水稻雄性不育突变体ms102的鉴定和基因定位

水稻(Oryza sativa)隐性核雄性不育突变体是第三代杂交水稻技术的核心。为了挖掘优质雄性不育突变体, 该研究通过筛选优质籼稻黄华占(HHZ)的甲基磺酸乙酯(EMS)诱变突变体库, 获得1个雄性不育突变体ms102 (male sterility mutant 102)。该突变体营养生长正常, 但花药不开裂, 花粉败育。细胞学分析表明, 突变体花药绒毡层不能正常降解, 导致小孢子发育异常; 遗传分析表明, 该突变体的不育表型由1个已报道编码酰基转移酶的DPW2基因突变造成。研究获得了1个隐性核雄性不育突变体, 进一步证实了DPW2基因在水稻花药发育中的功能。     

GmMs1 encodes a kinesin-like protein essential for male fertility in soybean (Glycine max L.)

The application of heterosis is a promising approach for greatly increasing yield in soybean (Glycine max L.). Nuclear male sterility is essential for hybrid seed production and the utilization of heterosis. Here we report the cloning of the gene underlying the soybean male-sterile mutant ms-1, which has been widely used for recurrent selection in soybean breeding programs. We initially delimited the ms1 locus to a 16.15 kb region on chromosome 13, based on SLAF_BSA sequencing followed by genotyping of an F₂ population segregating for the locus. Compared with the same region in fertile plants, the mutant region lacks a sequence of approximately 38.7 kb containing five protein-coding genes, including an ortholog of the kinesin-like protein gene NACK2, named GmMs1. The GmMs1 knockout plants generated via CRISPR/Cas-mediated gene editing displayed a complete male-sterile phenotype. Metabolic profiling showed that fertile anthers accumulated starch and sucrose normally, whereas sterile anthers had higher anthocyanin levels and lower flavonoid levels and lower antioxidant enzyme activities. These results provide insights into the molecular mechanisms governing male sterility and demonstrate that GmMs1 could be used to create male-sterile lines through targeted mutagenesis. These findings pave the way for designing seed production technology and an intelligent male-sterile line system to utilize heterosis in soybean.     

Cytochrome P450 mono-oxygenase CYP703A2 plays a central role in sporopollenin formation and ms5ms6 fertility in cotton

The double-recessive genic male-sterile (ms) line ms5 ms6 has been used to develop cotton (Gossypium hirsutum) hybrids for many years, but its molecular-genetic basis has remained unclear. Here, we identified the Ms5 and Ms6 loci through map-based cloning and confirmed their function in male sterility through CRISPR/Cas9 gene editing. Ms5 and Ms6 are highly expressed in stages 7–9 anthers and encode the cytochrome P450 mono-oxygenases CYP703A2-A and CYP703A2-D. The ms5 mutant carries a single-nucleotide C-to-T nonsense mutation leading to premature chain termination at amino acid 312 (GhCYP703A2-A^312aa), and ms6 carries three nonsynonymous substitutions (D98E, E168K, and G198R) and a synonymous mutation (L11L). Enzyme assays showed that GhCYP703A2 proteins hydroxylate fatty acids, and the ms5 (GhCYP703A2-A^312aa) and ms6 (GhCYP703A2-D^{D98E,E168K,G198R}) mutant proteins have decreased enzyme activities. Biochemical and lipidomic analyses showed that in ms5 ms6 plants, C12–C18 free fatty acid and phospholipid levels are significantly elevated in stages 7–9 anthers, while stages 8–10 anthers lack sporopollenin fluorescence around the pollen, causing microspore degradation and male sterility. Overall, our characterization uncovered functions of GhCYP703A2 in sporopollenin formation and fertility, providing guidance for creating male-sterile lines to facilitate hybrid cotton production and therefore exploit heterosis for improvement of cotton.     

A recent retrotransposon insertion of J caused E6 locus facilitating soybean adaptation into low latitude

Soybean (Glycine max) is an important legume crop that was domesticated in temperate regions. Soybean varieties from these regions generally mature early and exhibit extremely low yield when grown under inductive short-day (SD) conditions at low latitudes. The long-juvenile (LJ) trait, which is characterized by delayed flowering and maturity, and improved yield under SD conditions, allowed the cultivation of soybean to expand to lower latitudes. Two major loci control the LJ trait: J and E6. In the current study, positional cloning, sequence analysis, and transgenic complementation confirmed that E6 is a novel allele of J, the ortholog of Arabidopsis thaliana EARLY FLOWERING 3 (ELF3). The mutant allele e6^PG, which carries a Ty1/Copia-like retrotransposon insertion, does not suppress the legume-specific flowering repressor E1, allowing E1 to inhibit Flowering Locus T (FT) expression and thus delaying flowering and increasing yields under SD conditions. The e6^PG allele is a rare allele that has not been incorporated into modern breeding programs. The dysfunction of J might have greatly facilitated the adaptation of soybean to low latitudes. Our findings increase our understanding of the molecular mechanisms underlying the LJ trait and provide valuable resources for soybean breeding.     

Soybean AP1 homologs control flowering time and plant height

Flowering time and plant height are key agronomic traits that directly affect soybean (Glycine max) yield. APETALA1 (AP1) functions as a class A gene in the ABCE model for floral organ development, helping to specify carpel, stamen, petal, and sepal identities. There are four AP1 homologs in soybean, all of which are mainly expressed in the shoot apex. Here, we used clustered regularly interspaced short palindromic repeats (CRISPR) – CRISPR‐associated protein 9 technology to generate a homozygous quadruple mutant, gmap1, with loss‐of‐function mutations in all four GmAP1 genes. Under short‐day (SD) conditions, the gmap1 quadruple mutant exhibited delayed flowering, changes in flower morphology, and increased node number and internode length, resulting in plants that were taller than the wild type. Conversely, overexpression of GmAP1a resulted in early flowering and reduced plant height compared to the wild type under SD conditions. The gmap1 mutant and the overexpression lines also exhibited altered expression of several genes related to flowering and gibberellic acid metabolism, thereby providing insight into the role of GmAP1 in the regulatory networks controlling flowering time and plant height in soybean. Increased node number is the trait with the most promise for enhancing soybean pod number and grain yield. Therefore, the mutant alleles of the four AP1 homologs described here will be invaluable for molecular breeding of improved soybean yield.     

玉米隐性核不育突变体ms14的遗传分析与基因定位

玉米雄性不育材料是一种宝贵的种质资源,不育基因的遗传分析与定位研究对玉米分子育种和杂种优势利用具有重要价值。通过对从美国引进的玉米雄性不育突变体材料ms14进行雄花育性鉴定和花药I₂-KI染色,表明该突变体是无花粉型雄性不育;通过不育突变体ms14与正常自交系郑58、昌7-2杂交获得F₁,然后自交构建两个F₂遗传分离群体（ms14×郑58和ms14×昌7-2）,并进行雄花育性调查、数据统计和遗传分析,发现可育株数与不育株数的分离比是3∶1,表明该突变体由隐性单基因控制;通过SSR等分子标记与不育位点的连锁分析,将ms14基因定位在玉米第1染色体的SSR标记umc2025和umc1676之间,遗传距离分别是2.2cM和0.3cM。对玉米不育基因ms14的遗传分析和初步定位,为该基因的精细定位和克隆、不育机理的解析及其产业化应用奠定了基础。     

冬虫夏草寄主昆虫选育及生殖退化研究

选育发育速度快、繁殖能力强、中国被毛孢侵染率和冬虫夏草产出率高的寄主昆虫品系是冬虫夏草培植的基础,同时明确冬虫夏草的寄主昆虫蝙蝠蛾退化机制是保证冬虫夏草培植的条件。本文从冬虫夏草产区采集蝙蝠蛾种群种质资源,分别针对蝙蝠蛾发育速度、繁殖能力、中国被毛孢侵染率、冬虫夏草产出率4个方面通过杂交及四代选育,获得新种群（A1）,该种群对冬虫夏草繁育环境的适应力强,发育整齐度高,繁育一代的种群扩繁倍数从8.2倍提高至26.3倍;对中国被毛孢的敏感性较好,侵染率高,冬虫夏草产出率从原始种群的11.2%提高至18.5%。同时,仿照高原生态环境长期饲养冬虫夏草的寄主昆虫蝙蝠蛾,其子代出现雌雄比失调、发育历期分化、生殖力降低等退化现象。经过研究分析得知卵孵化率下降的主要原因是雄性的生殖力下降。组织切片观察蝙蝠蛾雄性生殖系统,在幼虫后期、蛹、成虫期会出现生精囊减少及畸形等异常情况,推测此为雄性生殖力降低、卵孵化率下降的生理原因。研究结果为高效、稳定地饲养蝙蝠蛾保证冬虫夏草培植具有重要意义。     

长链非编码RNA基因Ef-cd调控水稻早熟与稳产

水稻(Oryza sativa)育种中早熟和高产往往不能兼顾。最近一项研究分离鉴定了1个调控水稻早熟的基因Ef-cd (Early flowering-completely dominant)。Ef-cd编码一段长链非编码RNA (lncRNA), 该lncRNA与OsSOC1基因的一段反义转录本重叠, Ef-cd正调控H3K36me3的富集及OsSOC1基因的表达。在不同的纬度, 含有Ef-cd基因的品种及其杂交种与对照相比生育期缩短7-20天, 但产量不降低。对1 439份优质杂交稻品种的基因型分析显示, 含有Ef-cd基因的16份纯合子和299份杂合子均表现出明显的早熟特性。Ef-cd基因可能通过提高氮素利用率及光合效率来促进水稻早熟。因此, Ef-cd基因兼顾了水稻的早熟和产量, 在水稻分子育种中具有重要利用价值。     

长链非编码RNA基因Ef-cd调控水稻早熟与稳产

水稻(Oryza sativa)育种中早熟和高产往往不能兼顾。最近一项研究分离鉴定了1个调控水稻早熟的基因Ef-cd (Early flowering-completely dominant)。Ef-cd编码一段长链非编码RNA (lncRNA), 该lncRNA与OsSOC1基因的一段反义转录本重叠, Ef-cd正调控H3K36me3的富集及OsSOC1基因的表达。在不同的纬度, 含有Ef-cd基因的品种及其杂交种与对照相比生育期缩短7-20天, 但产量不降低。对1 439份优质杂交稻品种的基因型分析显示, 含有Ef-cd基因的16份纯合子和299份杂合子均表现出明显的早熟特性。Ef-cd基因可能通过提高氮素利用率及光合效率来促进水稻早熟。因此, Ef-cd基因兼顾了水稻的早熟和产量, 在水稻分子育种中具有重要利用价值。     

Engineering broad-spectrum disease-resistant rice by editing multiple susceptibility genes

Rice blast and bacterial blight are important diseases of rice (Oryza sativa) caused by the fungus Magnaporthe oryzae and the bacterium Xanthomonas oryzae pv. oryzae (Xoo), respectively. Breeding rice varieties for broad-spectrum resistance is considered the most effective and sustainable approach to controlling both diseases. Although dominant resistance genes have been extensively used in rice breeding and production, generating disease-resistant varieties by altering susceptibility (S) genes that facilitate pathogen compatibility remains unexplored. Here, using CRISPR/Cas9 technology, we generated loss-of-function mutants of the S genes Pi21 and Bsr-d1 and showed that they had increased resistance to M. oryzae. We also generated a knockout mutant of the S gene Xa5 that showed increased resistance to Xoo. Remarkably, a triple mutant of all three S genes had significantly enhanced resistance to both M. oryzae and Xoo. Moreover, the triple mutant was comparable to the wild type in regard to key agronomic traits, including plant height, effective panicle number per plant, grain number per panicle, seed setting rate, and thousand-grain weight. These results demonstrate that the simultaneous editing of multiple S genes is a powerful strategy for generating new rice varieties with broad-spectrum resistance.     

FHA2 is a plant-specific ISWI subunit responsible for stamen development and plant fertility

Imitation Switch (ISWI) chromatin remodelers are known to function in diverse multi‐subunit complexes in yeast and animals. However, the constitution and function of ISWI complexes in Arabidopsis thaliana remain unclear. In this study, we identified forkhead‐associated domain 2 (FHA2) as a plant‐specific subunit of an ISWI chromatin‐remodeling complex in Arabidopsis. By in vivo and in vitro analyses, we demonstrated that FHA2 directly binds to RLT1 and RLT2, two redundant subunits of the ISWI complex in Arabidopsis. The stamen filament is shorter in the fha2 and rlt1/2 mutants than in the wild type, whereas their pistil lengths are comparable. The shorter filament, which is due to reduced cell size, results in insufficient pollination and reduced fertility. The rlt1/2 mutant shows an early‐flowering phenotype, whereas the phenotype is not shared by the fha2 mutant. Consistent with the functional specificity of FHA2, our RNA‐seq analysis indicated that the fha2 mutant affects a subset of RLT1/2‐regulated genes that does not include genes involved in the regulation of flowering time. This study demonstrates that FHA2 functions as a previously uncharacterized subunit of the Arabidopsis ISWI complex and is exclusively involved in regulating stamen development and plant fertility.     

盐胁迫下大豆根组织定量PCR分析中内参基因的选择

实时荧光定量PCR已广泛用于基因表达的分析, 适当的内参基因选择是获得准确分析结果的关键。在大豆(Glycine max)分子生物学研究中, 逆境响应基因和microRNA (miRNA)表达的内参辅助检测基因均有哪些目前尚不清楚。该研究选用不同盐梯度和时间点组合处理的大豆根组织为材料, 对已报道的其它条件下表达相对稳定的内参基因(ACT、ACT2/7、CYP2、ELF1A、ELF1B、F-Box、TUA和UBC2)以及miRNA内参基因(U6、miR1515a、miR1520c、miR1520d、miR171a和miR171b)的表达情况进行了全面检测; 并采用Δ-Ct、Bestkeeper、NormFinder和Genorm四种方法对检测结果进行了综合分析, 发现ELF1B和CYP2适合作为大豆根系盐胁迫响应基因研究的内参基因, miR1515a和U6适合作为盐胁迫下大豆根组织miRNA研究的内参。上述研究结果为大豆盐胁迫响应基因和miRNA表达及其进一步的功能研究奠定了基础。     

大豆向热带地区发展的遗传基础

大豆(Glycine max)是光周期敏感的植物,该特性是决定其生育期及其生态适应区的关键因素。温带的大豆品种引种到热带地区(短日照)时,开花期和成熟期提前、产量降低,限制了大豆在热带地区的种植。长童期(LJ)大豆品种的发现是解决该问题的重要突破。在短日照条件下,LJ品种比温带品种开花晚、体量大、成熟晚且产量提高。前期研究发现,J位点是控制LJ性状的关键位点。近期,我国科学家通过精细定位克隆了J基因,发现其与拟南芥(Arabidopsis thaliana)早花基因(ELF3)同源。他们通过功能互补和近等基因系等方法验证了J基因的功能,在短日照条件下,等位基因j比J开花晚、成熟晚且产量提高。进一步研究发现,J蛋白与E1基因(豆科植物开花抑制因子)的启动子结合抑制E1基因的表达,从而解除E1对大豆开花基因(FT)的抑制,促进大豆在短日照下开花。研究还发现在大豆种质资源中存在多种j等位变异。该研究引领了大豆生育期遗传研究的新方向,揭示了大豆向热带地区发展的遗传基础。     

籼稻二元不育系9730A及三交种的初步研究

通过对所选育的籼稻二元不育系9730A的花粉育性、自交结实率、雌性育性、对"920"的敏感性、柱头外露情况、花时、雄性不育的可恢复性及三交种的抽穗整齐度、有效穗、株高、单株产量、结实率、主茎穗长、主茎叶长、穗粒等变异度的分析,对杂交水稻三交法育种的应用价值进行初步探讨.结果认为:通过引进具有不同优良品种特性的第二保持系,可以在保持所选育杂种品种主要农艺性状整齐一致的前提下,较大幅度地拓宽品种的遗传基础,改进雄性不育系的异交性能,从而为提高杂种种子生产水平、及时利用优良常规稻育种成果材料和综合实现杂交稻品种选育过程中的多抗、广适、高产、优质育种目标提供新的途径.     

Increasing yield potential through manipulating of an ARE1 ortholog related to nitrogen use efficiency in wheat by CRISPR/Cas9

Wheat (Triticum aestivum L.) is a staple food crop consumed by more than 30% of world population. Nitrogen (N) fertilizer has been applied broadly in agriculture practice to improve wheat yield to meet the growing demands for food production. However, undue N fertilizer application and the low N use efficiency (NUE) of modern wheat varieties are aggravating environmental pollution and ecological deterioration. Under nitrogen-limiting conditions, the rice (Oryza sativa) abnormal cytokinin response1 repressor1 (are1) mutant exhibits increased NUE, delayed senescence and consequently, increased grain yield. However, the function of ARE1 ortholog in wheat remains unknown. Here, we isolated and characterized three TaARE1 homoeologs from the elite Chinese winter wheat cultivar ZhengMai 7698. We then used CRISPR/Cas9-mediated targeted mutagenesis to generate a series of transgene-free mutant lines either with partial or triple-null taare1 alleles. All transgene-free mutant lines showed enhanced tolerance to N starvation, and showed delayed senescence and increased grain yield in field conditions. In particular, the AABBdd and aabbDD mutant lines exhibited delayed senescence and significantly increased grain yield without growth defects compared to the wild-type control. Together, our results underscore the potential to manipulate ARE1 orthologs through gene editing for breeding of high-yield wheat as well as other cereal crops with improved NUE.     

Deficiency of mitochondrial outer membrane protein 64 confers rice resistance to both piercing‐sucking and chewing insects in rice

The brown planthopper (BPH) and striped stem borer (SSB) are the most devastating insect pests in rice (Oryza sativa ) producing areas. Screening for endogenous resistant genes is the most practical strategy for rice insect‐resistance breeding. Forty‐five mutants showing high resistance against BPH were identified in a rice T‐DNA insertion population (11,000 putative homozygous lines) after 4 years of large‐scale field BPH‐resistance phenotype screening. Detailed analysis showed that deficiency of rice mitochondrial outer membrane protein 64 (OM64 ) gene resulted in increased resistance to BPH. Mitochondrial outer membrane protein 64 protein is located in the outer mitochondrial membrane by subcellular localization and its deficiency constitutively activated hydrogen peroxide (H₂O₂) signaling, which stimulated antibiosis and tolerance to BPH. The om64 mutant also showed enhanced resistance to SSB, a chewing insect, which was due to promotion of Jasmonic acid biosynthesis and related responses. Importantly, om64 plants presented no significant changes in rice yield‐related characters. This study confirmed OM64 as a negative regulator of rice herbivore resistance through regulating H₂O₂ production. Mitochondrial outer membrane protein 64 is a potentially efficient candidate to improve BPH and SSB resistance through gene deletion. Why the om64 mutant was resistant to both piercing‐sucking and chewing insects via a gene deficiency in mitochondria is discussed.     

干旱胁迫下拟南芥中H_2S与ABA信号关系研究

以野生型拟南芥(WT)、硫化氢(H_2S)合成酶缺失型突变体lcd、脱落酸(ABA)合成缺失型突变体aba1实生苗为材料,以0.3 mol·L^-1甘露醇模拟干旱胁迫,研究干旱胁迫对ABA含量、H_2S含量的影响,及其在拟南芥抵抗干旱胁迫中的作用及信号关系。结果显示:干旱胁迫显著提高LCD和ABA1基因相对表达以及H_2S含量,ABA含量;干旱胁迫显著抑制突变体lcd、aba1的种子萌发;干旱胁迫下,外施NaHS促进干旱胁迫下WT、lcd和aba1中內源H_2S的产生及上调LCD、ABA1基因相对表达,而外施ABA提高干旱胁迫下WT、aba1中H_2S含量及LCD、ABA1基因相对表达,但是对lcd中H_2S含量及LCD基因相对表达没有显著影响。研究结果表明,信号分子H_2S和ABA在拟南芥的干旱胁迫响应中发挥一定的作用,且H_2S位于ABA的下游参与调控拟南芥的信号过程。