Synthesis of viruslike particles by expression of the putative capsid protein of Leishmania RNA virus in a recombinant baculovirus expression system.

The putative capsid open reading frame (ORF2) of the Leishmania RNA virus LRV1-4 was expressed in a baculovirus expression system. The expressed protein was identified by Western immunoblot analysis with polyclonal antiserum raised to purified LRV1-4 virus. Electron microscopy and sedimentation analysis indicated that the expressed protein self-assembles into empty viruslike particles of similar size and shape to authentic virus particles, thus confirming that ORF2 encodes the viral capsid. The expressed particles are present exclusively in the cytoplasm of infected SF9 cells and are able to assemble in the absence of LRV1-4 RNA, viral polymerase, or any Leishmania host factors.     

Coat Protein-derived Small Particles in a Tombusvirus from River Lato

A new tombusvirus cleariy distinguishable from other members of the group was isolated in Apulia from river Lato and therefore referred to as Lato River Tombusvirus (LRV). Purified virus preparations after storage for 5 months at 4°C in 20 mM phosphate buffer, pH 7.2, contained variable amounts of small particles (c. 17 nm in diameter) in addition to typical virus particles (c. 30 nm in diameter). LRV small particles were constituted by a single protein species with a tnol. wt of 29,000, did not contain nucleic acid and were not infective but proved to be serologically undistinguishable from ordinary virus particles. Attempts to artificially produce small particles by chemical orenzymatic treatments of full size LRV virions failed but their spontaneous production nder particularstorage conditions seems to be a remarkable feature of this virus as it does not occur with other definitive tombusviruses.     

云南五个不同地区烟草花叶病毒外壳蛋白基因的序列比较

Five Tobacco mosaic virus isolates, obtained from tobacco leaves showing typical symptom in Qujing, Honghe, Dali, Chuxiong and Yuxi in Yunnan province, were selected and studied from 637 TMV samples. Using a pair of primers specific for TMV-U1 strain, a specific fragment of 530bp including the TMV coat protein gene was amplified using IC-PCR. The products of PCR were cloned and sequenced. The nucleotide and amino acid sequences of the coat protein of the five isolates were found to be very similar each other and have more than 90% sequence identity with TMV-U1, TMV-B,TMV-P, TMV-FUJIAN, although minor differences existed among them. The results showed that the five isolates from Yunnan province belong toTMV-U1 strain.     

十字花科蔬菜上黄瓜花叶病毒分离物的比较研究

对从杭州市郊青菜、萝卜、花椰菜上分离的6个CMV分离物进行了生物学、血清学及双链RNA比较研究。生物学测定结果表明,不同分离物在所测定的6种十字花科蔬菜上的致病力有差异。6种分离物颗粒形态、衣壳蛋白分子量和血清学方面无差异,且都属血清型Ⅰ。dsRNA分析结果表明,6个分离物的dsRNAl,2,3和4在PAGE中迁移率相似,但在1.5kb～0.4kb之间有多条量相对较少的条带,这些条带在不同分离物之间差异较大。6个分离物均含有卫星RNA。     

Detection and molecular characterisation of Potato virus S of weed reservoirs in Iran

Potato virus S causes destructive disease on the plants. In this research, 44 weed samples symptomless were collected during 2015 from Fars, Razavi Khorasan and Kerman provinces of Iran. The coat protein (CP) and 11 K genes from eight PVS isolates were amplified, cloned and sequenced. PVS was detected in eight weed samples including: one sample of Solanum nigrum, two samples of Chenopodium botrytis, three samples of Chenopodium album and two samples of Amaranthus hybridus. Phylogenetic analysis showed that seven Iranian isolates fell into group I, II near to European isolates and one Iranian isolate formed a separate group. Comparison of coat protein and 11 k nucleotide indicated that all Iranian isolates belonged to Ordinary strain and there were 79–100% identity among the eight Iranian isolates and the world isolates of PVS. The highest identity was between Iranian and Ukraine isolates. Recombination analysis identified four recombinant isolates among eight new Iranian isolates.     

Monoclonal antibodies specific for potato mop-top virus, and some properties of the coat protein

A method was devised which gave consistent yields (1–2 mg/kg leaves) of potato mop-top furovirus (PMTV) particles. Monoclonal antibodies (MAbs) were produced and some properties of 10 of them were studied. Four MAbs readily detected PMTV isolates from six countries in Northern Europe and Japan when the isolates were trapped with polyclonal antibody; and diagnostic tests based solely on MAbs (SCR 68 to coat plates and biotin- or enzyme-labelled SCR 69 to detect trapped virus) were devised. The pattern of reactions of the MAbs in ELISA and immunoblots suggested that they react with at least five different epitopes. PMTV coat protein preparations were analysed by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) and immunoblotting. Three bands of 23.9 kd, 21.5 kd and 20.5 kd were visible in silver-stained gels and all three reacted with PMTV specific MAbs. The relative amounts of the three bands varied between different virus preparations, but the 21.5 kd band was usually the most abundant. The three bands were probably not produced by anomalous behaviour in SDS-PAGE. Moreover PMTV protein was readily degraded by trypsin treatment giving a band of 20.5 kd. Therefore the results suggest that PMTV coat protein sub-units are sensitive to degradation by plant proteases. At least two degraded forms were found when purified preparations were analysed by SDS-PAGE, and the undegraded protein was estimated to be 23.9 kd. The PMTV MAbs did not react in immunoblots with SDS-treated coat protein preparations of beet necrotic yellow vein furovirus or Indian peanut clump furovirus.     

Suppression of Leishmania RNA virus replication by capsid protein overexpression.

Some strains of the protozoan parasite genus Leishmania are persistently infected with single-segmented double-stranded RNA viruses, which are termed LRV. The function of these cytoplasmic viruses is unknown. In order to address the question of whether LRV affects the parasite's phenotype, pairs of isogenic LRV(+)-LRV- lines are required. Since the persistent nature of these viruses precludes de novo infection of virus-negative strains, LRV(+)-LRV- strains were transformed with a Leishmania expression vector expressing the LRV capsid protein with the aim of determining if LRV- promastigotes support capsid assembly and if LRV replication is affected by excess capsid protein. I found that in LRV- promastigotes, capsid protein was capable of self-assembly into virus-like capsids and that capsid overexpression in a naturally infected LRV+ line resulted in a progressive reduction in LRV copy number. Clonal lines derived from an LRV+ capsid overexpressor had no detectable levels of LRV. These results demonstrate that LRV replication can be inhibited and that a significant reduction of viral copy number has no effect on the parasite's viability in liquid medium.     

Detection of Leishmania RNA virus 1 proteins.

Polyclonal antiserum was raised against the peak viral fraction of a sucrose gradient from LRV1-4-infected cells and used in Western immunoblot analysis to identify viral proteins from various isolates. Consistent with this result, in vitro-translated protein from cloned RNA was immunoprecipitated with the same antiserum. The putative capsid at times appeared as a doublet; relative amounts of the two species varied, depending on the method of purification.     

Mutational analysis of the capsid protein of Leishmania RNA virus LRV1-4.

The virion of Leishmania RNA virus is predicted to be composed of a 742-amino-acid major capsid protein and a small percentage of capsid-polymerase fusion molecules. Recently, the capsid protein alone was expressed and shown to spontaneously assemble into viruslike particles. Since the major structural protein of the virion shell self-assembles into viruslike particles when expressed in the baculovirus expression system, assembly of the virion can be studied by mutational analysis and expression of a single open reading frame. In this study, several deletions and one addition of the capsid protein of Leishmania RNA virus LRV1-4 were generated. These mutants show different degrees of assembly. Assembly domains are being identified such that the capsid protein may be used as a macromolecular packaging and delivery system for Leishmania species.     

Rapid vascular movement of tobraviruses does not require coat protein: evidence from mutated and wild-type viruses

Early studies of the tobravirus Tobacco rattle virus (TRV) described two types of virus isolate with apparently different disease characteristics. M‐type isolates, which contain both viral genomic RNAs and form virus particles, could be passaged by mechanical inoculation and produced rapid but shortlived systemic symptoms. In contrast, NM‐type isolates, which contain only RNA1 and do not form virus particles, were difficult to passage by mechanical inoculation and were very slow to produce systemic symptoms. From the early observations on such isolates made in the 1960s, it has become accepted that M isolates with encapsidated TRV particles move rapidly through the vascular system whereas NM isolates containing only unencapsidated TRV RNA1 move only slowly via plasmodesmata from cell to cell and take many weeks to reach the upper parts of plants. However, we show that NM isolates of TRV and another tobravirus Pea early‐browning virus (PEBV) move into systemic tissue of TV. benthamiana and N. clevelandii by 6 days post inoculation, suggesting that this rapid movement occurs via the vasculature. The systemic movement of TRV and PEBV mutants lacking functional coat protein that have been modified to express the green fluorescent protein were examined by confocal microscopy. This confirmed that the tobraviruses do not require the CP for long distance movement via the phloem, a property that is shared with only a small group of plant viruses.     

Biological and Molecular Characterization of Taiwanese Isolates of Cucumber mosaic virus Associated with Banana Mosaic Disease

Banana mosaic disease (BMD) caused by Cucumber mosaic virus (CMV) has become an important threat to the banana industry. We collected and characterized 10 CMV isolates associated with BMD in Taiwan and compared their biological characteristics and coat protein sequences. The isolates fell into four pathotypes on the basis of the symptoms they induce on banana, Nicotiana glutinosa and Vigna unguiculata (cowpea). Double-stranded RNA analysis revealed that the different pathotypes are not related to the presence of CMV satellite RNA. Phylogenetic analysis of worldwide CMV coat protein sequences revealed that among the currently known CMV subgroups IA, IB and II, subgroup IB is phylogenetically unresolved. Our CMV isolates form a new subgroup, IT, within subgroup I. In addition, we resolved another new CMV subgroup, IS, within subgroup I. The analysis also revealed that isolates within different subgroups can infect the banana.     

Assembly of two independent populations of flock house virus particles with distinct RNA packaging characteristics in the same cell

Flock House virus (FHV; Nodaviridae) is a positive-strand RNA virus that encapsidates a bipartite genome consisting of RNA1 and RNA2. We recently showed that specific recognition of these RNAs for packaging into progeny particles requires coat protein translated from replicating viral RNA. In the present study, we investigated whether the entire assembly pathway, i.e., the formation of the initial nucleating complex and the subsequent completion of the capsid, is restricted to the same pool of coat protein subunits. To test this, coat proteins carrying either FLAG or hemagglutinin epitopes were synthesized from replicating or nonreplicating RNA in the same cell, and the resulting particle population and its RNA packaging phenotype were analyzed. Results from immunoprecipitation analysis and ion-exchange chromatography showed that the differentially tagged proteins segregated into two distinct populations of virus particles with distinct RNA packaging phenotypes. Particles assembled from coat protein that was translated from replicating RNA contained the FHV genome, whereas particles assembled from coat protein that was translated from nonreplicating mRNA contained random cellular RNA. These data demonstrate that only coat proteins synthesized from replicating RNA partake in the assembly of virions that package the viral genome and that RNA replication, coat protein translation, and virion assembly are processes that are tightly coupled during the life cycle of FHV.     

Characterization of Closterovirus-like Particles Associated with Grapevine Leafroll Disease

Abstract A purification procedure (Z ee et al. 1987) for closterovirus-like particles associated with grapevine leafroll disease was improved after various sources of plant tissues, extraction buffers, pH values, and centrifugation techniques had been examined. An antiserum against the CA-4 isolate was produced and used in ELISA. The virus-like particles of the NY-1 isolate measured in crude plant preparations were about 1,800 to 1,900 nm long. The molecular weight of coat protein of the NY-1and NY-2 isolates were ca. 43 × 10³ daltons in SDS-PAGE analysis; and bands having this molecular weight reacted in Western blotting tests with specific polyclonal and monoclonal antibodies. A large dsRNA molecule (ca. 10 × 10⁶ Mr) along, with lower molecular weight species were isolated from leafroll diseased grapevines, but not from healthy grapevines. Seven leafroll isolates were tested for their serological relatedness in a protein A-gold labelling immunosorbent electron microscopy, assay. Results indicated that serologically distinct serotypes existed, and mixed infection of grapevines with different scrotypes was common. A grouping of isolates into serotype I, II, III, IV is proposed.     

Determination of the complete amino acid sequence for the coat protein of brome mosaic virus by time-of-flight mass spectrometry. Evidence for mutations associated with change of propagation host

Time-of-flight mass spectrometry (TOFMS) has been applied to determine the complete coat protein amino acid sequences of a number of distinct brome mosaic virus (BMV) isolates. Ionization was carried out by both electrospray ionization and matrix-assisted laser desorption/ionization (MALDI). After determining overall coat protein masses, the proteins were digested with trypsin or Lys-C proteinases, and the digestion products were analyzed in a MALDI QqTOF mass spectrometer. The N terminus of the coat protein was found to be acetylated in each BMV isolate analyzed. In one isolate (BMV-Valverde), the amino acid sequence was identical to that predicted from the cDNA sequence of the "type" isolate, but deviations from the predicted amino acid sequence were observed for all the other isolates analyzed. When isolates were propagated in different host taxa, modified coat protein sequences were observed in some cases, along with the original sequence. Sequencing by TOFMS may therefore provide a basis for monitoring the effects of host passaging on a virus at the molecular level. Such TOFMS-based analyses assess the complete profiles of coat protein sequences actually present in infected tissues. They are therefore not subject to the selection biases inherent in deducing such sequences from reverse-transcribed viral RNA and cloning the resulting cDNA.     

Effect of cessation of phospholipid synthesis on the synthesis of a specific membrane-associated bacteriophage protein in Escherichia coli.

The major coat protein of the bacteriophage f1 is synthesized during infection of Escherichia coli and becomes tightly associated with the host membrane. This synthesis was studied in conjunction with the strain BB26-36, a mutant defective in phospholipid synthesis, to investigate basic questions concerning membrane protein and phospholipid synthesis. Coat protein synthesis is decreased in the absence of net phospholipid synthesis. The coat protein produced under these conditions is still found tightly associated with the membrane. Resumption of phospholipid synthesis leads to an increase in the synthesis and accumulation of the coat protein. Therefore, a correlation between coat protein and phospholipid synthesis seems to exist. However, the packaging of phage deoxyribonucleic acid into phage particles proceeds in the absence of phospholipid synthesis, and the number of phage particles produced appears to depend only on the amount of coat protein in the membrane.     

Occurrence of fungally transmitted wheat mosaic viruses in China

A soil-borne mosaic disease of winter wheat in Sichuan, Shaanxi, Hubei and Henan provinces was associated with infection by a virus with filamentous particles and that in Shandong, Anhui, Jiangsu and Zhejiang provinces by co-infection with this virus and soil-borne wheat mosaic virus. The virus with filamentous particles was identified serologically, by particle sizes, cytopathology and the molecular weights of the coat protein and the two RNA species to be either wheat spindle streak mosaic virus (WSSMV) or wheat yellow mosaic virus. These viruses are probably isolates of the same virus and the name WSSMV is preferred. In baiting tests using infested soil, the dilution endpoints for detecting WSSMV were 1/625-1/15625, and for the fungus vector, Polymyxa graminis, 1/3125-1/15625.     

杭州地区发生的玉米花叶病由甘蔗花叶病毒引起

从杭州地区呈现玉米矮花叶典型症状的玉米病组织中提纯得到大量线状病毒粒子,大多数长度为750?nm。病组织中含有大量风轮状内含体和板状集结体。病毒外壳蛋白为33.6 kD。病毒RNA13’端序列(1.8 kb)与甘蔗花叶病毒(SCMV)同源性最高,达71.5%～99.1%,与高梁花叶病毒(SrMV)同源性次之,为67.8%～68.5%,与玉米矮花叶病毒(MDMV)同源性最低,仅为38.4%～48.4%,从而初步认为此病害由SCMV引起。根据已发表的SCMV外壳蛋白氨基酸序列作亲缘性分析,表明SCMV可分为美国、南非、澳大利亚;德国和中国三大类。     

Beet luteovirus coat protein sequence variation

The sequences of cDNA clones covering the coat protein genes of 29 isolates of beet mild yellowing virus from sugar beet and beet western yellows virus mainly from oilseed rape were compared. The sequences could be partitioned into seven distinct clusters falling into three main groups. Group 1 isolates were found both in oilseed rape and sugar beet mainly from north Europe; group 2 isolates were from hosts other than sugar beet in England and France; group 3 isolates were beet-specific and found from northern Italy and Iran. The factors affecting this variation and its significance in relation to coat protein-mediated protection are discussed.