Interspecific patterns for egg and clutch sizes of African Bufonidae (Amphibia: Anura)

Little is known about reproductive trade-offs in African amphibians, but such data, particularly in the form of quantitative measurements, are a key for investigating life history evolution. Here we compile and analyze known data on African bufonids from published material and new data from preserved museum specimens, to investigate interspecific patterns of egg and clutch sizes variation. Our data is a composite of mixed sources, including ova data from dissected females and laid clutches from observations in the field. Our study shows that, as body size increases, clutch size increases but egg size decreases, and when correcting for body size, egg size is inversely correlated with clutch size. These parameter interactions however, are different for different reproductive modes. In free-swimming larval developing species, the same trends are recovered, but for lecithotrophic viviparous species no significant correlations could be recovered for clutch size and body size nor for the trade-off between clutch size and egg size, and egg size is positively related to body size. The egg size of Nimbaphrynoides occidentalis (Angel, 1943) is a clear outlier, which may be due to its matrotrophic viviparous reproduction. In addition, we observed no statistical difference between ova data collected from dissections and laid clutch data from field observations, which suggests that such a mixed dataset has utility in comparative analyses.     

Comparative analysis of feeding habits and dietary niche breadth in skates: the importance of body size,snout length,and depth

Skates (Elasmobranchii, Rajiformes) are a morphologically conservative group of bentophagous chondrichthyan fishes with a high degree of endemism, that occur on marine soft bottoms. Subtle morphological aspects and bathymetric distribution are traits that vary among skate species that could have implications for their feeding ecology. We test how body size, snout length and bathymetric distribution influence the feeding habits and dietary niche breadth in skates using data on 71 species taken from the literature. We hypothesized that snout length has an effect on diet composition. We also hypothesized that dietary niche breadth increases with increasing depth range and decreases with increasing body size of skate species. Generalized additive models for location scale and shape were fitted with taxonomic level (genera nested within family) included as a random effect term in each model. A model selection approach to test the level of support for alternative models was applied. We found that skate species that forage on large prey have the largest body size and skate species with the smallest body size prey on small and medium-sized invertebrates. The results indicated that body size has an effect on feeding habits of skates, whereas an effect of snout length was not supported. Bathymetric variables have an effect on the diet of skates. Our prediction that dietary niche breadth increases with increasing depth range and decreases with increasing body size of skate species was supported in part: in a first phase the relationship between dietary niche breadth and body size is positive, then in a second phase, including species larger than 1000 mm total length, the relationship become negative.     

Variation in the intraspecific relationship between fish length and intensity of parasitic infection: biological and statistical causes

In a meta-analysis, the overall mean correlation between fish length and the intensity of parasitic infections derived from 76 different host–parasite species was positive but weak and non-significant, following corrections for sample size. Whether the parasites were acquired by ingestion or by skin contact had no influence on the strength of the relationship. For cestodes, larval digeneans, and gnathiid isopods, however, the mean correlation between fish length and intensity of infection was significant. Some statistical parameters influenced the strength of the raw correlations computed within samples and thus led to over- or under-estimation of the true relationship. Sample size correlated negatively with the value of the correlation coefficients, whereas range in both fish lengths and intensities of infection correlated positively with the value of the correlation coefficients. Distinguishing between statistical noise and the biological processes shaping the size v. intensity relationship will be important if this relationship is to be incorporated into fish population models.     

Determinants of territory size in the pomacentrid reef fish,Parma victoriae

Summary Factors governing the size of territories defended by the pomacentrid reef fish, Parma victoriae, were investigated, prompted by contradictory predictions in the literature concerning the effects of food supply and competitors. Observations were carried out over the non-breeding period (March–October) on a medium density population in which territories were partially contiguous. The territory size of adult fish varied between 3 and 26 m², and was inversely correlated with local densities of conspecifics. The same range in territory size was found for both males and females, which did not differ in the time they spent on territory defence and foraging activities. No correlation existed between territory size and the abundance of algal food, body size, age or time spent on territory defence. Also, there was little variation in territory size over time, despite seasonal changes in the abundance of food algae.Experimental reduction of food supplies on isolated territories of males and females had no effect on territory size. In a higher density habitat an experiment was carried out in which population density and food abundance were simultaneously manipulated. This showed that territory size was primarily determined by intraspecific interactions, as territories exhibited considerable increases in size upon removal of neighbours. No changes in the size of defended areas resulted from either artificial increases or decreases of food levels. There were also no changes in the time spent on defence of territories, foraging time or feeding rates associated with food manipulations or territory expansion, which suggested that food was not a limited resource. This conflicted with current theories proposed to explain territory defence and expansion. It is hypothesized that intraspecific interactions constrain territory size well below the optimum in terms of the abundance of preferred food algal species.     

An evaluation of the use of branching fire-corals (Millepora spp.) as refuge by reef fish in the Abrolhos Bank, eastern Brazil

Branching scleractinians provide fish with critical refuge against predation. While in the Caribbean and Indo-Pacific regions they are conspicuous elements of the reef community, in the tropical Southwestern Atlantic (Brazil) branching corals are lacking and massive forms dominate. The only branching forms that occur in Brazil are stinging fire-corals of genus Millepora (Hydrozoa). Preliminary observations showed that several fish species seek refuge within fire-corals in Brazil, suggesting that they may replace the functional role played by scleractinians in other regions. Here, the association of fishes to individual fire-coral colonies (Millepora alcicornis and M. brasiliensis) and the relationship between fire-coral cover and fish abundance was studied in eastern Brazil. A total of 38 fish species from 18 families (37?% of the regional species pool) were recorded within fire-corals. Most records were of relatively small-bodied fishes and juveniles of large-bodied fishes. Comparative observations between day and night indicated that fire-corals are used as sleeping sites by a few species. Volume of colonies was positively correlated with fish abundance and species richness. Over a large spatial scale (tens of kilometers) fire-coral cover had a positive and significant influence on the abundance of three fish species only (Abudefduf saxatilis, Acanthurus coeruleus and Microspatodon chrysurus). Although physical attributes of colonies and fire-coral cover may help to account for some of the spatial variability in fish abundance, fire-corals may be considered as an alternative instead of a critical microhabitat for fish. The advantages and drawbacks of living in a branching and stinging environment are discussed.     

Body size, egg size, and their interspecific relationships with ecological and life history traits in butterflies (Lepidoptera: Papilionoidea, Hesperioidea)

The interspecific relationships between egg size and body size in butterflies (Papilionoidea and Hesperiidae), and between size and egg and larval development time, larval trophic specificity, foodplant structure, climate, and phenology were investigated based on a sample of more than 1180 species. The independent contrasts mediod was used to avoid taxonomy-dependent results. Egg size is allometrically related to adult wing length by a slope of 0.43. Based on a subset of species, fecundity is correlated to adult body size, and there is evidence for a compromise between egg number and egg size (relative to adult size) across species. Butterfly size increases in correlation to the mean annual temperature of me species geographic range, but decreases in relation to increased aridity (or die length of the dry season). Larger butterflies tend to have longer larval development times, use large or structurally complex host plants, and are more likely to lay their eggs in batches, irrespective of climate. Larger eggs tend to develop more slowly, and give rise to larvae with longer developmental periods that will result in larger adults. No evidence was found to support a relationship between butterfly body size and polyphagy. A complex pattern of interrelationships links body size (and egg size) to other traits, although correlations other than mat between egg size and body size are generally low. The results suggest the necessity of separating climate and seasonality into components that are relevant to insect life histories in comparative studies.     

Stability of behavioral syndromes but plasticity in individual behavior: consequences for rockfish stock enhancement

This study investigated behavioral syndromes, which are defined as correlations between behaviors. Behavioral syndromes can lead to the unintentional alteration of a wide range of behavioral traits of hatchery fish if unintentional selection on one behavior leads to selection on a correlated behavior. Specifically, this study used brown rockfish, Sebastes auriculatus, to test the hypothesis that a fish that feeds at high rates in the absence of a predator also takes more risks when a predator is present, and that through such a correlation, unintentional hatchery selection for high feeding rates may also lead to changes in risk taking behavior (here defined as behavior that increases predation risk). Behavioral syndromes were found—feeding behavior in the absence of a predator tended to correlate positively with both feeding behavior in the presence of a predator model and time near the model. These syndromes were stable through time—that is, the same correlations appeared 10 days later when the behavioral assays were repeated. However individual behavior was inconsistent (plastic). A fish could both feed and take risks at high rates on Day 1, but then both feed and take risks at low rates on Day 10. Thus, while behavioral syndromes were stable (i.e. present in both rounds 1 and 2), individuals were plastic in their behavior (i.e. inconsistent between rounds 1 and 2). After 16 weeks of hatchery rearing, neither growth nor survival were predicted by behavior. It is suggested that the behavioral plasticity within individuals through time makes consistent selection for strong feeders less likely, and that species with more plastic behavior may be less susceptible to unintentional selection on behavioral syndromes than species with behavior that is more fixed.     

Length-dependent changes in egg size and fecundity in females, and brooded embryo size in males, of fork-tailed catfishes (Pisces: Ariidae) from the Sepik River, Papua New Guinea, with some implications for stock assessments

Data suggest that mature egg weight is positively correlated to female parent length in all five species of fork-tailed catfish studied. Embryo weight is positively correlated with the length of the male mouthbrooding parent in the four species where data are available. Non-random mate pairing is probably between fish of equivalent size. Fecundity appears to be linearly related to female fish length in all species. There is no significant correlation between fecundity and female weight, probably because egg size increases with fish size. Low fecundities and breeding behaviour suggest that recruitment is likely to be highly density-dependent and the stocks vulnerable to increased mortality (fishing). Changes in egg size with fish size may account for deviations from a cube relationship between fecundity and fish length in other species. The relevance of this to other fish stock assessments is discussed. Attention is drawn to possible changes in egg size with fish length which could affect recruitment in fished stocks, depending on the specific relationship and the length at which mature fish are caught.     

Bioaccumulation of Trace Mercury in Trophic Levels of Benthic, Benthopelagic, Pelagic Fish Species, and Sea Birds from Arvand River, Iran

In this study, concentration of mercury was determined in the trophic levels of benthic, benthopelagic, pelagic fish species, and river birds from Arvand River, located in the Khuzestan province in the lowlands of southwestern Iran at the head of the Persian Gulf. The order of mercury concentrations in tissues of the fish species was as follows: liver>gill>muscle and in tissues of the kingfisher species was as follows: feather>liver>kidney>muscle. Therefore, liver in fish and feather in kingfisher exhibited higher mercury concentration than the other tissues. There was a positive correlation between mercury concentrations in fish and kingfisher species with size of its food items. We expected to see higher mercury levels in tissues of female species because they are larger and can eat larger food items. The results of this study show that the highest mean mercury level were found in the kingfisher (Anas crecca), followed by benthic (Epinephelus diacanthus), benthopelagic (Chanos chanos), and pelagic fish (Strongylura strongylura). Mean value of mercury in fish species, S. strongylura were (0.61 μg g^?1 dry weight), C. chanos (0.45 μg g^?1 dry weight), E. diacanthus (0.87 μg g^?1 dry weight), and in kingfisher species A. crecca was (2.64 μg g^?1 dry weight). Significant correlation between mercury concentration in fish and kingfisher may be related to high variability of mercury in the fish.     

Allometric scaling of intraspecific space use

Allometric scaling relationships enable exploration of animal space-use patterns, yet interspecific studies cannot address many of the underlying mechanisms. We present the first intraspecific study of home range (HR) allometry relative to energetic requirements over several orders of magnitude of body mass, using as a model the predatory fish, pike Esox lucius. Analogous with interspecific studies, we show that space use increases more rapidly with mass (exponent = 1.08) than metabolic scaling theories predict. Our results support a theory that suggests increasing HR overlap with body mass explains many of these differences in allometric scaling of HR size. We conclude that, on a population scale, HR size and energetic requirement scale allometrically, but with different exponents.     

Complementarity of Rotating Video and Underwater Visual Census for Assessing Species Richness,Frequency and Density of Reef Fish on Coral Reef Slopes

Estimating diversity and abundance of fish species is fundamental for understanding community structure and dynamics of coral reefs. When designing a sampling protocol, one crucial step is the choice of the most suitable sampling technique which is a compromise between the questions addressed, the available means and the precision required. The objective of this study is to compare the ability to sample reef fish communities at the same locations using two techniques based on the same stationary point count method: one using Underwater Visual Census (UVC) and the other rotating video (STAVIRO). UVC and STAVIRO observations were carried out on the exact same 26 points on the reef slope of an intermediate reef and the associated inner barrier reefs. STAVIRO systems were always deployed 30 min to 1 hour after UVC and set exactly at the same place. Our study shows that; (i) fish community observations by UVC and STAVIRO differed significantly; (ii) species richness and density of large species were not significantly different between techniques; (iii) species richness and density of small species were higher for UVC; (iv) density of fished species was higher for STAVIRO and (v) only UVC detected significant differences in fish assemblage structure across reef type at the spatial scale studied. We recommend that the two techniques should be used in a complementary way to survey a large area within a short period of time. UVC may census reef fish within complex habitats or in very shallow areas such as reef flat whereas STAVIRO would enable carrying out a large number of stations focused on large and diver-averse species, particularly in the areas not covered by UVC due to time and depth constraints. This methodology would considerably increase the spatial coverage and replication level of fish monitoring surveys.     

The effect of correlations on the population dynamics of lymphocytes

Recent studies of the population dynamics of a system of lymphocytes in an in vitro immune response have reported strong correlations in cell division times, both between parents and their progeny, and between those of sibling cells. The data also show a high level of correlation in the ultimate number of divisions achieved by cells within the same clone. Such correlations are often ignored in mathematical models of cell dynamics as they violate a standard assumption in the theory of branching processes, that of the statistical independence of cells. In this article we present a model in which these correlations can be incorporated, and have used this model to study the effect of these correlations on the population dynamics of a system of cells. We found that correlation in the division times between parents and their progeny can alter the mean population size of clones within the system, while all of the correlations can affect the variance in the sizes of different clones. The model was then applied to experimental data obtained from time-lapse video microscopy of a system of CpG stimulated B lymphocytes and it was found that inclusion of the correct correlation structure is necessary to accurately reproduce the observed population dynamics. We conclude that correlations in the dynamics of cells within an ensemble will affect the population dynamics of the system, and the effects will become more pronounced as the number of divisions increases.     

Scale-dependent relationships between native richness, resource stability and exotic cover in dock fouling communities of Washington, USA

Aim In terrestrial plant communities, the relationship between native species diversity and exotic success is typically scale‐dependent. It is often proposed that within local neighbourhoods, high native diversity limits resources, thereby inhibiting exotic success. However, environmental variation that manifests over space or time can create positive correlations between native diversity and exotic success at larger scales. In marine habitats, there have been few multi‐scale surveys of this pattern, so it is unclear how diversity, resource limitation and the environment influence the success of exotic species in these systems. Location Washington, USA. Methods I analysed nested spatial and temporal surveys of fouling communities, which are assemblages of sessile marine invertebrates, to test whether the relationships between native richness, resource availability and exotic cover supported the diversity‐stability and diversity‐resistance theories, to test whether these relationships changed with spatio‐temporal scale, and to explore the temperature preferences of native and exotic fouling species. Results Survey data failed to support diversity‐stability theory: space availability actually increased with native richness at the local neighbourhood scale, and neither space availability nor variability decreased with native richness across larger spatio‐temporal scales. I did find support for diversity‐resistance theory, as richness negatively correlated with exotic cover in local neighbourhoods. Unexpectedly, this negative correlation disappeared at intermediate scales, but emerged again at the regional scale. This scale‐dependent pattern could be partially explained by contrasting water temperature preferences of native and exotic species. Main conclusions Within local neighbourhoods, native diversity may inhibit exotic abundance, but the mechanism is unlikely related to resource limitation. At the largest scale, correlations suggest that native richness is higher in cooler environments, whereas exotic richness is higher in warmer environments. This large‐scale pattern contrasts with the typical plant community pattern, and has important implications for coastal management in the face of global climate change.     

Scale of population synchrony confirms macroecological estimates of minimum viable range size

Global ecosystems are facing a deepening biodiversity crisis, necessitating robust approaches to quantifying species extinction risk. The lower limit of the macroecological relationship between species range and body size has long been hypothesized as an estimate of the relationship between the minimum viable range size (MVRS) needed for species persistence and the organismal traits that affect space and resource requirements. Here, we perform the first explicit test of this assumption by confronting the MVRS predicted by the range-body size relationship with an independent estimate based on the scale of synchrony in abundance among spatially separated populations of riverine fish. We provide clear evidence of a positive relationship between the scale of synchrony and species body size, and strong support for the MVRS set by the lower limit of the range-body size macroecological relationship. This MVRS may help prioritize first evaluations for unassessed or data-deficient taxa in global conservation assessments.     

Occupancy-abundance relationships and sampling scales

The area of occupancy of a species and its abundance are dependent on the spatial scale at which they are measured. However, it is less obvious how the scale of sampling affects their correlation. This study investigated and modeled the effects of sampling unit size and a real extent on the interspecific occupancy-abundance relationships for a tropical tree species assemblage at a local scale and a temperate bird species assemblage at a regional scale. The results showed that both sampling unit size and study extent had profound quantitative effects on the occupancy-abundance relationship, although it remained positive. Several properties of the occupancy-abundance relationship can result from the effects of scale: 1) the linearity of the relationship decreases with the increase of sampling unit size; 2) for a given abundance, the area of occupancy increases with sampling unit size; and 3) variation in the area of occupancy increases with the increase of both sampling unit size and extent, and if the extent is large enough may be sufficient that no occupancy-abundance relationship is observed. Although the occupancy-abundance relationship can be satisfactorily modeled, the parameters depend on the scale used. This suggests that a model derived from one scale cannot be applied to another. In other words, to estimate the rarity or commonness of species using such a model, the estimation must be strictly done using the same sampling scale for all the species.     

Community analysis of Belarusian lakes: relationship of species diversity to morphology, hydrology and land use

In the glacial lake district of northern Belarus, limnologistscollected extensive biological, chemical and physical data on550 lakes (51% of all Belarusian glacial lakes). This largedata set provided a unique opportunity to examine subtle relationshipswith great statistical power. Our purpose was to use multivariateand correlation analyses to explore relationships of speciesrichness with morphological and hydrological parameters. A multivariateanalysis of the environmental data suggests that the Belarusianlakes can be separated along gradients of size, hydraulic residencetime and watershed development (land use). In most instances,species richness for major planktonic and benthic groups wascorrelated significantly with lake size and land use. Speciesrichness values were correlated less with watershed size orhydraulic residence time. In each community, there was a groupof species characterized by higher correlations with principalcomponent analysis (PCA) axes. These groups are as follows:for phytoplankton—diatoms, for zooplankton—rotifers,and for zoobenthos—molluscs. For lakes both in pristineand developed watersheds, we found small but significant negativespecies–area correlations for littoral crustaceans. Asurvey of the relevant literature shows scale dependence forthe correlation between species richness and lake size. Forpelagic crustaceans, the species–area correlation wassignificant (and positive) for lakes with developed watershedsbut not for pristine watersheds.     

Environmental DNA quantification in a spatial and temporal context: a case study examining the removal of brook trout from a high alpine basin

Analysis of aquatic environmental DNA (eDNA) is a promising tool to determine species distribution, abundance, and biomass. Understanding how the amount of eDNA collected is affected by spatial and temporal processes needs to become better understood before eDNA quantification can be used in species management. In this study, we analyzed how the amount of eDNA changed across space and time in a high mountain basin where nonnative fish were being removed. We sampled from restoration (sites with fish removal activities; n?=?6) and control sites (sites with no fish removal activities where fish were present; n?=?3) and found the number and biomass of fish removed were related to the quantities of DNA collected and not related to site position within the drainage. Our results indicate that the amount of eDNA collected in an open system can provide an index of population size despite inherent complications of analyzing a spatially connected and temporally dynamic watershed. However, there are complications when applying these methods in species management: (1) small increases in eDNA density corresponded to large increases in trout density; (2) eDNA and traditional field techniques disproportionately target certain life stages, complicating comparisons between techniques; and (3) eDNA index values may need to be calibrated when sampling different species, life stages, environments, and habitats. We call for further research before this process can be used in a management context.     

Constancy of the G matrix in ecological time

The constancy of the genetic variance-covariance matrix (G matrix) across environments and populations has been discussed and tested empirically over the years but no consensus has so far been reached. In this paper, I present a model in which morphological traits develop hierarchically, and individuals differ in their resource allocation and acquisition patterns. If the variance in resource acquisition is many times larger than the variance in resource allocation then strong genetic correlations are expected, and with almost isometric relations among traits. As the variation in resource acquisition decreases below a certain threshold, the correlations decrease overall and the relations among traits become a function of the allocation patterns, and in particular reflecting the basal division of allocation. A strong bottleneck can break a pattern of strong genetic correlation, but this effect diminishes rapidly with increasing bottleneck size. This model helps to understand why some populations change their genetic correlations in different environments, whereas others do not, since the key factor is the relation between the variances in resource acquisition and allocation. If a change in environment does not lead to a change in this ratio, no change can be expected, whereas if the ratio is changed substantially then major changes can be expected. This model can also help to understand the constancy of morphological patterns within larger taxa as a function of constancy in resource acquisition patterns over time and environments. When this pattern breaks, for example on islands, larger changes can be expected.     

Responses of global plant diversity capacity to changes in carbon dioxide concentration and climate

We model plant species diversity globally by country to show that future plant diversity capacity has a strong dependence on changing climate and carbon dioxide concentration. CO2 increase, through its impact on net primary production and warming is predicted to increase regional diversity capacity, while warming with constant CO2 leads to decreases in diversity capacity. Increased CO2 concentrations are unlikely to counter projected extinctions of endemic species, shown in earlier studies to be more strongly dependent on changing land use patterns than climate per se. Model predictions were tested against (1) contemporary observations of tree species diversity in different biomes, (2) an independent global map of contemporary species diversity and (3) time sequences of plant naturalisation for different locations. Good agreements between model, observations and naturalisation patterns support the suggestion that future diversity capacity increases are likely to be filled from a 'cosmopolitan weed pool' for which migration appears to be an insignificant barrier.     

Genetic and community similarities are correlated in endemic-rich springs of the northern Chihuahuan Desert

Aim Species diversity and genetic diversity within a taxon are intrinsic parts of global biodiversity. These two levels of biodiversity can show strong correlation due to a variety of reasons (i.e. parallel processes affecting both communities and populations, genotypes of a numerically or functionally dominant species affecting community composition, a species assemblage selecting for a particular genotype by affecting its selection regime). We examined correlations between species and genetic biodiversity in four isolated endemic‐rich spring systems in a hot desert and their potential link to environmental variables and physical isolation. Location Chihuahuan Desert spring systems in the Pecos River basin of New Mexico and Texas, USA. Methods We compared species richness of fish and benthic macroinvertebrate communities to within‐population allelic richness of amphipods (monophyletic Gammarus spp.) and Pecos gambusia (Gambusia nobilis) using Mantel tests. We also compared pairwise community similarities with pairwise genetic identities of populations among the same groups. We tested correlations among diversity, similarity and environmental variables after controlling for the effects of spatial distances using partial Mantel tests. We partitioned genetic and species diversity into three spatial scales (i.e. individual springs, individual spring systems, the entire region) using AMOVA and partition . Results We found strong correlations between invertebrate species richness and mosquitofish allelic richness. We found even stronger correlations of amphipod and gambusia genetic identities with fish and invertebrate community similarities; these were best explained by geographic distance rather than abiotic environmental factors. Most of the taxa and communities exhibited the largest proportion of diversity at the regional level. Main conclusions Our results suggest that drift and migration are the mechanisms that best explain our observations, and although α‐diversity among genes and species may not be strongly correlated, the pattern of species and allelic complementarity among these groups seems to be concordant at the regional level.