共查询到20条相似文献,搜索用时 0 毫秒
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Biological solutions to transport network design 总被引:3,自引:0,他引:3
Bebber DP Hynes J Darrah PR Boddy L Fricker MD 《Proceedings. Biological sciences / The Royal Society》2007,274(1623):2307-2315
Transport networks are vital components of multicellular organisms, distributing nutrients and removing waste products. Animal and plant transport systems are branching trees whose architecture is linked to universal scaling laws in these organisms. In contrast, many fungi form reticulated mycelia via the branching and fusion of thread-like hyphae that continuously adapt to the environment. Fungal networks have evolved to explore and exploit a patchy environment, rather than ramify through a three-dimensional organism. However, there has been no explicit analysis of the network structures formed, their dynamic behaviour nor how either impact on their ecological function. Using the woodland saprotroph Phanerochaete velutina, we show that fungal networks can display both high transport capacity and robustness to damage. These properties are enhanced as the network grows, while the relative cost of building the network decreases. Thus, mycelia achieve the seemingly competing goals of efficient transport and robustness, with decreasing relative investment, by selective reinforcement and recycling of transport pathways. Fungal networks demonstrate that indeterminate, decentralized systems can yield highly adaptive networks. Understanding how these relatively simple organisms have found effective transport networks through a process of natural selection may inform the design of man-made networks. 相似文献
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Ariff A.B. Rosfarizan M. Herng L.S. Madihah S. Karim M.I.A. 《World journal of microbiology & biotechnology》1997,13(2):195-201
An unstructured model based on logistic and Luedeking-Piret equations was proposed to describe growth, substrate consumption and kojic acid production by Aspergillus flavus Link strain 44-1 in batch fermentation and also in a resuspended cell system. The model showed that kojic acid production was non-growth associated. The maximum kojic acid and cell concentrations obtained in batch fermentations using the fermenter with optimized dissolved oxygen control (32.5 g/l and 11.8 g/l, respectively) and using a shake-flask (36.5 and 12.3 g/l, respectively) were not significantly different. However, the maximum specific growth rate and a non-growth-associated rate constant for kojic acid formation (n) for batch fermentation using the fermenter (0.085/h and 0.0125 g kojic acid/g cell.h, respectively) were approximately three and two times higher than the values obtained for fermentation using a shake-flask, respectively. Efficient conversion of glucose to kojic acid was achieved in a resuspended pellet or mycelial system, in a solution containing only glucose with citrate buffer at pH 3.5 and at a temperature of 30 °C. The resuspended cell material in the glucose solution was still active in synthesizing kojic acid after prolonged incubation (up to about 600 h). The rate constant of kojic acid production (n) in a resuspended cell system using 100 g glucose/l was almost constant at an average value of 0.011 g kojic acid/g cell.h up to a cell concentration of 19.2 g/l, above which it decreased. A drastic reduction of n was observed at a cell concentration of 26.1 g/l. However, the yield based on glucose consumed (0.45 g/g) was similar for all cell concentrations investigated. 相似文献
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Catherine E. Grueber Samantha Fox Elspeth A. McLennan Rebecca M. Gooley David Pemberton Carolyn J. Hogg Katherine Belov 《Evolutionary Applications》2019,12(2):280-291
For bottlenecked populations of threatened species, supplementation often leads to improved population metrics (genetic rescue), provided that guidelines can be followed to avoid negative outcomes. In cases where no “ideal” source populations exist, or there are other complicating factors such as prevailing disease, the benefit of supplementation becomes uncertain. Bringing multiple data and analysis types together to plan genetic management activities can help. Here, we consider three populations of Tasmanian devil, Sarcophilus harrisii, as candidates for genetic rescue. Since 1996, devil populations have been severely impacted by devil facial tumour disease (DFTD), causing significant population decline and fragmentation. Like many threatened species, the key threatening process for devils cannot currently be fully mitigated, so species management requires a multifaceted approach. We examined diversity of 31 putatively neutral and 11 MHC‐linked microsatellite loci of three remnant wild devil populations (one sampled at two time‐points), alongside computational diversity projections, parameterized by field data from DFTD‐present and DFTD‐absent sites. Results showed that populations had low diversity, connectivity was poor, and diversity has likely decreased over the last decade. Stochastic simulations projected further diversity losses. For a given population size, the effects of DFTD on population demography (including earlier age at death and increased female productivity) did not impact diversity retention, which was largely driven by final population size. Population sizes ≥500 (depending on the number of founders) were necessary for maintaining diversity in otherwise unmanaged populations, even if DFTD is present. Models indicated that smaller populations could maintain diversity with ongoing immigration. Taken together, our results illustrate how multiple analysis types can be combined to address complex population genetic challenges. 相似文献
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A. V. Vorob’ev N. A. Manucharova A. M. Yaroslavtsev E. V. Belova D. G. Zvyagintsev I. I. Sudnitsyn 《Microbiology》2007,76(5):557-562
The dynamics of assimilation of chitin by soil microorganisms (primarily prokaryotes) as a source of carbon and nitrogen has been determined by gas chromatography and fluorescence microscopy. The highest rates of chitin decomposition in chernozem were detected at humidity levels corresponding to the pressure of soil moisture (P) of ?1.4 atm. The rate of microbial consumption of chitin is three times higher than that of the carbon of soil organic matter. Fluorescence microscopy revealed that an increase in the pressure of soil moisture from P = ?10 atm to P = ?0.7 atm resulted in a considerable increase in the proportion of the specific surface of mycelial bacteria (actinomycetes). 相似文献
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加拿大一枝黄花对土壤营养元素吸收与转运特征 总被引:3,自引:0,他引:3
选择临海沿江镇加拿大一枝黄花重度入侵区域,分别收集植物与土壤样品,研究加拿大一枝黄花对土壤中7种营养元素的吸收、转运特征。研究结果表明:7种营养元素在植物组织中的平均含量排序为:Zn〉K〉Ca〉N〉Mg〉P〉Mn。而且不同器官对同一种元素的积累存在显著差异,总体规律表现为叶和花蕾积累元素最多,其次是枝条和根状茎,根和茎则积累最少。地上器官对各元素的转移能力表现出明显差异,但各器官均对氮素有较强的转运能力,转运因子均明显高于1。地下器官(根和根状茎)对氮素有较高的富集能力,富集因子同样明显高于1。7种元素在加拿大一枝黄花不同器官的吸收转运存在着一定的促进或者拮抗作用。在花蕾、枝条和根中,磷吸收分别与Mg、Mn和Zn吸收呈现显著负相关;在花蕾中,氮的吸收和Mn的吸收呈现显著正相关;在不同器官里,K、Ca、Mg、Zn和Mn吸收之间多呈现正相关。 相似文献
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Characterization of the translocon of the outer envelope of chloroplasts 总被引:14,自引:0,他引:14
The protein translocon of the outer envelope of chloroplasts (Toc) consists of the core subunits Toc159, Toc75, and Toc34. To investigate the molecular structure, the core complex was purified. This core complex has an apparent molecular mass of approximately 500 kD and a molecular stoichiometry of 1:4:4-5 between Toc159, Toc75, and Toc34. The isolated translocon recognizes both transit sequences and precursor proteins in a GTP-dependent manner, suggesting its functional integrity. The complex is embedded by the lipids phosphatidylcholine and digalactosyldiacylglyceride. Two-dimensional structural analysis by EM revealed roughly circular particles consistent with the formation of a stable core complex. The particles show a diameter of approximately 130 A with a solid ring and a less dense interior structure. A three-dimensional map obtained by random conical tilt reconstruction of electron micrographs suggests that a "finger"-like central region separates four curved translocation channels within one complex. 相似文献
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A large data set (n = 154) of phytoplankton production and biomass in relation to physico-chemical environmental factors was collected from 1979 to 1986 in a recently created sand-pit lake (Paris suburbs). These data are well suited to interpret the oligotrophication observed along the 8 years period, characterized by a regular decrease in chlorophyll (from 16 to 4 µg l-1 as annual averages).A model describing the ecological functioning of the lake has been established. Biological processes related to phyto-, bacterio- and zooplankton as well as sediment-water interactions, are described within several submodels. Most of the parameters involved were determined by in situ measurements in this or similar environments The model provides a good simulation of observed data and confirms that the reduction of nutrient loading, resulting from the diversion — in 1981 — of a sewer previously discharging into the lake, was responsible for the oligotrophication of the system. The model allows to explore the response of planktonic compartments accross a gradient of nutrient loading. The role of hydrology is also tested. The systematic run of the model with and without zooplankton leads to a better understanding of top-down control. 相似文献
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Mercado LM Patiño S Domingues TF Fyllas NM Weedon GP Sitch S Quesada CA Phillips OL Aragão LE Malhi Y Dolman AJ Restrepo-Coupe N Saleska SR Baker TR Almeida S Higuchi N Lloyd J 《Philosophical transactions of the Royal Society of London. Series B, Biological sciences》2011,366(1582):3316-3329
The rate of above-ground woody biomass production, W(P), in some western Amazon forests exceeds those in the east by a factor of 2 or more. Underlying causes may include climate, soil nutrient limitations and species composition. In this modelling paper, we explore the implications of allowing key nutrients such as N and P to constrain the photosynthesis of Amazon forests, and also we examine the relationship between modelled rates of photosynthesis and the observed gradients in W(P). We use a model with current understanding of the underpinning biochemical processes as affected by nutrient availability to assess: (i) the degree to which observed spatial variations in foliar [N] and [P] across Amazonia affect stand-level photosynthesis; and (ii) how these variations in forest photosynthetic carbon acquisition relate to the observed geographical patterns of stem growth across the Amazon Basin. We find nutrient availability to exert a strong effect on photosynthetic carbon gain across the Basin and to be a likely important contributor to the observed gradient in W(P). Phosphorus emerges as more important than nitrogen in accounting for the observed variations in productivity. Implications of these findings are discussed in the context of future tropical forests under a changing climate. 相似文献
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In this paper, we present a modelling framework for cellular evolution that is based on the notion that a cell’s behaviour is driven by interactions with other cells and its immediate environment. We equip each cell with a phenotype that determines its behaviour and implement a decision mechanism to allow evolution of this phenotype. This decision mechanism is modelled using feed-forward neural networks, which have been suggested as suitable models of cell signalling pathways. The environmental variables are presented as inputs to the network and result in a response that corresponds to the phenotype of the cell. The response of the network is determined by the network parameters, which are subject to mutations when the cells divide. This approach is versatile as there are no restrictions on what the input or output nodes represent, they can be chosen to represent any environmental variables and behaviours that are of importance to the cell population under consideration. This framework was implemented in an individual-based model of solid tumour growth in order to investigate the impact of the tissue oxygen concentration on the growth and evolutionary dynamics of the tumour. Our results show that the oxygen concentration affects the tumour at the morphological level, but more importantly has a direct impact on the evolutionary dynamics. When the supply of oxygen is limited we observe a faster divergence away from the initial genotype, a higher population diversity and faster evolution towards aggressive phenotypes. The implementation of this framework suggests that this approach is well suited for modelling systems where evolution plays an important role and where a changing environment exerts selection pressure on the evolving population. 相似文献
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Gerardo I?iguez Tzipe Govezensky Robin Dunbar Kimmo Kaski Rafael A. Barrio 《Proceedings. Biological sciences / The Royal Society》2014,281(1790)
Honesty plays a crucial role in any situation where organisms exchange information or resources. Dishonesty can thus be expected to have damaging effects on social coherence if agents cannot trust the information or goods they receive. However, a distinction is often drawn between prosocial lies (‘white’ lies) and antisocial lying (i.e. deception for personal gain), with the former being considered much less destructive than the latter. We use an agent-based model to show that antisocial lying causes social networks to become increasingly fragmented. Antisocial dishonesty thus places strong constraints on the size and cohesion of social communities, providing a major hurdle that organisms have to overcome (e.g. by evolving counter-deception strategies) in order to evolve large, socially cohesive communities. In contrast, white lies can prove to be beneficial in smoothing the flow of interactions and facilitating a larger, more integrated network. Our results demonstrate that these group-level effects can arise as emergent properties of interactions at the dyadic level. The balance between prosocial and antisocial lies may set constraints on the structure of social networks, and hence the shape of society as a whole. 相似文献
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A simulation model of S, P and N cycling in pastures was constructed as a conceptual and predictive tool to examine a range of possible fertilizer managements for improved pastures on the Northern Tablelands of N.S.W. The model successfully simulated pasture yield and clover content for a four-year superphosphate trial. It was used to calculate C and S fluxes between various pools for pastures with and without fertilizer S. Under a non-limiting P regime, which was S deficient, the model predicted a 3.6-fold increase in tops growth due to S fertilizaton, a 13-fold increase in sheep liveweight gain, and a 5-fold increase in wool production. These effects were due to a greater proportion of assimilate contributing to tops growth, and a much higher proportion of clover in the diet. 相似文献