implications for studies on carbon cycling in grassland ecosystems under the changing climate.     

Increases in the flux of carbon belowground stimulate nitrogen uptake and sustain the long-term enhancement of forest productivity under elevated CO₂

The earth's future climate state is highly dependent upon changes in terrestrial C storage in response to rising concentrations of atmospheric CO?. Here we show that consistently enhanced rates of net primary production (NPP) are sustained by a C-cascade through the root-microbe-soil system; increases in the flux of C belowground under elevated CO? stimulated microbial activity, accelerated the rate of soil organic matter decomposition and stimulated tree uptake of N bound to this SOM. This process set into motion a positive feedback maintaining greater C gain under elevated CO? as a result of increases in canopy N content and higher photosynthetic N-use efficiency. The ecosystem-level consequence of the enhanced requirement for N and the exchange of plant C for N belowground is the dominance of C storage in tree biomass but the preclusion of a large C sink in the soil.     

How are plant and fungal communities linked to each other in belowground ecosystems? A massively parallel pyrosequencing analysis of the association specificity of root-associated fungi and their host plants

In natural forests, hundreds of fungal species colonize plant roots. The preference or specificity for partners in these symbiotic relationships is a key to understanding how the community structures of root‐associated fungi and their host plants influence each other. In an oak‐dominated forest in Japan, we investigated the root‐associated fungal community based on a pyrosequencing analysis of the roots of 33 plant species. Of the 387 fungal taxa observed, 153 (39.5%) were identified on at least two plant species. Although many mycorrhizal and root‐endophytic fungi are shared between the plant species, the five most common plant species in the community had specificity in their association with fungal taxa. Likewise, fungi displayed remarkable variation in their association specificity for plants even within the same phylogenetic or ecological groups. For example, some fungi in the ectomycorrhizal family Russulaceae were detected almost exclusively on specific oak (Quercus) species, whereas other Russulaceae fungi were found even on “non‐ectomycorrhizal” plants (e.g., Lyonia and Ilex). Putatively endophytic ascomycetes in the orders Helotiales and Chaetothyriales also displayed variation in their association specificity and many of them were shared among plant species as major symbionts. These results suggest that the entire structure of belowground plant–fungal associations is described neither by the random sharing of hosts/symbionts nor by complete compartmentalization by mycorrhizal type. Rather, the colonization of multiple types of mycorrhizal fungi on the same plant species and the prevalence of diverse root‐endophytic fungi may be important features of belowground linkage between plant and fungal communities.     

Epichloë endophyte affects the root colonization pattern of belowground symbionts in a wild grass

Plants host multiple symbionts that interact with each other affecting plant performance and regulating their establishment. Here, we analyzed how the association with Epichloë endophytes affects belowground colonization by Dark Septate Endophytes (DSE) and arbuscular mycorrhizal fungi (AMF) in the grass Bromus auleticus. Epichloë-symbiotic (E+) and Epichloë-non symbiotic (E−) plants were sampled from a long-term experimental plot and colonization structures were analyzed in the roots. We also examined the influence of Epichloë exudates on the in vitro growth of DSE Microdochium bolleyi isolated from roots. Epichloë symbiosis increased AMF colonization, although differences were not significant. Despite the lack of differences in total DSE colonization, in concordance with in vitro findings, a higher significant abundance of microsclerotia was observed in E+ plants. A negative correlation between total mycorrhizal and DSE was found. Our findings show a more uniform root colonization pattern in E+ plants, suggesting a root symbiosis modulating role.     

Crop mixtures: does niche complementarity hold for belowground resources? An experimental test using rice genotypic pairs

Aims

A growing body of research supports the feasibility of biocrust rehabilitation. Identifying populations of key species that are amenable to cultivation and that are resilient in rehabilitation contexts would advance the efficacy of these technologies. Here we investigate the growth and stress response of the cosmopolitan biocrust moss, Syntrichia ruralis.

Methods

We sampled populations of S. ruralis along a precipitation seasonality gradient from the Colorado Plateau ecoregion of the western United States. We cultivated these populations in an experiment manipulating duration of hydration periods on a weekly cycle. We then treated greenhouse grown materials with brief, stressful watering events, measuring how many events they could survive.

Results

All populations grew at an accelerated rate compared to growth in a natural setting, at least doubling biomass in five months. Increasing duration of hydration periods led to more growth in all but one population. Volunteer biocrust algae and cyanobacteria developed during cultivation, and differed among populations. Greenhouse grown mosses differed in their response to stressful watering, with the most susceptible populations dying at half the number events compared to the most tolerant.

Conclusions

These findings argue for informed selection and deployment of Syntrichia ruralis populations for soil rehabilitation.

     

Response to: Turner,R.E., J.E. Bodker,and C. Schulz. 2017. The belowground intersection of nutrients and buoyancy in a freshwater marsh. Wetlands Ecology & Management: 1–9

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