Mapping multiple plant species abundance patterns - A multiobjective optimization procedure for combining reflectance spectroscopy and species ordination

Nature conservation and ecological restoration crucially depends on the knowledge about spatial patterns of plant species that control habitat conversion and disturbance regimes. Especially, species abundances are capable of indicating early development tendencies for setting habitat management strategies. This study demonstrates the transfer of field spectroscopy to hyperspectral imagery to map multiple plant species abundances in an open dryland area using two imaging spectrometers in two different phenological phases. We show that species abundances can partially be described by multiple gradients forming different coordinates in a contour map. For this purpose, species abundances were projected into an ordination space using non-metric multidimensional scaling and subsequent spatial interpolation. It was demonstrated that different gradients can be modeled in a Partial Least Squares regression framework resulting in distinct spectral features for certain gradient directions. We combine both objectives in a multiobjective NSGA-II procedure to maximize the quantitative determination of species abundance in ordination and spectral predictability in related field spectra, simultaneously. NSGA-II was finally used to select optimal spectral models for n = 35 single species that were transferred to hyperspectral imagery for mapping purpose. We can show that abundance predictabilities can be evaluated on the basis of individual model performances that hold different spectral features for each species in a designated phenological phase. Finally, we present spatially explicit multi-species maps for the best n = 18 and abundance maps for n = 8 models that could be linked to patterns of species richness, coexistence, succession stages and habitat type conditions.     

Impacts of forest gaps on butterfly diversity in a Bornean peat-swamp forest

Forest degradation is leading to widespread negative impacts on biodiversity in South-east Asia. Tropical peat-swamp forests are one South-east Asian habitat in which insect communities, and the impacts of forest degradation on them, are poorly understood. To address this information deficit, we investigated the impacts of forest gaps on fruit-feeding butterflies in the Sabangau peat-swamp forest, Central Kalimantan, Indonesia. Fruit-baited traps were used to monitor butterflies for 3 months during the 2009 dry season. A network of 34 traps (n_gap = 17, n_shade = 17) was assembled in a grid covering a 35 ha area. A total of 445 capture events were recorded, comprising 384 individuals from 8 species and 2 additional species complexes classified to genera. On an inter-site scale, canopy traps captured higher species richness than understory traps; however, understory traps captured higher diversity within each site. Species richness was positively correlated with percent canopy cover and comparisons of diversity indices support these findings. Coupled with results demonstrating morphological differences in thorax volume and forewing length between species caught in closed-canopy traps vs. those in gaps, this indicates that forest degradation has a profound effect on butterfly communities in this habitat, with more generalist species being favored in disturbed conditions. Further studies are necessary to better understand the influences of macro-habitat quality and seasonal variations on butterfly diversity and community composition in South-east Asian peat-swamp forests.     

Carrion beetles succession in three different habitats in Riyadh,Saudi Arabia

A main objective of the study is the establishment of a forensic entomological database for Riyadh, Saudi Arabia. Decomposition processes and beetle succession were analysed on rabbit carcasses in three different habitats (agricultural, desert and urban) in the period from May to July 2014. Due to the effects of the high temperature at the study sites, carrion reached the dry stage within 12 days in the agricultural habitat, and 6 days in the desert and urban habitats. A total of 125 beetles belonging to eight species and five families were collected during the decaying process, with their abundances increasing from the fresh to decay stages. The prevailing species belonged to the families of Dermestidae and Histeridae. It was not possible to confirm any definitive relationship between the occurrence of a single species and a particular stage of decomposition. The beetle communities were also not distinctively different between desert and urban habitats, but a distinct community was evident in the agriculture habitat. In addition, there were distinct beetle communities between the decay stage and the other stages. The dry stage recorded the lowest number of beetles. This study indicated that, the habitat type had an effect on the decay process and the abundance rate of the beetles.     

Adult odonate abundance and community assemblage measures as indicators of stream ecological integrity: A case study

Water resources demand constant conservation actions due to several problems (e.g. riparian vegetation cut-off, construction of dams, acidification, sewage and pesticide spills) that degrade the aquatic systems worldwide and affect its physicochemical parameters and habitat characteristics. Odonata is a potential group of organisms that could indicate these habitat alterations once they have aquatic and terrestrial life forms. In this study, we tested the use of adult odonate individual species and community assemblage measures to evaluate the effect of riparian vegetation cut-off and sewage discharges. The study was performed at Turvo Sujo River, in Viçosa, Southern Brazil. We selected twelve sites, six of them were upstream and six were downstream the city. Species abundance and species richness estimates of adult odonates were performed on sunny days during summer and winter. We analyzed the goodness-of-fit of the species abundances to geometric and lognormal series. We also measured the Habitat Physical Integrity Score (HPIS), pasture and forest proportions and physicochemical water parameters at each site. Only few species were abundant in up- and downstream regions. Abundance of Argia modesta was higher at the upstream (t = 3.188; df = 17; p = 0.005) than at the downstream region and this species is a potential habitat bioindicator organisms. Species richness was statistically different only in the wet season and species–abundance relations at the two regions fitted well to both geometric and lognormal series. The lack of riparian vegetation indicates a loss of habitat integrity and heterogeneity at Turvo Sujo River basin, which was mainly dominated by lake-dwelling odonate species. Low species richness differences are caused by species pool biases toward those ones capable to survive at degraded ecosystems, suggesting that the effects of water parameters are much less important than a landscape dominated by pastures and practically without forests. We suggest the use of species–abundance models (like geometric and lognormal series) to determine the degree of impacts over a given community once they are simple models and can show intrinsic processes structuring communities.     

Habitat characteristics and trophic structure of benthic macroinvertebrates in a forested headwater stream

Three channel reaches with different habitat characteristics were selected to test the variability in community structure of benthic macroinvertebrates by comparing the relative abundance of functional feeding groups among the reaches. The important factors influencing the spatial and temporal organization of community structure were explored using nonmetric multidimensional scaling (NMS). The habitat characteristics in the reaches were different in terms of habitat type, hydrological factors, and substrate composition. The first headwater reach was classified as a step-pool reach with similar relative areas of riffle and pool habitats. The second mid-reach and the third down reach had greater areas of pool habitat followed by runs and riffles whose proportions were similar between the latter two reaches. The relative abundances of functional feeding groups were different among the surveyed reaches. Gammarid shredders predominated in the upper reach, and chironomid collector–gatherers and collector–filterers were in greater abundance in the two lower reaches. The proportions of gammarids were minor in the mid and downstream reaches. NMS ordination indicated that the proportion of substrates < 8 mm, discharge, and water depth mainly determined the spatial and temporal distribution of samples based on the macroinvertebrate community in the study reaches. These results suggest that different habitat characteristics result in a distinct community structure in each reach.     

Investigating habitat-specific plant species pools under climate change

We used 474 European plant species to analyse the impacts of climate and land-use change on the composition of habitat-specific species pools in Germany. We quantified changes in the probability of occurrence of species in a grid cell using an ensemble of three statistical modelling techniques, namely generalized linear models (GLMs), generalized additive models (GAMs) and random forests (RFs), under three scenarios (average change +2.2, +2.9, and +3.8 °C up to 2080). We evaluated the impact on single species occurrence and resulting species pools considering their affiliation to ten major terrestrial habitat types in both current (1961–90) and future projections (2051–80). Current habitat-specific species pools declined in size across all scenarios, e.g. by 24 ± 13% (mean ± s.d.) under the most severe scenario. We show that species responses may strongly vary among scenarios and different habitats with a minimum average projected range loss of 14% (±18%; species typical to urban habitats under moderate climate change assumptions, average temperature increase +2.2 °C) to a maximum average projected range loss of 56% (±29%; species assemblages from mountain communities below the alpine zone at +3.8 °C). A separate analysis of species composition in habitat-specific species pools revealed a significant interaction between the scenario and the major habitat classes. We found a higher risk for habitat types with high conservation value characterised by a significant association between number of nationally endangered species and projected range loss in major habitats. Thus, habitat-specific management and application of measures favouring dispersal are required for mitigation of climate change impacts.     

Habitat fragmentation determines diversity of annual plant communities at landscape and fine spatial scales

The aim of this study was to disentangle the effects of landscape configuration (i.e., fragment area, connectivity, and proximity to a busy highway) on the assembly of annual plant communities at different spatial scales. Our main hypothesis was that larger and more connected fragments would have higher species densities per plot and this may result in differences in turnover and nestedness patterns at the fine spatial scales where plants interact. Specifically, since Mediterranean annuals are known to form strong competitive hierarchies, we expected to find a nested pattern of beta diversity due to sequential species loss. The study area was a fragmented gypsum habitat in central Spain with a semiarid climate where two fragmentation drivers coexist: agricultural practices and a roadway. Larger fragments had higher species densities per plot (20 × 20 m). Nevertheless, we detected no effect on the species assembly at fine spatial scales (30 × 30 cm). However, when the fragment connectivity was high the species that appeared in poor quadrats (30 × 30 cm) comprised a subset of the species in rich quadrats. These results agree well with the establishment of strong competitive hierarchies among annual species. The distance to the highway influenced the identity of the species established in the community (i.e., species composition) at fine spatial scales, but we detected no effect on species turnover, nestedness, or species densities. The main conclusion of our study is that the effects of habitat fragmentation extend beyond the landscape scale and they determine the spatial assembly at fine spatial scales.     

Modelling benthic habitats and biotopes off the coast of Norway to support spatial management

Habitat conservation, and hence conservation of biodiversity hinges on knowledge of the spatial distribution of habitats, not least those that are particularly valuable or vulnerable. In offshore Norway, benthic habitats are systematically surveyed and described by the national programme MAREANO (Marine AREAl database for NOrwegian waters). Benthic habitats and biotopes are defined in terms of the species composition of their epibenthic megafauna. Some habitats are of special conservation interest on account of their intrinsic value and/or vulnerability (e.g., long-lived species, rareness, to comply with international regulations such as OSPAR). In Norway, off Nordland and Troms, the following habitats of special interest can be found: Umbellula encrinus Stands, Radicipes sp. Meadows, Deep Sea Sponge Aggregations, Seapen and Burrowing Megafauna Communities, Hard Bottom Coral Gardens. In this paper, we used underwater video data collected within the MAREANO programme to define and describe benthic habitats and biotopes of special interest, and to map the geographic distribution thereof by means of habitat modelling.We first evaluated the community structure of each habitat in the list using a SIMPROF test. We determined that the class Deep Sea Sponge Aggregations, as defined by OSPAR, had to be split into at least three classes. We then re-defined seven new types of ecological features, including habitats and biotopes that were sufficiently homogeneous. Then we modelled the spatial distributions of these habitats and biotopes using Conditional Inference Forests. Since the purpose of the distribution maps is to support spatial planning we classified the heat maps using density thresholds.The accuracy of models ranged from fair to excellent. Hard Bottom Coral Gardens were the most rare habitat in terms of total area predicted (224 km², 0.3% of the area modelled), closely followed by Radicipes Meadows (391 km², 0.6%). Soft Bottom Demosponges (Geodid sponges and other taxa) represent the largest habitat, with a predicted area of 9288 km² (14%). Distribution maps of classes defined by habitat-forming species (Hard Bottom Coral Gardens) were more reliable than those defined by a host of species, or where no single species was a clear habitat provider (e.g. Seapen and Burrowing Megafauna Communities). We also put forward that a scale of patchiness larger than the scale of observation, and homogeneity of the community both play a role in model performance, and hence in map usefulness. These along with density threshold values based on observed data should all be taken into account in marine classifications and habitat definitions.     

Recovery of ciliate communities from an oligotrophic mountain stream after a catastrophic wind damage

We studied the recovery of ciliate taxoceonoses in a mountain stream after a catastrophic windstorm that strongly affected mountainous regions of Slovakia in 2004. To this end, we analyzed changes in the community structure of ciliate assemblages from the Zubrovica stream in the Low Tatra Mts during the time frame between 2003 and 2008 by various statistical methods, including diversity and similarity indices, hierarchical clustering, multidimensional scaling, and PCA. The climax ciliate communities were characteristic for oligotrophic running waters, i.e., they were equitable (E_H = 0.75–1.00) and harbored a comparatively low number of species (2–9) with typically low abundances (10–125 ind./ml). However, the community structure changed dramatically after the devastating windstorm. There was a significant increase of species number (10–30) and abundance (260–1480 ind./ml), concomitant with a decrease of the equitability (E_H = 0.43–0.83). These changed quantitative and qualitative community parameters wore off comparatively quickly, i.e., about six months after the catastrophic windstorm, the ciliate taxocoenoses had reached a community structure similar to that before the wind damage. The present observations and those from terrestrial habitats indicate that ciliate communities have a good capability to comparatively quickly reach a climax even after a strong disturbance.     

Focal species diversity patterns can provide diagnostic information on plant invasions

In Europe, coastal sandy habitats are considered highly endangered among those included in the EC Directive 92/43/EEC (Habitats Directive). Among the different threats which affect coastal communities, the spread of alien plants has been claimed to induce changes in community diversity and structure. We therefore set out to analyse diversity patterns of native and focal species (diagnostic and characteristic of coastal dune habitats of European conservation interest) in sandy coastal habitats invaded by Carpobrotus aff. acinaciformis, a widespread alien plant. Focal species are a major conservation target for the Habitats Directive and their decline should be considered a serious threat for the whole habitat. The study was performed in the Central Western coast of Italy. We randomly sampled the vegetation of the holocenic dune by 2 m × 2 m plots. First we split the collected data in two sets: invaded and non-invaded. We compared overall native and focal species richness patterns of the two sets by rarefaction curves. Then, in order to describe the singular aspects of species diversity (e.g. richness, Shannon index, Simpson index, Berger–Parker index), we also compared Rènyi's diversity profiles and we tested the significance of the differences between invaded and non invaded sets using a bootstrap procedure. Rarefaction curves of the non-invaded set rise quickly and reach higher accumulation values than the invaded set, but differences between the two curves were not significant. With respect to Rènyi's profiles, the profile for the invaded dataset was always below the non-invaded one, but differences in diversity were significant only when specifically considering the focal species (Shannon, Simpson and Berger–Parker indices). In the analysed case, the invasion is significantly associated with changes in focal species diversity, instead those differences are not evident on the all native species pool. In the case of recent invasions, a consistent decline on focal species diversity may represent an early alarm sign of diversity loss and may help define specific conservation actions to prevent the decrease of overall diversity.     

Vegetation mapping and multivariate approach to indicator species of a forest ecosystem: A case study from the Thandiani sub Forests Division (TsFD) in the Western Himalayas

QuestionsDoes the plant species composition of Thandiani sub Forests Division (TsFD) correlate with edaphic, topographic and climatic variables? Is it possible to identify different plant communities in relation to environmental gradients with special emphasis on indicator species? Can this approach to vegetation classification support conservation planning?LocationThandiani sub Forests Division, Western Himalayas.MethodsQuantitative and qualitative characteristics of species along with environmental variables were measured using a randomly stratified design to identify the major plant communities and indicator species of the Thandiani sub Forests Division. Species composition was recorded in 10 × 2.5 × 2 and 0.5 × 0.5 m square plots for trees, shrubs and herbs, respectively. GPS, edaphic and topographic data were also recorded for each sample plot. A total of 1500 quadrats were established in 50 sampling stations along eight altitudinal transects encompassing eastern, western, northern and southern aspects (slopes). The altitudinal range of the study area was 1290 m to 2626 m above sea level using. The relationships between species composition and environmental variables were analyzed using Two Way Cluster Analysis (TWCA) and Indicator Species Analysis (ISA) via PCORD version 5.ResultsA total of 252 plant species belonging to 97 families were identified. TWCA and ISA recognized five plant communities. ISA additionally revealed that mountain slope aspect, soil pH and soil electrical conductivity were the strongest environmental factors (p ≤ 0.05) determining plant community composition and indicator species in each habitat. The results also show the strength of the environment-species relationship using Monte Carlo procedures.ConclusionsAn analysis of vegetation along an environmental gradient in the Thandiani sub Forests Division using the Braun-Blanquet approach confirmed by robust tools of multivariate statistics identified indicators of each sort of microclimatic zones/vegetation communities which could further be used in conservation planning and management not only in the area studied but in the adjacent regions exhibit similar sort of environmental conditions.     

Structural and functional losses in macroalgal assemblages in a southeastern Brazilian bay over more than a decade

Changes in macroalgae assemblages over more than a decade are described for Sepetiba Bay, Brazil. Variations in macroalgae abundances and functional diversity were compared with older data to test the hypothesis that their diversity decreases following anthropogenic stress that negatively impact environmental characteristics. Four field sampling excursions were undertaken at two different sites from December/2012 to May/2014. Destructive sampling per effort used six box cores (25 × 25 cm) distributed randomly along a shallow sublittoral rocky shore. Biomass was used to quantify macroalgae assemblages identified to the species level. Multivariate analyses demonstrated decreases in total biomass at both sites as well as changes in community physiognomies. The predominant corticated algae found were classified as Ecological Status Group IIA, characteristic of sites in the process of degradation and indicating that anthropogenic stress had negatively affected the macroalgae communities as evaluated by the Ecological Evaluation Index.     

Bacteriocidal effects of brevetoxin on natural microbial communities

The sensitivity of bacteria to the marine neurotoxins, brevetoxins, produced by the dinoflagellate Karenia brevis and raphidophytes Chattonella spp. remains an open question. We investigated the bacteriocidal effects of brevetoxin (PbTx-2) on the abundance and community composition of natural microbial communities by adding it to microbes from three coastal marine locations that have varying degrees of historical brevetoxin exposure: (1) Great Bay, New Jersey, (2) Rehoboth Bay, Delaware and (3) Sarasota Bay, Florida. The populations with limited or no documented exposure were more susceptible to the effects of PbTx-2 than the Gulf of Mexico populations which are frequently exposed to brevetoxins. The community with no prior documented exposure to brevetoxins showed significant (p = 0.03) changes in bacterial abundance occurring with additions greater than 2.5 μg PbTx-2 L⁻¹. Brevetoxin concentrations during K. brevis blooms range from ∼2.5 to nearly 100 μg L⁻¹ with typical concentrations of ∼10–30 μg L⁻¹. In contrast to the unexposed populations, there was no significant decrease in bacterial cell number for the microbial community that was frequently exposed to brevetoxins, which implies variable sensitivity in natural communities. The diversity in the bacterial communities that were sensitive to PbTx-2 declined upon exposure. This suggests that the PbTx-2 was selecting for or against specific species. Mortality was much higher in the 200 μg PbTx-2 L⁻¹ treatment after 48 h and >37% of the species disappeared in the bacterial communities with no documented exposure. These results suggest that toxic red tides may play a role in structuring bacterial communities.     

Community assembly and biomass production in regularly and never weeded experimental grasslands

We studied the natural colonisation of new species in experimental grasslands varying in plant species richness (from 1 to 60) and plant functional group richness (from 1 to 4) in either regularly or never weeded subplots during the first 3 years after establishment. Sown species established successfully, with no differences in species richness or their relative abundances between the regularly and never weeded subplots during the study period. Aboveground biomass of sown species increased with increasing sown species richness in both treatments. While a positive relationship between sown species richness and total aboveground biomass (including colonising species) existed in the 2nd year after sowing in the regularly and never weeded subplots, this positive relationship decayed in the 3rd year in the never weeded subplots because of a higher biomass of colonising species in species-poor mixtures. Total aboveground biomass varied independently of total species richness 3 years after sowing in both treatments. Jaccard similarity of coloniser species composition between regularly and never weeded subplots decreased from the 2nd to the 3rd year, indicating a divergence in coloniser species composition. Coloniser immigration and turnover rates were higher in regularly weeded subplots, confirming that weeding counteracts species saturation and increases the chance that new colonisers would establish. Although our study shows that low diversity plant communities are unstable and converge to higher levels of biodiversity, the effects of initially sown species on community composition persisted 3 years after sowing even when allowing for succession, suggesting that colonising species mainly filled empty niche space.     

The importance of relative humidity and trophic resources in governing ecological niche of the invasive carabid beetle Merizodus soledadinus in the Kerguelen archipelago

Comprehensive studies to identify species-specific drivers of survival to environmental stress, reproduction, growth, and recruitment are vital to gaining a better understanding of the main ecological factors shaping species habitat distribution and dispersal routes. The present study performed a field-based assessment of habitat distribution in the invasive carabid beetle Merizodus soledadinus for the Kerguelen archipelago. The results emphasised humid habitats as a key element of the insect’s realised niche. In addition, insects faced food and water stress during dispersal events. We evaluated quantitatively how water availability and trophic resources governed the spatial distribution of this invasive predatory insect at Îles Kerguelen. Food and water stress survival durations [in 100%, 70%, and 30% relative humidity (RH) conditions] and changes in a set of primary metabolic compounds (metabolomics) were determined. Adult M. soledadinus supplied with water ad libitum were highly tolerant to prolonged starvation (LT₅₀ = 51.7 ± 6.2 d). However, food-deprived insect survival decreased rapidly in moderate (70% RH, LT₅₀ = 30.37 ± 1.39 h) and low (30% RH, LT₅₀ = 13.03 ± 0.48 h) RH conditions. Consistently, body water content decreased rapidly in insects exposed to 70% and 30% RH. Metabolic variation evidenced the effects of food deprivation in control insects (exposed to 100% RH), which exhibited a progressive decline of most glycolytic sugars and tricarboxylic acid cycle intermediates. Most metabolite levels were elevated levels during the first few hours of exposure to 30% and 70% RH. Augmented alanine and lactate levels suggested a shift to anaerobic metabolism. Simultaneously, peaks in threonine and glycolytic sugars pointed to metabolic disruption and a progressive physiological breakdown in dehydrating individuals. Overall, the results of our study indicate that the geographic distribution of M. soledadinus populations is highly dependent on habitat RH and water accessibility.     

Exploring the compass of potential changes induced by climate warming in plant communities

New models are required to predict the impacts of future climate change on biodiversity. A move must be made away from individual models of single species toward approaches with synergistically interacting species. The focus should be on indirect effects due to biotic interactions. Here we propose a new parsimonious approach to simulate direct and indirect effects of global warming on plant communities. The methodology consists of five steps: a) field survey of species abundances, b) quantitative assessment of species co-occurrences, c) assignment of a theorised effect of increased temperature on each species, d) creation of a community model to project community dynamics, and e) exploration of the potential range of temperature change effects on plant communities.We explored the possible climate-driven dynamics in an alpine vegetation community and gained insights into the role of biotic interactions as determinants of plant species response to climate change at local scale. The study area was the uppermost portion of Alpe delle Tre Potenze (Northern Apennines, Italy) from 1500 m up to the summit at 1940 m.Our work shows that: 1) unexpected climate-driven dynamics can emerge, 2) interactive communities with indirect effects among species can overcome direct effects induced by global warming; 3) if just one or few species react to global warming the new community configuration could be unexpected and counter-intuitive; 4) timing of species reactions to global warming is an important driver of community dynamics; 5) using simulation models with a limited amount of data in input, it is possible to explore the full range of potential changes in plant communities induced by climate warming.     

Evaluation of stream ecosystem health and species association based on multi-taxa (benthic macroinvertebrates,algae, and microorganisms) patterning with different levels of pollution

Benthic communities of macroinvertebrates, algae, and microorganisms were concurrently collected using a Surber sampler (30 × 30 m²; 300 μm mesh), brush (5 × 5 cm²), and syringe (100 mL; Denaturing Gradient Gel Electrophoresis), respectively, to determine the ecological integrity of streams with different levels of pollution. Macroinvertebrates provided a clearer representation of the gradient of pollution, while a broader scope of species distribution was observed for algae and microorganisms, including sites severely polluted with heavy metals. Species associations among different taxa were presented on the Self-Organizing Map (SOM) and Nonmetric Multidimensional Scaling (NMDS) based on environmental factors. After screening, indicator species visualized on the SOM represented a wider range of environmental impacts and were more illustrative with benthic macroinvertebrates in least polluted sites. In contrast NMDS presented species more closely associated with overall variance of communities with severe pollution, mainly in microorganisms and algae. Multi-taxa community analysis using SOM and NMDS in combination would provide a comprehensive assessment for addressing ecological integrity in streams.     

Taxonomic diversity and community structure of arbuscular mycorrhizal fungi (Phylum Glomeromycota) in three maritime sand dunes in Santa Catarina state,south Brazil

Community structure and species richness of arbuscular mycorrhizal fungi (Phylum Glomeromycota) were studied in sand dune sites at Itapiruba (southern), Joaquina (intermediate) and Praia Grande (northern) beaches along the coast of the state of Santa Catarina, Brazil. In each site, a 20 × 20 m plot was established and 20 soil samples collected in a regular grid pattern. Fungal spores were extracted from each sample, counted and identified to species level. A total of 25 species were recovered belonging to seven genera and five families in the Glomeromycota. Gigaspora albida and Acaulospora scrobiculata occurred in >50 % of samples at all three sites. Other common species whose sample frequency was >50 % in one or two sites were Scutellospora weresubiae, Scutellospora cerradensis and Racocetra gregaria, while the remaining majority of species were detected in <25 % of samples within a given site. Dune sites could be differentiated based on the higher frequency of occurrence of S. cerradensis and Acaulospora morrowiae in Itapiruba, S. weresubiae in Joaquina, and Scutellospora hawaiiensis in Praia Grande. No differences across sites were observed for species richness and total spore numbers, the latter averaging from 28.8 to 31.8 spores per 100 ml soil. Shannon diversity was significantly higher in Praia Grande compared to the other two sites. Differences in the relative spore abundance of genera among dunes were detected only for Scutellospora, which was significantly more abundant in the Joaquina beach. Community structure, as depicted by species rank/log abundance graphs, was not significantly different between areas according to the Kolmogorov–Smirnov two-sample test. Species accumulation curves demonstrated that 13 samples were enough to detect 90 % of all species. Overall, sand dune systems share similar arbuscular mycorrhizal fungal communities despite being geographically distant (150 km) from each other.     

Multivariate approach to the classification and ordination of the forest ecosystem of Nandiar valley western Himalayas

QuestionsDoes the vegetation composition of the forests of Nandiar Valley correlate with climatic, topographic and edaphic variables? Is it possible to identify plant communities through indicator species in relation to environmental gradients? Can this approach of classification and ordination will be helpful for conservation planning?LocationForests of Nandiar Valley, Moist temperate Western Himalayas Pakistan.MethodsEighty stands were selected for quantitative and qualitative characteristic of vegetation between an elevations of 525–3817 m. Species composition was recorded by using 400 m long transects. GPS, climatic, edaphic and topographic data were recorded for each sampling site. The relationship between habitat types, species composition and distribution along with climatic, edaphic and topographic variables were analyzed using TWINSPAN, Cluster analysis and DCA ordination.ResultsSum 325 vascular plants species belonging to 97 families were recorded. Diversity index and species richness was maximum in the moist temperate zone. Classification and ordination showed that the variance in species data was 7.07. Two-ways indicator species analysis classified the vegetation into eight plant communities. Indicator species analysis revealed that slope aspect, wind speed, temperature, dew point, wet bulb, pH, organic matter and phosphorous were the strongest parameters (p ≤ 0.05) determining plant community composition and indicator species in each habitat. The results also show the strength of the environment – species relationship using Monte Carlo procedures. DCA ordination grouped different species having similar habitat and habitats having common species.ConclusionsThe multivariate analysis of the vegetation along with environmental variables of Nandiar valley confirmed the indicators of each sort of vegetation communities/microclimatic zones which could further be used in conservation planning and management not only in studied area but also in the adjacent regions as well as in the areas exhibit similar sort of climatic, edaphic and topographic conditions.