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1.
Summary Constructed microbial mats, used for studies on the removal and transformation of metals and metalloids, are made by combining cyanobacteria inoculum with a sediment inoculum from a metal-contaminated site. These mats are a heterotrophic and autotrophic community dominated by cyanobacteria and held together by slimy secretions produced by various microbial groups. When contaminated water containing high concentrations of metals is passed over microbial mats immobilized on glass wool, there is rapid removal of the metals from the water. The mats are tolerant of high concentrations of toxic metals and metalloids, such as cadmium, lead, chromium, selenium and arsenic (up to 350 mg L–1). This tolerance may be due to a number of mechanisms at the molecular, cellular and community levels. Management of toxic metals by the mats is related to deposition of metal compounds outside the cell surfaces as well as chemical modification of the aqueous environment surrounding the mats. The location of metal deposition is determined by factors such as redox gradients, cell surface micro-environments and secretion of extra-cellular bioflocculents. Metal-binding flocculents (polyanionic polysaccharides) are produced in large quantities by the cyanobacterial component of the mat. Steep gradients of redox and oxygen exist from the surface through the laminated strata of microbes. These are produced by photosynthetic oxygen production at the surface and heterotrophic consumption in the deeper regions. Additionally, sulfur-reducing bacteria colonize the lower strata, removing and utilizing the reducing H2S, rather than water, for photosynthesis. Thus, depending on the chemical character of the microzone of the mat, the sequestered metals or metalloids can be oxidized, reduced and precipitated as sulfides or oxides. For example precipitates of red amorphous elemental selenium were identified in mats exposed to selenate (Se-VI) and insoluble precipitates of manganese, chromium, cadmium, cobalt, and lead were found in mats exposed to soluble salts of these metals. Constructed microbial mats offer several advantages for use in the bioremediation of metal-contaminated sites. These include low cost, durability, ability to function in both fresh and salt water, tolerance to high concentrations of metals and metalloids and the unique capacity of mats to form associations with new microbial species. Thus one or several desired microbial species might be integrated into mats in order to design the community for specific bioremediation applications.  相似文献   

2.
Abstract The vertical zonation of light, O2, H2S, pH, and sulfur bacteria was studied in two benthic cyanobacterial mats from hypersaline ponds at Guerrero Negro, baja California, Mexico. The physical-chemical gradients were analyzed in the upper few mm at ≥ 100 μm spatial resolution by microelectrodes and by a fiber optic microprobe. In mats, where oxygen produced by photosynthesis diffused far below the depth of the photic zone, colorless sulfur bacteria ( Beggiatoa sp.) were the dominant sulfide oxidizing organisms. In a mat, where the O2–H2S interface was close to the photic zone, but yet received no significant visible light, purple sulfur bacteria ( Chromatium sp.) were the dominant sulfide oxidizers. Analysis of the spectral light distribution heare showed that the penetration of only 1% of the incident near-IR light (800–900 nm) into the sulfide zone was sufficient for the development of Chromatium in a narrow band of 300 μm thickness. The balance betweem O2 and light penetration down into the sulfide zone thus deterined in mcro-scale which type of sulfur bacteria becamed dominant.  相似文献   

3.
N.A. SORKHOH, R.H. AL-HASAN, M. KHANAFER AND S.S. RADWAN. 1995. A unique natural microbial cocktail with promising potential for remediating oil-polluted desert in the Gulf region is reported. Oil-degrading micro-organisms immobilized within dense cyanobacterial mats on oily coasts of the Arabian Gulf were successfully established in oil-contaminated sand. Those micro-organisms biodegraded 50% of the oil within 10–20 weeks. Nocardioforms belonging to the genus Rhodcoccus predominated in the first few weeks, but after 22 weeks Pseudomonas spp. increased, sharing Rhodococcus in the predominance. Other oil-utilizing bacterial genera included Bacillus and Arthrobacter. Filamentous actinomycetes belonging to the genera Streptomyces and probably Thermoactinomyces , as well as fungi belonging mainly to Aspergillus and Penicillium increased in the contaminated sand during the experiment but declined later. Representative strains grew on spectra of the tested n -alkanes with chain lengths between C10 and C40, as sole sources of carbon and energy.  相似文献   

4.
Abstract: Four microbial mat-forming, non-axenic, strains of the non-heterocystous, filamentous, cyanobacterial genus Microcoleus were maintained in culture and examined for the ability to fix atmospheric nitrogen (N2). Each was tested for nitrogenase activity using the acetylene reduction assay (ARA) and for the presence of the dinitrogenase reductase gene ( nifH ), an essential gene for N2 fixation, using the polymerase chain reaction (PCR). The Microcoleus spp. cultures were incapable of growth without an exogenous nitrogen source and never exhibited nitrogenase activity. Attempts to amplify a 360-bp segment of the nifH gene using DNA purified from the cyanobacterial cultures did not produce any cyanobacteria-specific nifH sequences. However, several non-cyanobacterial homologous nifH sequences were obtained. Phylogenetic analysis showed these sequences to be most similar to sequences from heterotrophic bacteria isolated from a marine microbial mat in Tomales Bay (California, USA), and bulk DNA extracted from a cryptobiotic soil crust in Moab (Utah, USA). Microcoleus spp. dominated the biomass of both systems. Cyanobacteria-specific 16S rDNA sequences obtained from the cultured cyanobacterial strains demonstrate that the lack of cyanobacteria-specific nifH sequences was not due to inefficiency of extracting Microcoleus DNA. Hence, both the growth and genetic data indicate that, contrary to earlier reports, Microcoleus spp. appear incapable of fixing N2 because they lack at least one of the requisite genes for this process. Furthermore, our study suggests epiphytic N2-fixing bacteria form a diazotrophic consortium with these Microcoleus spp. and are likely key sources of fixed N2 generated within soil crusts and marine microbial mats.  相似文献   

5.
SUMMARY. 1. Several dozen summer meltwater streams are located in the McMurdo Sound region (c. 78°S 165°E) of southern Victoria Land. They are characterized by a highly variable flow regime at diel, seasonal and annual times caleis; wide fluctuations in temperature and nutrient content; and a very simple epilithic community of cyanophytes ( Nostoc spp., Oscillatoriaceae), bacteria, fungi and microherbivores.
2. The epilithon survives the dark Antarctic winter as dry, frozen mats which provide a large inoculum for growth the following summer. This overwintering assemblage retains a high metabolic capacity and responds rapidly to rehydration.
3. In a series of artificial substrate experiments, biomass accumulation rates were generally less than 0.1 In units d−1. Colonization and growth on the substrates was inversely related to the suspended sediment load of the stream. There was also a visual correspondence between per cent algal cover of the natural streambed and the clarity of the streamwater. Sloughing losses may limit community biomass, particularly in the turbid flowing waters.
4. During running water conditions the mature communities had very low gross photosynthetic rates per unit chlorophyll (<0,1 μg C (μg chl a .h)−1 and per unit carbon (<0,2 μg C (mg biomass C.h)−1). Respiration was generally a high percentage (up to 92%) of gross photosynthesis, which probably reflected the high population densities of microheterotrophs in the community.
5. The floristically simple epilithic mats slowly accumulate to extreme biomass levels (>20 μg chl a cm −2, <20 mg C cm−2). Production rates per unit biomass are low, probably in response to the cold temperatures of the Antarctic stream environment, and the accumulated biomass represents several seasons of growth.  相似文献   

6.
Methanogenesis in the hypersaline Solar Lake (Sinai)   总被引:2,自引:0,他引:2  
Abstract Enrichment studies on microbial mat sediments (potential stromatolites) from the hypersaline Solar Lake (Sinai) indicated high numbers of methanogenic bacteria (up to 105 ml−1 sediment) in spite of the high sulfate reduction rate, sulfate concentration and salinity. Among H2/CO2, acetate and monomethylamine, the methylated amine was the preferred substrate. The predominant species enriched was a Methanosarcina sp. The findings indicate that methanogenic bacteria play an important role in hypersaline sulfate-enriched anoxic sediments and stromatolithic microbial mats.  相似文献   

7.
This work studies the diversity of cyanobacterial and algal-bacterial communities of saline water bodies in the Crimean Peninsula and Altai Region. Plant-bacterial communities are described for the first time. The dependence of the production and destruction on the season and salinity of the water body is shown. The development of planktonic cyanobacteria is related to the presence of zooplankton, the development of which is controlled by hydrogen sulfide. The high hydrogen sulfide tolerance of benthic cyanobacteria secures the integrity of cyanobacterial communities. Observations in nature and laboratory modeling show that the formation of mineral layers is restricted to conditions of supersaturation with mineral components. Carbonate precipitation can take place in cyanobacterial communities under conditions of mixing sea water enriched with Ca and Mg with continental water enriched with sodium carbonate. Cyanobacteria are able to form and transform various Ca-Mg-carbonates. Dolomite formation is a derived process that occurs in cyanobacterial mats in the presence of sulfate-reducing bacteria. Carbonatization of cyanobacterial cells is considered using the example of the unicellular halophilic-alkaliphilic cyanobacterium Euhalothece sp. The accomplished study is of certain interest for interpretation of geological and paleontological data in the context of the supposed analogy between cyanobacterial mats and ancient stromatolites.  相似文献   

8.
This paper describes the potential of oil-utilizing bacteria associated with live fish from the Arabian Gulf for hydrocarbon attenuation in seawater polluted with oil. Maintaining local live fish (grey mullet and tilapia) in seawater artificially polluted with crude oil or individual hydrocarbons for 3 w led to dramatic attenuation of those compounds. The same result was obtained when instead of live fish, the bacterial consortia scraped off from the fish surfaces were used. Almost similar hydrocarbon attenuation results were obtained irrespective of whether the system was fertilized with NH4NO3 or not. Parallel counting of oil-utilizing bacteria associated with fish on a nitrogen-containing and a nitrogen free-medium gave almost similar numbers, indicating that most of the hydrocarbon-utilizing bacteria could fix atmospheric nitrogen. The predominant hydrocarbon-utilizing bacteria isolated from fish grew well in nitrogen-free medium and gave positive nitrogenase test as revealed by their potential for acetylene reduction to ethylene. Molecular fingerprinting showed that crude oil-polluted seawater samples incubated for 3 w contained two new 16S rDNA bands probably corresponding to hydrocarbon-utilizing bacteria. It was concluded that fish individuals accommodate rich bacterial consortia with the combined potential for hydrocarbon-utilization and nitrogen-fixation, which makes them efficient in cleaning hydrocarbon pollutants in water without need for nitrogen fertilization.  相似文献   

9.
Total bacterial numbers at the most highly contaminated sites on lamb carcases (in the crutch region and adjacent to the abdominal incision) were significantly reduced to log10 3.3/cm2 when spray washed with unchlorinated water at 80°C and to log10 2.8 when water at 80°C containing 450 μg/ml chlorine was used, whereas numbers on carcases which were cloth cleaned or spray washed with water at 10°C remained at approximately log10 4.0. During refrigerated storage, however, carcases treated by all methods developed similar numbers of bacteria and had the same storage life, evidently because spray washing did not affect numbers of bacteria on the diaphragm. Although initial numbers of bacteria at this site were low (log10 2.9), their numbers, and also the amount of slime, increased more rapidly there than at other sites. In addition, spray washing did not significantly affect numbers of Pseudomonas spp or Brochothrix thermosphacta , which accounted for <1% of the microflora after slaughter at each site but whose numbers were between log10 6.1 and 7.5/cm2 when carcases were rejected as spoiled.  相似文献   

10.
The effects of salinity fluctuation on bacterial diversity, rates of gross photosynthesis (GP) and oxygen consumption in the light (OCL) and in the dark (OCD) were investigated in three submerged cyanobacterial mats from a transect on an intertidal flat. The transect ran 1 km inland from the low water mark along an increasingly extreme habitat with respect to salinity. The response of GP, OCL and OCD in each sample to various salinities (65 per thousand, 100 per thousand, 150 per thousand and 200 per thousand) were compared. The obtained sequences and the number of unique operational taxonomic units showed clear differences in the mats' bacterial composition. While cyanobacteria decreased from the lower to the upper tidal mat, other bacterial groups such as Chloroflexus and Cytophaga/Flavobacteria/Bacteriodetes showed an opposite pattern with the highest dominance in the middle and upper tidal mats respectively. Gross photosynthesis and OCL at the ambient salinities of the mats decreased from the lower to the upper tidal zone. All mats, regardless of their tidal location, exhibited a decrease in areal GP, OCL and OCD rates at salinities > 100 per thousand. The extent of inhibition of these processes at higher salinities suggests an increase in salt adaptation of the mats microorganisms with distance from the low water line. We conclude that the resilience of microbial mats towards different salinity regimes on intertidal flats is accompanied by adjustment of the diversity and function of their microbial communities.  相似文献   

11.
本文采用单因素和正交试验设计,对链霉菌 Streptomyces canus sp. FIM-0916产安福霉素的发酵培养基配方及发酵条件进行了优化。优化后的最佳培养基配方为:蔗糖1.5%,黄豆粉1.0%,组氨酸0.1%,KNO3 0.1%, CaCO3 0.1%。最佳发酵条件为:种子菌龄54 h,装液量120 mL/500 mL,接种量2%,发酵温度28℃,摇床转速250 r/min;最佳发酵时间为5 d。在该优化条件下,安福霉素的发酵效价比对照提高248%,为安福霉素的后续开发奠定了基础。  相似文献   

12.
The effect of the growth of temperature, pH, carbon source, nitrogen supplementation and inoculum size were examined in shake-flask-scale studies to determine the optimum conditions for β-glucosidases production by Sporotrichum (Chrysosporium) thermophile. Wheat bran and sugar-beet pulp were selected as the best carbon sources and (NH4)2SO4, NH4Cl and KNO3 as the best nitrogen supplementation. Ten liter fermentations were carried out to study the kinetics of product formation. It was found that S. thermophile is able to produce high thermostable extracellular cellobiase and aryl-β-glucosidase. Very high aryl-β-glucosidase (PNPG) activities in the range from 30 to 40 U ml−1 and cellobiase activities of 2,45 U ml−1 in the 3-day batch fermentations were obtained. The Km for aryl-β-glucosidase and its thermal properties were also estimated.  相似文献   

13.
Modern microbial mats are widely recognized as useful analogs for the study of biogeochemical processes relevant to paleoenvironmental reconstruction in the Precambrian. We combined microscopic observations and investigations of biomarker composition to investigate community structure and function in the upper layers of a thick phototrophic microbial mat system from a hypersaline lake on Kiritimati (Christmas Island) in the Northern Line Islands, Republic of Kiribati. In particular, an exploratory incubation experiment with 13C-labeled bicarbonate was conducted to pinpoint biomarkers from organisms actively fixing carbon. A high relative abundance of the cyanobacterial taxa Aphanocapsa and Aphanothece was revealed by microscopic observation, and cyanobacterial fatty acids and hydrocarbons showed 13C-uptake in the labeling experiment. Microscopic observations also revealed purple sulfur bacteria (PSB) in the deeper layers. A cyclic C19:0 fatty acid and farnesol were attributed to this group that was also actively fixing carbon. Background isotopic values indicate Calvin–Benson cycle-based autotrophy for cyc C19:0 and farnesol-producing PSBs. Biomarkers from sulfate-reducing bacteria (SRB) in the top layer of the mat and their 13C-uptake patterns indicated a close coupling between SRBs and cyanobacteria. Archaeol, possibly from methanogens, was detected in all layers and was especially abundant near the surface where it contained substantial amounts of 13C-label. Intact glycosidic tetraether lipids detected in the deepest layer indicated other archaea. Large amounts of ornithine and betaine bearing intact polar lipids could be an indicator of a phosphate-limited ecosystem, where organisms that are able to substitute these for phospholipids may have a competitive advantage.  相似文献   

14.
We studied the interaction between phototrophic and chemolithoautotrophic sulphide-oxidizing microorganisms in natural microbial mats forming in sulphidic streams. The structure of these mats varied between two end-members: one characterized by a layer dominated by large sulphur-oxidizing bacteria (SOB; mostly Beggiatoa-like) on top of a cyanobacterial layer (B/C mats) and the other with an inverted structure (C/B mats). C/B mats formed where the availability of oxygen from the water column was limited (<5 μm). Aerobic chemolithotrophic activity of the SOB depended entirely on oxygen produced locally by cyanobacteria during high light conditions. In contrast, B/C mats formed at locations where oxygen in the water column was comparatively abundant (>45 μM) and continuously present. Here SOB were independent of the photosynthetic activity of cyanobacteria and outcompeted the cyanobacteria in the uppermost layer of the mat where energy sources for both functional groups were concentrated. Outcompetition of photosynthetic microbes in the presence of light was facilitated by the decoupling of aerobic chemolithotrophy and oxygenic phototrophy. Remarkably, the B/C mats conserved much less energy than the C/B mats, although similar amounts of light and chemical energy were available. Thus ecosystems do not necessarily develop towards optimal energy usage. Our data suggest that, when two independent sources of energy are available, the structure and activity of microbial communities is primarily determined by the continuous rather than the intermittent energy source, even if the time-integrated energy flux of the intermittent energy source is greater.  相似文献   

15.
Epilithic bacteria in an acid and a calcareous headstream   总被引:3,自引:0,他引:3  
SUMMARY. 1. Environmental variables and epilithic bacteria on small stones were monitored during summer and winter in Burbage Brook and the River Lathkill, two headstreams in the Derbyshire Peak District.
2. Burbage Brook was usually near-neutral in summer, but acid in winter; the River Lathkill was circumneutral throughout the year.
3. In summer, epilithic bacteria showed few between-stream differences. In winter, however, total bacteria, colony-forming units, per cent chromogenic colony-forming units, per cent viable bacteria, Vmax for glucose mineralization and Vmax/bacterium were all significantly less in the acid Burbage Brook.
4. Inhibition of epilithic bacteria in Burbage Brook was also observed when pH fell to a low level during a summer spate.
5. Multiple-regression analysis confirmed that epilithic bacteria were less successful at low pH but also suggested that pH was not the only environmental variable to influence epilithic bacteria. Especially notable were positive relationships with density of epilithic chlorophyll a and temperature in Burbage Brook and with chlorophyll a in the River Lathkill.  相似文献   

16.
The use of a granular inoculum prevented acidification during the anaerobic batch biodegradation of a kitchen waste for waste/inoculum ratios in the range of 0.5–2.3 g VS/g VS, when the alkalinity/COD ratio was 37 mg NaHCO3/g COD. In similar experiments but using a suspended sludge with a significantly lower activity, the methane production rates and the biodegradability were significantly lower and the pH decreased below 5.5 at the waste/inoculum ratio of 2.3 g VS/g VS. When the added alkalinity was decreased to 2 mg NaHCO3/g COD, the ratio waste/inoculum was clearly more important than the inoculum activity, since, irrespective of the sludge used, acidification occurred at waste/inoculum ratios higher than 0.5 g VS/g VS. The advantage of using granular sludge was further investigated in order to define reasonable condition of waste/inoculum ratio and added alkalinity that could be applied in practice. For a waste/inoculum ratio of 1.35, there were no significant differences between the results obtained for the biodegradability and maximum methane production rate (MMPR), when the alkalinity decreased from 44 to 22 mg NaHCO3/g COD.  相似文献   

17.
Extremely halophilic, methylotrophic, anaerobic bacteria   总被引:3,自引:0,他引:3  
Abstract Extremely halophilic methanogens and a rodshape homo-acetogen were isolated from cyanobacterial mats of Sivash, Crimea. Trimethylamine served as a single source of energy for both groups. Methanogenic strains obtained constitute a continuum of forms, from moderately halophilic to those living at salt saturation. A new homo-acetogen, Acetohalobium arabaticum growing in the salinity range of 10–25% produced acetate, mono-, di- and trimethylamines from betaine. A limited number of substrates including formate, H2+ CO2, CO, lactate, pyruvate and hystidine was utilized. A trophic chain is discussed for methanogenesis in hypersaline environments.  相似文献   

18.
Inferences about the evidence of life recorded in organic compounds within the Earth's ancient rocks have depended on 13C contents low enough to be characteristic of biological debris produced by the well-known CO2 fixation pathway, the Calvin cycle. 'Atypically' high values have been attributed to isotopic alteration of sedimentary organic carbon by thermal metamorphism. We examined the possibility that organic carbon characterized by a relatively high 13C content could have arisen biologically from recently discovered autotrophic pathways. We focused on the green non-sulphur bacterium Chloroflexus aurantiacus that uses the 3-hydroxypropionate pathway for inorganic carbon fixation and is geologically significant as it forms modern mat communities analogous to stromatolites. Organic matter in mats constructed by Chloroflexus spp. alone had relatively high 13C contents (−14.9‰) and lipids diagnostic of Chloroflexus that were also isotopically heavy (−8.9‰ to −18.5‰). Organic matter in mats constructed by Chloroflexus in conjunction with cyanobacteria had a more typical Calvin cycle signature (−23.5‰). However, lipids diagnostic of Chloroflexus were isotopically enriched (−15.1‰ to −24.1‰) relative to lipids typical of cyanobacteria (−33.9‰ to −36.3‰). This suggests that, in mats formed by both cyanobacteria and Chloroflexus , autotrophy must have a greater effect on Chloroflexus carbon metabolism than the photoheterotrophic consumption of cyanobacterial photosynthate. Chloroflexus cell components were also selectively preserved. Hence, Chloroflexus autotrophy and selective preservation of its products constitute one purely biological mechanism by which isotopically heavy organic carbon could have been introduced into important Precambrian geological features.  相似文献   

19.
This study describes a bench‐scale attempt to bioremediate Kuwaiti, oily water and soil samples through bioaugmentation with coastal microbial mats rich in hydrocarbonoclastic bacterioflora. Seawater and desert soil samples were artificially polluted with 1% weathered oil, and bioaugmented with microbial mat suspensions. Oil removal and microbial community dynamics were monitored. In batch cultures, oil removal was more effective in soil than in seawater. Hydrocarbonoclastic bacteria associated with mat samples colonized soil more readily than seawater. The predominant oil degrading bacterium in seawater batches was the autochthonous seawater species Marinobacter hydrocarbonoclasticus. The main oil degraders in the inoculated soil samples, on the other hand, were a mixture of the autochthonous mat and desert soil bacteria; Xanthobacter tagetidis, Pseudomonas geniculata, Olivibacter ginsengisoli and others. More bacterial diversity prevailed in seawater during continuous than batch bioremediation. Out of seven hydrocarbonoclastic bacterial species isolated from those cultures, only one, Mycobacterium chlorophenolicum, was of mat origin. This result too confirms that most of the autochthonous mat bacteria failed to colonize seawater. Also culture‐independent analysis of seawater from continuous cultures revealed high‐bacterial diversity. Many of the bacteria belonged to the Alphaproteobacteria, Flavobacteria and Gammaproteobacteria, and were hydrocarbonoclastic. Optimal biostimulation practices for continuous culture bioremediation of seawater via mat bioaugmentation were adding the highest possible oil concentration as one lot in the beginning of bioremediation, addition of vitamins, and slowing down the seawater flow rate.  相似文献   

20.
Pieces of fresh nervous tissue 4-5 mm thick are put into the following solution: HgCl2, 1 gm; K2Cr2O7, 1 gm; K2CrO4, 0.8 gm; K2WO4 (or Na2WO4), 0.5 gm; distilled water 100 ml. They are kept undisturbed in the dark at room temperature for 20-30 days, then transferred to the following alkaline solution: LiOH (or NaOH), 1 gm; KNO3, 15 gm; distilled water, 100 ml. After 12-24 hr in this solution they are washed for 12-24 hr in several changes of distilled water. (If sodium hydroxide was used, 0.5 ml of acetic acid should be added per 100 ml of wash water.) Embedding in celloidin follows dehydration. Sections are dehydrated in 3 parts of absolute alcohol and 1 part of chloroform, cleared in iodobenzene and mounted with a cover slip using a mounting medium with a refractive index around 1.61. The use of tungstate improves the general results and allows especially successful impregnations in very young animals, when the usual technic fails.  相似文献   

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