Species concept and speciation

Defining and recognizing a species has been a controversial issue for a long time. To determine the variation and the limitation between species, many concepts have been proposed. When a taxonomist study a particular taxa, he/she must adopted a species concept and provide a species limitation to define this taxa. In this paper some of species concepts are discussed starting from the typological species concepts to the phylogenetic concept. Positive and negative aspects of these concepts are represented in addition to their application.     

Patterns of bryophyte diversity and rarity at a regional scale

Information on bryophyte diversity and rarity were combined withinformation on soil conditions and land use for Walloon Brabant (centralBelgium, 1091 km²) in order to investigate whichlandscape features sustain the most rare and diverse species assemblages.Presence–absence of 325 bryophyte species was recorded in 87 grid-squaresof 4 × 4 km. Species diversity was significantly correlatedwith forest cover (r = 0.71, P <0.001), sandy soils (r = 0.61, P <0.001), loamy soils, (r = –0.68,P < 0.001), and agricultural fields(r = –0.49, P < 0.001). Themost diverse grid-squares possessed up to 182 species and were characterized byat least 10% forest cover and the presence of unique micro-habitats.Grid-squares with forest cover reaching at least 10% but lacking uniquemicro-habitats contained between 90 and 130 species. Below 10% forest cover,diversity ranged between 55 and 110 species per grid-square. However, even theleast diverse cultivated areas included a significant amount of the regionallyrare species. A number of the latter are characteristic in other areas forspecific primary habitats lacking in Walloon Brabant but display an unexpectedability to disperse throughout hostile areas and colonize secondary habitats.The tendency of such species to occur in man-made habitats decreased our abilityto predict species richness and rarity from landscape features and soilconditions.     

Diversity and abundance of leafhopper species (Homoptera: Cicadellidae) among red maple clones

A survey was conducted in the 2001 growing season to examine the leafhopper diversity and abundance among trees of 17 red maple (Acer rubrum) clones. Yellow sticky traps were used to qualify and quantify the number of aerial leafhoppers from 1 May 2001 until 4 September 2001. A total of 45 species from eight different leafhopper subfamilies, for a total of 6055 individuals, were considered in this study. The mean number of leafhoppers collected, mean species richness, diversity and evenness were significantly lower on traps of trees for October Glory than for the other clones. Yet, none of the leafhopper species dominated the weekly samples. Species similarity among clones ranged from 56 to 90%. No two clones had complete similarity. Franksred and trees of a controlled cross between October Glory × Autumn Flame shared the highest degree of species similarity, while clones from PA, USA and RI, USA were the least similar. The development of new clones did not create new pest problems, but suppressed populations of damaging pests, and maintained the diversity of low abundance species.     

Species richness, diversity and biomass production of desert annuals in an ungrazed Rhanterium epapposum community over three growth seasons in Kuwait

Two blocks, each consisting of twelve 0.25 m²permanent plots, were established in a community dominated by desert annuals inan area of Kuwait protected from grazing, and community attributes wereinvestigated over three growth seasons. A linear relationship was found betweenestimated desert annual cover and biomass production. Species frequency wasassessed by the number of 100 cm² subplots occupied byaspecies in a block (block incidence). Over the three seasons,vegetation features varied considerably. The first season (spring 1997) wascharacterised by very sparse vegetation cover, low vegetation block incidence(sum of individual block incidences of each species present in a block) and lowspecies richness. The second season (spring 1998) had high vegetation cover,relatively low vegetation block incidence, but high species richness. In thethird season (spring 2000), vegetation cover was very sparse (as in 1997), butboth blocks had the highest vegetation block incidence of the three years andspecies richness was moderately high, although individual plants were verysmall. The growth period was much shorter in the very productive andspecies-rich 1998 season than in 2000. Fluctuations in biomass and speciesincidence coincided with pronounced variation in key meteorological variables,in particular the onset of the first rains, the amount of rainfall during thegrowing season and its temporal distribution. Species composition, however,appears mainly to be determined by the amount and possibly the timing of thefirst rainfalls of the season to trigger germination. There was little evidenceto suggest that particularly favourable or unfavourable microsites existed inplots for more than one vegetation period, either for individual species or fordiversity in general. Despite substantial between-season fluctuations inincidence, the relative abundances of the more frequent species to each otherremained broadly similar over the three seasons, with Plantagoboissieri being the predominant species and accounting for thelargest proportion of biomass.     

The species-area relation III. A third model for a delimited community

Summary A mathematical model of the species-area relation is described for a group of limited species. This model is a modification of that proposed earlier (Kobayashi, 1975), being assumed that the limited species are expected to occur in a habitat under consideration. The model equation gives a sigmoid species-log area curve implying that few rare species are found in a group of species. The good agreement between observation and this model is exemplified with the data of plant and arthropod communities. The implication of parameters involved are examined in connection with those of the preceding model, and the underlying ecology of the model is discussed. Contribution from the Laboratory of Applied Zoology, Yamagata University, No. 83.     

论物种的客观真实性

关于物种的概念和本质的争论由来已久。大多数学者认为种是自然界客观存在的真实单位,是形态上和生殖上间断的群体体系,与种内连续的群体体系——宗,有着本质的区别。少数学者则认为种是主观意识的产物,是为了分类的目的而任意确定的人为的分类阶元,与宗只有程度的不同而无本质的区别;只有个体才是客观真实的单位。以形态标准为主的分类学种概念和以生殖隔离为标准的生物学种概念只能说代表了自然界有机体类群不连续性的两个不尽相符,但部分一致的侧面,而不能说就是客观物种的反映。自然界的生命有机体有两重性。它们既不是一群乱七八糟的乌合之众,也不是秩然不紊的鳞次栉比,而是以群体的组织形式适应于各自分布区内的生态位,在表型和基因型的变异式样上具有一定规律的遗传多样性。物种的客观本质也有两重性。物种作为有机体组合的单位既存在又不存在。说物种客观存在是因为按形态或生殖的不连续性标准划分的“种”在自然界具有一定的普遍性;说物种并非客观存在是因为至今还没有一个能把所有的生命有机体都划分成统一的生物学单位的不连续性标准。     

The species in primatology

Biologists of the late eighteenth and early nineteenth centuries all bandied about the term “species,” but very rarely actually said what they meant by it. Often, however, one can get inside their thinking by piecing together some of their remarks. One of the most nearly explicit‐appropriately, for the man who wrote a book called The Origin of Species – was Charles Darwin 1 : “Practically, when a naturalist can unite two forms together by others having intermediate characters, he treats the one as a variety of the other… He later translated this into evolutionary terms: “Hereafter, we shall be compelled to acknowledge that the only distinction between species and well‐marked varieties is, that the latter are known, or believed, to be connected at the present day by intermediate gradations, whereas species were formerly thus connected”^1:484‐5     

Changes in plant species diversity along a chronosequence of vegetation restoration in the humid evergreen broad-leaved forest in the Rainy Zone of West China

Plant species diversity has been recognized as one of the vital attributes for assessing vegetation restoration. Changes in the diversity may be related to different stages of succession. In this study, 54 sites of humid, evergreen, broad-leaved forest were selected in the Rainy Zone of West China. A chronosequence of the sites was used to study the successive patterns of the diversity in the forest that had undergone natural regeneration for 5 to 350 years and to test the hypothesis that the diversity is maximized in mid-succession. Data were collected simultaneously at different stages of succession, and four α-diversity indices (species richness, Margalef index, Shannon-Wiener index, Pielou Evenness index) and two β-diversity indices (Whittaker index, Sørensen’s index) were calculated for each stratum in each plot. A total of 394 vascular plant species were recorded. From the β-diversity indices, the forest succession may be divided into the early-successional stage (before 50 years), mid-successional stage (from 50 to 300 years), and late-successional stage (after 300 years). In this community, the species diversity and richness were found to be the greatest at the mid-successional stage, followed by the late- and early-successional stages. The results of regression analysis indicated that the richness and Margalef index peaked around the 175th and 165th year, respectively. Shannon-Wiener index values also appeared to follow an approximately humped pattern of succession and were maximal around the 100th year. However, the species evenness did not show any significant relationship with successional age. Our results demonstrate (1) forest restoration is a long-term process and the formation of climax forest requires at least 300 years and (2) the forest has a strong capacity for restoration. Our results also suggest Lindera limprichitii and Machilus pingii as ideal tree species for afforestation because of their wide niche.     

Microhabitat variations and seed bank-vegetation relationships in a desert wadi ecosystem

Due to extreme variability in patterns of rainfall, plant seed banks are an important component of desert habitats. Here I report on effects of standing vegetation and three different microhabitats (channel, bank and terrace) on the soil seed bank of a desert wadi ecosystem in the Eastern Desert of Egypt. A total of 450 soil samples at 45 stands were collected to represent the different wadi microhabitats. The germinable seed bank was estimated by controlled counts of seedling emergence. The floristic composition, functional properties and diversity of the soil seed bank, as well as its similarity with the standing vegetation varied among wadi microhabitats. Such variation could be attributed to differences in disturbance intensity among microhabitats (terrace < bank < channel) and variation of soil factors along the microtopographic gradient. Channel showed the highest species richness and size of soil seed bank, followed by bank and then terrace. Moreover the Shannon index of diversity of the seed bank and its similarity with standing vegetation were significantly greater in both channel and bank microhabitats than in terrace. At the level of plant functional groups, number of seeds of annuals was higher in both channel and bank than in terrace. Shrubs were more abundant in seed banks of channel compared to terrace. The size and species richness of seed bank were increased with the total plant cover, annual/perennial ratio and species richness of the standing vegetation.     

Environmental drivers of the bryophyte propagule bank and its comparison with forest-floor assemblage in Central European temperate mixed forests

Species richness, composition and abundance of the bryophyte diaspore bank of Central European temperate mixed forests were compared with the forest-floor bryophyte assemblage. The impact of environmental variables and anthropogenic disturbances, including tree species composition, stand structure, microclimate, light conditions, soil and litter properties, management history, and landscape properties, potentially influencing bryophyte diaspore bank assemblages were explored. Thirty-four, 70–100 years old mixed stands with differing tree species composition were examined in the ?rség National Park, Western Hungary. The diaspore bank was studied by soil collection and cultivation, and data were analysed by multivariate methods. Contrary to the forest-floor bryophyte assemblage, where substrate availability, tree species composition and stand structure were the most influential environmental variables, the composition and abundance of the diaspore bank was mainly affected by site conditions (microclimate, litter and soil properties). Species richness of the bryophyte diaspore bank was lower than that of the forest-floor bryophyte assemblage. Short-lived mosses (colonists, short-lived shuttles) were dominant in the diaspore bank, as opposed to the forest-floor bryophyte community, where perennial mosses dominated. In the studied forests, the importance of the bryophyte diaspore bank was relatively low in the regeneration and maintenance of the forest-floor bryophyte vegetation.     

科尔沁沙地沙漠化过程中的物种多样性

对内蒙古科尔沁地区沙漠化过程中物种多样性的变化特征进行了分析 ,依据植物种在各类型沙漠化土地的出现频率和不同沙漠化阶段各生活型植物种的组成 ,探讨了沙漠化过程中植物种绝灭和定居特点 .物种多样性指数分析表明 ,沙漠化过程是一个物种多样性衰减的过程 ,沙漠化首先导致特有种的绝灭 ,其次为稀有种和普通种 .从植物的生活型来看 ,多年生草本和灌木类植物受沙漠化影响最大 ,而 1年生草本和半灌木类植物可存活于沙漠化过程各个阶段 .在沙漠化过程中植物种的绝灭速率大于定居速率 .     

Effects of site and species characteristics on nested patterns of species composition in sedge meadows

Biotas of both geographical islands and habitat islands are often nested subsets of the biotas of successively more species-rich islands within the same system. The life history characteristics of a species may determine how that species contributes to the general pattern of species nestedness. Here, I investigate the floras of 56 sedge meadow wetlands in northern Illinois (USA) in order to characterize the degree of nestedness in these communities, determine which individual plant species contribute to the nested pattern, and investigate species characteristics that might be related to nonrandom patterns of distribution in individual plant species. The entire assemblage of species at all sedge meadows was significantly nested. Species richness and area were significantly correlated, and the nested pattern was closely related to site area, suggesting that species drop out of the assemblage in a predictable order as site area decreases. Some individual species exhibited nonrandom distributions across the sites, occurring more often in large, species-rich sites. Large sites were more likely than smaller sites to contain conservative species, i.e., those typical of pristine natural habitat, whereas nonconservative species were distributed more randomly among sites. Nested patterns of distribution of conservative species with respect to site area may result from their high probability of extinction on small sites or from a tendency for required habitats to co-occur on the same large sites. This revised version was published online in June 2006 with corrections to the Cover Date.     

Expansion of Rosa rugosa and Hippophaë rhamnoides in coastal grey dunes: Effects at different spatial scales

The study analysed the effects of shrub expansion on vegetation composition and plant species diversity in coastal grey dunes on the North Sea island Spiekeroog, comparing Rosa rugosa and Hippophaë rhamnoides. Species composition was recorded in plots of two spatial scales, 1 and 16 m², considering the full range of shrub cover from less than 10 to almost 100%. Although R. rugosa and H. rhamnoides established and spread in the same grey dune environment, the vegetation of the two shrubland types was much different. While the H. rhamnoides plots were relatively species-rich, characterised by remnant grey dune vegetation with many small, often annual, light-demanding species except in the densest shrubs, the R. rugosa plots were clearly species-poorer due to the loss of many typical grey dune species, including only few shade-tolerant taxa. The total number of species, the number of herbaceous species and of species typical for grasslands decreased with increasing cover of H. rhamnoides and R. rugosa at both spatial scales. For the number of shrubs and shrubland species, hardly any significant effects of shrub cover were observed in R. rugosa, while there were positive effects in H. rhamnoides. Both the Shannon index and evenness decreased with increasing cover of the two shrub species at both spatial scales. Here, the decline in species diversity was more improved in R. rugosa than in H. rhamnoides.     

Effects of flooding, salinity and herbivory on coastal plant communities, Louisiana, United States

Flooding and salinity stress are predicted to increase in coastal Louisiana as relative sea level rise (RSLR) continues in the Gulf of Mexico region. Although wetland plant species are adapted to these stressors, questions persist as to how marshes may respond to changed abiotic variables caused by RSLR, and how herbivory by native and non-native mammals may affect this response. The effects of altered flooding and salinity on coastal marsh communities were examined in two field experiments that simultaneously manipulated herbivore pressure. Marsh sods subjected to increased or decreased flooding (by lowering or raising sods, respectively), and increased or decreased salinity (by reciprocally transplanting sods between a brackish and fresh marsh), were monitored inside and outside mammalian herbivore exclosures for three growing seasons. Increased flooding stress reduced species numbers and biomass; alleviating flooding stress did not significantly alter species numbers while community biomass increased. Increased salinity reduced species numbers and biomass, more so if herbivores were present. Decreasing salinity had an unexpected effect: herbivores selectively consumed plants transplanted from the higher-salinity site. In plots protected from herbivory, decreased salinity had little effect on species numbers or biomass, but community composition changed. Overall, herbivore pressure further reduced species richness and biomass under conditions of increased flooding and increased salinity, supporting other findings that coastal marsh species can tolerate increasingly stressful conditions unless another factor, e.g., herbivory, is also present. Also, species dropped out of more stressful treatments much faster than they were added when stresses were alleviated, likely due to restrictions on dispersal. The rate at which plant communities will shift as a result of changed abiotic variables will determine if marshes remain viable when subjected to RSLR. Received: 8 April 1998 / Accepted: 15 June 1998     

舟山岛自然栖息地的变化及其对兽类物种绝灭影响的初步研究

舟山岛自然栖息地和物种受到人类活动的强烈干扰．占总面积５６．３％的自然栖息地已经消失,自然栖息地已破碎成许多碎片,碎片面积不断变小,碎片数量在增加．自然栖息地的质量发生了很大变化．自然栖息地的易破碎带与其地理特征有关,破碎易发生于被开垦和开发的地带．由于自然栖息地面积损失、破碎、质量下降和过度捕杀,已有５种兽绝灭,３种兽正走向绝灭,绝灭速度高于临近大陆．人口增长是舟山岛自然栖息地损失、破碎、质量下降和物种绝灭的根本原因．本文还讨论了保护自然栖息地和物种多样性的一些措施和原则．     

铜壁关自然保护区种子植物物种丰富度的海拔梯度格局——兼论物种密度的计算方法

利用对铜壁关自然保护区多次考察形成的种子植物数据库,结合通过GIS生成的区域数字高程模型(DEM)数据,分析了该区域种子植物物种丰富度及物种密度沿海拔梯度的变化特征。结果表明, 科、属、种的丰富度随海拔的升高,先增加后降低,在中海拔区域达到最大值,科、种的丰富度最大值出现在海拔1400~1800 m的范围内,属的丰富度最大值出现在1000~1400 m的海拔范围。科、属、种的密度随海拔升高先下降后上升,再下降后再上升;且最大值都出现在保护区最高海拔3000~3400 m的范围内。物种丰富度和物种密度分布格局明显受到海拔梯度的影响,海拔梯度综合了水热条件等诸多因素。铜壁关种子植物科、属、种水平上的物种丰富度的海拔分布格局符合中域效应假说;同时还对目前常用的计算物种密度的"对数模型"方法的普遍适用性提出质疑。     

Forest biodiversity gradients and the human impact in Annapurna Conservation Area, Nepal

Patterns of biodiversity, environment and human impact were studied in 57 sample plots in an 1,178 ha forest area in a rural mountain area of Nepal that is administrated by the Annapurna Conservation Area Project. Alpha-, beta- and gamma-diversity was measured or estimated for six groups of organisms: trees, shrubs, climbers, herbs, polypores and mycorrhizal fungi, and the recorded patterns were correlated with a set of environmental variables. Human impact in terms of fuelwood collection, selective cutting and grazing was found to influence species diversity patterns in all organism groups. Species richness of trees, climbers and polypores at plot level (alpha-diversity) generally responded negatively to human impact, whereas species richness of herbs and shrubs showed a positive relation. Species turnover (beta-diversity), measured as length of the DCA first axis, was significantly correlated to distance to village for all species groups. This indicates that the human impact is very important for the biodiversity patterns in the study area, and that biodiversity connected to undisturbed forest habitats are potentially threatened in the area. The results are discussed in the context of practical conservation. A proposal for future management zones addressing protection of biodiversity without limiting the local use of the forest resource is put forward.     

Radiolarian assemblages in surface sediments along longitude 175°E in the Pacific Ocean

This study of 24 surface sediment samples along longitude 175°E between latitudes 48°N and 14°S in the western Pacific Ocean documents the relationship between the modern distribution of radiolarian assemblages and present oceanographic conditions. Ninety-two species were classified into eight clusters by using R-mode cluster analysis. Q-mode cluster analysis was used to distinguish five geographical zones, which were interpreted to represent the Tropical, Southern Subtropical, Northern Subtropical, Transitional, and Subarctic climatic zones. Species richness, diversity, and equitability are highest in the Tropical and Transitional Zones. We attempted to formulate new regression equations considering ecological information on the vertical distribution of radiolarian species. Transfer functions were derived from regression analysis of radiolarian assemblages to observed Sea Surface Temperature (SST) values. The transfer functions have a standard error of 1.16 °C in the estimate of winter SST, 0.81 °C in that of summer SST.     

Scale‐dependent biases in species counts in a grassland

Abstract. Numbers of plant species were recorded in species‐rich meadows in the Bílé Karpaty Mts., SE Czech Republic, with the aim to evaluate the sampling error made by well‐trained observers. Five observers recorded vascular plants in seven plots ranging from 9.8 cm² to 4 m² independently and were not time‐limited. In larger plots a discrepancy of 10–20% was found between individual estimates, in smaller plots discrepancy increased to 33%, on average. The gain in observed species richness by combining records of individual observers (in comparison with the mean numbers estimated by single observers) decreased from the smallest plot (27–82% for two to five observers) to the largest one (13–25%). However, after misidentified and suspicious records were eliminated, the gain was much lower and became scale‐independent; two observers added 12% species, on average, and the increase by combining species lists made by three or more observers was negligible (3% more on average). It is concluded that most discrepancies between individual observers were caused by misidentification of rare seedlings and young plants. We suggest that in species‐rich meadows plants should be recorded by at least three observers together and that they should consult all problematic plant specimens together in the field, to minimize errors.