Foliage litter turnover and earthworm populations in three beech forests of contrasting soil and vegetation types

Summary Leaf litter decomposition, levels of accumulated litter as well as the abundance and biomass of earthworms were measured in three mature beech forests in southern Sweden: one mor site, one poor mull site, and one rich mull site. The disappearance rate of beech litter, measured with litter bags, increased with increasing soil fertility. On the rich mull site, the disappearance rate was much higher than in the two other forests, due to the combined effects of higher earthworm activity, more favouable soil moisture conditions, and higher litter quality. Incubating the litter in finely meshed bags (1-mm mesh) to exclude macrofauna had a great effect on litter mass loss in the rich mull site, but it had only a minor effect in the other sites. Simultaneous incubations of local and transplanted leaf litter on the three study sites showed that the substrate quality of the litter increased in the order: mor site — poor mull site — rich mull site. Lignin, N, and P concentrations of the leaf litter failed to explain the observed differences in decomposition rates, and acid/base properties are suggested to be more important. Earthworm numbers per m² were 2.5 (1 species) in the mor, 40 (6 species) in the poor mull and 220 (9 species) in the rich mull forest. Soil chemical conditions, notably pH, were suggested as the main factors determining the inter-site differences in abundance and species composition of earthworms. The role of litter decomposition and earthworm activity in the accumulation of organic matter in the forest floor in different types of beech woodlands are discussed.     

Native and non‐native grasses generate common types of plant–soil feedbacks by altering soil nutrients and microbial communities

Soil conditioning occurs when plants alter features of their soil environment. When these alterations affect subsequent plant growth, it is a plant soil feedback. Plant–soil feedbacks are an important and understudied aspect of aboveground–belowground linkages in plant ecology that influence plant coexistence, invasion and restoration. Here, we examine plant–soil feedback dynamics of seven co‐occurring native and non‐native grass species to address the questions of how plants modify their soil environment, do those modifications inhibit or favor their own species relative to other species, and do non‐natives exhibit different plant–soil feedback dynamics than natives. We used a two‐phase design, wherein a first generation of plants was grown to induce species‐specific changes in the soil and a second generation of plants was used as a bioassay to determine the effects of those changes. We also used path‐analysis to examine the potential chain of effects of the first generation on soil nutrients and soil microbial composition and on bioassay plant performance. Our findings show species‐specific (rather than consistent within groups of natives and non‐natives) soil conditioning effects on both soil nutrients and the soil microbial community by plants. Additionally, native species produced plant–soil feedback types that benefit other species more than themselves and non‐native invasive species tended to produce plant–soil feedback types that benefit themselves more than other species. These results, coupled with previous field observations, support hypotheses that plant–soil feedbacks may be a mechanism by which some non‐native species increase their invasive potential and plant–soil feedbacks may influence the vulnerability of a site to invasion.     

Quantifying ecosystem rejuvenation: foliar nutrient concentrations and vegetation communities across a dust gradient and a chronosequence

Background and aims

Due to long-term weathering of land surfaces, aeolian nutrient contributions can become essential to maintain ecosystem fertility and avoid retrogression. However, studies that consider the qualitative and quantitative effects of dust deposition on ecosystem development are rare. We addressed this knowledge gap by studying an active Holocene dust flux gradient along a 6,500 year old dune ridge and a nearby chronosequence outside the influence of dust deposition in a super-humid, high leaching environment, on the west coast of the South Island in New Zealand.

Methods

Along both sequences we measured foliar nutrients of two main tree species (Dacrydium cupressinum, Prumnopitys ferruginea) and analysed vegetation communities in survey plots.

Results

Along the dust gradient, foliar phosphorus (P) concentrations increased up to 50 % with increasing dust flux. Across the nearby chronosequence a rapid decline of up to 50 % in foliar [P] occurred within the first 2,000 years after which it plateaued. At the highest dust flux rate, closest to the dust source, foliar [P] matched those of surfaces that are 5,702 to 6,098 years younger than the 6,500 year old dune. Vegetation communities along the dust gradient showed increasing relative abundance of species typical for successional communities on immature soils (Entisols, Inceptisols), while canopy cover and basal area (total, angiosperms, conifers) did not respond to increasing dust deposition. Tree fern basal area, however, positively responded to the dust flux.

Conclusion

We conclude that naturally occurring dust deposition can fertilise ecosystems significantly, creating a foliar nutrient status normally found on land surfaces that are up to 94 % younger and vegetation communities that are typical for successional stages on young soils (Entisols, Inceptisols). We suspect that these observations mainly reflect more plant-available P in the ecosystem as a result of dust fertilisation. Thus, dust deposition can be an important mechanism to avoid or retard the development of an ecosystem toward natural retrogression. This is the first study to directly quantify the fertilising capacity of natural dust deposition by calibrating its rejuvenating effect against a well-dated successional vegetation sequence.     

Quality control by leaf-cutting ants: evidence from communities of endophytic fungi in foraged and rejected vegetation

Leaf-cutting ants of the genera Acromyrmex and Atta forage vegetation for incorporation into their mutualistic fungal gardens. However, the presence of certain endophytic fungi in this predominantly leaf-based material could affect the fungal garden and thus the choice of material by the ants. The present study was conducted to document the endophytic fungal communities occurring in the vegetation being transported by workers of Atta laevigata into their nests and to compare this community structure with that of the vegetative material subsequently rejected from the nests. We found considerable diversity in the fungi isolated. Acremonium, Cylindrocladium, Drechslera, Epicoccum, Fusarium, Trichoderma, Ulocladium and two unidentified morphospecies were significantly more common in rejected compared with foraged material, and some of these genera include mycoparasites, which could represent a threat to the fungal gardens. Conversely, Colletotrichum, Pestalotiopsis, Phomopsis, Xylaria and an unidentified morphospecies were more common in carried compared with rejected material. The possibility that ants have a ‘quality-control’ mechanism based on the presence of antagonistic fungal endophytes is discussed, as is the potential use of these fungi as biocontrol agents against Attini pests.     

Forest soil fertility: the base of relationships between soil and vegetation

To understand the relationships between soils and vegetation in forest ecosystems, it is necessary to establish the spatial levels where they are implemented and to determine parameters characterizing the relationships. The key step in the development of the hierarchy of the spatial levels is the establishment of the elementary unit of the soil-vegetation cover. Such a unit, called tessera, is substantiated. Studies conducted in boreal forests have demonstrated a close association between the vegetation and soil components of tesserae. It can be quantitatively described in terms of informative fertility parameters: pH; C: N ratio; contents of nutrients, such as Ca and Mn; etc. Thus, data on the relationships between soil and vegetation determined in tesserae can be summarized at higher spatial levels of the forest cover: parcel, biotope, etc.     

The algal vegetation of coastal defences: A case study from NW England

Summary

Beach erosion along the N coast of the Wirral peninsula (NW England) made it necessary to build a series of new defences. Completion of these in 1985 preceded a major reduction of pollution levels in the R. Mersey. The object of this investigation has been to see how marine algal vegetation and floristic diversity have developed on the defences following the improvement in the water quality of the estuary. Two types of material were used in construction: precast concrete blocks (smooth surface) and limestone rocks (rough surface). These materials were used in the building of reefs and for the revetment of old seawall, parts of which were left unreveted. Analysis of samples from these substrata revealed no significant differences in species zonation, in abundance of Fucus or in numbers of species. However, the floristic composition of the block samples differed significantly from that on the rocks, in spite of the fact that they were placed on the shore at the same time. The rock flora includes more filiform algae which exploit the greater variety of microhabitat present. They seem also to promote species diversity more effectively than green foliaceous algae. The flora of the defences now includes species not seen on Merseyside for a century and others new to the area.     

Links between plant community composition,soil organic matter quality and microbial communities in contrasting tundra habitats

Plant communities, soil organic matter and microbial communities are predicted to be interlinked and to exhibit concordant patterns along major environmental gradients. We investigated the relationships between plant functional type composition, soil organic matter quality and decomposer community composition, and how these are related to major environmental variation in non-acid and acid soils derived from calcareous versus siliceous bedrocks, respectively. We analysed vegetation, organic matter and microbial community compositions from five non-acidic and five acidic heath sites in alpine tundra in northern Europe. Sequential organic matter fractionation was used to characterize organic matter quality and phospholipid fatty acid analysis to detect major variation in decomposer communities. Non-acidic and acidic heaths differed substantially in vegetation composition, and these disparities were associated with congruent shifts in soil organic matter and microbial communities. A high proportion of forbs in the vegetation was positively associated with low C:N and high soluble N:phenolics ratios in soil organic matter, and a high proportion of bacteria in the microbial community. On the contrary, dwarf shrub-rich vegetation was associated with high C:N and low soluble N:phenolics ratios, and a high proportion of fungi in the microbial community. Our study demonstrates a strong link between the plant community composition, soil organic matter quality, and microbial community composition, and that differences in one compartment are paralleled by changes in others. Variation in the forb-shrub gradient of vegetation may largely dictate variations in the chemical quality of organic matter and decomposer communities in tundra ecosystems. Soil pH, through its direct and indirect effects on plant and microbial communities, seems to function as an ultimate environmental driver that gives rise to and amplifies the interactions between above- and belowground systems. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Taxonomic and functional diversity of atrazine‐degrading bacterial communities enriched from agrochemical factory soil

Aims: To characterize atrazine‐degrading potential of bacterial communities enriched from agrochemical factory soil by analysing diversity and organization of catabolic genes. Methods and Results: The bacterial communities enriched from three different sites of varying atrazine contamination mineralized 65–80% of ¹⁴C ring‐labelled atrazine. The presence of trzN‐atzBC‐trzD, trzN‐atzABC‐trzD and trzN‐atzABCDEF‐trzD gene combinations was determined by PCR. In all enriched communities, trzN‐atzBC genes were located on a 165‐kb plasmid, while atzBC or atzC genes were located on separated plasmids. Quantitative PCR revealed that catabolic genes were present in up to 4% of the community. Restriction analysis of 16S rDNA clone libraries of the three enrichments revealed marked differences in microbial community structure and diversity. Sequencing of selected clones identified members belonging to Proteobacteria (α‐, β‐ and γ‐subclasses), the Actinobacteria, Bacteroidetes and TM7 division. Several 16S rRNA gene sequences were closely related to atrazine‐degrading community members previously isolated from the same contaminated site. Conclusions: The enriched communities represent a complex and diverse bacterial associations displaying heterogeneity of catabolic genes and their functional redundancies at the first steps of the upper and lower atrazine‐catabolic pathway. The presence of catabolic genes in small proportion suggests that only a subset of the community has the capacity to catabolize atrazine. Significance and Impact of the Study: This study provides insights into the genetic specificity and the repertoire of catabolic genes within bacterial communities originating from soils exposed to long‐term contamination by s‐triazine compounds.     

A vegetation map of The Netherlands,based on the relationship between ecotopes and types of potential natural vegetation

Summary The method of mapping the vegetation on scale 1: 200,000 and the starting points in relation to the potential natural vegetation and ecotopes, are discussed.In view of the planological background of this study, some restrictions have been added to the concept of potential natural vegetation, concerning the period of development and the human influence.The relationship between soil, ground water and vegetation was studied, which resulted in the map of the potential natural vegetation.Each type of potential natural vegetation stands for a series of vegetation types on the same site. Seven main series, with a number of sub-series are distinguished. Within each vegetation series the plant communities have been spread over five groups, according to their structure and naturalness.Ecotopes and ecotope complexes are considered as landscape ecological units. A list of ecotopes was obtained by interpreting topographical maps and by inventory data.The actual vegetation was mapped by estimating the size of the ecotopes within the separate areas. It was expressed in a five figure code for the five groups from the vegetation and ecotopes is combined into the vegetation map of The Netherlands.Interpretation problems, some of them specific for The Netherlands, are discussed and some remarks are made on the necessity of further research.Contribution to the Symposium on Plant Species and Plant Communities, held at Nijmegen, 11–12 November 1976, on the occasion of the 60th birthday of Professor Victor Westhoff.Nomenclature follows Heukels-van Ooststroom, Flora van Nederland, 18e druk, 1975, Wolters-Noordhoff, Groningen; nomenclature of syntaxa follows Westhoff & den Held (1969)     

Terrestrial carbon‐cycle feedback to climate warming: experimental evidence on plant regulation and impacts of biofuel feedstock harvest

Feedback between global carbon (C) cycles and climate change is one of the major uncertainties in projecting future global warming. Coupled carbon–climate models all demonstrated a positive feedback between terrestrial C cycle and climate warming. The positive feedback results from decreased net primary production (NPP) in most models and increased respiratory C release by all the models under climate warming. Those modeling results present interesting hypotheses of future states of ecosystems and climate, which are yet to be tested against experimental results. In this study, we examined ecosystem C balance and its major components in a warming and clipping experiment in a North America tallgrass prairie. Infrared heaters have been used to elevate soil temperature by approximately 2 °C continuously since November 1999. Clipping once a year was to mimic hay or biofuel feedstock harvest. On average of data over 6 years from 2000 to 2005, estimated NPP under warming increased by 14% without clipping (P<0.05) and 26% with clipping (P<0.05) in comparison with that under control. Warming did not result in instantaneous increases in soil respiration in 1999 and 2000 but significantly increased it by approximately 8% without clipping (P<0.05) from 2001 to 2005. Soil respiration under warming increased by 15% with clipping (P<0.05) from 2000 to 2005. Warming‐stimulated plant biomass production, due to enhanced C₄ dominance, extended growing seasons, and increased nitrogen uptake and use efficiency, offset increased soil respiration, leading to no change in soil C storage at our site. However, biofuel feedstock harvest by biomass removal resulted in significant soil C loss in the clipping and control plots but was carbon negative in the clipping and warming plots largely because of positive interactions of warming and clipping in stimulating root growth. Our results demonstrate that plant production processes play a critical role in regulation of ecosystem carbon‐cycle feedback to climate change in both the current ambient and future warmed world.     

Soil bacterial communities are shaped by temporal and environmental filtering: evidence from a long‐term chronosequence

Soil microbial communities are abundant, hyper‐diverse and mediate global biogeochemical cycles, but we do not yet understand the processes mediating their assembly. Current hypothetical frameworks suggest temporal (e.g. dispersal limitation) and environmental (e.g. soil pH) filters shape microbial community composition; however, there is limited empirical evidence supporting this framework in the hyper‐diverse soil environment, particularly at large spatial (i.e. regional to continental) and temporal (i.e. 100 to 1000 years) scales. Here, we present evidence from a long‐term chronosequence (4000 years) that temporal and environmental filters do indeed shape soil bacterial community composition. Furthermore, nearly 20 years of environmental monitoring allowed us to control for potentially confounding environmental variation. Soil bacterial communities were phylogenetically distinct across the chronosequence. We determined that temporal and environmental factors accounted for significant portions of bacterial phylogenetic structure using distance‐based linear models. Environmental factors together accounted for the majority of phylogenetic structure, namely, soil temperature (19%), pH (17%) and litter carbon:nitrogen (C:N; 17%). However, of all individual factors, time since deglaciation accounted for the greatest proportion of bacterial phylogenetic structure (20%). Taken together, our results provide empirical evidence that temporal and environmental filters act together to structure soil bacterial communities across large spatial and long‐term temporal scales.     

Modelling respiration of vegetation: evidence for a general temperature‐dependent Q10

Temperature responses of rates of respiratory CO₂ efflux from plants, soils, and ecosystems are frequently modelled using exponential functions with a constant Q₁₀ near 2.0 (fractional change in rate with a 10 °C increase in temperature). However, we present evidence that Q₁₀ declines with short‐term increases in temperature in a predictable manner across diverse plant taxa. Thus, models using a constant Q₁₀ are biased, and use of a temperature‐corrected Q₁₀ may improve the accuracy of modelled respiratory CO₂ efflux in plants and ecosystems in response to temperature and predicted global climate changes.     

The decomposition of sugar beet residues: mineralization versus immobilization in contrasting soil types

The leaves and crowns from ¹⁵N-labelled sugar beets were incubated in either a silty clay loam or sand soil for almost one year. Four additions of fresh, chopped residues mixed with soil were tested: ¹⁵N-labelled leaves alone, ¹⁵N-labelled leaves plus unlabelled crowns, unlabelled leaves plus ¹⁵N-labelled crowns, and ¹⁵N-labelled crowns alone; a control with no addition was also incubated. The C:N ratio of the leaves was 11 and that of the crowns 40. Incubations were carried out in pots kept at 20 °C and optimal moisture conditions. The leaves mineralized N from the start of the experiment but the addition of crowns to soil at first caused immobilization of nitrogen followed eventually by mineralization after 6 or 12 weeks depending on soil type. The extra amounts of mineral N found in soil at the end of the experiment where additions were made corresponded to the sum of the background mineralization and the addition; no priming effects were encountered. Very slight differences only were found between the initial rates of mineralization of C in all of the treatments. Although there was also little difference between the sand and silty clay loam soils in the direct mineralization of nitrogen from the sugar beet leaves, where N was first immobilized (i.e. from crowns or a mixture) re-release of N took place more quickly in the sand soil. The total recovery of¹⁵ N found in soils after 24 weeks incubation ranged from 70% to 90% with least being lost from the sugar-rich but N-deficient crowns. Where leaves plus crowns were incubated together both residues contributed to the microbial biomass N.In practice, immobilization of this magnitude and duration (expressed as a temperature sum) could exceed the growth period of a spring sown crop. The actual immobilization found in any one field is likely to depend on the C:N ratio of the residues and could account for much of the variation in the residual benefit of sugar beet residues reported in the literature.     

Ecology of algal communities of different soil types from Cierva Point, Antarctic Peninsula

During summer 2005/2006, we characterized three sampling sites on mineral soils and four on ornithogenic soils from Cierva Point, Antarctic Peninsula, in terms of topographic and abiotic features (altitude, slope, magnetic direction, temperature, texture, pH, conductivity, organic matter, moisture and nutrient concentrations), and compared their microalgal communities through taxonomic composition, species richness, diversity, chlorophyll a content and their variation in time. Average values of pH, moisture, organic matter and nutrient concentrations were always significantly lower in mineral than in ornithogenic soils. Low N/P mass ratio showed potential N-limitation of biomass capacity in the former. On the other hand, the results suggested that physical stability is not as a key stress factor for mineral soil microalgae. Chlorophyll a concentration was not only higher in ornithogenic soils, but it also showed a wider range of values. As this parameter was positively correlated with temperature, pH, nutrients, organic matter and moisture, we cannot come to conclusions regarding the influence of each factor on algal growth. Communities of mineral soils were significantly more diverse than those of enriched ornithogenic soils due to higher species richness as well as higher equitability. Also, their structure was steadier over time, as shown by a cluster analysis based on relative frequency of algal taxa. Although Cyanobacteria and Bacillariophyceae dominated almost all samples, Chlorophyceae represented 34% of the 140 taxa recorded, and most of them observed only in cultures. The detection under controlled conditions of a high latent species richness in harsh mineral soil sites shows that the composition and equitability of these microalgal communities would be more prone to modification due to the manifold local consequences of climatic change than those of ornithogenic soils.     

Predator‐induced morphological defences as by‐products of prey behaviour: a review and prospectus

Predator‐induced morphological defences (PIMDs) are ubiquitous. Many PIMDs may be mediated by prey behaviour rather than directly cued by predators. A survey of 92 studies indicated 40 that quantified prey behaviour, all of which document positive associations between defence production and activity reduction. Thus, PIMDs are associated with changes in prey activity, which could have caused the morphological change. We propose two possible mechanisms: 1) decreased activity reduces feeding rate, resulting in lower growth and morphological change; and 2) activity reduction conserves energy, which is reallocated for growth, subsequently changing morphology. Resource availability also causes similar morphological change to predator presence, suggesting confounding effects of resources and predators with current methodology. Future studies should estimate food ingestion, assimilation efficiency, and growth rate in the presence and absence of predators, crossing predator presence with resource levels. Not all PIMDs will be behaviourally‐mediated, but consideration of causal linkages between prey behaviour and PIMDs is warranted.     

Spatial heterogeneity of soil nutrients and plant species in herb-dominated communities of contrasting land use

Recent interest in spatial pattern in terrestrial ecosystems has come from an awareness of the intimate relationship between spatial heterogeneity of soil resources and maintenance of plant species diversity. Soil and vegetation can vary spatially in response to several state factors of the system. In this study, we examined fine-scale spatial variability of soil nutrients and vascular plant species in contrasting herb-dominated communities (a pasture and an old field) to determine degree of spatial dependence among soil variables and plant community characteristics within these communities by sampling at 1-m intervals. Each site was divided into 25 1-m² plots. Mineral soil was sampled (2-cm diameter, 5-cm depth) from each of four 0.25-m² quarters and combined into a single composite sample per plot. Soil organic matter was measured as loss-on-ignition. Extractable NH₄ and NO₃ were determined before and after laboratory incubation (28 days at 27°C) to determine potential net N mineralization and nitrification. Cations were analyzed using inductively coupled plasma emission spectrometry. Vegetation was assessed using estimated percent cover. Most soil and plant variables exhibited sharp contrasts between pasture and old-field sites, with the old field having significantly higher net N mineralization/nitrification, pH, Ca, Mg, Al, plant cover, and species diversity, richness, and evenness. Multiple regressions revealed that all plant variables (species diversity, richness, evenness, and cover) were significantly related to soil characteristics (available nitrogen, organic matter, moisture, pH, Ca, and Mg) in the pasture; in the old field only cover was significantly related to soil characteristics (organic matter and moisture). Both sites contrasted sharply with respect to spatial pattern of soil variables, with the old field exhibiting a higher degree of spatial dependence. These results demonstrate that land-use practices can exert profound influence on spatial heterogeneity of both soil properties and vegetation in herb-dominated communities.