Molecular evolution and structure--function relationships of the superoxide dismutase gene families in angiosperms and their relationship to other eukaryotic and prokaryotic superoxide dismutases

This study assesses whether the phylogenetic relationships between SODs from different organisms could assist in elucidating the functional relationships among these enzymes from evolutionarily distinct species. Phylogenetic trees and intron positions were compared to determine the relationships among these enzymes. Alignment of Cu/ZnSOD amino acid sequences indicates high homology among plant sequences, with some features that distinguish chloroplastic from cytosolic Cu/ZnSODs. Among eukaryotes, the plant SODs group together. Alignment of the Mn and FeSOD amino acid sequences indicates a higher degree of homology within the group of MnSODs (>70%) than within FeSODs (approximately 60%). Tree topologies are similar and reflect the taxonomic classification of the corresponding species. Intron number and position in the Cu/Zn Sod genes are highly conserved in plants. Genes encoding cytosolic SODs have seven introns and genes encoding chloroplastic SODs have eight introns, except the chloroplastic maize Sod1, which has seven. In Mn Sod genes the number and position of introns are highly conserved among plant species, but not among nonplant species. The link between the phylogenetic relationships and SOD functions remains unclear. Our findings suggest that the 5' region of these genes played a pivotal role in the evolution of function of these enzymes. Nevertheless, the system of SODs is highly structured and it is critical to understand the physiological differences between the SODs in response to different stresses in order to compare their functions and evolutionary history.     

Analysis of variants affecting the catalase developmental program in maize scutellum

Summary The catalase of maize scutella is coded for by two loci, Cat1 and Cat2, which are differentially expressed in this tissue during early seedling growth. Two variant lines have been previously identified in which the developmental program for the expression of the Cat2 structural gene in the scutellum has been altered. Line R6–67 exhibits higher than normal levels of CAT-2 catalase in this tissue after four days of postgerminative growth. This phenotype is controlled by a temporal regulatory gene designated Car1. Line A16 exhibits a CAT-2 null phenotype. Further analysis of Car1 verifies the initial indication that it is trans-acting and exhibits strict tissue (scutellum) specificity. A screen of other available inbred lines uncovered eight additional catalase high-activity lines. All eight lines exhibit significantly higher than normal levels of CAT-2 protein. Two of these lines have been shown to be regulated by Car1 as in R6–67. Another line (A338) uncovered during the screen exhibits a null phenotype for CAT-2 protein and resembles A16. Catalase activity levels are low in the scutellum and no CAT-2 CRM (cross-reacting material) is present in the tissues of this line. Also, unlike most maize lines, CAT-2 cannot be induced in the leaf tissue of A338 upon exposure to light. Finally, a single line (A337), demonstrating a novel catalase developmental program, was identified.     

Effects of cadmium on antioxidant enzyme and photosynthetic activities in leaves of two maize cultivars

Effects of cadmium (Cd(2+)) on photosynthetic and antioxidant activities of maize (Zea mays L.) cultivars (3223 and 32D99) were investigated. Fourteen-day-old cultivar seedlings were exposed to different Cd concentrations [0, 0.3, 0.6 and 0.9mM Cd(NO(3))(2).4H(2)O] for 8 days. The results of chlorophyll fluorescence indicated that different levels of Cd affected photochemical efficiency in 3223 much more than that in 32D99. In parallel, the level of Cd at 0.9mM caused oxidative damage but did not indicate cessation of PSII activity of the cultivars; plant death was not observed at highly toxic Cd levels. Additionally, the increase in Cd concentration caused loss of chlorophylls and carotenoid and membrane damage in both cultivars, but greater membrane damage was observed in 3223 than in 32D99. Depending on Cd accumulation, a significant reduction in dry biomass was observed in both cultivars at all Cd concentrations. The accumulation of Cd was higher in roots than in leaves for both cultivars. Nevertheless, cultivar 3223 transferred more Cd from roots to leaves than did 32D99. On the other hand, our results suggest that there were similar responses in SOD, APX and GR activities with increasing Cd concentrations for both cultivars. However, POD activity significantly increased at highly toxic Cd levels in 32D99. This result may be regarded as an indication of better tolerance of the Z. mays L. cultivar 32D99 to Cd contamination.     

中国17个优良玉米自交系的分子标记杂合性及其与杂交种性状的关系研究

在玉米单交种育种中 ,鉴定高产杂交种和具有优良特性的自交系是一个重要的问题。研究以 1 7个优良玉米自交系为亲本 ,按照双列杂交配组合 ,利用 RAPD技术分析了 1 7个自交系的多态性以及 RAPD标记与 9个重要农艺性状 (包括产量 )的关系。基于 RAPD标记计算的相似系数聚类将 1 7个自交系分为 5个类群 ,经分析与系谱亲缘关系基本一致。杂交种性状及其特殊配合力与亲本间的遗传距离是高度相关的 ,与聚类前比较 ,聚类后平均遗传距离与平均产量、平均特殊配合力的相关系数显著提高 ,类间平均产量高于类内平均产量。RAPD技术可揭示优良玉米自交系的系谱亲缘关系 ,将自交系划分成不同的类群 ,从而为选择类间自交系杂交 ,进行亲本选配和分子标记辅助育种提供一种方法。     

Contribution of an arbuscular mycorrhizal fungus to the uptake of cadmium and nickel in bean and maize plants

Two experiments were carried out in pots with three compartments, a central one for root and hyphal growth and two outer ones which were accessible only for hyphae of the arbuscular mycorrhizal fungus, Glomus mosseae ([Nicol. and Gerd.] Gerdemann and Trappe). In the first experiment, mycorrhizal and nonmycorrhizal bean (Phaseolus vulgaris L.) plants were grown in two soils with high geogenic cadmium (Cd) or nickel (Ni) contents. In the second experiment, mycorrhizal and nonmycorrhizal maize (Zea mays L.) or bean plants were grown in a non-contaminated soil in the central compartment, and either the Cd- or Ni-rich soil in the outer compartments. In additional pots, mycorrhizal plants were grown without hyphal access to the outer compartments. Root and shoot dry weight was not influenced by mycorrhizal inoculation, but plant uptake of metals was significantly different between mycorrhizal and nonmycorrhizal plants. In the first experiment, the contribution of mycorrhizal fungi to plant uptake accounted for up to 37% of the total Cd uptake by bean plants, for up to 33% of the total copper (Cu) uptake and up to 44% of the total zinc (Zn) uptake. In contrast, Ni uptake in shoots and roots was not increased by mycorrhizal inoculation. In the second experiment, up to 24% of the total Cd uptake and also up to 24% of the total Cu uptake by bean could be attributed to mycorrhizal colonisation and delivery by hyphae from the outer compartments. In maize, the mycorrhizal colonisation and delivery by hyphae accounted for up to 41% of the total Cd uptake and 19% of the total Cu uptake. Again, mycorrhizal colonisation did not contribute to Ni uptake by bean or maize. The results demonstrate that the arbuscular mycorrhizal fungus contributed substantially not only to Cu and Zn uptake, but also to uptake of Cd (but not Ni) by plants from soils rich in these metal cations. Deceased 21 September 1996 Deceased 21 September 1996     

Quantitative trait loci for plant height in four maize populations and their associations with qualitative genetic loci

Summary We report that plant height quantitative trait loci (QTLs) identified in a given small population are not consistent with QTLs identified in other small populations, and that most QTLs are in close proximity to mapped qualitative genetic loci. These observations provide evidence to support the hypothesis that qualitative genetic loci are the same loci that affect quantitative traits, and affirm that these modest experiments probably identify real QTLs.     

Dosage regulation of Zea mays homeobox (ZmHox) genes and their relationship with the dosage-sensitive regulatory factors of Shrunken 1 (Sh1) in maize

In gene dosage studies on the expression of the maize Shrunken I gene several dosage-sensitive regulatory factors were identified that modulate Sh 1 mRNA levels in various aneuploids. ZmHox 1a and 1b have been shown to interact with the Sh1 promoter sequences in vitro. The present study was conducted to test whether these molecularly defined regulatory genes are subject to dosage modulation and to determine whether ZmHox 1a and 1b are involved with the dosage sensitive modification of Sh1 expression. The result was that ZmHox 1a and 1b were affected by several transacting dosage modifiers and that both genes exhibited a structural gene dosage effect but did not modulate Sh1 mRNA levels. For some chromosomal regions, a correlation was found between the dosage regulation of Sh1 and that of ZmHox 1a, while other effects were not correlated. The results suggest that the dosage effects on Sh1 are not mediated by ZmHox 1a or 1b, but interestingly Sh1 and ZmHox 1a share some dosage-regulatory effects. Dev Genet 20:67–73, 1997. © 1997 Wiley-Liss, Inc.     

铬胁迫下不同品种玉米种子和幼苗的反应及其与铬积累的关系

研究了铬胁迫对玉米(6个品种)种子萌发初期一些生理生态特征的影响,及各种生理指标与幼苗铬积累量间的关系,结果表明,随铬处理浓度的加大而玉米种子萌发率逐渐降低,幼苗株高、根长、鲜物质量和干物质量均逐渐降低;脯氨酸、吸收铬量、可溶性蛋白质、超氧负离子、丙二醛含量逐渐上升,超氧化物歧化酶(SOD)、过氧化物酶(POD)和过氧化氢酶(CAT)活性则逐渐增加,根系活力和硝酸还原酶活性在不同品种玉米中差异较大;所有供试玉米品种中,丙二醛含量、CAT和SOD活性与幼苗铬积累量之间存在显著或极显著的正相关关系。不同玉米品种对Cr3+毒害的反应表现不同,存在品种间差异。     

Effects of High Temperature on Chlorophyll Fluorescence Induction and the Kinetics of Far Red Radiation-Induced relaxation of apparent F0 in maize leaves

Temperature dependence (25–50 °C) of chlorophyll (Chl) fluorescence induction, far-red radiation (FR)-induced relaxation of the post-irradiation transient increase in apparent F₀, and the trans-thylakoid proton gradients (pH) was examined in maize leaves. Temperatures above 30 °C caused an elevation of F₀ level and an enhancement of F₀ quenching during actinic irradiation. Millisecond delayed light emission (ms-DLE), which reflects the magnitude of pH, decreased strikingly above 35 °C, and almost disappeared at 50 °C. It indicates that the heat-enhanced quenching of F₀ under actinic irradiation could not be attributed mainly to the mechanism of pH-dependent quenching. The relaxation of the post-irradiation transient increase in apparent F₀ upon FR irradiation could be decomposed into two exponential components (₁ = 0.7–1.8 s, ₂ = 2.0–9.9 s). Decay times of both components increased with temperature increasing from 25 to 40–45 °C. The bi-phasic kinetics of FR-induced relaxation of the post-irradiation transient increase in apparent F₀ and its temperature dependence may be related to plastoquinone (PQ) compartmentation in the thylakoid membranes and its re-organisation at elevated temperature.     

Effects of water stress on the gas exchange,the activities of some enzymes of carbon and nitrogen metabolism,and on the pool sizes of some organic acids in maize leaves

Water-stressed maize (Zea mays L.) leaves showed a large decrease in leaf conductance during photosynthesis. Net CO₂ uptake and evaporation declined fast at mild stress (=–0.6 to –1.0 MPa) and slower at more severe stress (=–1.0 to -1.2 MPa), whereas the CO₂ concentration in the intercellular spaces (C_i) did not drop to the CO₂ compensation point. The activities of the enzymes of photosynthetic carbon metabolism tested in this study dropped by approx. 30% at =-1.2 MPa. Glutamine synthetase activity was unaffected by water stress, whereas the activity of nitrate reductase was almost completely inhibited. The decline of enzyme activities in relation to was correlated with a concomitant decrease in the content of total soluble protein of the stressed leaves. The total leaf pools of malate, pyruvate and oxaloacetate decreased almost linearly in relation to , thus obviously contradicting the almost constant C_i. In comparison to the controls (=0.6 MPa) the content of citrate and isocitrate increaed markedly at =-0.9 MPa and decreased again at =-1.2 MPa.Abbreviations PCR photosynthetic carbon reduction cycle - PCO photosynthetic carbon oxidation cycle - PEP phosphoenolypyruvate - RuBP ribulose-1,5-bisphosphate     

Effect of nitrogen form on maize response to drought stress

Two hybrids of maize (Zea mays L.) differing in resistance to drought, were grown in chernozem soil in a greenhouse and were fertilized with two different forms of nitrogen: Ca(NO₃)₂ and (NH₄)₂SO₄ in concentrations corresponding to 100 kg of N ha^-1. After emergence of the 4th leaf, plants were exposed to drought. During the drought period, the parameters of plant water status (water potential, osmotic potential, turgor pressure and relative water content) and chlorophyll a+b concentration were monitored every two days. N and K concentration and accumulation over the drought period were also monitored.Next to differences in adaptability of the two hybrids to drought, the results demonstrate different adaptability of NH₄ and NO₃-treated plants within each hybrid. NH₄-plants of each hybrid maintain higher turgor pressure during the drought by better osmotic adaptation. Especially significant differences appear between chlorophyll (a+b) values of NH₄ and NO₃-treated plants and as affected by drought. Chlorophyll concentrations of NH₄-plants are higher than those of NO₃-plants both in control and droughted plants. NH₄ plants show a characteristic initial chlorophyll increase at the beginning of the drought period while in NO₃ plants chlorophyll constantly decreases throughout the whole drought period. The influence of the nitrogen form on chlorophyll concentration changes during drought does not appear to be affected by regulation of the K concentration.     

Resistance of maize to Meloidogyne arenaria and Meloidogyne javanica

Summary A diallel cross of eight maize, Zea mays L., inbred lines was analyzed for reaction to two species of root-knot nematodes, Meloidogyne arenaria (Neal) Chitwood and M. javanica (Treub) Chitwood. Egg production following inoculation of F₁ hybrid seedlings with nematode eggs was determined in a greenhouse experiment. Data were analyzed using Griffing's Method 4, Model I. General combining ability was a significant source of variation in egg production of both M. arenaria and M. javanica; specific combining ability was not a significant source of variation for either. The correlation between egg production of the two nematode species on the 28 F₁ hybrids was highly significant. Hybrids with Mp313 or SC213 as one parent were the most resistant to both species. This indicates that germ plasm is available for developing inbred lines and hybrids with resistance to both M. arenaria race 2 and M. javanica.This article is a contribution of the Crop Science Research Laboratory, U.S. Department of Agriculture, Agricultural Research Service, in cooperation with the Mississippi Agricultural and Forestry Experiment Station, Journal No. J-7481.     

Wounding stress induces alcohol dehydrogenase in maize and lettuce seedlings

To understand the effect of wounding stress on alcohol dehydrogenase(ADH, EC 1.1.1.1) in monocotyledonous and dicotyledonous plants, maize(Zea mays L.) and lettuce (Lactucasativa L.) seedlings were subjected to wounding stress and ADHactivity and abscisic acid (ABA) concentration were determined. In response tothe stress, the ADH activity in seedlings of both species increased rapidly asaresult of increased synthesis of the ADH. At 12 h after thestress,the activities in the wounded lettuce and maize seedlings, respectively,increased to 1.7- and 1.5-fold of that in non-stressed seedlings. Woundingstress also increased the concentration of endogenous ABA during the first 6h in both seedlings. The maximum increased levels of ABA in thelettuce and maize seedlings were 4.9- and 4.7-fold of that in the non-stressedseedlings, respectively.     

Molecular evolution and functional specialization of chalcone synthase superfamily from Phalaenopsis Orchid

Plant genomes appear to exploit the process of gene duplication as a primary means of acquiring biochemical and developmental flexibility. The best example is the gene encoding chalcone synthase (CHS, EC2.3.1.74), the first committed step in flavonoid biosynthesis. In this study, we examined the molecular evolution of three CHS family members of Phalaenopsis including a novel chs gene (phchs5), which is slowly evolved. The inferred phylogeny of the chs genes of Phalaenopsis with other two orchid plants, Bromoheadia finlaysoniana and Dendrobium hybrid, suggested that gene duplication and divergence have occurred before divergence of these three genera. Relatively quantitative RT-PCR analysis identified expression patterns of these three chs genes in different floral tissues at different developmental stages. Phchs5 was the most abundantly expressed chs gene in floral organs and it was specifically transcribed in petal and lip at the stages when anthocyanin accumulated (stage1–4). Phchs3 and phchs4 were expressed at much lower levels than phchs5. Phchs3 was expressed in pigmented tissue (including lip, petal and sepal) at middle stages (stages 2–4) and in colorless reproductive tissue at late stage (stage 5). Phchs4 was only expressed in petal at earlier stages (stage 1–3) and in lip at middle stage (stage 4). These results present new data on differentiation of gene expression among duplicate copies of chs genes in Phalaenopsis.     

Photoperiod and root-zone temperature: Interacting effects on growth and mineral nutrients of maize

Factorial effects of photoperiod (6, 12 and 18 h) and root-zone temperatures (9, 15 and 21°C) on the growth and mineral nutrient concentration and partitioning in maize (Zea mays L.) were investigated. Strong interactions were observed between photoperiod and root-zone temperature on the growth and concentration of numerous mineral elements in the plant tops and roots. For example, a threefold increase in photoperiod (from 6 to 18 h) did not affect the growth of tops or roots if the root-zone temperature was 9°C but increased them each by eightfold if the root-zone temperature was 21°C. On the other hand, raising the root-zone temperature from 9 to 21°C increased the growth of tops and root each by ca. threefold when plants were grown with 6 h of light. At 18 h photoperiod, however, plant growth was increased 20- to 30-fold by the same rise in the root-zone temperature. The concentrations of different mineral elements in the roots and tops were affected quite differently by the interacting effects of photoperiod and root-zone temperature. In general, increasing the photoperiod at a given root-zone temperature decreased the concentrations of elements while increasing the root-zone temperature at a given photoperiod increased the concentrations of most elements in both roots and tops. The exceptions were K and B which reacted opposite to each other: K concentration in both tops and roots was relatively insensitive to photoperiod but very sensitive to root-zone temperature and the reverse was true for boron. The relative insensitivity of plant growth to increased day length as long as the roots are subjected to suboptimal (low) soil temperatures may have survival significance and point to the predominant role of root temperature over that of day length in the early growth of maize. A possible mechanism by which photoperiod and root-zone temperature might interactively alter the nutrient uptake by the roots is discussed.     

Estimates of gene frequencies in two heterotic maize populations

Summary The present study was undertaken to obtain information on average gene frequency in two heterotic populations of maize (Zea mays L.), Mezcla Amarillo Selection (MAS) and J607. Sixty-four male plants were taken in each of the populations and each of these were crossed to a different set of eight plants, four of which belonged to the same population and four to the other population. This resulted in two groups of intra-population (within MAS and within J607) and two groups of inter-population (MAS X J607 and J607 X MAS) progenies. Each group consisted of 256 full-sib progenies on the pattern of the North Carolina Design I mating system. The male plants were selfed to produce 64 S₁ prgenies in each population. The materials were evaluated at two diverse locations, Ludhiana and Gurdaspur, for grain yield, ear length, ear girth, number of kernel rows, plant height, ear height and days to silk. An incomplete block design with two replications were used. The plot consisted of a 5 m long row. Ratios of estimated genetic components of variance and covariance were compared with corresponding theoretical ratios computed for a single locus for various gene frequencies and levels of dominance, and approximate ranges of the gene frequencies and their relative magnitude were worked out in the two populations. The average frequency of favourable genes for plant height was estimated as 0.6 in MAS and 0.8 in J607. For grain yield the average gene frequency was 0.8 to 0.9 in MAS and 0.7 to 0.8 in J607 whereas for ear height it was 0.5 to 0.7 in MAS and 0.4 to 0.6 in J607. The gene frequency in the two populations seemed to be similar for days to silk, ear length, ear girth and kernel rows.