The annual cycles of CO2 and H2O exchange over a northern mixed forest as observed from a very tall tower

We present the annual patterns of net ecosystem‐atmosphere exchange (NEE) of CO₂ and H2O observed from a 447 m tall tower sited within a mixed forest in northern Wisconsin, USA. The methodology for determining NEE from eddy‐covariance flux measurements at 30, 122 and 396 m above the ground, and from CO₂ mixing ratio measurements at 11, 30, 76, 122, 244 and 396 m is described. The annual cycle of CO₂ mixing ratio in the atmospheric boundary layer (ABL) is also discussed, and the influences of local NEE and large‐scale advection are estimated. During 1997 gross ecosystem productivity (947?18 g C m^?2 yr^?1), approximately balanced total ecosystem respiration (963±19 g C m^?2 yr^?1), and NEE of CO₂ was close to zero (16±19 g C m^?2 yr^?1 emitted into the atmosphere). The error bars represent the standard error of the cumulative daily NEE values. Systematic errors are also assessed. The identified systematic uncertainties in NEE of CO₂ are less than 60 g C m^?2 yr^?1. The seasonal pattern of NEE of CO₂ was highly correlated with leaf‐out and leaf‐fall, and soil thaw and freeze, and was similar to purely deciduous forest sites. The mean daily NEE of CO₂ during the growing season (June through August) was ?1.3 g C m^?2 day^?1, smaller than has been reported for other deciduous forest sites. NEE of water vapor largely followed the seasonal pattern of NEE of CO₂, with a lag in the spring when water vapor fluxes increased before CO₂ uptake. In general, the Bowen ratios were high during the dormant seasons and low during the growing season. Evapotranspiration normalized by potential evapotranspiration showed the opposite pattern. The seasonal course of the CO₂ mixing ratio in the ABL at the tower led the seasonal pattern of NEE of CO₂ in time: in spring, CO₂ mixing ratios began to decrease prior to the onset of daily net uptake of CO₂ by the forest, and in fall mixing ratios began to increase before the forest became a net source for CO₂ to the atmosphere. Transport as well as local NEE of CO₂ are shown to be important components of the ABL CO₂ budget at all times of the year.     

Radon fluxes in tropical forest ecosystems of Brazilian Amazonia: night-time CO2 net ecosystem exchange derived from radon and eddy covariance methods

Radon‐222 (Rn‐222) is used as a transport tracer of forest canopy–atmosphere CO₂ exchange in an old‐growth, tropical rain forest site near km 67 of the Tapajós National Forest, Pará, Brazil. Initial results, from month‐long periods at the end of the wet season (June–July) and the end of the dry season (November–December) in 2001, demonstrate the potential of new Rn measurement instruments and methods to quantify mass transport processes between forest canopies and the atmosphere. Gas exchange rates yield mean canopy air residence times ranging from minutes during turbulent daytime hours to greater than 12 h during calm nights. Rn is an effective tracer for net ecosystem exchange of CO₂ (CO₂ NEE) during calm, night‐time hours when eddy covariance‐based NEE measurements are less certain because of low atmospheric turbulence. Rn‐derived night‐time CO₂ NEE (9.00±0.99 μmol m^?2 s^?1 in the wet season, 6.39±0.59 in the dry season) was significantly higher than raw uncorrected, eddy covariance‐derived CO₂ NEE (5.96±0.51 wet season, 5.57±0.53 dry season), but agrees with corrected eddy covariance results (8.65±1.07 wet season, 6.56±0.73 dry season) derived by filtering out lower NEE values obtained during calm periods using independent meteorological criteria. The Rn CO₂ results suggest that uncorrected eddy covariance values underestimate night‐time CO₂ loss at this site. If generalizable to other sites, these observations indicate that previous reports of strong net CO₂ uptake in Amazonian terra firme forest may be overestimated.     

Seasonal variability in net ecosystem carbon dioxide exchange over a young Switchgrass stand

Understanding carbon dynamics of switchgrass ecosystems is crucial as switchgrass (Panicum virgatum L.) acreage is expanding for cellulosic biofuels. We used eddy covariance system and examined seasonal changes in net ecosystem CO₂ exchange (NEE) and its components – gross ecosystem photosynthesis (GEP) and ecosystem respiration (ER) – in response to controlling factors during the second (2011) and third (2012) years of stand establishment in the southern Great Plains of the United States (Chickasha, OK). Larger vapor pressure deficit (VPD > 3 kPa) limited photosynthesis and caused asymmetrical diurnal NEE cycles (substantially higher NEE in the morning hours than in the afternoon at equal light levels). Consequently, rectangular hyperbolic light–response curve (NEE partitioning algorithm) consistently failed to provide good fits at high VPD. Modified rectangular hyperbolic light–VPD response model accounted for the limitation of VPD on photosynthesis and improved the model performance significantly. The maximum monthly average NEE reached up to ?33.02 ± 1.96 μmol CO₂ m^?2 s^?1 and the highest daily integrated NEE was ?35.89 g CO₂ m^?2 during peak growth. Although large differences in cumulative seasonal GEP and ER were observed between two seasons, total seasonal ER accounted for about 75% of GEP regardless of the growing season lengths and differences in aboveground biomass production. It suggests that net ecosystem carbon uptake increases with increasing GEP. The ecosystem was a net sink of CO₂ during 5–6 months and total seasonal uptakes were ?1128 ± 130 and ?1796 ± 217 g CO₂ m^?2 in 2011 and 2012, respectively. In conclusion, our findings suggest that the annual carbon status of a switchgrass ecosystem can be a small sink to small source in this region if carbon loss from biomass harvesting is considered. However, year‐round measurements over several years are required to assess a long‐term source‐sink status of the ecosystem.     

Forest and agricultural land-use-dependent CO2 exchange in Thuringia, Germany

Eddy covariance was used to measure the net CO₂ exchange (NEE) over ecosystems differing in land use (forest and agriculture) in Thuringia, Germany. Measurements were carried out at a managed, even‐aged European beech stand (Fagus sylvatica, 70–150 years old), an unmanaged, uneven‐aged mixed beech stand in a late stage of development (F. sylvatica, Fraxinus excelsior, Acer pseudoplantanus, and other hardwood trees, 0–250 years old), a managed young Norway spruce stand (Picea abies, 50 years old), and an agricultural field growing winter wheat in 2001, and potato in 2002. Large contrasts were found in NEE rates between the land uses of the ecosystems. The managed and unmanaged beech sites had very similar net CO₂ uptake rates (～?480 to ?500 g C m^?2 yr^?1). Main differences in seasonal NEE patterns between the beech sites were because of a later leaf emergence and higher maximum leaf area index at the unmanaged beech site, probably as a result of the species mix at the site. In contrast, the spruce stand had a higher CO₂ uptake in spring but substantially lower net CO₂ uptake in summer than the beech stands. This resulted in a near neutral annual NEE (?4 g C m^?2 yr^?1), mainly attributable to an ecosystem respiration rate almost twice as high as that of the beech stands, despite slightly lower temperatures, because of the higher elevation. Crops in the agricultural field had high CO₂ uptake rates, but growing season length was short compared with the forest ecosystems. Therefore, the agricultural land had low‐to‐moderate annual net CO₂ uptake (?34 to ?193 g C m^?2), but with annual harvest taken into account it will be a source of CO₂ (+97 to +386 g C m^?2). The annually changing patchwork of crops will have strong consequences on the regions' seasonal and annual carbon exchange. Thus, not only land use, but also land‐use history and site‐specific management decisions affect the large‐scale carbon balance.     

Land-use change effects on local energy, water, and carbon balances in an Amazonian agricultural field

To study how changing agricultural practices in the eastern Amazon affect carbon, heat and water exchanges, a 20 m tower was installed in a field in August 2000. Measurements include turbulent fluxes (momentum, heat, water vapor, and CO₂) using the eddy covariance (EC) approach, soil heat flux, wind, and scalar profiles (T, q, and CO₂), soil moisture content, terrestrial, total solar radiation, and photosynthetically active radiation (PAR, 400–700 nm). At the beginning of the measurements, in September 2000, the field was a pasture. On November 2001, the pasture was burned, plowed, and planted in upland (nonirrigated) rice. Calm nights were the norm in this site. Anomalously low values of net ecosystem exchange (NEE) were found using the EC method, even when the common criterion u^*<0.2 m s^?1 was used to identify and exclude poor performance nights. We observed more plausible values of NEE using criterion u^*<0.08 m s^?1, indicating that the criterion must be revised downward for flow over surfaces smoother than forests. However, even using the lower threshold, u^* was lower than this limit for 82% of nights, and this led to nocturnal respiration underestimates. We compensate for this difficulty by estimating the respiration rate using the nocturnal boundary layer budget method. Land‐use change from pasture to rice cultivation strongly affected both diurnal rates of turbulent exchange but also the pattern of seasonal variation. Seasonal wet and dry season differences in vegetation state were clearly detected in the albedo and PAR‐albedo. These reflectivity changes were accompanied by modified net radiative flux, turbulent heat flux and evaporation rates. The highest evaporation rate was observed during the rice crop, when the field had total evaporation approximately half the precipitation input, less than that of the surrounding forest. Effects of the land‐cover changes were also detected in the carbon budget. For the pasture, the maximum CO₂ uptake occurred in May, appreciably delayed from the start of the rainy season. After the field was plowed and the soil was exposed and there was efflux of CO₂ to the atmosphere day and night for an extended period. Highest values of carbon uptake occurred during the rice plantation. Although the upland rice took up carbon at double the rate of the pasture that it replaced, the field was left fallow for much of the year, during the dry season.     

Annual cycles of water vapour and carbon dioxide fluxes in and above a boreal aspen forest

Water vapour and CO₂ fluxes were measured using the eddy correlation method above and below the overstorey of a 21-m tall aspen stand in the boreal forest of central Saskatchewan as part of the Boreal Ecosystem-Atmosphere Study (BOREAS). Measurements were made at the 39.5-m and 4-m heights using 3-dimensional sonic anemometers (Kaijo-Denki and Solent, respectively) and closed-path gas analysers (LI-COR 6262) with 6-m and 4.7-m long heated sampling tubing, respectively. Continuous measurements were made from early October to mid-November 1993 and from early February to late-September 1994. Soil CO₂ flux (respiration) was measured using a LI-COR 6000-09 soil chamber and soil evaporation was measured using Iysimetry. The leaf area index of the aspen and hazelnut understorey reached 1.8 and 3.3, respectively. The maximum daily evapotranspiration (E) rate was 5–6 mm d^?1. Following leaf-out the hazelnut and soil accounted for 22% of the forest E. The estimated total E was 403 mm for 1994. About 88% of the precipitation in 1994 was lost as evapotranspiration. During the growing season, the magnitude of half-hourly eddy fluxes of CO₂ from the atmosphere into the forest reached 1.2 mg CO₂ m^?2 s^?1 (33 μmol C m^?2 s^?1) during the daytime. Downward eddy fluxes at the 4-m height were observed when the hazelnut was growing rapidly in June and July. Under well-ventilated night-time conditions, the eddy fluxes of CO₂ above the aspen and hazelnut, corrected for canopy storage, increased exponentially with soil temperature at the 2-cm depth. Estimates of daytime respiration rates using these relationships agreed well with soil chamber measurements. During the 1994 growing season, the cumulative net ecosystem exchange (NEE) was -3.5 t C ha^?1 y^?1 (a net gain by the system). For 1994, cumulative NEE, ecosystem respiration (R) and gross ecosystem photosynthesis (GEP = R - NEE) were estimated to be -1.3, 8.9 and 10.2 t C ha^?1 y^?1 respectively. Gross photosynthesis of the hazelnut was 32% of GEP.     

Carbon sequestration and ecosystem respiration for 4 years in a Scots pine forest

The net exchange of CO₂ (NEE) between a Scots pine (Pinus sylvestris L.) forest ecosystem in eastern Finland and the atmosphere was measured continuously by the eddy covariance (EC) technique over 4 years (1999–2002). The annual temperature coefficient (Q₁₀) of ecosystem respiration (R) for these years, respectively, was 2.32, 2.66, 2.73 and 2.69. The light‐saturated rate of photosynthesis (A_max) was highest in July or August, with an annual average A_max of 10.9, 14.6, 15.3 and 17.1 μmol m^?2 s^?1 in the 4 years, respectively. There was obvious seasonality in NEE, R and gross primary production (GPP), exhibiting a similar pattern to photosynthetically active radiation (PAR) and air temperature. The integrated daily NEE ranged from 2.59 to ?4.97 g C m^?2 day^?1 in 1999, from 2.70 to ?4.72 in 2000, from 2.61 to ?4.71 in 2001 and from 5.27 to ?4.88 in 2002. The maximum net C uptake occurred in July, with the exception of 2000, when it was in June. The interannual variation in ecosystem C flux was pronounced. The length of the growing season, based on net C uptake, was 179, 170, 175 and 176 days in 1999–2002, respectively, and annual net C sequestration was 152, 101, 172 and 205 g C m^?2 yr^?1. It is estimated that ecosystem respiration contributed 615, 591, 752 and 879 g C m^?2 yr^?1 to the NEE in these years, leading to an annual GPP of ?768, ?692, ?924 and ?1084 g C m^?2 yr^?1. It is concluded that temperature and PAR were the main determinants of the ecosystem CO₂ flux. Interannual variations in net C sequestration are predominantly controlled by average air temperature and integrated radiation in spring and summer. Four years of EC data indicate that boreal Scots pine forest ecosystem in eastern Finland acts as a relatively powerful carbon sink. Carbon sequestration may benefit from warmer climatic conditions.     

Diurnal, seasonal and annual variation in net ecosystem CO2 exchange of an alpine shrubland on Qinghai-Tibetan plateau

Thus far, grassland ecosystem research has mainly been focused on low‐lying grassland areas, whereas research on high‐altitude grassland areas, especially on the carbon budget of remote areas like the Qinghai‐Tibetan plateau is insufficient. To address this issue, flux of CO₂ were measured over an alpine shrubland ecosystem (37°36′N, 101°18′E; 325 above sea level [a. s. l.]) on the Qinghai‐Tibetan Plateau, China, for 2 years (2003 and 2004) with the eddy covariance method. The vegetation is dominated by formation Potentilla fruticosa L. The soil is Mol–Cryic Cambisols. To interpret the biotic and abiotic factors that modulate CO₂ flux over the course of a year we decomposed net ecosystem CO₂ exchange (NEE) into its constituent components, and ecosystem respiration (R_eco). Results showed that seasonal trends of annual total biomass and NEE followed closely the change in leaf area index. Integrated NEE were ?58.5 and ?75.5 g C m^?2, respectively, for the 2003 and 2004 years. Carbon uptake was mainly attributed from June, July, August, and September of the growing season. In July, NEE reached seasonal peaks of similar magnitude (4–5 g C m^?2 day^?1) each of the 2 years. Also, the integrated night‐time NEE reached comparable peak values (1.5–2 g C m^?2 day^?1) in the 2 years of study. Despite the large difference in time between carbon uptake and release (carbon uptake time < release time), the alpine shrubland was carbon sink. This is probably because the ecosystem respiration at our site was confined significantly by low temperature and small biomass and large day/night temperature difference and usually soil moisture was not limiting factor for carbon uptake. In general, R_eco was an exponential function of soil temperature, but with season‐dependent values of Q₁₀. The temperature‐dependent respiration model failed immediately after rain events, when large pulses of R_eco were observed. Thus, for this alpine shrubland in Qinghai‐Tibetan plateau, the timing of rain events had more impact than the total amount of precipitation on ecosystem R_eco and NEE.     

Carbon sequestration potential of tropical pasture compared with afforestation in Panama

Tropical forest ecosystems play an important role in regulating the global climate, yet deforestation and land‐use change mean that the tropical carbon sink is increasingly influenced by agroecosystems and pastures. Despite this, it is not yet fully understood how carbon cycling in the tropics responds to land‐use change, particularly for pasture and afforestation. Thus, the objectives of our study were: (1) to elucidate the environmental controls and the impact of management on gross primary production (GPP), total ecosystem respiration (TER) and net ecosystem CO₂ exchange (NEE); (2) to estimate the carbon sequestration potential of tropical pasture compared with afforestation; and (3) to compare eddy covariance‐derived carbon budgets with biomass and soil inventory data. We performed comparative measurements of NEE in a tropical C₄ pasture and an adjacent afforestation with native tree species in Sardinilla (Panama) from 2007 to 2009. Pronounced seasonal variation in GPP, TER and NEE were closely related to radiation, soil moisture, and C₃ vs. C₄ plant physiology. The shallow rooting depth of grasses compared with trees resulted in a higher sensitivity of the pasture ecosystem to water limitation and seasonal drought. During 2008, substantial amounts of carbon were sequestered by the afforestation (–442 g C m^–2, negative values denote ecosystem carbon uptake), which was in agreement with biometric observations (–450 g C m^–2). In contrast, the pasture ecosystem was a strong carbon source in 2008 and 2009 (261 g C m^–2), associated with seasonal drought and overgrazing. In addition, soil carbon isotope data indicated rapid carbon turnover after conversion from C₄ pasture to C₃ afforestation. Our results clearly show the potential for considerable carbon sequestration of tropical afforestation and highlight the risk of carbon losses from pasture ecosystems in a seasonal tropical climate.     

Modelling night‐time ecosystem respiration by a constrained source optimization method

One of the main challenges to quantifying ecosystem carbon budgets is properly quantifying the magnitude of night‐time ecosystem respiration. Inverse Lagrangian dispersion analysis provides a promising approach to addressing such a problem when measured mean CO₂ concentration profiles and nocturnal velocity statistics are available. An inverse method, termed ‘Constrained Source Optimization’ or CSO, which couples a localized near‐field theory (LNF) of turbulent dispersion to respiratory sources, is developed to estimate seasonal and annual components of ecosystem respiration. A key advantage to the proposed method is that the effects of variable leaf area density on flow statistics are explicitly resolved via higher‐order closure principles. In CSO, the source distribution was computed after optimizing key physiological parameters to recover the measured mean concentration profile in a least‐square fashion. The proposed method was field‐tested using 1 year of 30‐min mean CO₂ concentration and CO₂ flux measurements collected within a 17‐year‐old (in 1999) even‐aged loblolly pine (Pinus taeda L.) stand in central North Carolina. Eddy‐covariance flux measurements conditioned on large friction velocity, leaf‐level porometry and forest‐floor respiration chamber measurements were used to assess the performance of the CSO model. The CSO approach produced reasonable estimates of ecosystem respiration, which permits estimation of ecosystem gross primary production when combined with daytime net ecosystem exchange (NEE) measurements. We employed the CSO approach in modelling annual respiration of above‐ground plant components (c. 214 g C m^?2 year^?1) and forest floor (c. 989 g C m^?2 year^?1) for estimating gross primary production (c. 1800 g C m^?2 year^?1) with a NEE of c. 605 g C m^?2 year^?1 for this pine forest ecosystem. We conclude that the CSO approach can utilise routine CO₂ concentration profile measurements to corroborate forest carbon balance estimates from eddy‐covariance NEE and chamber‐based component flux measurements.     

Carbon sequestration in a high-elevation, subalpine forest

We studied net ecosystem CO₂ exchange (NEE) dynamics in a high‐elevation, subalpine forest in Colorado, USA, over a two‐year period. Annual carbon sequestration for the forest was 6.71 mol C m^?2 (80.5 g C m^?2) for the year between November 1, 1998 and October 31, 1999, and 4.80 mol C m^?2 (57.6 g C m^?2) for the year between November 1, 1999 and October 31, 2000. Despite its evergreen nature, the forest did not exhibit net CO₂ uptake during the winter, even during periods of favourable weather. The largest fraction of annual carbon sequestration occurred in the early growing‐season; during the first 30 days of both years. Reductions in the rate of carbon sequestration after the first 30 days were due to higher ecosystem respiration rates when mid‐summer moisture was adequate (as in the first year of the study) or lower mid‐day photosynthesis rates when mid‐summer moisture was not adequate (as in the second year of the study). The lower annual rate of carbon sequestration during the second year of the study was due to lower rates of CO₂ uptake during both the first 30 days of the growing season and the mid‐summer months. The reduction in CO₂ uptake during the first 30 days of the second year was due to an earlier‐than‐normal spring warm‐up, which caused snow melt during a period when air temperatures were lower and atmospheric vapour pressure deficits were higher, compared to the first 30 days of the first year. The reduction in CO₂ uptake during the mid‐summer of the second year was due to an extended drought, which was accompanied by reduced latent heat exchange and increased sensible heat exchange. Day‐to‐day variation in the daily integrated NEE during the summers of both years was high, and was correlated with frequent convective storm clouds and concomitant variation in the photosynthetic photon flux density (PPFD). Carbon sequestration rates were highest when some cloud cover was present, which tended to diffuse the photosynthetic photon flux, compared to periods with completely clear weather. The results of this study are in contrast to those of other studies that have reported increased annual NEE during years with earlier‐than‐normal spring warming. In the current study, the lower annual NEE during 2000, the year with the earlier spring warm‐up, was due to (1) coupling of the highest seasonal rates of carbon sequestration to the spring climate, rather than the summer climate as in other forest ecosystems that have been studied, and (2) delivery of snow melt water to the soil when the spring climate was cooler and the atmosphere drier than in years with a later spring warm‐up. Furthermore, the strong influence of mid‐summer precipitation on CO₂ uptake rates make it clear that water supplied by the spring snow melt is a seasonally limited resource, and summer rains are critical for sustaining high rates of annual carbon sequestration.     

CO2 exchange in three Canadian High Arctic ecosystems: response to long-term experimental warming

Carbon dioxide exchange, soil C and N, leaf mineral nutrition and leaf carbon isotope discrimination (LCID‐Δ) were measured in three High Arctic tundra ecosystems over 2 years under ambient and long‐term (9 years) warmed (～2°C) conditions. These ecosystems are located at Alexandra Fiord (79°N) on Ellesmere Island, Nunavut, and span a soil water gradient; dry, mesic, and wet tundra. Growing season CO₂ fluxes (i.e., net ecosystem exchange (NEE), gross ecosystem photosynthesis (GEP), and ecosystem respiration (R_e)) were measured using an infrared gas analyzer and winter C losses were estimated by chemical absorption. All three tundra ecosystems lost CO₂ to the atmosphere during the winter, ranging from 7 to 12 g CO₂‐C m^?2 season^?1 being highest in the wet tundra. The period during the growing season when mesic tundra switch from being a CO₂ source to a CO₂ sink was increased by 2 weeks because of warming and increases in GEP. Warming during the summer stimulated dry tundra GEP more than R_e and thus, NEE was consistently greater under warmed as opposed to ambient temperatures. In mesic tundra, warming stimulated GEP with no effect on R_e increasing NEE by ～10%, especially in the first half of the summer. During the ～70 days growing season (mid‐June–mid‐August), the dry and wet tundra ecosystems were net CO₂‐C sinks (30 and 67 g C m^?2 season^?1, respectively) and the mesic ecosystem was a net C source (58 g C m^?2 season^?1) to the atmosphere under ambient temperature conditions, due in part to unusual glacier melt water flooding that occurred in the mesic tundra. Experimental warming during the growing season increased net C uptake by ～12% in dry tundra, but reduced net C uptake by ～20% in wet tundra primarily because of greater rates of R_e as opposed to lower rates of GEP. Mesic tundra responded to long‐term warming with ～30% increase in GEP with almost no change in R_e reducing this tundra type to a slight C source (17 g C m^?2 season^?1). Warming caused LCID of Dryas integrafolia plants to be higher in dry tundra and lower in Salix arctic plants in mesic and wet tundra. Our findings indicate that: (1) High Arctic ecosystems, which occur in similar mesoclimates, have different net CO₂ exchange rates with the atmosphere; (2) long‐term warming can increase the net CO₂ exchange of High Arctic tundra by stimulating GEP, but it can also reduce net CO₂ exchange in some tundra types during the summer by stimulating R_e to a greater degree than stimulating GEP; (3) after 9 years of experimental warming, increases in soil carbon and nitrogen are detectable, in part, because of increases in deciduous shrub cover, biomass, and leaf litter inputs; (4) dry tundra increases in GEP, in response to long‐term warming, is reflected in D. integrifolia LCID; and (5) the differential carbon exchange responses of dry, mesic, and wet tundra to similar warming magnitudes appear to depend, in part, on the hydrologic (soil water) conditions. Annual net ecosystem CO₂‐C exchange rates ranged from losses of 64 g C m^?2 yr^?1 to gains of 55 g C m^?2 yr^?1. These magnitudes of positive NEE are close to the estimates of NPP for these tundra types in Alexandra Fiord and in other High Arctic locations based on destructive harvests.     

Ecosystem CO2 exchange and plant biomass in the littoral zone of a boreal eutrophic lake

• 1 In order to study the dynamics of primary production and decomposition in the lake littoral, an interface zone between the pelagial, the catchment and the atmosphere, we measured ecosystem/atmosphere carbon dioxide (CO₂) exchange in the littoral zone of an eutrophic boreal lake in Finland during two open water periods (1998–1999). We reconstructed the seasonal net CO₂ exchange and identified the key factors controlling CO₂ dynamics. The seasonal net ecosystem exchange (NEE) was related to the amount of carbon accumulated in plant biomass.
• 2 In the continuously inundated zones, spatial and temporal variation in the density of aerial shoots controlled CO₂ fluxes, but seasonal net exchange was in most cases close to zero. The lower flooded zone had a net CO₂ uptake of 1.8–6.2 mol m^?2 per open water period, but the upper flooded zone with the highest photosynthetic capacity and above‐ground plant biomass, had a net CO₂ loss of 1.1–7.1 mol m^?2 per open water period as a result of the high respiration rate. The excess of respiration can be explained by decomposition of organic matter produced on site in previous years or leached from the catchment.
• 3 Our results from the two study years suggest that changes in phenology and water level were the prime cause of the large interannual difference in NEE in the littoral zone. Thus, the littoral is a dynamic buffer and source for the load of allochthonous and autochthonous carbon to small lakes.

     

Contribution of volatile organic compound fluxes to the ecosystem carbon budget of a poplar short‐rotation plantation

Biogenic volatile organic compounds (BVOCs) are major precursors of both ozone and secondary organic aerosols (SOA) in the troposphere and represent a non‐negligible portion of the carbon fixed by primary producers, but long‐term ecosystem‐scale measurements of their exchanges with the atmosphere are lacking. In this study, the fluxes of 46 ions corresponding to 36 BVOCs were continuously monitored along with the exchanges of mass (carbon dioxide and water vapor) and energy (sensible and latent heat) for an entire year in a poplar (Populus) short‐rotation crop (SRC), using the eddy covariance methodology. BVOC emissions mainly consisted of isoprene, acetic acid, and methanol. Total net BVOC emissions were 19.20 kg C ha^?1 yr^?1, which represented 0.63% of the net ecosystem exchange (NEE), resulting from ?23.59 Mg C ha^?1 yr^?1 fixed as CO₂ and 20.55 Mg C ha^?1 yr^?1 respired as CO₂ from the ecosystem. Isoprene emissions represented 0.293% of NEE, being emitted at a ratio of 1 : 1709 mol isoprene per mol of CO₂ fixed. Based on annual ecosystem‐scale measurements, this study quantified for the first time that BVOC carbon emissions were lower than previously estimated in other studies (0.5–2% of NEE) on poplar trees. Furthermore, the seasonal and diurnal emission patterns of isoprene, methanol, and other BVOCs provided a better interpretation of the relationships with ecosystem CO₂ and water vapor fluxes, with air temperature, vapor pressure deficit, and photosynthetic photon flux density.     

High rates of net ecosystem carbon assimilation by Brachiara pasture in the Brazilian Cerrado

To investigate the consequences of land use on carbon and energy exchanges between the ecosystem and atmosphere, we measured CO₂ and water vapour fluxes over an introduced Brachiara brizantha pasture located in the Cerrado region of Central Brazil. Measurements using eddy covariance technique were carried out in field campaigns during the wet and dry seasons. Midday CO₂ net ecosystem exchange rates during the wet season were ?40 μmol m^?2 s^?1, which is more than twice the rate found in the dry season (?15 μmol m^?2 s^?1). This was observed despite similar magnitudes of irradiance, air and soil temperatures. During the wet season, inferred rates of canopy photosynthesis did not show any tendency to saturate at high solar radiation levels, with rates of around 50 μmol m^?2 s^?1 being observed at the maximum incoming photon flux densities of 2200 μmol m^?2 s^?1. This contrasted strongly to the dry period when light saturation occurred with 1500 μmol m^?2 s^?1 and with maximum canopy photosynthetic rates of only 20 μmol m^?2 s^?1. Both canopy photosynthetic rates and night‐time ecosystem CO₂ efflux rates were much greater than has been observed for cerrado native vegetation in both the wet and dry seasons. Indeed, observed CO₂ exchange rates were also much greater than has previously been reported for C₄ pastures in the tropics. The high rates in the wet season may have been attributable, at least in part, to the pasture not being grazed. Higher than expected net rates of carbon acquisition during the dry season may also have been attributable to some early rain events. Nevertheless, the present study demonstrates that well‐managed, productive tropical pastures can attain ecosystem gas exchange rates equivalent to fertilized C₄ crops growing in the temperate zone.     

Net ecosystem CO2 exchange in Mojave Desert shrublands during the eighth year of exposure to elevated CO2

Arid ecosystems, which occupy about 35% of the Earth's terrestrial surface area, are believed to be among the most responsive to elevated [CO₂]. Net ecosystem CO₂ exchange (NEE) was measured in the eighth year of CO₂ enrichment at the Nevada Desert Free‐Air CO₂ Enrichment (FACE) Facility between the months of December 2003–December 2004. On most dates mean daily NEE (24 h) (μmol CO₂ m^?2 s^?1) of ecosystems exposed to elevated atmospheric CO₂ were similar to those maintained at current ambient CO₂ levels. However, on sampling dates following rains, mean daily NEEs of ecosystems exposed to elevated [CO₂] averaged 23 to 56% lower than mean daily NEEs of ecosystems maintained at ambient [CO₂]. Mean daily NEE varied seasonally across both CO₂ treatments, increasing from about 0.1 μmol CO₂ m^?2 s^?1 in December to a maximum of 0.5–0.6 μmol CO₂ m^?2 s^?1 in early spring. Maximum NEE in ecosystems exposed to elevated CO₂ occurred 1 month earlier than it did in ecosystems exposed to ambient CO₂, with declines in both treatments to lowest seasonal levels by early October (0.09±0.03 μmol CO₂ m^?2 s^?1), but then increasing to near peak levels in late October (0.36±0.08 μmol CO₂ m^?2 s^?1), November (0.28±0.03 μmol CO₂ m^?2 s^?1), and December (0.54±0.06 μmol CO₂ m^?2 s^?1). Seasonal patterns of mean daily NEE primarily resulted from larger seasonal fluctuations in rates of daytime net ecosystem CO₂ uptake which were closely tied to plant community phenology and precipitation. Photosynthesis in the autotrophic crust community (lichens, mosses, and free‐living cyanobacteria) following rains were probably responsible for the high NEEs observed in January, February, and late October 2004 when vascular plant photosynthesis was low. Both CO₂ treatments were net CO₂ sinks in 2004, but exposure to elevated CO₂ reduced CO₂ sink strength by 30% (positive net ecosystem productivity=127±17 g C m^?2 yr^?1 ambient CO₂ and 90±11 g C m^?2 yr^?1 elevated CO₂, P=0.011). This level of net C uptake rivals or exceeds levels observed in some forested and grassland ecosystems. Thus, the decrease in C sequestration seen in our study under elevated CO₂– along with the extensive coverage of arid and semi‐arid ecosystems globally – points to a significant drop in global C sequestration potential in the next several decades because of responses of heretofore overlooked dryland ecosystems.     

Year-round observations of the net ecosystem exchange of carbon dioxide in a native tallgrass prairie

An Ameriflux site was established in mid 1996 to study the exchange of CO₂ in a native tallgrass prairie of north‐central Oklahoma, USA. Approximately the first 20 months of measurements (using eddy covariance) are described here. This prairie, dominated by warm season C4 grasses, is typical of the central Kansas/northern Oklahoma region. During the first three weeks of the measurement period (mid‐July–early August 1996), moisture‐stress conditions prevailed. For the remainder of the period (until March 1998), however, soil moisture was nonlimiting. Mid‐day net ecosystem CO₂ exchange (NEE), under well‐watered conditions, reached a maximum magnitude of 1.4 mg CO₂ m^?2 s^?1 (flux toward the surface is positive) during peak growth (mid‐July 1997), with green leaf area index of 2.8. In contrast, under moisture‐stress conditions in the same growth stage in 1996, mid‐day NEE was reduced to near‐zero. Average night NEE ranged from near‐zero, during winter dormancy, to ? 0.50 mg CO₂ m^?2 s^?1, during peak growth. Most of the variance in average night NEE was explained by changes in soil temperature (0.1 m depth) and green leaf area. The daytime NEE measurements were examined in terms of a rectangular hyperbolic relationship with incident photosynthetically active radiation. The analysis showed that the quantum yield during peak growth was similar to those measured in other prairies and the y‐intercept, so obtained, can be potentially used as an estimate of night‐time CO₂ emissions when eddy covariance data are unavailable. Daily integrated NEE reached its peak magnitude of 30.8 g CO₂ m^?2 d^?1 (8.4 g C m^?2 d^?1) in mid‐July when the green LAI was the largest (about 2.8). In general, the seasonal trend of daily NEE (on relatively clear days) followed that of green LAI. Annually integrated carbon exchange, between prescribed burns in 1997 and 1998, was 268 g C m^?2 y^?1. After incorporating carbon loss during the prescribed burn , the net annual carbon exchange in this prairie was near‐zero in 1998.     

Seasonal variation in energy fluxes and carbon dioxide exchange for a broad-leaved semi-arid savanna (Mopane woodland) in Southern Africa

We studied the seasonal variation in carbon dioxide, water vapour and energy fluxes in a broad‐leafed semi‐arid savanna in Southern Africa using the eddy covariance technique. The open woodland studied consisted of an overstorey dominated by Colophospermum mopane with a sparse understorey of grasses and herbs. Measurements presented here cover a 19‐month period from the end of the rainy season in March 1999 to the end of the dry season September 2000. During the wet season, sensible and latent heat fluxes showed a linear dependence on incoming solar radiation (I) with a Bowen ratio (β) typically just below unity. Although β was typically around 1 at low incoming solar radiation (150 W m^?2) during the dry season, it increased dramatically with I, typically being as high as 4 or 5 around solar noon. Thus, under these water‐limited conditions, almost all available energy was dissipated as sensible, rather than latent heat. Marked spikes of CO₂ release occurred at the onset of the rainfall season after isolated rainfall events and respiration dominated the balance well into the rainfall season. During this time, the ecosystem was a constant source of CO₂ with an average flux of 3–5 μmol m^?2 s^?1 to the atmosphere during both day and night. But later in the wet season, for example, in March 2000 under optimal soil moisture conditions, with maximum leaf canopy development (leaf area index 0.9–1.3), the peak ecosystem CO₂ influx was as much as 10 μmol m^?2 s^?1. The net ecosystem maximum photosynthesis at this time was estimated at 14 μmol m^?2 s^?1, with the woodland ecosystem a significant sink for CO₂. During the dry season, just before leaf fall in August, maximum day‐ and night‐time net ecosystem fluxes were typically ?3 μmol m^?2 s^?1 and 1–2 μmol m^?2 s^?1, respectively, with the ecosystem still being a marginal sink. Over the course of 12 months (March 1999–March 2000), the woodland was more or less carbon neutral, with a net uptake estimated at only about 1 mol C m^?2 yr^?1. The annual net photosynthesis (gross primary production) was estimated at 32.2 mol m^?2 yr^?1.     

Environmental controls on net ecosystem-level carbon exchange and productivity in a Central American tropical wet forest

Difficulty in balancing the global carbon budget has lead to increased attention on tropical forests, which have been estimated to account for up to one third of global gross primary production. Whether tropical forests are sources, sinks, or neutral with respect to their carbon balance with the atmosphere remains unclear. To address this issue, estimates of net ecosystem exchange of carbon (NEE) were made for 3 years (1998–2000) using the eddy‐covariance technique in a tropical wet forest in Costa Rica. Measurements were made from a 42 m tower centred in an old‐growth forest. Under unstable conditions, the measurement height was at least twice the estimated zeroplane height from the ground. The canopy at the site is extremely rough; under unstable conditions the median aerodynamic roughness length ranged from 2.4 to 3.6 m. No relationship between NEE and friction velocity (u*) was found using all of the 30‐min averages. However, there was a linear relationship between the nighttime NEE and averaged u* (R² = 0.98). The diurnal pattern of flux was similar to that found in other tropical forests, with mean daytime NEE ca. ? 18 μ mol CO₂ m^?2 s^?1 and mean nighttime NEE 4.6 μ mol CO₂ m^?2 s^?1. However, because ～ 80% of the nighttime data in this forest were collected during low u* conditions ( < 0.2 m s^?1), nighttime NEE was likely underestimated. Using an alternative analysis, mean nighttime NEE increased to 7.05 μ mol CO₂ m^?2 s^?1. There were interannual differences in NEE, but seasonal differences were not apparent. Irradiance accounted for ～ 51% of the variation in the daytime fluxes, with temperature and vapour pressure deficit together accounting for another ～ 20%. Light compensation points ranged from 100 to 207 μ mol PPFD m^?2 s^?1. No was relationship was found between 30‐min nighttime NEE and tower‐top air temperature. A weak relationship was found between hourly nighttime NEE and canopy air temperature using data averaged hourly over the entire sampling period (Q₁₀ = 1.79, R² = 0.17). The contribution of below‐sensor storage was fairly constant from day to day. Our data indicate that this forest was a slight carbon source in 1998 (0.05 to ?1.33 t C ha^?1 yr^?1), a moderate sink in 1999 (?1.53 to ?3.14 t C ha^?1 yr^?1), and a strong sink in 2000 (?5.97 to ?7.92 t C ha^?1 yr^?1). This trend is interpreted as relating to the dissipation of warm‐phase El Niño effects over the course of this study.     

Seasonal Net Ecosystem Carbon Exchange of a Regenerating Cutaway Bog: How Long Does it Take to Restore the C‐Sequestration Function?

We measured the net ecosystem exchange (NEE) and respiration rates and modeled the photosynthesis and respiration dynamics in a cutover bog in the Swiss Jura Mountains during one growing season at three stages of regeneration (29, 42, and 51 years after peat cutting; coded sites A, B, and C) to determine if reestablishment of Sphagnum suffices to restore the C‐sequestration function. From the younger to the older stage Sphagnum cover increased, while net primary Sphagnum production over the growing season decreased (139, 82, and, 67 g m^?2 y^?1 for A, B, and C respectively), and fen plant species were replaced by bog species. According to our NEE estimations, over the vegetation period site A was a net CO₂‐C source emitting 40 g CO₂‐C/m² while sites B and C were accumulating CO₂‐C, on average 222 and 209 g CO₂‐C/m², respectively. These differences are due to the higher respiration in site A during the summer, suggesting that early regeneration stages may be more sensitive to a warmer climate. Methane fluxes increased from site A to C in parallel with Eriophorum vaginatum cover and vascular plant leaf area. Our results show that reestablishing a Sphagnum cover is not sufficient to restore a CO₂‐sequestrating function but that after circa 50 years the ecosystem may naturally regain this function over the growing season.