Resonance Raman scattering of bacteriochlorophyll, bacteriopheophytin and spheroidene in reaction centers of Rhodopseudomonas speroides.

We report and discuss Raman spectra of bacteriochlorophyll $\text{a}$ and of bacteriopheophytin $\text{a}$ obtained $\text{in vitro}$ by resonance effect in their Q_X and Soret electronic bands. Selective excitation of spectra of either of these molecules in reaction centers of $\text{Rhodopseudomonas spheroides}$, strains Y and R 26, was achieved by illumination in their respective Q_X bands. Preliminary interpretation of the spectra yields information about the interactions assumed by these molecules in the reaction centers. Spheroidene bound to reaction centers of strain Y probably affects a conformation different from that assumed by the bulk spheroidene of the chromatophore.     

Orientation of chromophores in reaction centers of Rhodopseudomonas sphaeroides: A photoselection study

The relative orientation of the pigments of reaction centers from Rhodopseudomonas sphaeroides has been studied by the photoselection technique.A high value (+0.45) of $\text{p =}\text{(ΔA}{}_{\mathrm{<mtext>V</mtext>}}\text{? ΔA}{}_{\mathrm{<mtext>H</mtext>}}\text{)}\text{(ΔA}{}_{\mathrm{<mtext>V</mtext>}}\text{+ ΔA}{}_{\mathrm{<mtext>H</mtext>}}$) is obtained when exciting and observing within the 870 nm band which is contradictory to the results of Mar and Gingras (Mar, T. and Gingras, G. (1976) Biochim. Biophys. Acta 440, 609–621) and Shuvalov et al. (Shuvalov, V.A., Asadov, A.A. and Krakhmaleva, I.N. (1977) FEBS Lett. 76, 240–245). It is shown that the low values of p obtained by both groups were erroneous due to excitation conditions.Analysis of the polarization of light-induced changes when exciting with polarized light in single transitions (spheroiden band and bacteriopheophytin Q_x bands) enable us to propose a possible arrangement of the pigments within the reaction center. It is concluded that the 870 nm band corresponds to a single transition and is one of the two bands of the primary electron donor (P-870). The second band of the bacteriochlorophyll dimer is centred at 805 nm. The Q_y transitions of the molecules constituting the bacteriochlorophyll dimer are nearly parallel (angle less than 25°).The two bacteriopheophytin molecules present slightly different absorption spectra in the near infra-red. Both bacteriopheophytin absorption bands are subject to a small shift under illumination. The angle between the Q_y bacteriopheophytin transitions is 55° or 125°. Both Q_y transitions are nearly perpendicular to the 870 nm absorption band. Finally, the carotenoid molecules makes an angle greater than 70° with the 870 nm band and the other bacteriochlorophyll molecules.     

Circular dichroism study of 2'-5' dinucleoside monophosphates modified with N-2-acetylaminofluorene.

The conformational properties of four 2′ – 5′ dinucleoside monophosphates modified with $\text{N}$-2-acetylaminofluorene have been studied by circular dichroism spectroscopy. Covalent binding of this chemical carcinogen at the C₈ position of guanosine in the 2′ – 5′ dinucleoside monophosphates induces striking changes in their circular dichroic spectra depending on their base sequence and composition. The changes in CD spectra, redshift of the extrema and change of their polarity, not observed in the spectra of corresponding 3′ – 5′ derivatives modified with $\text{N}$-2-acetylaminofluorene are correlated with the difference in the configuration of 2′ – 5′ and 3′ – 5′ dinucleoside monophosphates and discussed in respect to the intramolecular stacking interactions.     

Circular dichroism spectra of bradykinin analogs containing β-homoamino acids

The CD spectra of β-homoprolyl⁷-bradykinin (βHProB) and β-homophenylalanyl⁸-bradykinin (βHPheB) were compared to those of bradykinin. The spectra were analyzed in terms of models that have been proposed for the solution conformation of bradykinin. Cann $\text{et al}$. (1) proposed 3 → 1 hydrogen-bonding across Pro³, Pro⁷ and Phe⁸ in bradykinin, as shown by a 234 nm trough in the CD. The extra CH₂ groups in the chains of the two bradykinin analogs would be expected to facilitate the proposed hydrogen-bonding, but in the case of βHProB the 234 nm trough is eliminated, and is reduced in magnitude for βHPheB. Ivanov $\text{et al}$. (2) proposed a cyclic conformation for bradykinin, stabilized by ionic attraction between the side-chain of Arg¹ and the carboxylate terminal. The extra CH₂ groups of these two analogs would be expected to increase the stability of such a conformation, and there was some evidence that the ionic effects on the CD spectra of the two analogs were different from those on the bradykinin spectra. Alternatively, the effects could be attributed to cis-trans isomerizations around the prolyl peptide bonds.     

Glutathione peroxidase activity of glutathione-s-transferases purified from rat liver.

$\text{Rhizobium}$ hemeproteins P-450$\text{a, b}$, and $\text{c}$ cross react with antibodies to P-450_CAM and P-450_LM-2. Anti P-450_CAM IgG and phenobarbital, each bound to Sepharose 4B, were effective in purification of $\text{Rhizobium}$ P-450$\text{c}$; the latter was more convenient. The amino acid composition of highly purified $\text{Rhizobium}$ P-450$\text{c}$ resembles the compositions of P-450_CAM and P-450_LM-2. These results suggest that P-450 heme proteins of unrelated substrate specificities may nevertheless contain similar structural features.     

Thyroid hormone structure: molecular conformation of 3'-isopropyl-3,5-diiodo-L-thyronine, the most potent known thyromimetic agent

The three-dimensional structure of the potent thyromimetic agent 3′-isopropyl- 3,5-diiodo-L-thyronine (iPr-T₂) has been established by x-ray diffraction of single crystals of iPr-T₂ hydrochloride. The molecular conformation is such that the β-ring 3′-isopropyl group is oriented in space $\text{proximal}$ to the 3,5-diiodotyrosine α-ring, similar to the conformation adopted in the crystal structure of 3,5,3′-triiodo-L-thyronine.     

Localization of the structural gene for the ' subunit of RNA polymerase in Escherichia coli

A minicell-producing strain of $\text{E.}$$\text{coli}$ carrying an F′ factor, KLF10-1, forms minicells that contain plasmid but not chromosomal DNA. These minicells were found to synthesize two polypeptides corresponding precisely to the β and β′ subunits of RNA polymerase in SDS-polyacrylamide gel electrophoresis. In contrast, minicells obtained from an isogenic strain carrying F13-1 do not synthesize these proteins under similar conditions. These results indicate that the structural genes for the β′ as well as β subunits of the polymerase are located on the chromosomal segment (78 to 81 min on the standard genetic map of $\text{E.}$$\text{coli}$) carried by KLF10-1.     

Delineation of the intimate details of the backbone conformation of pyridine nucleotide coenzymes in aqueous solution.

The noise free 300 MHz ¹H NMR spectra of β-DPN⁺, recorded in the Fourier mode at 12° and 68°C have been completely analysed by extensive computer simulation. It is shown, whether the coenzyme exists as an equilibrium mixture of folded ? extended forms (12°C) or in overwhelminghly extended forms (68°C), the backbone of both the nicotinamide and adenine fragments preferentially exist in ${}^2\text{E-gg-g′g′}$ conformation. This orientation is significantly different from those reported in the solid state for the extended species in contact with the enzyme where ${}^2\text{E-tg-g′g′}$ and ${}^3\text{E-tg-g′g′}$ orientations have been observed. It is suggested that specific interactions of the backbone with the various amino acid residues in the enzyme induces conformational aberrations in the backbone. Intimate details of the backbone conformation of the extended forms of AcPy-DPN⁺ and β-TPN⁺ are also presented.     

Characterization of the sub-transition of hydrated dipalmitoylphosphatidylcholine bilayers: X-ray diffraction study

The structural changes accompanying the recently described sub-transition of hydrated dipalmitoylphosphatidylcholine (Chen, S.C., Sturtevant, J.M. and Gaffney, B.J. (1980) Proc. Natl. Acad. Sci. USA 77, 5060–5063) have been defined using X-ray diffraction methods. Following prolonged storage at ?4°C the usual L_β′ gel form of hydrated dipalmitoylphosphatidylcholine (DPPC) is converted into a more ordered stable ‘crystal’ form. The bilayer periodicity is 59.1 Å and the most striking feature is the presence of a number of X-ray reflections in the wide angle region. The most prominent of these are a sharp reflection at $\text{1}\text{4.4}\text{A}\text{?}{}^{\mathrm{?1}}$ and a broader reflection at $\text{1}\text{3.9}\text{A}\text{?}{}^{\mathrm{?1}}$. This diffraction pattern is indicative of more ordered molecular and hydrocarbon chain packing modes in this low temperature ‘crystal’ bilayer form. At the sub-transition (T_rmsub = 15–20°C) an increase in the bilayer periodicity occurs ($\text{d=63.6}\text{A}\text{?}$) and a strong reflection at approx. $\text{1}\text{4.2}\text{A}\text{?}{}^{\mathrm{?1}}$ with a shoulder at approx. $\text{1}\text{4.1}\text{A}\text{?}{}^{\mathrm{?1}}$ is observed. This diffraction pattern is identical to that of the bilayer gel (L_β′) form of hydrated DPPC. Thus, the sub-transition corresponds to a bilayer ‘crystal’ → bilayer L_β′ gel structural rearrangement accompanied by a decrease in the lateral hydrocarbon chain interactions. Differential scanning calorimetry and X-ray diffraction show that on further heating the usual structural changes L_β′ → P_β′ and P_β′ → L_α occur at the pre- and main transitions, at approx. 35°C and 41°C, respectively.     

The solid state acyl shift of diglycerides: An electron diffraction study

The progress of the solid state acyl shift of 1,2-diglycerides to 1,3-diglycerides is followed at room temperature in single dipalmitin microcrystals by electron diffraction. The β′form, rather than the α-form of the 1,2-isomer, transforms to the 1,3 product. The β′ form packs in the monoclinic paraffin fashion, i.e. the O_⊥ methylene subcell and a chain tilt of 27° about the long subcell axis. After the isomerization, the chain tilt (14° to surface normal) occurs around the $\text{b}{}_{\mathrm{<mtext>S</mtext>}}{}^1$ axis of the resultant T_∥ methylene subcell.     

Oxotungsten(VI) complexes with schiff bases obtained from salicylaldehyde and various amines

Oxotungsten(VI) complexes have been synthesized with bi-, ter- and quadri-dentate Schiff bases obtained from salicylaldehyde and various amines. The following types of complexes have been isolated: (1) WOCl₃ (bidentate); (2) WOCl₂(terdentate); (3) WO₂(terdentate); (4) WO₂(terdentate). L, L being N,N-dimethylformamide (DMF) and pyridine (py). With quadridentate N,N′-ethylenebis(salicylaldiminate), WOCl₃(quadridentate)_{$\text{1}\text{2}$} has been obtained. Results of infrared spectra and electronic spectra are presented and possible structures of these complexes are discussed.     

Exogenous methionine depresses level of mRNA for a soybean storage protein

$\text{In vitro}$ translation experiments indicate that absence of the β-subunit of 7S storage protein in soybean ($\text{Glycine max}$ L. Merr. cv. Provar) cotyledons cultured on methionine-supplemented medium is due to lack of functional mRNA for that polypeptide. Relative amounts of functional mRNA for the 7S α′- and α-subunits were unaffected by methionine in the cotyledon culture medium. Measurements of β-subunit accumulation in cotyledons transferred from basal medium to methionine-supplemented medium show that methionine inhibits continued accumulation of the β-subunit after synthesis of the β-subunit has begun, and that methionine does not promote degradation of existing β-subunit.     

Studies on synthetic chromatins containing poly(dA-dT)·poly(dA-dT) and poly(dG-dC)·poly(dG-dC)

Core histones, (H2A,H2B,H3,H4)₂, were reconstituted with the synthethic polynucleotides poly(dA-dT)·poly(dA-dT) and poly(dG-dC)·poly(dG-dC) to yield synthetic chromatins containing 200 basepairs per octamer. These synthetic chromatins displayed a 36% decrease in the circular dichroism (CD) peak ellipticity from the value of the polynucleotide free in solution; the poly(dA-dT)·poly(dA-dT)/chromatin showed an increase in the complexity of the thermal denaturation profile compared to that of the polynucleotide. Both the temperature of maximum $\text{d}\text{h}\text{d}\text{T}$ for each transition (T_m) and the relative amount of poly(dA-dT)·poly(dA-dT) in the synthetic chromatin melting in each of the four thermal transitions is a function of the ionic strength over the 0–5 mM sodium phosphate range (0.25 mM EDTA, pH 7.0); a shift of material toward higher melting transitions was observed with increasing ionic strength. The CD peak ellipticity value for both synthetic chromatins was ionic strength-independent over the 0–5 mM sodium phosphate range. These results are in contrast to those observed with $\text{H}\text{1}\text{H}\text{5}$ stripped chicken erythrocyte chromatin (Fulmer, A. and Fasman, G.D. (1979) Biopolymers 18, 2875–2891), where an ionic strength dependence was found. Differences in the CD spectra between poly(dA-dT)·poly(dA-dT)/chromatin, poly(dG-dC)·poly(dG-dC)/chromatin and $\text{H}\text{1}\text{H}\text{5}$ stripped chicken erythrocyte chromatin suggest subtle differences in assembly. Finally, the temperature dependence of the CD spectra of poly(dA-dT)·poly(dA-dT)-containing synthetic chromatin, which is similar to that for the polynucleotide, suggests the core histone bound polynucleotide has a large degree of conformational flexibility allowing it to undergo the premelt transition.     

Guanosine-5′-diphosphate-3′-diphosphate inhibits the in, vitro synthesis of β-lactamase from pBR322 DNA

The $\text{in}\text{,}\text{vitro}$ synthesis of β-lactamase directed by pBR322 DNA is inhibited by guanosine-5′-diphosphate-3′-diphosphate.     

A nitroxide-sterol derivative potently modifies cholesterol biosynthesis by normal and neoplastic guinea pig lymphocytes

Leukemic guinea pig lymphocytes (L₂ C) synthesise cholesterol in vitro at a forty-fold greater rate than normal cells. Equilibration (18 h) with lecithin or lecithin-cholesterol liposomes, respectively, enhances or suppresses sterol manufacture by normal lymphocytes but does not influence sterol production by L₂ C cells. In contrast, $\text{> 5·10}{}^9$ molecules/cell of a nitroxide-derivative of androstane, (17 β-hydroxy-4′,4′-dimethylspiro [5 α-androstan-3,2′-oxazolidin]-3′-yloxyl), commonly used as a membrane spin-probe, drastically inhibit sterol production by both normal and leukemic cells (maximum within 2 h). At $\text{< 5·10}{}^9$ molecules/cell, this sterol stimulates cholesterol synthesis. 25-Hydroxycholesterol at low concentrations also stimulates sterol manufacture, whereas high concentrations are also inhibitory in both cell types.     

Identification of a phi X174 coded protein involved in the inhibition of beta-galactosidase synthesis in Escherichia coli

The synthesis of β-galactosidase (EC 3.2.1.23: β-D-galactoside galactohydrolase) in $\text{Escherichia}\text{coli}$ is repressed as a result of infection with single-stranded DNA phage ØX174. An $\text{amber}$ mutant in ØX174 cistron A, which codes for two proteins, does not inhibit the enzyme synthesis while $\text{amber}$ mutants in all other genes do cause repression. A mutant near the amino-terminal end of cistron A, which produces the small 35,000 molecular weight cistron A polypeptide, also inhibits the synthesis of β-galactosidase. Inhibition is also observed in an $\text{Escherichia}\text{coli}\text{rep}$ mutant which does not support the replication of replicative-form DNA. Exogenous nucleotide bases and cyclic 3′,5′-adenosine monophosphate (cyclic AMP) do not have any effect on the degree of repression.     

Possible involvement of DNA polymerases alpha and beta in bleomycin-induced unscheduled DNA synthesis in permeable HeLa cells

DNA polymerases involved in bleomycin-induced unscheduled DNA synthesis in some permeable human cells and rodent cells were studied by using selective inhibitors (aphidicolin, 2′,3′-dideoxythymidine-5′-triphosphate and N-ethylmaleimide) for DNA polymerases. The results suggest that both DNA polymerases α and β are involved in bleomycin-induced unscheduled DNA synthesis in permeable HeLa-S3 cells and probably in some other permeable human cells (HEp-2, KB and WI-38 VA-13 cells). Bleomycin-induced unscheduled DNA synthesis in some permeable rodent cells ($\text{SR-}\text{C3H}\text{He}$, $\text{Balb}\text{c}$ 3T3, 3Y1 and XC cells) is mostly attributed to DNA polymerase β.