几种农作物细胞质雄性不育恢复基因的定位和分子标记研究进展

利用杂种优势提高作物产量时, 生产杂交种的主要授粉控制系统是细胞质雄性不育及其恢复系统。在杂交品种的选育过程中, 优良恢复系选育至关重要。为了高效并准确地鉴定选择恢复材料, 同时更深入地研究恢复基因的作用机理, 近年来植物细胞质雄性不育恢复基因分子标记研究受到了广泛重视。本文综述了主要农作物水稻、油菜、小麦、棉花和玉米等细胞质雄性不育类型恢复基因的定位和分子标记研究进展, 并讨论了恢复基因的精确定位和分子标记鉴定在基因克隆和分子标记辅助选择育种中的意义和应用前景。     

主要农作物细胞质雄性不育系育性恢复基因研究进展

提升作物产量、抗逆性和品质的主要手段之一是利用杂种优势,其中细胞质雄性不育/恢复(CMS/Rf)系统是应用最广的雄性不育系统。研究细胞质雄性不育系育性恢复机理是“三系”法选育的重要分子遗传学基础。目前,各个作物已经创制了不同类型的不育系。随着分子技术、基因组学和测序技术的深入,大量育性恢复基因已被定位,且部分已被克隆和功能鉴定。针对主要作物中恢复基因的遗传模式,分子标记定位、克隆及CMS/Rf系统在杂交育种中的应用进行了系统总结。希望本文能为今后恢复系分子标记辅助选育,或利用转基因、基因编辑手段创制新恢复系提供思路。     

植物细胞质雄性不育及其育性恢复的分子基础

植物细胞质雄性不育是广泛存在于高等植物中的现象,其表现为母性遗传、花粉败育,但雌蕊正常。细胞质雄性不育在杂交种子生产中起着重要作用,研究其分子作用机制有利于更有效地利用细胞质雄性不育。随着一些不育基因和恢复基因相继被克隆,人们对一些细胞质雄性不育和恢复系统的分子作用机理已经有一定了解。本文综述了近年来对植物细胞质雄性不育基因和恢复基因作用机理研究的进展。     

植物细胞质雄性不育及其育性恢复的分子基础

植物细胞质雄性不育是广泛存在于高等植物中的现象, 其表现为母性遗传、花粉败育, 但雌蕊正常。细胞质雄性不育在杂交种子生产中起着重要作用, 研究其分子作用机制有利于更有效地利用细胞质雄性不育。随着一些不育基因和恢复基因相继被克隆, 人们对一些细胞质雄性不育和恢复系统的分子作用机理已经有一定了解。本文综述了近年来对植物细胞质雄性不育基因和恢复基因作用机理研究的进展。     

植物雄性不育基因的研究进展

本文概述了植物雄性核不育基因的分子标记及其定位,综述了植物细胞质雄性不育中不育系与保持系在叶绿体和线粒体基因组的结构、转录和翻译产物方面的差异以及和雄性不育之间的可能关系,以及恢复系中的恢复基因分子水平的研究现状;讨论了环境条件光周期和温度对雄性不育的影响在分子水平上的研究现状,指出了植物雄性不育基因研究方面存在的问题和解决贩思路。     

植物雄性不育基因的研究进展

本文概述了植物雄性核不育基因的分子标记及其定位,综述了植物细胞质雄性不育中不育系与保持系在叶绿体和线粒体基因组的结构、转录和翻译产物方面的差异以及和雄性不育之间的可能关系,以及恢复系中的恢复基因分子水平的研究现状;讨论了环境条件如光周期和温度对雄性不育的影响在分子水平上的研究现状,指出了植物雄性不育基因研究方面存在的问题和解决的思路。     

植物细胞质雄性不育及育性恢复研究进展

植物细胞质雄性不育是一种广泛存在于高等植物中的母性遗传性状。细胞质雄性不育不仅为研究核质互作提供了良好材料,同时也是植物杂种优势利用的重要基础,其分子机理是目前研究的重点。多种研究证据表明,线粒体基因与细胞质雄性不育密切相关。随着分子生物学和分子遗传学的不断发展,许多植物的恢复基因已经被定位和克隆,进一步阐明了植物细胞质雄性不育和育性恢复的分子机理。本文综述了近几年植物中细胞质雄性不育和育性恢复相关基因的研究进展,并探讨了细胞质雄性不育/育性恢复系统在育种方面的应用。     

植物细胞质雄性不育及其育性恢复的分子生物学研究进展

植物细胞质雄性不育（CMS）和恢复系统在作物杂交种子生产中具有重要的意义。综述了目前已发现的与植物CMS相关的线粒体DNA位点,育性恢复基因对CMS相关DNA位点表达的影响,育性恢复基因的分子标记定位、克隆,及育性恢复分子机理等方面的研究进展,并讨论了恢复基因在植物分子育种上的应用。     

与油菜细胞质雄性不育相关的DNA位点和育性恢复基因的研究进展

细胞质雄性不育(cytoplasmic male sterility,CMS)在油菜杂交种子生产中具有重要的意义.文章主要从目前已发现的与油菜CMS相关的线粒体DNA位点,育性恢复基因对CMS相关DNA位点表达的影响,育性恢复基因的分子标记定位和育性恢复基因的克隆4个方面综述了近年来油菜CMS的研究进展.并就该领域今后的研究方向进行了探讨.     

植物细胞质雄性不育性与育性恢复的分子生物学研究进展

植物细胞质雄性不育性与育性恢复的分子机理一直是分子生物学的研究热点。文章综述了近十年来的主要研究进展。包括：1、线粒体不育相关区域的确定及其特点;2、不育相关区域的表达谱;3、产生细胞质雄性不育的可能机理;4、恢复基因的可能调控方式;5、恢复基因的遗传、定位及其特征等。拟兰芥、水稻等模式植物线粒体基因组测序工作已经完成,其有关生物学信息及后续研究将极大地推动植物细胞质雄性不育研究取得更快进展。     

植物CMS/Rf系统的基因克隆及其结构特征

细胞质雄性不育和恢复系统（CMS/Rf）在植物杂种优势利用中已被广泛应用。为阐明恢复基因在这一系统中的作用机理,众多研究者开展了恢复基因的定位和克隆研究。近年来,4个植物恢复基因的成功克隆有力地推动了这一研究领域的发展。本文综述了植物恢复基因的定位、克隆以及育性恢复分子机理的研究进展,并讨论了恢复基因在植物分子育种上的应用。     

Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice

Commercial exploitation of heterosis is essential for enhancing productivity of rice. The use of cytoplasmic male sterility (CMS) and fertility restoration system greatly facilitates large scale production of hybrid seed. The wild abortive (WA) cytoplasm is most widely used for hybrid seed production in rice. The present study was undertaken to develop molecular markers for both WA cytoplasm based male sterility and its fertility restoration for use in efficient hybrid breeding. High degree of genetic differentiation of WA-cytoplasm from its normal fertile counterpart was observed due to DNA rearrangements involving five (coxI, coxIII, cob, atp6 and rps3) mitochondrial genes. Cleaved amplified polymorphic sequence (CAPS) markers based on five mitochondrial genes namely, coxIII, cob, atp9, rps3 and 18SrRNA polymorphic between CMS and maintainer line were developed. The utility of these informative markers was demonstrated in purity testing of the CMS line Pusa6A being used in commercial hybrid seed production. Fertility restoration was found to be controlled by a major locus in the Basmati restorer line PRR78, which was mapped to a short marker interval of 0.8 cM and a physical interval of 163.6 kb on rice chromosome 10. A total of 13 pentatricopeptide repeat (PPR) motif containing genes were predicted in a 1.66 Mb region on the long-arm of this chromosome of which, four were present in the marker interval containing the fertility restorer gene. High degree of conservation of gene order was observed between japonica and indica for the predicted PPR genes. A sequence tagged site (STS) and a genic non-coding microsatellite (GNMS) marker were designed based on one of the candidate PPR motif containing genes present in the marker interval, which were validated using F₂ population and other known restorer lines. The candidate gene based marker identified in the present study would be useful in marker assisted selection (MAS) for fertility restorer gene in hybrid breeding programme based on WA-CMS of rice.     

Molecular mapping and inheritance of restoration of fertility (<Emphasis Type="Italic">Rf</Emphasis>) in A4 hybrid system in pigeonpea (<Emphasis Type="Italic">Cajanus cajan</Emphasis> (L.) Millsp.)

Key message

We report molecular mapping and inheritance of restoration of fertility (Rf) in A4 hybrid system in pigeonpea. We have also developed PCR-based markers amenable to low-cost genotyping to identify fertility restorer lines.

Abstract

Commercial hybrids in pigeonpea are based on A4 cytoplasmic male sterility (CMS) system, and their fertility restoration is one of the key prerequisites for breeding. In this context, an effort has been made to understand the genetics and identify quantitative trait loci (QTL) associated with restoration of fertility (Rf). One F₂ population was developed by crossing CMS line (ICPA 2039) with fertility restorer line (ICPL 87119). Genetic analysis has shown involvement of two dominant genes in regulation of restoration of fertility. In parallel, the genotyping-by-sequencing (GBS) approach has generated ~?33 Gb data on the F₂ population. GBS data have provided 2457 single nucleotide polymorphism (SNPs) segregating across the mapping population. Based on these genotyping data, a genetic map has been developed with 306 SNPs covering a total length 981.9 cM. Further QTL analysis has provided the region flanked by S8_7664779 and S8_6474381 on CcLG08 harboured major QTL explained up to 28.5% phenotypic variation. Subsequently, sequence information within the major QTLs was compared between the maintainer and the restorer lines. From this sequence information, we have developed two PCR-based markers for identification of restorer lines from non-restorer lines and validated them on parental lines of hybrids as well as on another F₂ mapping population. The results obtained in this study are expected to enhance the efficiency of selection for the identification of restorer lines in hybrid breeding and may reduce traditional time-consuming phenotyping activities.

     

Introgression and molecular tagging of <Emphasis Type="Italic">Rf</Emphasis><Subscript>4</Subscript>, a new male fertility restoration gene from wild sunflower <Emphasis Type="Italic">Helianthus maximiliani</Emphasis> L.

Cytoplasmic male sterility (CMS) and its fertility restoration (Rf) genes are critical tools for hybrid seed production to utilize heterosis. In sunflower, CMS PET1 and the associated Rf gene Rf (1) is the only source extensively used in commercial hybrid production. The objective of this research was to develop new sources of CMS and fertility restorers to broaden the genetic diversity of hybrid seed production. We identified a new type of CMS, named as CMS GIG2, from an interspecific cross between Helianthus giganteus accession1934 and H. annuus cv. HA 89. Based on reactions to a set of standard Rf testers, CMS GIG2 is different from all previously reported CMS types, including the CMS GIG1 from another H. giganteus accession. We also identified an Rf gene for CMS GIG2 from wild species H. maximiliani accession 1631. The CMS GIG2 and its restoration gene were introduced into HA 89 background through recurrent backcross and single plant selection techniques. Genetic analysis revealed that the CMS GIG2-Rf system is controlled by a completely dominant gene, named as Rf (4), and the gene additive and dominance effects were estimated as 39.9 and 42.2%, respectively, in the HA 89 background. The gene Rf (4) was mapped onto linkage group 3 with simple sequence repeat (SSR) markers and RFLP-derived STS-marker, and is about 0.9 cM away from the SSR marker ORS1114 based on a segregation population of 933 individuals. The CMS GIG2-Rf (4) system tagged by molecular markers provides an alternative genetic source for hybrid breeding in the sunflower crop.     

Mapping of the Rf-3 nuclear fertility-restoring gene for WA cytoplasmic male sterility in rice using RAPD and RFLP markers

The cytoplasmic male sterility (CMS) of wild-abortive (WA) cytoplasm has been widely used for breeding hybrid rice. Two restorer genes for the CMS have been found by traditional genetic analysis. To tag the restorer genes we used a set of near-isogenic lines (NILs) of Zhenshan 97 carrying different genotypes for fertility restoration from IR24, to perform RAPD analysis. From the survey of 720 random primers, six RAPD markers were identified to be associated with Rf-3. Three of these OPK05-800, OPU10-1100 and OPW01-350, were mapped on chromosome 1. Two populations from the crosses between Zhenshan 97 A and a near-isogenic restorer line ZSR21 and between Zhenshan 97 A and IR24 were used for mapping Rf-3. The three RAPD markers and three RFLP markers, RG532, RG140 and RG458, were found to be closely linked to Rf-3 in the two populations. The same location of Rf-3 was also found in a population from the cross of IR58025 A//IR36/IR58025 B. At the RG532 locus, different alleles were found between two CMS lines, Zhenshan 97 A and IR58025 A, and between two restorer lines, IR24 and IR36. The use of these molecular markers closely linked to Rf-3 in facilitating the development of hybrid rice is discussed. Received: 3 January 1996 / Accepted: 17 May 1996     

Development of PCR-based markers linked to dominant genes for male-fertility restoration in Pampa CMS of rye (<Emphasis Type="Italic">Secale cereale</Emphasis> L.)

Cytoplasmatic male sterility (CMS) is the basis for commercial hybrid seed production of rye. Nuclear restorer genes are indispensable for a complete restoration of fertility of the CMS lines. The drawbacks of current European restorer lines require the utilisation of new genetic resources that have been recently detected in an Iranian primitive rye population (IRAN IX) and an Argentinean landrace (Pico Gentario). The introgression of these effective restorer genes (Rfp1 and Rfp2, respectively) into breeding material can be facilitated by marker-assisted selection. Using two F(2) populations based on crosses between the non-restorer inbred line Lo6 and the restorer IRAN IX, as well as Pico Gentario, RAPDs and AFLPs were screened and led to a closely linked marker set for each of these genes. The conversion of the closest markers into fragment-specific sequence-characterised amplified region (SCAR) markers resulted in flanking ranges of 2.9 cM (Rfp1) and 5.2 cM (Rfp2). The application of these markers in backcross programmes is discussed.