Quantitative voice quality analyses of a soprano singing early music in three different performance styles

This paper considers the measurement of voice quality variations relating to three different performance styles of early music singing by a trained soprano. In particular, the various outputs available following the collection of electrolaryngographic data are presented along with acoustic analyses based on the acoustic pressure waveform to enable a comparison of the three different singing styles. Voice quality analysis is based on the output from the electrolaryngograph, that enables a measurement of fundamental period to 1 μs accuracy to be made, enabling fundamental frequency variations including vibrato to be explored. In addition, the percentage of each cycle for which the vocal folds are in contact is measured and varies between the three voice qualities providing insights into the nature of vocal fold vibration in each case. Acoustic output spectral measures are made that are not only based on traditional wide- and narrow-band but also hearing modelling spectrography. These provide a clear indication as to which portions of the spectrum are most prominent in terms of perception of the three different voice qualities. A number of features resulting from the various analyses distinguish the singing styles, thereby providing evidence that the methods used are appropriate for objective characterisation and differentiation of singing styles in early music.     

Medical and non-medical protection standards for ultrasound and infrasound

Protection from inappropriate or hazardous exposure to ultrasound is controlled through international standards and national regulations. IEC standard 60601 part 1 establishes requirements for the mechanical, electrical, chemical and thermal safety for all electro-medical equipment. The associated part 2 standard for diagnostic medical ultrasonic equipment sets no upper limits on ultrasonic exposure. Instead, safety indices are defined that are intended to advise users on the degree of thermal and mechanical hazard. At present the display of these safety indices satisfies regulatory requirements in both the USA and Europe. Nevertheless there are reservations about the effectiveness of this approach to protection management. In the USA, there are national regulatory limits on diagnostic exposure, based on acoustic output from clinical equipment in use over 20 years ago. The IEC 60601 part 2 standard for therapeutic equipment sets 3 W cm⁻² as the limit on acoustic intensity. Transducer surface temperature is controlled for both diagnostic and therapy devices.

For airborne ultrasound, interim guidelines on limits of human exposure published by the IRPA are now 2 decades old. A limit on sound pressure level of 100 dB for the general population is recommended. The absence of protection standards for infrasound relates to difficulties in measurement at these low frequencies.     

Calibration of x-ray densitometry for the measurement of coral skeletal density

A new method is proposed for the measurement of coral skeletal density by x-radiography. X-radiographs were made of sections cut from skeletons of massive corals of the genus Porites. Included on the x-ray film with each specimen were an aluminium step-wedge, a set of aragonite standards and several aluminium bars, all of measured thickness and density. The images on the developed x-ray film were scanned with a microdensitometer. Semilogarithmic plots of microdensitometer output voltage vs. thickness of the aluminium and aragonite standards provided characteristic curves, with initial linear slopes which were defined as relative linear absorption coefficients. These coefficients varied with the x-ray exposure and microdensitometer measurement conditions; however, they were consistent within one set of conditions. The relative linear absorption coefficients and densities of the standards, together with data for thickness of standard vs. film exposure, can be used to determine the density of coral specimens at points along microdensitometer traverses of their x-ray images. The bars of aluminium can be used to correct for the non-uniform irradiation of the x-ray film which is characteristic of x-ray machines.Contribution No. 299 from the Australian Institute of Marine Science     

Vision-based force measurement using neural networks for biological cell microinjection

This paper presents a vision-based force measurement method using an artificial neural network model. The proposed model is used for measuring the applied load to a spherical biological cell during micromanipulation process. The devised vision-based method is most useful when force measurement capability is required, but it is very challenging or even infeasible to use a force sensor. Artificial neural networks in conjunction with image processing techniques have been used to estimate the applied load to a cell. A bio-micromanipulation system capable of force measurement has also been established in order to collect the training data required for the proposed neural network model. The geometric characterization of zebrafish embryos membranes has been performed during the penetration of the micropipette prior to piercing. The geometric features are extracted from images using image processing techniques. These features have been used to describe the shape and quantify the deformation of the cell at different indentation depths. The neural network is trained by taking the visual data as the input and the measured corresponding force as the output. Once the neural network is trained with sufficient number of data, it can be used as a precise sensor in bio-micromanipulation setups. However, the proposed neural network model is applicable for indentation of any other spherical elastic object. The results demonstrate the capability of the proposed method. The outcomes of this study could be useful for measuring force in biological cell micromanipulation processes such as injection of the mouse oocyte/embryo.     

Correlation study of arterial blood pressure level to the amplitude of the pressure pulse waveform

Automated blood pressure measurements are usually characterized by poor operational reliability and a considerable degree of complexity in performing the measurement. This paper introduces a new technique for the indirect measurement of the systolic and diastolic blood pressure of an individual. The technique is based upon a statistically consistent relationship between the amplitude of the pulsative pressure waveform at the systolic and diastolic points, and the amplitude of pulse signals detected when the artery is fully occluded. Clinical testing and statistical analysis techniques are used to derive appropriate numerical values for these relationships. The proposed procedure thus incorporates an adaptive measurement philosophy achieving minimum observer involvement and consequently high instrument accuracy. Overall measurement errors are maintained well within proposed standards for automated sphygmomanometers.     

Body temperature and the acoustic behavior of the cicadaTibicen winnemanna (Homoptera: Cicadidae)

Tibicen winnemanna (Davis) produces a broad-band frequency- and amplitude-modulated advertisement call. Observations of the animals in the field show that the cicadas produce varied acoustic output. This work investigates the connection between the acoustic behavior of the cicada and the body temperature of the calling animal. The results show there is strong evidence to support the hypothesis that both acoustic output and song intensity are highly dependent on body temperature.     

Singing streams: Describing freshwater soundscapes with the help of acoustic indices

1. Understanding soundscapes, that is, the totality of sounds within a location, helps to assess nature in a more holistic way, providing a novel approach to investigating ecosystems. To date, very few studies have investigated freshwater soundscapes in their entirety and none across a broad spatial scale.
2. In this study, we recorded 12 freshwater streams in South East Queensland continuously for three days and calculated three acoustic indices for each minute in each stream. We then used principal component analysis of summary statistics for all three acoustic indices to investigate acoustic properties of each stream and spatial variation in their soundscapes.
3. All streams had a unique soundscape with most exhibiting diurnal variation in acoustic patterns. Across these sites, we identified five distinct groups with similar acoustic characteristics. We found that we could use summary statistics of AIs to describe daytimes across streams as well. Most difference in stream soundscapes was observed during the daytime with significant variation in soundscapes both between hours and among sites.
4. Synthesis and Application. We demonstrate how to characterize stream soundscapes by using simple summary statistics of complex acoustic indices. This technique allows simple and rapid investigation of streams with similar acoustic properties and the capacity to characterize them in a holistic and universal way. While we developed this technique for freshwater streams, it is also applicable to terrestrial and marine soundscapes.

     

Thermoelastic excitation of acoustic waves in biological models under the effect of the high peak-power pulsed electromagnetic radiation of extremely high frequency

The capability of high peak-power pulsed electromagnetic radiation of extremely high frequency (35,27 GHz, pulse widths of 100 and 600 ns, peak power of 20 kW) to excite acoustic waves in model water-containing objects and muscular tissue of animals has been experimentally shown for the first time. The amplitude and duration of excited acoustic pulses are within the limits of accuracy of theoretical assessments and have a complex nonlinear dependence on the energy input of electromagnetic radiation supplied. The velocity of propagation of acoustic pulses in water-containing models and isolated muscular tissue of animals was close to the reference data. The excitation of acoustic waves in biological systems under the action of high peak-power pulsed electromagnetic radiation of extremely high frequency is the important phenomenon, which essentially contributes to the understanding of the mechanisms of biological effects of these electromagnetic fields.     

Comparative bioacoustics: a roadmap for quantifying and comparing animal sounds across diverse taxa

Animals produce a wide array of sounds with highly variable acoustic structures. It is possible to understand the causes and consequences of this variation across taxa with phylogenetic comparative analyses. Acoustic and evolutionary analyses are rapidly increasing in sophistication such that choosing appropriate acoustic and evolutionary approaches is increasingly difficult. However, the correct choice of analysis can have profound effects on output and evolutionary inferences. Here, we identify and address some of the challenges for this growing field by providing a roadmap for quantifying and comparing sound in a phylogenetic context for researchers with a broad range of scientific backgrounds. Sound, as a continuous, multidimensional trait can be particularly challenging to measure because it can be hard to identify variables that can be compared across taxa and it is also no small feat to process and analyse the resulting high-dimensional acoustic data using approaches that are appropriate for subsequent evolutionary analysis. Additionally, terminological inconsistencies and the role of learning in the development of acoustic traits need to be considered. Phylogenetic comparative analyses also have their own sets of caveats to consider. We provide a set of recommendations for delimiting acoustic signals into discrete, comparable acoustic units. We also present a three-stage workflow for extracting relevant acoustic data, including options for multivariate analyses and dimensionality reduction that is compatible with phylogenetic comparative analysis. We then summarize available phylogenetic comparative approaches and how they have been used in comparative bioacoustics, and address the limitations of comparative analyses with behavioural data. Lastly, we recommend how to apply these methods to acoustic data across a range of study systems. In this way, we provide an integrated framework to aid in quantitative analysis of cross-taxa variation in animal sounds for comparative phylogenetic analysis. In addition, we advocate the standardization of acoustic terminology across disciplines and taxa, adoption of automated methods for acoustic feature extraction, and establishment of strong data archival practices for acoustic recordings and data analyses. Combining such practices with our proposed workflow will greatly advance the reproducibility, biological interpretation, and longevity of comparative bioacoustic studies.     

A non-invasive method of tendon force measurement

The ability to measure the forces exerted in vivo on tendons and, consequently, the forces produced by muscles on tendons, offers a unique opportunity to investigate questions in disciplines as varied as physiology, biomechanics, orthopaedics and neuroscience. Until now, tendon loads could be assessed directly only by means of invasive sensors implanted within or attached to these collagenous structures. This study shows that the forces acting on tendons can be measured, in a non-invasive way, from the analysis of the propagation of an acoustic wave. Using the equine superficial digital flexor tendon as a model, it is demonstrated that the velocity of an ultrasonic wave propagating along the main axis of a tendon increases with the force applied to this tendon. Furthermore, we show that this velocity measurement can be performed even in the presence of skin overlying the tendon. To validate this measurement technique in vivo, the ultrasonic velocity plots obtained in the Achilles tendon at the walk were compared to the loads plots reported by other authors using invasive transducers.     

To what degree of voice perturbation are jitter measurements valid? A novel approach with synthesized vowels and visuo-perceptual pattern recognition

Objective measurement of the severity of dysphonia typically requires signal processing algorithms applied to acoustic recordings. Since Lieberman (1963) introduced the concept of perturbation analysis in the area of voice, the best-known acoustic parameter in clinical practice is conventional jitter. However, jitter measurements have some critical limitations. According to a widely accepted guideline, in sustained vowels of dysphonic voices, only perturbation measures less than about 5% are reliable: this is related to period extraction methods. This limit of 5% deserves critical analysis, certainly when there are indications that some acoustic analysis programs can be applied to quite irregular voices such as substitution voices. The present experiment demonstrates that – on signals of synthesized deviant voices (sustained vowel) with moderate additive noise – different raters are able to visually identify in a very consistent way the period durations of successive cycles up to values of about 13% jitter. Furthermore, even for higher values – over 30% – the jitter % computed with the period values rated by visual perception is, for some of the raters, very comparable to the real value. This suggests that improved acoustic programs using more reliable algorithms could validly transgress the traditional limit of 5% if they demonstrate the correspondence of their computations with the true jitter values. This is now made possible by synthesizers generating artificial deviant voices that cannot be distinguished from true dysphonia, and in which the jitter put in is exactly known.     

Acoustic activity across a seabird colony reflects patterns of within-colony flight rather than nest density

Passive acoustic monitoring is increasingly being used as a cost-effective way to study wildlife populations, especially those that are difficult to census using conventional methods. Burrow-nesting seabirds are among the most threatened birds globally, but they are also one of the most challenging taxa to census, making them prime candidates for research into such automated monitoring platforms. Passive acoustic monitoring has the potential to determine presence/absence or quantify burrow-nesting populations, but its effectiveness remains unclear. We compared passive acoustic monitoring, tape-playbacks and GPS tracking data to investigate the ability of passive acoustic monitoring to capture unbiased estimates of within-colony variation in nest density for the Manx Shearwater Puffinus puffinus. Variation in acoustic activity across 12 study plots on an island colony was examined in relation to burrow density and environmental factors across 2 years. As predicted fewer calls were recorded when wind speed was high, and on moon-lit nights, but there was no correlation between acoustic activity and the density of breeding birds within the plots as determined by tape-playback surveys. Instead, acoustic indices correlated positively with spatial variation in the in-colony flight activity of breeding individuals detected by GPS. Although passive acoustic monitoring has enormous potential in avian conservation, our results highlight the importance of understanding behaviour when using passive acoustic monitoring to estimate density and distribution.     

Sounds Modulate Males’ Aggressiveness in a Cichlid Fish

Acoustic signals are produced in many fish species during agonistic or courtship interactions. A way to test the biological role of these sounds is the use of acoustic playback experiments. However, sounds are usually associated with visual displays and playback experiments performed in fish so far, often failed to match acoustic and visual stimuli. To avoid this mismatch issue, we experimentally separated or coupled visual and acoustic channels to test the role of sounds produced during male–male aggressive interactions in a cichlid fish, Metriaclima zebra. Results show that aggressive behaviour is based on visual stimuli and that acoustic signals alone never trigger aggression. Furthermore, the association between visual and acoustic channels lowers the level of aggressiveness found when fish can only interact visually. This suggests that acoustic signals used during a dispute may complement visual displays to modulate males’ behaviour by reducing their aggressiveness and the risk of escalated fights.     

Reducing aberration by inverse filtering in Fresnel zone plate transducers

Transducers employing a spatial electrode pattern in the form of a Fresnel zone plate (FZP) are useful in acoustic imaging systems for focusing an ultrasonic beam. A technique has been developed to predict the spatial acoustic output of such a transducer from a knowledge of the spatial electrode pattern. It has been shown that, due to mechanical aberration, sharp edges in the electrode pattern are not reproduced in the output pattern. The mechanism producing the aberration can be modeled as a low-pass spatial filter. A desired acoustic spatial pattern may be generated by a synthesized electrode pattern obtained through inverse filtering. The approach is to assume that the desired acoustic pattern is the output of a linear spatial system and then to synthesize the electrode pattern that would produce it by multiplying it with the inverse of the aberrating low-pass filter. The synthesized electrode pattern will then generate an acoustic pattern which replicates the desired acoustic pattern very closely.     

System for continuous high-resolution measurement of distances in the eye

We describe a new system for accurate measurement of intraocular distances; it is used in conjunction with standard A-scan ultrasound equipment. A processing unit has been developed which enables selection of time intervals between echoes. Up to four intervals can be chosen and simultaneously measured. The output of the system is derived from a pulse duration-to-voltage converter which presents an output voltage proportional to the selected time interval. In this way variations in intraocular distances larger than about 0.01 mm can be detected.     

Light distribution and calibration of commercial PDT LED arrays.

Commercial photodynamic therapy (PDT) light sources are supplied with no evidence of traceability to national measurements standards to validate indicated delivered dose. Also, the spatial distribution of the radiant energy is not disclosed. This means that there is no way for the user to be able to verify that the required dose is being delivered to the appropriate area of the lesion. To this end, a simple method, traceable to national standards, is described and applied to an investigation of two commercial LED arrays. In one case, the dose fell to 38% of that received at the central area at a distance of only 2 cm. In the other, the output was more uniform over a larger area but the maximum irradiance was not at the centre of the field. All of these inhomogenieties were taken into account when the actual light dose delivered to the patient was calculated in the method described. This ensured transparent traceability in PDT dosimetry.     

Respiratory measurements of cardiac output: from elegant idea to useful test.

The measurement of cardiac output was first proposed by Fick, who published his equation in 1870. Fick's calculation called for the measurement of the contents of oxygen or CO2 in pulmonary arterial and systemic arterial blood. These values could not be determined directly in human subjects until the acceptance of cardiac catheterization as a clinical procedure in 1940. In the meanwhile, several attempts were made to perfect respiratory methods for the indirect determination of blood-gas contents by respiratory techniques that yielded estimates of the mixed venous and pulmonary capillary gas pressures. The immediate uptake of nonresident gases can be used in a similar way to calculate cardiac output, with the added advantage that they are absent from the mixed venous blood. The fact that these procedures are safe and relatively nonintrusive makes them attractive to physiologists, pharmacologists, and sports scientists as well as to clinicians concerned with the physiopathology of the heart and lung. This paper outlines the development of these techniques, with a discussion of some of the ways in which they stimulated research into the transport of gases in the body through the alveolar membrane.     

Acoustic diversity in Lake Malawi’s rock-dwelling cichlids

The cichlids of Lake Malawi are one of the world’s most species rich and phenotypically diverse groups of extant vertebrates. The extraordinary variability of this group’s color patterns, reproductive behaviors, and trophic morphologies are well documented. More recently, an additional axis of phenotypic diversity has been identified. Lake Malawi cichlids have been shown to use species-specific acoustic communication in both aggressive and reproductive encounters. However, documentation of acoustic signals used by this group is limited to a small number of taxa observed within the confines of the laboratory. This study examines the acoustic signals produced by six species spanning four genera of rock-dwelling cichlids recorded in their natural habitat, the shallow waters surrounding Thumbi West Island, Lake Malawi. Four acoustic parameters were quantified and compared between species: trill duration, number of pulses per trill, pulse duration, and pulse period. Using these characteristics, sympatric species within the genus Maylandia were easily distinguished. Furthermore, a comparison of this data to previously published acoustic data reveals possible geographic dialects within species.     

Multilayer adaptive control of continuous bioprocesses using optimising control technique. Case study: Bakers' yeast culture

High costs associated with many fermentation processes in an increasingly competitive industry make any prompt application of modern control techniques to industrial bioprocesses very desirable. However, this is often hampered by the lack of adequate mathematical models, on the one hand, and by the absence of continuous, on-line measurement of the most relevant process variables, on the other hand. This paper addresses these problems and offers a new strategy to control continuous bioprocesses using a hierarchical structure such that neither structured process models nor continuous measurement of all relevant variables have to be available. The control system consists of two layers. The lower layer represents a dynamic adaptive follow-up control of a continuously measured output — in our case dissolved oxygen concentration. This variable is supposed to be strongly correlated with the key output variable — in our case cellular concentration which is not continuously available for measurement. The higher layer is then designed to maintain a desired profile of the process key output using a set-point optimising control technique. The Integrated System Optimisation and Parameter Estimation method used operates on an appropriately chosen steady-state performance criterion. A prerequisite for successful application of the proposed approach is an approximate steady-state model, describing the relationship between the measured output and the process key output variable. Furthermore, occasional in situ, off-line or laboratory measurement values of the key output variable are needed. Promising simulation results of the biomass concentration control, by manipulating the air flow-rate in the continuous bakers' yeast culture are presented.