Inhibition of environmental estrogen-induced proliferation of human breast carcinoma MCF-7 cells by flavonoids

Summary In the present study, we evaluated the individual and combined effects of environmental estrogens and flavonoids on the proliferation of human breast carcinoma MCF-7 cells. These compounds are as follows: (1) pharmaceutical chemicals such as diethylstilbestrol, 17α-ethynylestradiol (17ES), tamoxifen, mestranol, and clomiphene, (2) industrial chemicals such as bisphenol A (BisA), 4-octylphenol (OP), 4-nonylphenol (NP), andp,p′-biphenol, and (3) flavonoids such as daidzein (D), genistein (G), quercetin (Q), and luteolin (L). We found that nanomolar concentrations of 17ES, BisA, OP, and NP were sufficient to stimulate the proliferation of MCF-7 cells. Among then, 1 μM BisA exhibited cell proliferation-stimulating activity as strong as 10 nM 17β-estradiol; and D and G exhibited cell proliferation-stimulating activity at 10 nM. On the other hand, Q and L exhibited cell proliferation-inhibiting activity. We also found that 10 nM flavonoids, such as D, G, Q, and L, were able to inhibit the proliferation-stimulating activity in MCF-7 cells by 1 μM environmental estrogens.     

Coenzyme Q system in the classification of some ascosporogenous yeast genera in the families Saccharomycetaceae and Spermophthoraceae

The Co-Q systems of 11 strains representing the generaSchwanniomyces, Lodderomyces, Lipomyces, Nematospora andMetschnikowia were determined. All the genera were characterized by the Q-9 system except for the genusNematospora with needle-shaped ascospores. The only species,Nem. coryli, was found to have the Q-6 system. These results are discussed from the taxonomic point of view. This constitutes Part VII of a series entitled “Significance of the coenzyme Q system in the classification of yeasts and yeast-like organisms.” The abbreviations used here for coenzyme Q or ubiquinone are: Co-Q, coenzyme Q; Co-Q _n , Q-n or Q _n withn denoting a specified number of isoprene units in a side chain, e.g., Co-Q₆, Q-6, Q₆, etc.     

Phylogeny, evolution and biogeography of the Quadrifoliovariinae Yamaguti, 1965 (Digenea: Lecithasteridae)

The Quadrifoliovariinae is revised and three new species of Quadrifoliovarium Yamaguit, 1965 from acanthurid fishes of the genus Naso from waters of the Indo-Pacific are described: Q, maceria n. sp. from N.␣tonganus, N. annulatus, N. fageni and N. brevirostris; Q. simplex n. sp. from N. tonganus and N.␣annulatus; and Q. quattuordecim n. sp. from N. tonganus. Amendments are made to the characterisation of the Quadrifoliovariinae, Quadrifoliovarium, Bilacinia Manter, 1969 and Unilacinia Manter, 1969 in light of observations on type and new material. A molecular phylogeny based on ITS2 and 28S regions of the ribosomal DNA is proposed. The phylogeny suggests that U. asymmetrica is the most basal taxon and Q.␣simplex n. sp. and Q. quattuordecim n. sp. the most derived. Evolution of morphological traits within the Quadrifoliovariinae are discussed in light of the molecular phylogeny. Molecular sequences of the ITS2 rDNA were identical between specimens of Q. pritchardae collected off Exmouth (Indian Ocean), Heron Island and Lizard Island (Western Pacific) and Moorea (far Eastern Indo-Pacific), indicating a broad Indo-Pacific distribution. All members of the subfamily are recorded only from the acanthurid genus Naso, with the exception of B. lobatum (Yamaguti, 1970), which has been recorded from a pomacanthid. The restricted host range of the group is discussed in the light of the phylogeny of the host genus Naso.     

Molecular dynamics simulations of the folding of poly(alanine) peptides

The secondary structures and the shapes of long-chain polyalanine (PA) molecules were investigated by all-atom molecular dynamics simulations using a modified Amber force field. Homopolymers of polyaminoacids such as PA are convenient models to study the mechanism of protein folding. It was found that the conformational structures of PA peptides are highly sensitive to the chain length. In the absence of solvent, straight α-helices dominate in short (n ∼ 20) peptides at room temperature. A shape transition occurs at a chain length n of 40–45; the compact helix-turn-helix structure (the double-leg hairpin) becomes favored over a straight α-helix. For n = 60, double-leg and the triple-leg hairpins are the only structures present in PA molecules. An exploration of a chain organization in a cubic cavity revealed a clear predisposition of PA molecules for additional breaks in α-helices and the formation of multifolded hairpins. Furthermore, under confinement the hairpin structure becomes much looser, the antiparallel positions of helical stems are disturbed, and a sizeable proportion of the helical stems are transformed from α-helices into 3₁₀-helices.     

Identification of <Emphasis Type="Italic">Porphyra yezoensis</Emphasis> (Rhodophyta) meiosis by DNA quantification using confocal laser scanning microscopy

Conchospore germlings of Porphyra yezoensis were stained with a fluorescent dye for DNA and observed with confocal laser scanning microscopy (CLSM). Relative DNA values of the germling nuclei were obtained by measuring fluorescence intensities of nuclear regions of the optically sliced specimens, using the mean value of the smallest blade cells as a reference of the genomic n value. Such quantification revealed that the nuclear DNA amounts of the one-cell, two-cell, and four-cell-stage germlings are approximately 4 × n, 2 × n, and n ∼2 × n values respectively; these values agreed well with the expected ones from the hypothesis that meiosis corresponds to the first successive cell divisions after the conchospore germination. These results are consistent with a previous study on cytogenetic analysis of the chimaera blade formation (Ohme and Miura 1988, Plant Sci 57:135–140) and not consistent with a recent microscopic study (Wang et al. 2006, Phycol Res 54:201–207) which proposed that the first meiotic division occurs at the conchospore formation and the second division at the germination.     

The Mutation Process in Colored Coalescent Theory

The mutation process is introduced into the colored coalescent theory. The mutation process can be viewed as an independent Poisson process running on the colored genealogical random tree generated by the colored coalescent process, with the edge lengths of the random tree serving as the time scale for the mutation process. Moving backward along the colored genealogical tree, the color of vertices may change in two ways, when two vertices coalesce, or when a mutation happens. The rule that governs the coalescent change of color involves a parameter x; the rule that governs the mutation involves a parameter μ. Explicit computations of the expectation of the coalescent time (the first hitting time), and the coalescent probabilities (the first hitting probabilities) are carried out. For example, our calculation shows that when x=1/2, for a sample of n colored individuals, the expected time for the colored coalescent process with the mutation process superimposed to first reach a black MRCA or a white MRCA, respectively, is 3−2/n with probability 1/2 for any value of the parameter μ. On the other hand, the expected time for the colored coalescent process with mutation to first reach a MRCA, either black or white, is 2−2/n for any values of the parameters μ and x, which is the same as that for the standard Kingman coalescent process.     

Increased Lipid Peroxidation and Ascorbic Acid Utilization in Testis and Epididymis of Rats Chronically Exposed to Lead

The hypothesis has been recently presented that lead may exert its negative effect at least partially through the increase of reactive oxygen species (ROS) level in tissues. However, little is known about the influence of lead intoxication on equilibrium between generation and elimination of ROS in the male reproductive system. Sexually mature male Wistar rats were given ad libitum 1% of aqueous solution of lead acetate (PbAc) for 9 months. Significantly higher lead concentrations were found in blood [median 7.03 (Q25–Q75: 2.99–7.65) versus 0.18 (0.12–0.99) μg dl⁻¹, P < 0.01], caput epididymis [median 5.51 (Q25–Q75: 4.31–7.83) versus 0.51 (0.11–0.80) μg g⁻¹ d.m., P < 0.001], cauda epididymis [median 5.88 (Q25–Q75: 4.06–8.37) versus 0.61 (0.2 – 1.08) μg g⁻¹ d.m., P < 0.001] and testis [median 1.81 (Q25–Q75: 0.94–2.31) versus 0.17 (0.03–0.3) μg g⁻¹ d.m., P < 0.01] of lead-intoxicated rats when compared to the control. The concentration of ascorbyl radical, generated in vitro from l-ascorbic acid (present in tissues in vivo) was measured by means of Electron Paramagnetic Resonance (EPR) spectroscopy. The EPR signal of ascorbyl radical in caput epididymis, cauda epididymis, testis and liver of lead acetate-treated animals revealed a significant decrease by 53%, 45%, 40% and 69% versus control tissues, respectively. Plasma l-ascorbic acid content measured by high performance liquid chromatography (HPLC) method and total antioxidant status (TAS) measured by means of spectrophotometry were also significantly lower in the intoxicated versus control animals (28% and 21%, respectively). In the group exposed to lead the concentration of lipid peroxide in homogenates of the reproductive system organs was significantly elevated versus control group. It can be assumed that the lower EPR signal was caused by decreased tissue concentrations of l-ascorbic acid. The latter may have resulted from consumption of ascorbic acid for scavenging of ROS excess in tissues of animals chronically exposed to lead.     

Bounds on the total particle number for species governed by reaction-diffusion equations in the infinite spatial domain

Differential inequality methods are developed for establishing upper and lower bounds on the total particle numberN(t)=∫θ(x,t) d³ x associated with solutions to nonlinear reaction-diffusion equations of the form ∂θ/∂t=D∇²θ+fθ-gθ ⁿ⁺¹ , whereD(>0),n(>0),f andg are constant parameters. If finite in a neighborhood oft=0,N(t) is bounded below for allt≥0 by a certain derived function oft for equations withg≥0. An upper bound onN(t) is obtained for equations withn=1,f<0 andg<0. These results provide general preservation and extinction criteria for the total particle number.     

A systematic search for the structures,stabilities, and electronic properties of bimetallic Ca<Subscript>2</Subscript>-doped gold clusters: comparison with pure gold clusters

The local meta-GGA exchange correlation density functional (TPSS) with a relativistic effective core potential was employed to systematically investigate the geometric structures, stabilities, and electronic properties of bimetallic Ca₂Au _n (n = 1–9) and pure gold Au _n (n ≤ 11) clusters. The optimized geometries show that the most stable isomers for Ca₂Au _n clusters have 3D structure when n > 2, and that one Au atom capping the Ca₂Au _n−1 structure for different-sized Ca₂Au _n (n = 1–9) clusters is the dominant growth pattern. The average atomic binding energies and second-order difference in energies show that the Ca₂Au₄ isomer is the most stable among the Ca₂Au _n clusters. The same pronounced even–odd alternations are found in the HOMO–LUMO gaps, VIPs, and hardnesses. The polarizabilities of the Ca₂Au _n clusters show an obvious local minimum at n = 4. Moreover, the inverse corrections to the polarizabilities versus the ionization potential and hardness were found for the gold clusters.     

Central hemodynamic and heart rate variability parameters in athletes during different training programs

Central hemodynamic and heart rate variability (HRV) parameters were assessed in highly qualified athletes differing in the types of their training programs at relative rest. During endurance (the endurance group, n = 27) and strength (the strength group, n = 17) trainings, the total peripheral resistance (TPR) was decreased by 15% (p = 0.003) in the endurance group and by 16% (p = 0.011) in the strength group, and the stroke volume increased by 31% (p < 0.0001) in the endurance group and by 19% (p = 0.024) in the strength group. In the strength group, the cardiac output (Q) was higher (p = 0.012) and the temporal and spectral parameters of HRV (RMSSD, pNN ₅₀, and HF) were lower (p < 0.05) than those in the control group (n = 56). Some of these differences can be explained by an increased body mass index (p = 0.005) in the strength group. In the endurance group, the HRV parameters (RMSSD, pNN₅₀, HF, VLF, and TP) were higher (p ≤ 0.02), and the mean blood pressure was lower (p < 0.003) than those in the control group, with no significant differences in the Q from the control group. Our findings suggest that, in the strength-training athletes, resting hemodynamics were characterized by a greater Q level and a greater tension of mechanisms regulating cardiac activity. In the endurance-training athletes, a low Q level was associated with a lower tension of the mechanisms regulating cardiac activity (an increased vagal tone).     

Copper Concentration in Body Tissues and Fluids in Normal Subjects of Southern Poland

Data on the concentration of the elements in the human body are important, for example, to estimate the amounts required to maintain a good healthy state or find their connections with morbidity and mortality. In this paper, the concentration of copper (by flame atomic absorption spectrometry) in material obtained from autopsy cases of nonpoisoned people (n = 130), aged from 14 to 80 years, between 1990–2006, is presented. The following values were found (mean ± SD in micrograms of copper per gram or per milliliter): brain 3.32 ± 1.50 (n = 43), liver 3.47 ± 1.51 (n = 79), kidney 2.15 ± 0.90 (n = 76), stomach 1.10 ± 0.76 (n = 65), intestines 1.54 ± 1.19 (n = 25), lung 1.91 ± 1.30 (n = 27), spleen 1.23 ± 0.28 (n = 3), heart 3.26 ± 0.59 (n = 5), bile 3.60 ± 1.67 (n = 13), and blood 0.85 ± 0.19 (n = 73).     

Heat and mass exchange processes between the surface of the human body and ambient air at various altitudes

 The rates of convection and evaporation at the interface between the human body and the surrounding air are expressed by the parameters convective heat transfer coefficient h _c, in W m^–2°C^–1 and evaporative heat transfer coefficient h _e, W m^–2 hPa^–1. These parameters are determined by heat transfer equations, which also depend on the velocity of the airstream around the body, that is still air (free convection) and moving air (forced convection). The altitude dependence of the parameters is represented as an exponential function of the atmospheric pressure p: h _c∼p ⁿ and h _e∼p ^1–n, where n is the exponent in the heat transfer equation. The numerical values of n are related to airspeed: n=0.5 for free convection, n=0.618 when airspeed is below 2.0 ms^–1 and n=0.805 when airspeed is above 2.0 ms^–1. This study considers the coefficients h _c and h _e with respect to the similarity of the two processes, convection and evaporation. A framework to explain the basis of established relationships is proposed. It is shown that the thickness of the boundary layer over the body surface increases with altitude. As a medium of the transfer processes, the boundary layer is assumed to be a layer of still air with fixed insulation which causes a reduction in the intensity of heat and mass flux propagating from the human body surface to its surroundings. The degree of reduction is more significant at a higher altitude because of the greater thickness of the boundary layer there. The rate of convective and evaporative heat losses from the human body surface at various altitudes in otherwise identical conditions depends on the following factors: (1) during convection – the thickness of the boundary layer, plus the decrease in air density, (2) during evaporation (mass transfer) – the thickness of the boundary layer, plus the increase with altitude in the diffusion coefficient of water vapour in the air. The warming rate of the air volume due to convection and evaporation is also considered. Expressions for the calculation of altitude dependences h _c (p) and h _e (p) are suggested. Received: 23 June 1998 / Accepted: 10 February 1999     

Theoretical study on the structural,vibrational, and thermodynamic properties of the (Br<Subscript>2</Subscript>GaN<Subscript>3</Subscript>)<Subscript><Emphasis Type="Italic">n</Emphasis></Subscript> (<Emphasis Type="Italic">n</Emphasis> = 1–4) clusters

The molecular geometries, vibrational properties, and thermodynamic properties of the clusters (Br₂GaN₃) _n (n = 1–4) were studied at the B3LYP/6-311+G* level. The optimized clusters (Br₂GaN₃) _n (n = 2–4) were all found to possess a cyclic structure consisting of Ga atoms bridged by the α-nitrogen of the azide groups. A discussion of the relationships between the geometrical parameters and the degree of oligomerization n is provided. Features in the IR spectra were assigned by vibrational analysis. Trends in thermodynamic properties with temperature and degree of oligomerization n are discussed. Thermodynamic analysis of the gas-phase reaction showed that the formation of the clusters (Br₂GaN₃) _n (n = 2–4) is thermodynamically favorable considering the enthalpies at 298.2 K. The calculated results for the Gibbs free energies were negative, which indicates that the oligomerizations can occur spontaneously at 298.2 K.     

Ectomycorrhizal fungal communities of pedunculate and sessile oak seedlings from bare-root forest nurseries

In this study, we present the detailed molecular investigation of the ectomycorrhizal (ECM) community of Quercus petraea and Quercus robur seedlings grown in bare-root forest nurseries. In all tested oak samples, mycorrhizal colonization was nearly 100%. Morphological observation and molecular investigations (sequencing of fungal ITS rDNA) revealed a total of 23 mycorrhizal taxa. The most frequent and abundant fungal taxa were Hebeloma sacchariolens, Tuber sp., and Peziza sp.; from the detected fungal taxa, 20 were noted for Q. petraea and 23 for Q. robur. Depending on the nursery, the species richness of identified ECM fungal taxa for both oak species ranged from six to 11 taxa. The mean species richness for all nurseries was 5.36 and 5.82 taxa per Q. petraea and Q. robur sample, respectively. According to the analysis of similarity, ECM fungal communities were similar for Q. petraea and Q. robur (R = 0.019; p = 0.151). On the other hand, detected fungal communities were significantly different between nurseries (R = 0.927; p < 0.0001). Using the Spearman rank correlation, it was determined that the ectomycorrhizal diversity (in terms of richness, the Shannon diversity, evenness, and Simpson dominance indices) is significantly related to the soil parameters of each nursery. We conclude that individual nursery may be considered as separate ecological niches that strongly discriminate diversity of ECM fungi.     

Kinetic analysis of the template effect in ribooligoguanylate elongation

We have undertaken a complete kinetic analysis of the template-directed oligoguanylate synthesis originated in Orgel's laboratory (Inoue and Orgel, 1982). The reaction of guanosine 5′-phospho-2-methylimidazolide, 2-MelmpG, with ribooligoguanylates all 3′–5′ linked, designatedn ³ withn=7−12, was studied in the presence/absence of the complementary template polycytidylic acid, poly(C). Conditions were chosen where poly(C) and 2-MelmpG are in large excess over the oligoguanylate. In the absence of the template at 37 °C the reaction leads to three isomeric oligomers that are elongated by one monomer unit. They are the 3′–5′ linked, (n+1)³, the 2′–5′ linked, (n+1)², and the pyrophosphate product, (n+1) ^p , formed in an approximate ratio 1:2:5. In the presence of the template the reaction is 20-fold faster and yields productsn+1,n+2,n+3 etc. as long as 2-MelmpG is available. Most importantly the formation of the natural, 3′–5′ linked isomer, is enhanced selectively by 140-fold at 37 °C. Qualitative observations allow the conclusion that this enhancement is temperature dependent and increases with decreasing temperature. For example, at 1 °C only the 3′–5′ linked isomers were detected. Initial rates for the disappearance of then ³ oligoguanylate were determined at 1, 23, and 37 °C. It was found that the pseudo-first order rate constant for oligoguanylate elongation was linearly proportional to the 2-MelmpG concentration. This implies that the reaction complex poly(C)·n ³·2-MelmpG does not accumulate under the reaction conditions, a conclusion which is also supported by infrared data (Miles and Frazier, 1982). The implication of the above results with respect to chemical evolution is that lower temperatures, i.e., close to freezing, enhance the regioselectivity of these template-directed reactions and that one way to improve replication models may be sought in finding conditions that favor stable reaction complexes. NASA — National Research Council Research Fellow.     

A method for numbering binary rooted and unrooted phylogenies and their hypothetical taxonomic units

A set of 2n−2 relations (edges) and a set ofn−1 hypothetical taxonomic units (HTUs) derive from the estimation of a binary phylogeny of a set ofn operational taxonomic units (OTUs). We propose an easy way for numbering thesen−1 hypothetical taxonomic units, as well as for then−2 interior points of an unrooted binary phylogeny. We also present an alternative method to the one proposed by Rohlf (Bull. math. Biol. 45, 33–40, 1983) for numbering the π _i=1 ⁿ (2i−3) possible rooted binary phylogenies and the π _i=1 ⁿ⁻¹ (2i−3) possible unrooted binary phylogenies conerning a set ofn operational taxonomic units. An illustrative example of the method is presented. It is hoped that some studies in phylogenetics will become more accessible, from the viewpoint of computational economy, by the use of this method.     

A new family of Cayley graph interconnection networks based on wreath product and its topological properties

This paper introduces a new type of Cayley graphs for building large-scale interconnection networks, namely WG_n^2m\mathit{WG}_{n}^{2m}, whose vertex degree is m+3 when n≥3 and is m+2 when n=2. A routing algorithm for the proposed graph is also presented, and the upper bound of the diameter is deduced as ⌊5n/2⌋. Moreover, the embedding properties and maximal fault tolerance are also analyzed. Finally, we compare the proposed networks with some other similar network topologies. It is found that WG_n^2m\mathit{WG}_{n}^{2m} is superior to other interconnection networks because it helps to construct large-scale networks with lower cost.     

Cytology of 2N pollen formation and pollen morphology in diploid lotus tenuis (fabaceae)

Two genotypes of Lotus tenuis Waldst & Kit. ex Willd. PI 204882, a diploid (2n = 2x = 12), were identified as producing 2n pollen (maximum = 6%). The objectives of this research were: (1) to determine the mechanism(s) of 2n pollen formation in the L. tenuis genotypes and (2) to morphologically describe n and 2n pollen using light and scanning electron microscopy. Meiotic studies revealed that 2n pollen resulted from tripolar spindles during anaphase II of microsporogenesis. The 2n pollen germinated well, although abnormal pollen tubes were observed. The genetic constitution of 2n pollen resulting from tripolar spindles is equivalent to first division restitution (FDR) of meiosis. Fresh and air-dried pollen samples exhibited differences in size and shape under light and scanning electron microscopy. The size of diploid (2n) pollen was larger than that of haploid (1n) pollen. Normal haploid (1n) pollen was globose-prolate in shape, while diploid (2n) pollen was tetrahedral in shape.     

Compressive and rarefactive DIA solitons beyond the KdV limit

The modified Gardner equation (MGE), showing the existence of compressive and rarefactive dust-ion-acoustic (DIA) solitons in a nonplanar dusty plasma (containing inertial ions, Boltzmann electrons, and negatively charged stationary dust) beyond the KdV Korteweg-de Vries (KdV) limit, is derived and numerically solved. The basic features of the compressive and rarefactive cylindrical and spherical DIA solitons, which are found to exist beyond the KdV limit, i.e., exist for μ ∼ 2/3 (where μ = Z _n n _d0/n _i0, z _d is the number of electrons residing onto the dust grain surface, n _d0(n _i0) is the dust (ion) number density at equilibrium, and μ ∼ 2/3 means that μ is not equal to 2/3, but it is around 2/3) are identified. These solitons (which can be referred to as DIA Gardner solitons (DIA-GSs)) are completely different from the KdV solitons because μ = 2/3 corresponds to the vanishing of the nonlinear coefficient of the KdV equation, and μ ∼ 2/3 corresponds to extremely large amplitude KdV solitons for which the validity of the reductive perturbation method breaks down. It is also shown that the properties of the nonplanar (cylindrical and spherical) DIA-GSs are significantly different from those of the one dimensional planar ones.     

Minimum sample sizes for identifying chromosomal fragile sites from individuals: Monte Carlo estimation

A Monte Carlo simulation procedure was used to estimate the exact level of the standardized X ² test statistic (X _s ²) for randomness in the FSM methodology for the identification of fragile sites from chromosomal breakage data for single individuals. A random-number generator was used to simulate 10 000 chromosomal breakage data sets, each corresponding to the null hypothesis of no fragile sites for numbers of chromosomal breaks (n) from 1 to 2000 and at three levels of chromosomal band resolution (k). The reliability of the test was assessed by comparisons of the empirical and nominal α levels for each of the corresponding values of n and k. These analyses indicate that the sparse and discrete nature of chromosomal breakage data results in large and unpredictable discrepancies between the empirical and nominal α levels when fragile site identifications are based on small numbers of breaks (n < 0.5 k). With n≥ 0.5 k, the distribution of X _s ² appears to be stable and non-significant differences in the empirical and nominal α levels are generally obtained. These results are inherent to the nature of the data and are, therefore, relevant to any statistical model for the identification of fragile sites from chromosomal breakage data. For FSM identification of fragile sites at α = 0.05, we suggest that n≥ 0.5 k is the minimum reliable number of mapped chromosomal breaks per individual. Received: 28 April 1997 / Accepted: 1 July 1997