Particulate organic matter in a mountain stream in the south-western Cape,South Africa

The quality and quantity of allochthonous inputs and of benthic organic matter were investigated in a second-order, perennial mountain stream in the south-west Cape, South Africa, between April 1983 and January 1986. Although the endemic, riparian vegetation is sclerophyllous, low and evergreen, inputs of allochthonous detritus to the stream (434 to 500 g m^–2y^–1) were similar to those recorded for riparian communities worldwide, as were calorific values of these inputs (9548 to 10 032 KJ m^–2y^–1). Leaf fall of the riparian vegetation is seasonal, occurring in spring (November) as discharge decreases, resulting in retention of benthic organic matter (BOM) on the stream bed during summer and early autumn (maximum 224 g m^–2). Early winter rains (May) scoured the stream almost clean of benthic detritus (winter minimum 8 g m^–2). Therefore, BOM was predictably plentiful for about half of each year and predictably scarce for the other half. Coarse BOM (CBOM) and fine BOM (FBOM) constituted 46–64% of BOM standing stock, ultra-fine BOM (UBOM) 16–33% and leaf packs 13–24%. The mean annual calorific value of total BOM standing stock was 1709 KJ m^–2. Both standing stocks and total calorific values of BOM were lower than those reported for streams in other biogeographical regions. Values of C:N ratios decreased with decrease in BOM particle size (CBOM 27–100; FBOM 25–27; UBOM 13–19) with no seasonal trends. The stream is erosive with a poor ability to retain organic detritus. Its character appears to be dictated by abiotic factors, the most important of which is winter spates.     

The negative impacts of fire on the resurrection ecology of invertebrates from temporary wetlands in Cape Flats Sand Fynbos in the Western Cape,South Africa

Fire is an important environmental disturbance in Mediterranean‐climate regions; however, its intensity and frequency are predicted to increase under climate change scenarios with unknown implications for ecosystems in these regions. Temporary wetlands, with their periodic wet and dry phases, are considered one of the most productive systems in the world and their invertebrate communities form a crucial diet component for higher trophic levels. The effect of fire on the hatching success of invertebrate propagules from temporary wetlands in the Cape Flats Sand Fynbos (Cape Town, South Africa) was investigated. Homogenised soil samples from these wetlands were either experimentally subjected to vegetation fires (treatment samples) or were left as is (control samples). The results revealed that fire had a significant negative impact on invertebrate hatching success, as revealed by analyses of the different diversity measures (e.g. taxon richness, Shannon diversity and Pielou's evenness) and community composition. Proper management of fire, especially in the Mediterranean‐climate regions, which replicates the natural fire intervals typical of the area (10–15 years) and avoids unregulated or accidental fires, is essential to ensuring future protection of these critical biodiversity hotspots created by the temporary wetlands.     

Diatoms as water quality indicators in the upper reaches of the Great Fish River,Eastern Cape,South Africa

This study focused on the spring-fed upper reaches of the economically important Great Fish River with the aim of determining if diatoms could be used for biomonitoring in semi-arid conditions in southern Africa. Five sites were monitored monthly from 2010 to 2012. Of the 269 diatom taxa belonging to 51 genera identified, the dominant taxa were mostly those considered to be pollution-tolerant: Amphora pediculus, Craticula buderi, Fragilaria biceps, Nitzschia frustulum, Nitzschia paleacea, Planothidium lanceolatum and Rhopalodia gibba. A number of diatom-based numerical indices were used to infer water quality, including the generic diatom index, the specific pollution sensitivity index, the biological diatom index, and percentage pollution-tolerant valves, which forms part of the UK trophic diatom index. All index scores showed the Great Fish River to be impacted, and showed significant correlations of diatom species abundance with pH, NO₃-N, electrical conductivity, NH4-N and CaCO_3. Analysis revealed EC and NO3-N as the main environmental drivers affecting diatom community composition, followed by pH and PO4-P. The percentage of diatom deformities at all sites was high, at 3.5%. Diatom indices showed the river to be impacted by decades of agricultural activity, which was confirmed by chemical water analysis. Thus diatom indices can be used for biomonitoring in semi-arid areas.     

An assessment of macroinvertebrate functional feeding groups as water quality indicators in the Buffalo River, eastern Cape Province, South Africa

The aim of this paper was to investigate the potential for using functional feeding groups (FFGs) as indicators of water quality conditions in rivers, using the Buffalo River, South Africa, as a specific example. Multivariate classification and ordination techniques were used to investigate species and FFG distributions in relation to a number of physico-chemical variables at 16 sites from the headwaters to the estuary of the Buffalo River.Two-way indicator species analysis (TWINSPAN) of species composition ranked most of the sites sequentially down the river, irrespective of water quality conditions. Ordination of FFGs from a set of riffle samples collected in mid-late summer showed only weak relationships between FFG distribution and water quality changes, except where variables changed sequentially down the river (e.g. pH and temperature). Individual species responses to water quality gradients were examined for nine riffle-dwelling species representing diverse FFGs. Following correspondence analysis of a matrix of environmental variables and species frequencies, some species showed strong associations with defined ranges of some variables. In particular, Adenophlebia auriculata (Leptophlebiidae, Ephemeroptera) from the headwater sampling site, was associated with low pH and low temperature. Simulium damnosum occurred under conditions of high turbidity, while Afronurus harrisoni was found under high concentrations of potassium, ammonium and nitrite ions.We conclude that although there was a distinct headwaters fauna in the Buffalo River, and sequential downstream changes in species composition, most FFGs (apart from shredders) were represented down the whole length of the river. FFG classifications are therefore unlikely to provide useful indications of water quality conditions in the Buffalo River.Using a categorical approach to classifying water quality variables, and by applying correspondence analysis to the resulting matrix, we recognised nine species that could be used to define water quality. These indicator species can be used to define tolerance ranges of the fauna for water quality conditions in different parts of the Buffalo river.     

Mesozoic palaeogeography of the Southern Cape,South Africa

Four palaeogeographical reconstructions are presented for the southern Cape covering the period Late Permian to Late Cretaceous. This time spans the commencement to an advanced stage of breakup of Gondwanaland, during which the area moved from a mid-continental, high latitude, to an ocean-dominated, middle latitude position. These movements can be traced in facies changes and erosional cycles associated with the rift between West Gondwana and Antarctica (proto southwest Indian Ocean) and the later rift between South America and Africa (proto southeast Atlantic Ocean).     

Geographical affinities of the Cape flora, South Africa

Aim The flora characteristic of the Cape Floristic Region (CFR) is dominated by a relatively small number of clades that have been proposed as ‘Cape clades’. These clades have variously been suggested to have African or Austral affinities. Here we evaluate the support for these conflicting hypotheses. In addition, we test the hypothesis that these clades share a common time of differentiation from their geographical neighbours. Location The Cape Floristic Region, South Africa Methods We use both published and unpublished phylogenetic information to investigate the geographical sister areas of the Cape clades as well as the timing and the direction of biogeographical disjunctions. Results Almost half of the Cape clades for which unambiguous sister areas could be established show a trans‐Indian Ocean disjunction. The earliest trans‐Indian Ocean disjunction dates from 80 Ma. Other disjunctions date from various times in the Cenozoic, and we suggest that the process of recruiting lineages into the Cape flora might be ongoing. Relatively few Cape clades show a sister relationship with South America and tropical Africa, despite their relative geographical proximity. Numerous Cape clades contain species also found on tropical African mountains; in all cases tested, these species are shown to be embedded within the Cape clades. While many Cape clades show a relationship with the Eurasian temperate flora, this is complicated by their presence in tropical Africa. The single case study addressing this to date suggests that the Cape clade is nested within a European grade. Main conclusions Although many Cape clades show Austral rather than African relationships, there are numerous other patterns suggestive of a cosmopolitan flora. This spatial variation is echoed in the temporal data, from which, although there is wide variance around the dates of disjunctions, it is clear the Cape flora has been assembled over a long time period. There is no simple hypothesis that can account for the geographical sources of the currently distinctive Cape flora. The phylogenetic positions of Afromontane members of Cape clades suggest a history of dispersal from the CFR, rather than the reverse.     

Determining discharges from the Table Mountain Group (TMG) aquifer to wetlands in the Southern Cape, South Africa

The focus of this study was to determine whether coastal wetlands in lowland settings could be dependent on groundwater from the deep circulating confined Table Mountain Group (TMG) aquifer. Groundwater interactions with wetlands are normally perceived to be limited to primary aquifers. A comparative study was done between two endorheic coastal wetlands in the southern Cape. Earlier reports stated that these groundwater dependent wetlands were fed by discharges from the fixed dunes surrounding them. On the basis of a three-dimensional electrical conductivity (EC) interpolation for Groenvlei, a hydrological link between the TMG aquifer and Groenvlei and Van Kervelsvlei was investigated by measuring water level and quality of groundwater and surface water. Water quality parameters used were EC, pH, Na⁺, Fe²⁺ and Cl⁻. The results from this, and an accompanying study, on the basis of water quality and plant nutrient cycling assessments, indicated direct groundwater discharges from the TMG to at least Van Kervelsvlei, with Groenvlei receiving secondary discharges from the TMG via Van Kervelslvlei. These findings significantly affect the current knowledge on which water balance models are based for the determination of groundwater availability for the area. Handling editor: D. Hamilton The first author did the research as part of his PhD in the Department of Earth Sciences of the University of the Western Cape, Bellville, South Africa. Funding is quoted under acknowledgements.     

Raptor conservation in the Northern Cape Province,South Africa

Anderson, M.D. 2000. Raptor conservation in the Northern Cape Province, South Africa. Ostrich 71 (1 & 2): 25–32.

The semi-arid Northern Cape is the largest and most sparsely populated province in South Africa. One of the main economic activities is sheep farming, and the properties are generally very large (>5 000 ha). A heterogeneous environment results in many habitats for a wide diversity of raptors. Fifty-one different species have been recorded, of which 37 are resident, 21 are common, and eight species are listed in the South African Red Data Book—Birds. As habitat degradation is limited, besides the areas immediately adjacent to the perennial rivers, raptors are still commonly encountered in many areas. Conflict with small-stock farming, however, results in some birds being inadvertently or directly persecuted each year. Two farmer questionnaire postal surveys (1976 and 1992) indicated a decrease in range and abundance of certain scavenging species, such as the Tawny Eagle. The more recent survey also indicated that most stock mortalities occurred in the mountainous areas, with the Black Eagle being the apparent culprit. In the Northern Cape there are both positive and negative anthropogenic effects on raptors. For example, 14 species have been recorded breeding on man-made structures, while 18 species have been documented to drown in farm reservoirs. Through the activities of the Raptor Conservation Group, the Northern Cape Nature Conservation Service and the Northern Cape Raptor Conservation Forum various threats are being addressed. Raptor conservation activities include: monitoring of raptor breeding populations, road censuses, farmer extension, establishment of raptor conservancies, rehabilitation of injured raptors, issuing of certificates to land-owners who have breeding raptors on their properties, presentation of the annual Gariep Raptor Conservationist Award, production and distribution of raptor pamphlets and booklets, modification of farm reservoirs to prevent raptor drownings, modification of powerlines to prevent electrocutions, and establishment of “vulture restaurants”. Through these efforts, the status of many raptor species is improving and species such as the Bateleur and Lappet-faced Vulture are becoming increasingly common.     

Seed storage and germination in Kumara plicatilis,a tree aloe endemic to mountain fynbos in the Boland,south-western Cape,South Africa

Seed storage under appropriate conditions is a relatively inexpensive means of safeguarding plant genetic material for ex situ conservation. Post-storage germination trials are used to determine the viability of stored seeds, and hence the efficacy of the particular storage treatment. Kumara plicatilis (= Aloe plicatilis) is a tree aloe endemic to mountain fynbos in the Boland, south-western Cape. The viability and germination behaviour of K. plicatilis seeds were assessed for seeds stored for four and nine months at − 80 °C, 4 °C, 25 °C and under ambient conditions in a laboratory. Seeds were germinated under controlled conditions and germination rates and percentages determined. Ungerminated seeds were tested for viability using tetrazolium salt. Seed viability was not significantly reduced during storage. Seeds stored at − 80 °C for four and nine months exhibited the fastest germination rate overall (both 5.9 ± 0.3 weeks, mean ± S.E.), and slowest was for seeds stored under ambient conditions for four and nine months (both 7.8 ± 0.4 weeks). All seed lots showed similar percentage germination after four months of storage (78.0–90.4%). The highest percentage germination overall was for seeds stored at − 80 °C for four months (90.4%) and the lowest was for seeds kept at 4 °C and − 80 °C for nine months (39.2 and 39.6%, respectively). Respective percentage viability for ungerminated seeds in these two treatments was 82% and 87%, respectively, indicating the induction of secondary dormancy. Induced dormancy triggered by protracted cold temperatures may be an adaptation that enables seeds to survive prolonged extreme conditions that are unfavourable for germination. Further research on the long-term storage of aloe seeds would be beneficial for developing long-term seed storage and germination testing protocols for ex situ conservation.     

Comparative molecular phylogeography of two Xenopus species, X. gilli and X. laevis, in the south-western Cape Province, South Africa

Xenopus gilli is a vulnerable anuran with a patchy distribution along the south-western coast of the Cape Province, South Africa. This species is sympatric with Xenopus laevis laevis , a widespread relative found over much of southern Africa. We examined the molecular phylogeography and population structure of the contact zone between these species to obtain information about historical biogeography and conservation management of this region. Analyses of the distribution, frequency, and cladistic and phenetic relationships among mitochondrial DNA haplotypes indicate that population subdivision is present in both taxa but that long-term isolation of sets of populations has occurred in X. gilli only. Haplotype and nucleotide diversity are also considerably higher within and among X. gilli ponds than X. l. laevis ponds in this region. We attribute the genetic segregation of X. gilli populations to ancient habitat fragmentation by ocean transgression into X. gilli habitat and to continued habitat alteration by human activity. The lower level of genetic diversity in X. l. laevis in this region is likely a result of a recent arrival of this taxon to the south-western Cape region relative to X. gilli . Population structure in X. l. laevis may be a result of isolation by distance. Clear evidence exists for at least two management units within X. gilli and strongly supports the establishment of protective measures east of False Bay in order to conserve a substantial portion of this species' extant genetic diversity.     

Floristic diversity in the Cape Flora of South Africa

Comprising a land area of ca 90000 km2, less than 4% of the total land area for the Southern African subcontinent, the Cape Floristic Province is one of the world's richest areas in terms of botanical diversity for its size. An estimated 8650 species of vascular plants occur in this area, about 65% of which are endemic. This is about 42% of the estimated total for all of southern Africa. The number of species packed into so small an area is remarkable for the temperate zone, and compares closely with species totals for areas of comparable size in the wet tropics. The Cape Region consists of a mosaic of sandstone and shale substrates that give rise to soils of quite different types, and in addition local areas of limestone add to the edaphic diversity. Climates across the region are extremely variable, and the predominant orographic rainfall pattern ranges from 2000mm locally to less than 100mm, often with extremely steep gradients, the result of a mountainous landscape. The edaphic diversity resulting from a mosaic of different soils is compounded by sharp local gradients in precipitation that creates an unusual number of local habitats. A feature of the some of the soils in the Region is low nutrient levels and many of the plants on such soils have low seed dispersal capabilities, a factor important in explaining the high levels of local endemism. Species richness in the Cape Region is hypothesized to have resulted from the presence of a complex mosaic of diverse habitats and steep ecological gradients against a background of relatively stable climate and geology after the mediterranean climate was established there sometime after the beginning of the Pliocene. A local or ecological mode of speciation may have been more important under these conditions than allopatric speciation.     

Nest boxes for Cape Parrots Poicephalus robustus in the Hogsback area,Eastern Cape,South Africa

Breeding propensity of tree-cavity nesting bird species are often limited by a shortage of natural nesting sites. Artificial nests can be used to provide alternative nest sites. Cape Parrots Poicephalus robustus are nationally endangered and nest in existing tree-cavities in high-altitude fragmented Afromontane forests in South Africa, assumed to be in short supply due to historic and current logging practices. To increase nest site availability, 179 wooden bird boxes and 28 bee boxes (to ‘pull’ bees) were erected during 2011–2012 in Hogsback, Eastern Cape. In 2016, no bird boxes were occupied by Cape Parrots. A total of 43% were used by other species, 51% were unused and 6% could not be inspected due to tree instability and inaccessibility. Two bird boxes were inspected by two pairs of Cape Parrots, but were never occupied. Occupancy of boxes by birds was not associated with nest, tree or habitat characteristics. However, occupancy of boxes by bees was associated with habitat type and tree species. Future conservation efforts will include locating natural Cape Parrot nesting sites and reforestation efforts to ensure the long-term availability of natural nesting sites.     

Exploring patterns of population subdivision in the net-winged midge, Elporia barnardi (Diptera: Blephariceridae), in mountain streams of the south-western Cape, South Africa

1. The net-winged midges (Diptera: Blephariceridae) are a highly specialized group whose morphological characteristics and specific habitat requirements suggest a limited potential for dispersal. Levels of genetic variation were examined within streams, between streams in the same range and between mountain ranges in larval populations of Elporia barnardi in the south-western Cape of South Africa. The aim was to examine the hypothesis that population structure would reflect the poor potential for dispersal.
2. Significant deviations from Hardy–Weinberg equilibrium in 17 of the 57 individual comparisons indicate a non-random mating population. Given the swarming behaviour and life history traits, larvae sampled may reflect the product of limited matings.
3. Analysis of population substructuring revealed significant levels of differentiation among geographically proximate populations. Large differences between streams within Table Mountain, similar in magnitude to those between mountain ranges, suggest that movement of individuals out of the stream catchment is rare. Observed F _ST values are more similar to those of fully aquatic species than other lotic insects with winged adult stages.
4. Results suggest that mountain ridges provided effective physical barriers to the dispersal of E. barnardi , with the catchment representing the effective population unit.     

The Griqua of Campbell, Cape Provice, South Africa.

The Griqua of Campbell in the Cape Province of South Africa are reputed to be descended from an amalgam of Khoi ("Hottentots") with various Caucasoid, Negroid and East Asian elements at the Cape of Good Hope. A stormy history of migration and deprivation has left this small residuum on the edge of the Kalahari Desert. It was hoped that a sero-genetic study of these people, who proudly preserve their identity, might provide further insights into the genetic consitution of their Khoi forebears. Despite the retention of the language of their own, an social mores distinct from of other Mixed populations, they have been shown, however, to have received an appreciable inflow of non-Khoisan genes. This has probably resulted from social factors such as the prestige attaching to Griqua membership and the willingness of the Griqua to assimilate outsiders, combined with the tendency of Campbell Griqua to migrate elsewhere. There are no significant differences between "Griqua" members of the population and those who are not recognized as "Griqua."     

Macroinvertebrates as indicators of fish absence in naturally fishless lakes

1. Little is known about native communities in naturally fishless lakes in eastern North America, a region where fish stocking has led to a decline in these habitats. 2. Our study objectives were to: (i) characterise and compare macroinvertebrate communities in fishless lakes found in two biophysical regions of Maine (U.S.A.): kettle lakes in the eastern lowlands and foothills and headwater lakes in the central and western mountains; (ii) identify unique attributes of fishless lake macroinvertebrate communities compared to lakes with fish and (iii) develop a method to efficiently identify fishless lakes when thorough fish surveys are not possible. 3. We quantified macroinvertebrate community structure in the two physiographic fishless lake types (n = 8 kettle lakes; n = 8 headwater lakes) with submerged light traps and sweep nets. We also compared fishless lake macroinvertebrate communities to those in fish‐containing lakes (n = 18) of similar size, location and maximum depth. We used non‐metric multidimensional scaling to assess differences in community structure and t‐tests for taxon‐specific comparisons between lakes. 4. Few differences in macroinvertebrate communities between the two physiographic fishless lake types were apparent. Fishless and fish‐containing lakes had numerous differences in macroinvertebrate community structure, abundance, taxonomic composition and species richness. Fish presence or absence was a stronger determinant of community structure in our study than differences in physical conditions relating to lake origin and physiography. 5. Communities in fishless lakes were more speciose and abundant than in fish‐containing lakes, especially taxa that are large, active and free‐swimming. Families differing in abundance and taxonomic composition included Notonectidae, Corixidae, Gyrinidae, Dytiscidae, Aeshnidae, Libellulidae and Chaoboridae. 6. We identified six taxa unique to fishless lakes that are robust indicators of fish absence: Graphoderus liberus, Hesperocorixa spp., Dineutus spp., Chaoborus americanus, Notonecta insulata and Callicorixa spp. These taxa are collected most effectively with submerged light traps. 7. Naturally fishless lakes warrant conservation, because they provide habitat for a unique suite of organisms that thrive in the absence of fish predation.