隔指孢属分类评述及其一新种

本文报道了隔指孢属(Dactylella Grove)一新种—云南隔指孢(D. yunnanensis);并对隔指孢属的分类进行了评述;重新修订了隔指孢属的特征。列出了捕食和非捕食种类共计34种。其中包括了6个新组合,并制作了检索表。     

高寒草甸种间性状差异和物种均匀度对物种多样性与功能多样性关系的影响

物种多样性(SD)与功能多样性(FD)之间存在多种关系,但由于生态系统功能主要由物种的功能属性决定,因而功能多样性对生态系统功能的影响大于物种多样性的影响。但在种间性状差异和物种均匀度这两个构成功能多样性的基本成分中,何者对功能多样性影响更大,并进而决定SD-FD关系尚不明确。通过在高寒矮嵩草(Kobresia humilis)草甸为期6a的刈割(留茬1 cm、3 cm及不刈割)和施肥(尿素7.5 g m~(-2)a~(-1)+磷酸二胺1.8 g m~(-2)a~(-1)、不施肥)控制实验,研究了种间性状差异(33个物种13个性状)和物种均匀度(所有物种)对物种多样性(所有物种)与功能多样性(33个物种13个性状)之间关系的影响。研究结果显示:(1)物种多样性与功能多样性正相关,它们与多性状种间差异负相关,而与物种均匀度正相关。物种均匀度是导致功能多样性变化的主要因素,也是导致SD-FD正相关的原因,这是因为随着物种多样性增加,物种均匀度的增加程度大于多性状种间差异的减少程度,因而功能多样性增加,SD-FD正相关;(2)功能多样性指数(FD_(Rao)和FDis)随物种多样性指数(H')减速递增,表明群落存在一定的功能冗余,且功能冗余随物种多样性的增大而增大,但尚未达到产生SD-FD无相关性的极限H'值;(3)功能多样性对高寒草甸生态系统地上净初级生产力(ANPP)的影响大于物种多样性的影响,二元线性回归显示在同时考虑二者对ANPP的影响时,可排除物种多样性的作用。但由于物种多样性下降或物种丧失引起的物种功能性状丢失或性状空间维度减小将导致功能多样性降低,表明它们之间存在一定互补性,在研究生物多样性与生态系统功能关系时,同时考虑物种多样性和功能多样性的影响仍十分必要。     

Constant association of ophiostomatoid fungi with the bark beetle <Emphasis Type="Italic">Ips subelongatus</Emphasis> invading Japanese larch logs

Ceratocystiopsis, Ceratocystis, Grosmannia, and Ophiostoma species were isolated from Ips subelongatus and beetle-infested Japanese larch logs collected at several areas in central and northern Honshu Island, Japan, to determine constant associates of I. subelongatus. Ceratocystiopsis minuta, two species of Ceratocystis, three species of Grosmannia, and four species of Ophiostoma were isolated. Of the fungi isolated in the present study, G. laricis, O. brunneociliatum, and O. piceae were constant associates of the beetles. Ceratocystis fujiensis, Ceratocystiopsis minuta, and Ophiostoma sp. F were occasionally isolated with high frequencies of occurrence but were not consistent associates. Ceratocystis fujiensis was most often isolated as the leading fungal invasion in the sapwood of Japanese larch logs invaded by I. subelongatus, confirming that the fungus acts as a primary invader of sapwood in beetle-attacked logs. Contribution No. 221, Laboratory of Plant Parasitic Mycology, Graduate School of Life and Environmental Sciences, University of Tsukuba     

膜叶铁角蕨属的形态系统学研究

膜叶铁角蕨属隶属于铁角蕨科,全世界约有30种,我国分布有18种,是该属植物的分布中心之一。到目前为止,膜叶铁角蕨属的物种数目和物种分类还存在很大争议,一些物种的界限和定义还模糊不清,为了得到一个自然的膜叶铁角蕨属分类系统,还需要对膜叶铁角蕨属的物种分类做进一步研究。该文在前人研究的基础上,对膜叶铁角蕨属10种植物的形态特征,包括孢子形态特征、叶柄和根状茎上的鳞片形态特征、叶片形态、羽片形状以及叶脉特征等进行详细观察分析,探讨了各个形态特征间的关系以及膜叶铁角蕨属植物的物种分类。结果表明:膜叶铁角蕨属植物的叶片及羽片等形态特征存在很大区别,叶柄和根状茎上的鳞片以及孢子形态的种间差异虽然不大,但其在大小、形状、颜色等方面的细微差别仍可作为部分种类的鉴定依据。该研究结果为膜叶铁角蕨属植物的物种分类及进一步研究提供了重要依据。     

香港鹅耳枥(桦木科)的群落特征

为保护香港特有植物香港鹅耳枥,基于典型样地调查,对香港鹅耳枥所在群落进行了研究。结果表明,在225 m2的样地内,有维管植物37科66属68种。建群种为香港鹅耳枥,个体高度最高3 m,所在群落植株平均高度0.92 m,分层不明显。位于中国香港岛的香港鹅耳枥处于衰退状态,小个体极少。因此,建议采取就地保护和迁地保护措施,以重建种群。     

Native and exotic Amphipoda and other Peracarida in the River Meuse: new assemblages emerge from a fast changing fauna

Samples issued from intensive sampling in the Netherlands (1992–2001) and from extensive sampling carried out in the context of international campaigns (1998, 2000 and 2001) were revisited. Additional samples from artificial substrates (1992–2003) and other techniques (various periods) were analysed. The combined data provide a global and dynamic view on the Peracarida community of the River Meuse, with the focus on the Amphipoda. Among the recent exotic species found, Crangonyx pseudogracilisis regressing, Dikerogammarus haemobaphesis restricted to the Condroz course of the river, Gammarus tigrinusis restricted to the lowlands and seems to regress, Jaera istriis restricted to the ‘tidal’ Meuse, Chelicorophium curvispinumis still migrating upstream into the Lorraine course without any strong impact on the other amphipod species. After a rapid expansion Dikerogammarus villosushas continued its upstream invasion between 1998 and 2002 at a rate of 30–40 km per year, but no further progression was noticed in 2003. Locally and temporarily the native species (Gammarus fossarum and G. pulex) and naturalized species (G. roeseliand Echinogammarus berilloni)mayhave been excluded by the most recent invaders (mainly D. villosus), but none of the native and naturalized species has disappeared completely. Therefore, the number of amphipod species found in the River Meuse has increased. Moreover, the native and naturalized species keep on dominating the tributaries from which the recent invaders seem to be excluded. A changing Peracarida community structure is observed along the course of the River Meuse: four native or naturalized species inhabit the upstream (Lorraine) course, three invasive species dominate in the middle reach (Ardenne-Condroz zone), one exotic species is housed in the Border Meuse and three or four invasive species dominate the assemblages in the lowlands.     

Multiple gene genealogies and species recognition in the ectomycorrhizal fungus Paxillus involutus

Paxillus involutus (basidiomycetes, Boletales) is a common ectomycorrhizal fungus in the Northern Hemisphere. The fungus displays significant variation in phenotypic characters related to morphology, physiology, and ecology. Previous studies have shown that P. involutus contains several intersterility groups and morphological species. In this study, we have used concordance of multiple gene genealogies to identify genetically isolated species of P. involutus. Fragments from five protein coding genes in 50 isolates of P. involutus collected from different hosts and environments in Europe and one location in Canada were analysed using phylogenetic methods. Concordance of the five gene genealogies showed that P. involutus comprises at least four distinct phylogenetic lineages: phylogenetic species I (with nine isolates), II (33 isolates), III (three isolates), and IV (five isolates). The branches separating the four species were long and well supported compared with the species internodes. A low level of shared polymorphisms was observed among the four lineages indicating a long time since the genetic isolation began. Three of the phylospecies corresponded to earlier identified morphological species: I to P. obscurosporus, II to P. involutus s. str., and III to P. validus. The phylogenetic species had an overlapping geographical distribution. Species I and II differed partly in habitat and host preferences.     

Macaranga and Mallotus species (Euphorbiaceae) as indicators for disturbance in the mixed lowland dipterocarp forest of East Kalimantan (Indonesia)

The indicator value (IV) of Macaranga and Mallotus species (Euphorbiaceae) for different types of disturbance in lowland dipterocarp forest was assessed by counting and identifying all individuals of species of these genera taller than 30 cm in 45 (10 m×300 m) plots at nine locations. Twelve Macaranga and nine Mallotus species were found. The main forest disturbance types (primary forest, secondary forest, selectively logged forest, forest burned once, and repeatedly burned forest used for shifting-cultivation) each had their own set of indicator species. The level of disturbance in the forest types was assessed by measuring nine forest structural parameters. The occurrence of Macaranga and Mallotus species was closely related to the level of disturbance in a forest. Most Macaranga species were characteristic of high disturbance levels, while most Mallotus species preferred intermediate to low levels of disturbance. However, both genera had species at both disturbance extremes. Using multiple regression analysis, combinations of Macaranga and Mallotus species were formed and used to predict the separate forest structural parameters and the general level of disturbance of a forest. The Macaranga and Mallotus species could be grouped into (1) primary forest ‘remnant’ species; (2) generalist pioneer species; and (3) high disturbance pioneer species.     

On some rust fungi (Uredinales) collected in an Acacia koa–Metrosideros polymorpha woodland, Mauna Loa Road, Big Island, Hawaii

Nine species of rust fungi (Uredinales) were found during a 1-day field study in an Acacia koa–Metrosideros polymorpha woodland in Volcanoes National Park on Big Island, Hawaii. Two species, both found on Acacia koa, are native (endemic) rusts whereas 7 species are nonnative on nonnative hosts, highlighting the high proportion of introduced species in the Hawaiian flora even in more or less natural habitats. One species, Uromyces linearis on Panicum repens, constitutes the first record of this rust for the Hawaiian archipelago, bringing the total to 93 species on the islands, 70 (75.3%) of which are introduced. The species records are annotated with emphasis on the geographic origin of each taxon. In addition, the study has led to the molecular reevaluation of the genus Racospermyces, indicating that it is synonymous with Endoraecium, and six new combinations are proposed for the species previously placed in Racospermyces. The high number of introduced species in Hawaii coupled with the paucity of native species when compared to other global regions is discussed.     

A new species of <Emphasis Type="Italic">Polygala</Emphasis> subgenus <Emphasis Type="Italic">Hebeclada</Emphasis> (Polygalaceae) from central Brazil

Polygala pauciramosa, a new species from the Federal District and the state of Goiás is described, illustrated, and compared with related species of Polygala subgenus Hebeclada. The new species is an herb that grows in seasonally to permanently wet savannas. A key to the species of Polygala subgenus Hebeclada from Goiás state, Brazil is provided.     

Independent origins of tetraploid cryptic species in the fern <Emphasis Type="Italic">Ceratopteris thalictroides</Emphasis>

Ceratopteris thalictroides (L.) Brongn is a tetraploid fern species that contains at least three cryptic species, the south, the north and the third type. In this study we combined data from both chloroplast DNA (cpDNA) and nuclear DNA sequences of three diploid species and three cryptic species of C. thalictroides to unravel the origin of the cryptic species, particularly of the reticulate relationships among the diploid and tetraploid taxa in the genus Ceratopteris. Of the three diploid species examined, C. cornuta had cpDNA identical to that of the tetraploid third type plants, and this diploid species is a possible maternal ancestor of the tetraploid third type. Analysis of the homologue of the Arabidopsis thaliana LEAFY gene (CLFY1) identified ten alleles in the genus Ceratopteris, with six alleles found in C. thalictroides. The unrooted tree of the CLFY1 gene revealed four clusters. Each cryptic species showed fixed heterozygosity at the CLFY1 locus and had two alleles from different clusters of the CLFY1 tree. Consideration of the cpDNA sequences, CLFY1 genotypes of the cryptic species and CLFY1 gene tree in concert suggested that the cryptic species of C. thalictroides had originated through independent allopolyploidization events involving C. cornuta and two unknown hypothetical diploid species.     

Nutrient requirements of exotic tree species in Zimbabwe

Pot and field experiments were conducted in the greenhouse and at three field sites (Marondera, Domboshawa and Makoholi) in Zimbabwe to examine the effects of soils and fertilizers on nutrient uptake and growth of 6 exotic tree species (Eucalyptus camaldulensis, E. grandis, E. tereticornis, Leucaena leucocephala, Casuarina cunninghamiana, and Acacia holosericea). Plant growth, N and P contents of all species were increased by the application of N, P, K and micronutrient fertilizers. The effect of individual nutrients (N, P, K and micronutrients) and their combination on Eucalyptus species was further investigated in a pot experiment using soil from Domboshawa. Eucalyptus species responded only to N application and no significant interactions were found between N and the other elements. Nutrient uptake results showed that E. camaldulensis and E. tereticornis removed more cations than the N-fixing trees but only in the fertilized treatments. L. leucocephala and C. cunninghamiana were higher in P, but no clear trends were observed for N. Plant growth and nutrient uptake by E. camaldulensis. C. cunninghamiana and A. holosericea were assessed in the field at the three sites. Plant species grown in the Marondera site had greater height and diameter at breast height (DBH) than those in the two other sites. These results followed trends in soil nutrient contents. The analysis of foliage revealed differences in the nutrient concentration of leaves from different trees, but no effect of site was found. The interrelationships between plant characteristics, soil and foliage nutrients were examined. In a pot experiment, mineral N was the only variable correlated with growth response and nutrient uptake, while in the field the only significant correlation was obtained with soil pH.     

Crossability relationships between Korean firs Abies koreana , A. nephrolepis and A. holophylla and some other representatives of the genus Abies

Artificial crossing experiments involving 3 Abies species native to Korean peninsula and 5 other representatives of Abies revealed a high hybridological affinity between Abies koreana and A. nephrolepis. Both these species are reproductively isolated from A. holophylla. All the three Korean species were found to exhibit incompatible relationships with the North American species A. concolor. The species A. holophylla and A. koreana differ also in their abilities to intercross with the Mediterranean firs. The former has been successfully crossed with A. nordmanniana, A. alba and A. cilicica exhibiting 19.1–55.3% crossability, whereas the latter produced filled seeds only with A. nordmanniana reaching 46.4% crossability. A considerable differentiation is postulated to exist between the pair of species A. koreana and A. nephrolepis on the one side and A. holophylla on the other side.     

<Emphasis Type="Italic">Kazachstania wufongensis</Emphasis> sp. nov., an ascosporogenous yeast isolated from soil in Taiwan

A new yeast species, Kazachstania wufongensis, is proposed in this paper based on six strains isolated from soil in Taiwan. The species may produce one to four ellipsoidal ascospores in each ascus, directly transformed from diploid cells. Genus assignment and distinction of the species from other recognized species of Kazachstania is based on morphological and physiological characteristics, and on phylogenetic analysis of nucleotide sequences of the D1/D2 domains of the large subunit (LSU) rRNA gene. Sequence analysis of the D1/D2 domains of the LSU rRNA gene reveals that K. wufongensis is a member of the Kazachstania exigua complex, and its phylogenetically closest relatives are K. exigua, K. barnettii, K. bulderi, and K. turicensis. The species can be further differentiated from the other phylogenetically related species based on internal transcribed spacer sequence and electrophoretic karyotype. Therefore, the new species Kazachstania wufongensis sp. nov. is proposed. The type strain of this new species, which was isolated from forest soil in Wufong, Hsinchu, Taiwan, is FN21S03^T (=CBS 10886^T = BCRC 23138^T).     

马鞍菌属3个中国新记录

【背景】目前国内学者已发表60个马鞍菌属物种,但山西省尚缺乏马鞍菌属真菌分布的系统性报道。【目的】调查我国山西省马鞍菌属的种类组成及地理分布。【方法】采集标本,对其进行详细的形态特征描述,并提取DNA,测定热激蛋白(heat shock protein, hsp)和核糖体大亚基(large subunit, LSU)序列,基于贝叶斯法(Bayesian inference, BI)和最大似然法(maximum likelihood, ML)构建分子系统发育树。【结果】鉴定结果表明这3个马鞍菌属物种分别为类帽状马鞍菌(Helvella capucinoides)、丹麦马鞍菌(H. danica)和柔毛马鞍菌(H. pubescens)。它们在形态上与模式标本的描述基本一致。基于hsp和LSU的系统发育关系分析也支持形态学的鉴定结果。【结论】参考我国截至目前已报道的马鞍菌属物种,确定这3个种均为中国新记录种。     

基于可培养方法分析云南腾冲小空山火山谷芽胞杆菌分布特征

【目的】为了解云南腾冲小空山火山谷土壤中可培养芽胞杆菌种类分布特征。【方法】采用可培养手段对小空山火山谷阳坡、谷底和阴坡土壤中的芽胞杆菌进行分离培养,根据16S rRNA基因序列同源性对分离菌株进行鉴定,并分析系统发育地位。利用Canoco5软件分析采样点芽胞杆菌种类分布特征与土壤样品理化性质的相关性。【结果】从火山谷土壤样品中共分离获得180株芽胞杆菌,16S rRNA基因测序鉴定结果表明分离菌株隶属于芽胞杆菌纲2个科(芽胞杆菌科和类芽胞杆菌科)、6个属、34个种,其中芽胞杆菌属(Bacillus) 11个种,类芽胞杆菌属(Paenibacillus) 14个种,短芽胞杆菌属(Brevibacillus)3个种,赖氨酸芽胞杆菌属(Lysinibacillus)4个种,嗜冷芽胞杆菌属(Psychrobacillus)1个种和绿芽胞杆菌属(Viridibacillus)2个种,其中7个菌株与其最近模式菌株16SrRNA相似性低于种的界定阈值(98.65%),为芽胞杆菌潜在新物种。优势属为芽胞杆菌属和类芽胞杆菌属,优势种为蕈状芽胞杆菌(Bacillusmycoides),图瓦永芽胞杆菌(Bacillustoyonensis),蜡状芽胞杆菌(Bacilluscereus),解木糖赖氨酸芽胞杆菌(Lysinibacillusxylanilyticus),蜂房类芽胞杆菌(Paenibacillusalvei)和沙地绿芽胞杆菌(Viridibacillus arenosi)。其中16个种分离自阳坡,29个种分离自阴坡,9个种分离自谷底,三者共同种类为6种。阳坡、谷底和阴坡的芽胞杆菌种群分布Bray-Curtis相似性为62.4%,多样性分析结果表明,Shannon指数(H′)大小次序为阴坡阳坡谷底。环境因子分析发现,芽胞杆菌种群分布多样性特征与其土壤的海拔高度、碳氮比和硫含量呈负相关,而和碳源和氮源含量呈正相关。【结论】从以上结果得出,云南腾冲火山谷有着较为丰富的芽胞杆菌资源,且还存在可分离培养的芽胞杆菌的潜在新物种,为利用火山微生物资源提供了保障。     

New anamorphic yeast species: Candida infanticola sp. nov., Candida polysorbophila sp. nov., Candida transvaalensis sp. nov. and Trigonopsis californica sp. nov

Three new species of Candida and a new species of Trigonopsis are described based on their recognition from phylogenetic analysis of gene sequences from large subunit ribosomal RNA, ITS1/ITS2 rRNA, mitochondrial small subunit rRNA and cytochrome oxidase II. Candida infanticola sp. nov. (type strain NRRL Y-17858, CBS 7922) was isolated from the ear of an infant in Germany and is closely related to Candida sorbophila. Candida polysorbophila sp. nov. (type strain NRRL Y-27161, CBS 7317) is a member of the Zygoascus clade and was isolated in South Africa as a contaminant from an emulsion of white oil and polysorbate. Candida transvaalensis sp. nov. (type strain NRRL Y-27140, CBS 6663) was obtained from forest litter, the Transvaal, South Africa, and forms an isolated clade with Candida santjacobensis. Trigonopsis californica sp. nov. (type strain NRRL Y-27307, CBS 10351) represents a contaminant from wine in California, and forms a well-supported clade with Trigonopsis cantarellii, Trigonopsis variabilis and Trigonopsis vinaria.     

Genetic variation in Simocephalus (Anomopoda: Daphniidae) in North America: patterns and consequences

The presumption of intercontinental distributions of many species of Anomopoda has been reinforced by their considerable morphological uniformity and ease of passive dispersal via ephippial eggs. To test the validity of this dogma, genetic variation among taxa in the cladoceran genus Simocephalus was examined on a continental scale. Genetic variability (percentage polymorphic loci = 8.8%, individual heterozygosity = 3.4%) was comparable to that determined on a local scale in Simocephalus and somewhat less than for other zooplankton groups. Four species complexes were distinguished allozymically with unique allelic substitutions found for at least two loci between these taxa. Eight species in North America were differentiated within these complexes (Nei s genetic distance, D>0.30), all of which were clearly separated from two European species. Both S. cf. vetulus and S. cf. serrulatus are broadly distributed in North America, and intraspecific divergence is relatively low. In contrast, S. cf. congener and S. cf. exspinosus represent species complexes, both consisting of several species, differentiated allozymically and morphologically. The concept of generalist species with moderate genetic variation throughout a broad range and specialist species, genetically depauperate, with restricted distributions, is explored.     

柔毛赤车, 广西荨麻科一新种

描述了自广西西南部发现的荨麻科(Urticaceae)赤车属(Pellionia)一新种,柔毛赤车(P.mollissima)。此种的特征是其瘦果具短线纹和瘤状突起,据此果实特征,可将此种与赤车属的其他种相区别。     

柔毛赤车, 广西荨麻科一新种

描述了自广西西南部发现的荨麻科(Urticaceae)赤车属(Pellionia)一新种,柔毛赤车(P. mollissima)。此种的特征是其瘦果具短线纹和瘤状突起,据此果实特征,可将此种与赤车属的其他种相区别。