Population dynamics of Macrophomina phaseolina in relation to disease management: A review

Macrophomina phaseolina (Tassi) Goid. causes seedling blight, charcoal rot, leaf blight, stem and pod rot on over 500 plant species in different parts of the world. The pathogen survives as sclerotia formed in host tissues which are released into the soil as tissue decay. Low soil moisture is considered the more important predisposing factor for M. phaseolina-induced diseases than high temperature. The intensity of the disease on a crop is related to the population of viable sclerotia in the soil and abiotic factors. The influence of various management strategies in reducing the number of viable propagules of the pathogen in the soil has been studied in order to minimize the impact of the disease. Any management approach that reduces inoculum density in the soil may reduce disease incidence on the host. However, to reduce inoculum density, quantitative determination of viable propagules from soil is necessary in order to understand the effect of management strategies on the population dynamics of this pathogen. Considerable work has been done on organic amendments, changing crop sequences with tolerant crops, fumigants, herbicides and tillage in managing M. phaseolina populations in the soil and the resulting disease. Solarization has been used in controlling M. phaseolina in different countries where this pathogen is causing disease on economically valuable crops. However, this method of soil disinfestation was effective in eliminating viable populations at the top soil layer although by combining other approaches its effectiveness was improved at lower soil depth. Use of biological control agents with or without organic amendments or after solarization has emerged to be a practical management approach in the control of M. phaseolina. In this paper, an attempt has been made to review those research findings where the influence of various management approaches on survival of M. phaseolina mainly sclerotia have been investigated.     

Effect of soil solarization on corn stalk rot

Seven weeks solarization of irrigated soil raised its temperature by 11.5°C over non-solarized soil at 10 cm depth and effectively controlled weeds (98.5%), stalk borer (8.9%) and stalk rot disease (69.1%) in corn. Solarization also reduced symptoms of Fusarium moniliforme and Macrophomina phaseolina significantly by 64.2% and 78.4%, respectively, and completely controlled M. phaseolina in corn cultivars, viz. Pool-10, Shaheen and Gauher. Whereas symptoms of F. moniliforme were observed in these cultivars, Fusarium graminearum was not observed except in two cultivars, Shaheen and Akbar. Growth of crop planted in solarized plots was better and it yielded almost one to three times more grains in cultivars under test. Soil analysis immediately following solarization revealed that essential elements were readily available in simpler forms, which may have increased pest resistance and reduced stalk breakage.     

Soil solarisation, amendments and bio-control agents for the control of Macrophomina phaseolina and Fusarium oxysporum f.sp. cumini in aridisols

The effects of soil solarisation, residue incorporation, summer irrigation and biocontrol agents singly or in combination on survival of Macrophomina phaseolina and Fusarium oxysporum f.sp. cumini were ascertained in the 2000 and 2001 summer seasons. In amended plots, temperature increased by 2.5°C over non‐amended plots (42–51°C) at various soil depths. Combining amendments and soil solarisation elevated the soil temperatures by 0.5–5°C and 2.5–13.0°C compared to non‐amended solarised and non‐solarised plots, respectively. These treatment combinations significantly reduced M. phaseolina and Fusarium propagules compared to control. Of these, combining mustard pod residues with soil solarisation almost eliminated viable propagules of both the pathogens at 0–30 cm soil depth. However, a combination of mustard pod residue and oil‐cake (2.5 + 0.5 ton ha^?1) with only one summer irrigation also caused pronounced reduction in pathogenic propagules, which was equal to that recorded in non‐amended solarised plots. The effect of surviving propagules of M. phaseolina and Fusarium on incidence of dry root rot on clusterbean and wilt on cumin was studied in subsequent rainy and winter seasons, respectively. Significant reductions in both diseases were recorded in residue and biocontrol amended plots with or without polyethylene mulching compared to non‐amended control. The lowest plant mortality in both the crops was recorded in mustard residue amended solarised plots in a two year field experiment. However, the disease indices in the plots having a combination of mustard residues and oil‐cake amendment with one summer irrigation was equal to that achieved in the treatment having polyethylene mulching. These results suggest that in hot arid regions use of Brassica residues can be a practical and feasible substitute for polyethylene mulching in managing soil‐borne diseases.     

Integrating sub-lethal heating with Brassica amendments and summer irrigation for control of Macrophomina phaseolina

Effects of varying intensities of sub-lethal heating were ascertained in improving the efficiency of Brassica amendments and summer irrigation on survival of Macrophomina phaseolina, a dry root rot pathogen. Sub-lethal heating (45–55°C) of M. phaseolina infested dry soil reduced the viable propagules by only 12.8% in a period of 90 days. One summer irrigation without sub-lethal heating caused 33.9% reduction in M. phaseolinapropagules, which improved to 43.3% when it was combined with 60 days of sub-lethal heating. Addition of the Brassicaamendments to irrigated soil resulted in significant reduction (60.4–71.6%) in counts of M. phaseolinabut this reduction improved (89.4–96.1%) when sub-lethal heating was combined with amendments. Mustard oil-cake (0.18% w/w) was found to be the most effective with reduction but a 94% inoculum reduction by mustard pod straw (0.36% w/w) was also achieved at 0–30 cm soil depth under similar conditions. Moderate heat level could not exert detectable weakening effect on M. phaseolinapropagules. These results suggest a practical cultural control of soil-borne pathogens by combining sub-lethal heating, Brassica amendments with one summer irrigation.     

Incidence of charcoal rot of sorghum and soil populations of Macrophomina phaseolina associated with sorghum and native vegetation in Somalia

Studies were conducted in the Bay Region of Somalia to determine the incidence of charcoal rot in sorghum incited by Macrophomina phaseolina and the soil population of M. phaseolina in sorghum fields and areas of native vegetation. Charcoal rot was detected in 34 of 40 sorghum fields. Incidence (percent sorghum hills with diseased plants) in the four regional districts was 21, 70, 20 and 35% (mean of 15 hills/field and 10 fields/district) for Baidoa, Burhakaba, Dinsoore and Quansadhere, respectively. Soil collected from the 40 sorghum fields and from 40 native vegetation sites (10 in each district) all contained M. phaseolina. Mean soil populations for sorghum fields and native vegetation sites were 25.2 and 2.5 microsclerotia g^–1 soil, respectively. Soil populations of M. phaseolina in sorghum fields were significantly (p=0.05) different from populations in native vegetation sites and ranged from 7 to 107 and 0.1 to 14.0 microsclerotia g^–1 soil, respectively. Incidence of charcoal rot in sorghum was positively correlated with soil populations of M. phaseolina (r=0.53, p= 0.01). Correlation between ratoon failure and disease incidence was also highly significant (r=0.48, p=0.01). Correlation between ratoon failure and soil population of M. phaseolina was not significant (r=0.17, p=0.10). Only one out of 30 seed lots of sorghum grown in the Bay Region contained seed infected with M. phaseolina.     

Effect of organic soil amendments on the incidence of stalk rot of maize

Five organic materials, Calopogonium sp. leaves, rice straw, mixed wood saw dust of Terminalia sp. Triplochyton sp. and Kaya sp., fresh guinea grass and poultry manure were added to soil with a recent history of high stalk rot of maize caused by Macrophomina phaseolina and Fusarium moniliforme. The two stalk rot organisms reacted differently to the organic amendments. All the amendments produced significantly less Fusarium stalk rot disease than the unamended control. Amendment of soil with fresh Calopogonium leaves was almost ineffective in controlling the incidence of Macrophomina phaseolina. Organic amendment with poultry manure increased the disease casued by M. phaseolina. The other amendments appeared to be equally effective in checking the disease. Increased microbial population due to amendment may play some role in disease suppression.     

Biological control of root rot fungus <Emphasis Type="Italic">Macrophomina phaseolina</Emphasis> and growth enhancement of <Emphasis Type="Italic">Pinus roxburghii</Emphasis> (Sarg.) by rhizosphere competent <Emphasis Type="Italic">Bacillus subtilis</Emphasis> BN1

Bacterial isolates having antifungal and good plant growth-promoting attributes were isolated from chir-pine (Pinus roxburghii) rhizosphere. An isolate, Bacillus subtilis BN1 exhibited strong antagonistic activity against Macrophomina phaseolina, and other phytopathogens including Fusarium oxysporum and Rhizoctonia solani. It was characterized and selected for the present studies. BN1 resulted in vacuolation, hyphal squeezing, swelling, abnormal branching and lysis of mycelia. The cell-free culture filtrate of BN1 inhibited the growth of M. phaseolina. Pot trial study resulted in statistically significant increase in seedling biomass besides reduction in root rot symptoms in chir-pine seedlings. BN1 treatment resulted in 43.6% and 93.54% increases in root and shoot dry weights respectively, as compared to control. Also, 80–85% seed viability was recorded in treatments receiving BN1 either alone or in the presence of M. phaseolina, compared to 54.5% with M. phaseolina. Bioinoculant formulation study suggested that maximum viability of bacteria was in a sawdust-based carrier. B. subtilis BN1 produced lytic enzymes, chitinase and β-1,3-glucanase, which are known to cause hyphal degradation and digestion of the cell wall component of M. phaseolina. In the presence of M. phaseolina, population of B1 was 1.5 × 10⁴ c.f.u. g⁻¹ root after one month, which increased to 4.5 × 10⁴ c.f.u. g⁻¹ root in three months. Positive root colonization capability of B. subtilis BN1 proved it as a potent biocontrol agent.     

Macrophomina phaseolina – Meloidogyne javanica disease complex in balsam (Impatiens balsamina): a new report

Balsam seedlings were inoculated with root-knot nematode Meloidogyne javanica Race-2 and Macrophomina phaseolina either individually or concomitantly, as well as sequentially with an interval of 15?days between the nematode or fungal inoculations to determine whether the interaction was concomitant or sequential. The greater reduction in plant growth characters was observed in the plants inoculated with M. javanica and M. phaseolina, either concomitantly or sequentially as compared to their individual inoculation. However, the highest reduction in plant growth characters were recorded in the plants inoculated with M. javanica Race-2 15?days prior to M. phaseolina followed by concomitant-inoculated M. javanica Race-2 and M. phaseolina, and M. phaseolina 15?days prior to M. javanica. The number of galls/root system and the reproduction factor of the root-knot nematode was reduced in the presence of root-rot fungus. The intensity of root-rot caused by M. phaseolina increased in the presence of root-knot nematode M. javanica as compared to when M. phaseolina was inoculated individually. Moreover, stem and collar-rot symptoms caused by M. phaseolina appeared only in the presence of root-knot nematode.     

A direct observation technique for evaluating sclerotium germination by Macrophomina phaseolina and effects of biocontrol materials on survival of sclerotia in soil

Germination of sclerotia of Macrophomina phaseolina was quantified by direct microscopic observation following application of experimental treatments in vitro and incubation of sclerotia in soil. To assay germination, pieces of agar containing sclerotia were macerated in dilute, liquid cornmeal agar on glass slides; thinly spread; and incubated in a saturated atmosphere for 18–22 h. Germinated sclerotia then were identified by morphological features of germ hyphae. Frequencies of germination were similar in three dilute agar media. Germination was not affected by air-drying sclerotia for 2 weeks, but it was significantly reduced after 4 weeks and greatly reduced or eliminated after 6 or 8 weeks. Survival of sclerotia for 14 days in soil was greatest at 50, 75, and 100% moisture-holding capacity, less at 0 and 25%, and least at 125% (flooded soil). Incorporation of ground poultry litter into soil at 5% by weight reduced survival of sclerotia after 13 days, and incorporation of litter at 10% nearly eliminated it. These results indicate that the direct-observation technique may be used to evaluate animal wastes and other agricultural byproducts for biocontrol activity against sclerotia of M. phaseolina in soil.     

Genetical and biological control of cotton ashy stem caused by Macrophomina phaseolina in outdoor pot experiment

Two outdoor pot experiments were carried out to evaluate the reaction of 11 commercial Egyptian cotton cultivars Macrophomina phaseolina, the incitant of ashy stem in cotton and to evaluate the antagonistic ability of 27 isolates of Trichoderma sp. against pathogen cotton cultivars Giza 85, Giza 87, Giza 89 and Giza 90 were resistant to M. phaseolina because both survival and plant height of these cultivars was not affected when the soil was infested with the pathogen. None of the cultivars were found to be immune to highly pathogenic of M. phaseolina isolate. Of the 27 isolate’s of Trichoderma that were evaluated, the best antagonistic performance was given by isolates nos. 2, 10, and 16 were promising for commercialization because they significantly increased survival and improved plant height and dry weight of the surviving cotton seedlings.     

Germination and production ofMacrophomina phaseolina microsclerotia as affected by oxygen and carbon dioxide concentration

Summary Germination of microsclerotia ofMacrophomina phaseolina was observed at O₂ concentrations of 16% or higher in autoclaved soil. Germination was delayed but otherwise unaffected as O₂ decreased from 21 to 16% and was in all cases complete in 32 hours. Laboratory-produced microsclerotia consistently germinated more rapidly and seemed more independent of O₂ concentrations within the range that permitted germination than naturallyproduced microsclerotia.Population changes in soil as measured by microsclerotial counts were inversely correlated with depth of interment and reduced O₂ concentration. Our inability to detect significantly growth responses ofM. phaseolina in non autoclaved soil was apparently related to limited O₂ although other possibilities are discussed.Contribution of the Missouri Agricultural Experiment Station Scientific Journal Series No. 9124.     

Factors Affecting the Parasitic Activity of Gliocladium virens on Sclerotia of Sclerotinia sclerotiorum and a Note on its Host Range

Aspects of the biology of Gliocladium virens and parasitism of sclerotia of Sclerotinia sclerotiorum in soil were studied. G. virens parasitized and decayed sclerotia of S. sclerotiorum, S. minor, Botrytis cinerea, Sclerotium, rolfsii and Macrophomina phaseolina on laboratory media and caused a reduction in survival of sclerotia of S. sclerotiorum in soil. It was active over a broad range of soil moisture levels and over the entire agricultural soil pH range. The main factor limiting its use as a biological control agent was its temperature requirements.     

Control of charcoal root rot in <Emphasis Type="Italic">Pinus radiata</Emphasis> nurseries with antagonistic bacteria

The objective of this study was to determine the potential of antagonistic bacteria to control charcoal root rot of coniferous seedlings caused by Macrophomina phaseolina (Tassi) Goid. in forest nurseries. Bacterial isolates were collected from nurseries located between Region Metropolitana and the VIII Region of Chile. Antagonists were initially evaluated in in vitro assays based on the ability to inhibit mycelial growth of M. phaseolina, and subsequently in two trials in a Pinus radiata nursery with a natural infestation of the pathogen. For nursery trials, the isolates were selected according to in vitro and field trial pathogen controls. The bacteria were applied as seed treatments and via water irrigation. The trials were conduced in a completely randomized block design. Among 568 bacterial isolates tested in vitro, 19.8% displayed some capacity to inhibit the mycelial growth of M. phaseolina, with inhibition between 1.7% and 67.6%. In the first nursery trial, Bacillus amyloliquefaciens VII 015, Bacillus pumilus IX 030, Bacillus stearothermophilus TM 008 and other two Bacillus sp. (VI 009 and IX 049) strains, significantly reduced the total, pre- and post-emergency mortality of seedlings, but no isolate reduced the incidence of M. phaseolina in seedlings. In the second trial, Bacillus sp. IX 049, VI 099, B. subtilis (IX 007) and a non-identified isolate V 005, decreased the incidence of charcoal root rot. It is concluded that the best of these bacterial antagonists have the potential to control M. phaseolina in P. radiata nurseries.     

Field persistence of the entomopathogenic nematode <Emphasis Type="Italic">Heterorhabditis bacteriophora</Emphasis> in different crops

To investigate nematode establishment and persistence, dauer juveniles (DJs) of Heterorhabditis bacteriophora were applied at 50 cm^-2 in different crops in June and July with conventional spraying equipment and 420 l water ha^-1. Application hardly had any effects on survival and infectivity. The number of DJs reaching the soil was assessed and the establishment and persistence recorded by baiting soil samples with larvae of the wax moth Galleria mellonella. The better the plant canopy was developed the fewer DJs reached the soil during application. Whereas in pasture 77% and in potatoes 78% of the applied nematodes reached the soil, in wheat and peas little less than 50%, in oil-seed rape only 5% and in lupine 6% were recorded. Between 50 and 60% of the soil samples contained H. bacteriophora a month after application with the exception of wheat (>90%) and potatoes (<5%) indicating that the number of nematodes reaching the soil during application had no influence on their establishment in the soil. Probably DJs can survive in the plant canopy and reach the soil later after application. The percentage of nematode-positive soil samples dropped considerably after tillage. In potatoes no nematodes were recovered after two months, which probably was also due to the intensive movement of the soil. Although nematodes are susceptible to freezing, temperatures below 0°C during the winter did not extinguish the H. bacteriophora population. In field crops EPN usually persisted not much longer than one year. The longest persistence of H. bacteriophora was detected 23 months after release in beans followed in rotation by wheat with red clover as cover crop. In this field larvae of the pea weevil Sitona lineatus (Coleoptera: Curculionidae) were detected in soil samples and found infected with the released nematode population. In the laboratory the field soils were tested for persistence of H. bacteriophora at 8°C and a half-life of 24.8 days was recorded in the absence of host insects and plants. Thus long-term persistence in the field was a result of recycling in host insects, which could not be detected in other crops than beans and clover. As H. bacteriophora seems to be restricted in its host potential, this species disappears after release once the host population is not available anymore.     

Temperature response,pathogenicity, seed infection and mutant evaluation against Macrophomina phaseolina causing charcoal rot disease of sesame

Charcoal rot caused by Macrophomina phaseolina is a serious disease of sesame in Pakistan. M. phaseolina sesame isolate was subjected to growth rate test at 10, 15, 20, 25, 30, 35 and 40°C. The optimum temperature for fungal growth and microsclerotia production was found to be 30–35°C. Gray to black, radial fungal colonies with intermediate mycelial growth and jet black oval to round microsclerotia were observed at this optimum range. M. phaseolina was found to be pathogenic against all the 18 tested plant species and this pathogenicity proved its necrophytic behavior. Seed infection efficiency of M. phaseolina was 100% with significant reduction in seed index. For two consecutive years 21 mutants/varieties were screened in the field for their reactions to charcoal rot disease. During 2007 three mutants NS11704S1, NS11304S2 and NS26004 were ranked as resistant while others were moderately resistant to highly susceptible. During 2008 all mutants showed a susceptible to highly susceptible reaction with variable disease reactions. All over screening results revealed that four mutants viz, NS13P1, NS163-1, NS270P1 and NS26004 showed about 50% stand with consistent performance during both years under optimum disease conditions and can be used to manage the disease following the disease management strategies, however in the future improvement for high seed yield along with resistance is a prerequisite for sustainable high production.     

Development of linkage map in F2 population of selected parents with respect to Macrophomina phaseolina resistance trait using screened polymorphic RAPD and developed SCAR markers of jute

Two molecular markers (RAPD and simple sequence repeat (SSR)) were applied on 12 Corchorus capsularis jute samples. Two of them were Macrophomina phaseolina-resistant and the remaining eight were M. phaseolina-susceptible accessions. Eleven SSR primer combinations out of 18 gave the polymorphic results between M. phaseolina-resistant and -susceptible accessions. Five pairs of sequence characterised amplified region (SCAR) primers designated as SCP-4, SCS-3, SCS-13, SCG-10 and SCU-10 were designed based on the polymorphic loci obtained between JRC-412 and CIM-036. Only SCU-10 and SCS-13 produced polymorphic markers corresponding to OPU-10 and OPS-13 amplified from ‘CIM-036’ and JRC-412, respectively. RAPD and SCAR markers were employed for construction of a linkage map using a set of 67 F2 population of a cross between JRC-412 and CIM-036 as a mapping population. Nine markers were assigned to two linkage groups (LGs) covering a total length of 628.4 cM with an average distance of 28 cM between markers.     

A mowing experiment to evaluate the influence of management on the activity of host ants of <Emphasis Type="Italic">Maculinea</Emphasis> butterflies

Maculinea butterflies obligatory parasitize certain species of Myrmica ants. Thus, the presence of the host ant species is a limiting factor for the survival of a Maculinea population. Here, we analyse the influence of vegetation structure and ground temperature on ant diversity and abundance on Maculinea habitats, with the final aim of identifying the environmental variables determining patterns of variation in species composition in order to recommend a mowing regime that will promote our three target species: Maculinea teleius, M. nausithous and M. alcon. Experimental plots with different mowing regimes were established at eight sites in South-Eastern Germany, a region which still contains a number of relatively large, stable populations of these threatened butterfly species. Among the seven different ant species recorded, four belong to the genus Myrmica (M. scabrinodis, M. rubra, M. ruginodis and M. vandeli). Among these, M. scabrinodis results most abundant at all sites. In a CCA analysis of environmental variables recorded at the studied plots, ant species diversity appears largely determined by litter cover, mean temperature, and mean grass cover. Mowing once a year, in the second half of September, after the larvae have left their host plants, enhances the abundance of Myrmica ants in the meadows, and would be the best management compromise for all three species.     

Morphological and pathogenic variability in Macrophomina phaseolina isolates of pigeonpea (Cajanus cajan L.) and their relatedness using principle component analysis

Sixty-one isolates of Macrophomina phaseolina were characterised on the basis of different morphological characters to study the variability in the population. PCA analysis extracted three main components, microsclerotia, texture and colour, from the population that described the variability in the population most appropriately. Colour of the isolates and the presence of the microsclerotia have a significant effect on the area under disease progress curve. Isolates with the production of microsclerotia (M⁺) were more aggressive as compared to isolates with no production of microsclerotia (M^?). The study has brought out pathogenic variation in M. phaseolina, thus better understanding of host pathogen relationship to identify physiologic races in the breeding programme.     

Survival of Beauveria brongniartii in the soil after application as a biocontrol agent against the European cockchafer Melolontha melolontha

The survival of the entomopathogenic fungusBeauveria brongniartii and its efficacyagainst the European cockchafer, Melolontha melolontha, was examined over 16months after application as a biologicalcontrol agent in different soil types inSwitzerland. In the absence of M. melolontha,the reduction of the number of the CFU in thesoil was nearly 90%. In soils with highorganic content and increased catalase activitythe decline in the CFU density of B.brongniartii was more pronounced. At siteswhere M. melolontha was present, thesurvival was significantly longer. Theapplication of B. brongniartii resultedin a maximal infection rate of 75% in the M. melolontha population. The number of CFU ofB. brongniartii in the soil started todecrease only when the M. melolonthapopulation was reduced during the epizootic(reduction of 46% on average). The rapiddecrease of the fungus in the absence of thehost gives further evidence of the highspecificity of the fungus and that asaprophytic multiplication without the host isunlikely. The fungus was isolated on aselective medium as well as by baiting withGalleria mellonella. The latter methoddid not reveal the significant differencesmentioned above, which leads to the assumptionthat the two methods may select for differentfungal strains.     

Pathogenicity of root knot nematode Meloidogyne incognita on okra and its management through botanicals

An investigation was carried out to study the pathogenicity of root knot nematode Meloidogyne incognita on okra and its management through various organic amendments. The inoculum level of 1000 juveniles per plant showed significant reduction in various plant growth parameters, which reveals that M. incognita is a potential pathogen of okra. With the increase in inoculums level of M. incognita (J₂), there was a progressive decrease in various plant growth parameters. The maximum reduction in plant growth parameters was observed at an inoculum level of 4000 juveniles per plant. The efficacy of five organic amendments viz. groundnut cake, castor cake, sunflower cake, linseed cake and sawdust was tested against root knot nematode M. incognita. Amending the soil with different oil cakes was found to be effective in reducing the nematode soil population, number of females, number of egg masses as well as root gall formation in okra. The highest increase in plant growth (13%) and maximum reduction in number of galls (54%), number of females (57%) and number of egg masses (55%) was recorded on application of groundnut cake.