病原菌多糖基因簇在大肠杆菌中的克隆

目的:构建稳定的外源病原菌多糖基因簇克隆载体,为在糖基工程大肠杆菌中利用外源性多糖O-糖基化修饰靶标蛋白奠定基础。方法:PCR扩增大肠杆菌O157、甲型副伤寒沙门菌CMCC50973和铜绿假单胞杆菌CMCC10110的O-多糖合成基因簇,将多糖基因簇与细菌人工染色体p CC1BAC连接后,分别转化O-多糖合成缺陷的大肠杆菌W3110,并用相应多糖抗血清ELISA检测重组大肠杆菌是否利用外源O-多糖生成脂多糖(LPS),从而验证外源多糖基因簇克隆载体在大肠杆菌内是否能够生成相应的O-多糖;在此基础上,将构建的3种外源多糖基因簇克隆载体分别转化表达O-寡糖转移酶和蛋白底物菌毛蛋白Pil E的糖基工程大肠杆菌,用相应的抗血清进行Western印迹检测,以验证克隆的O-多糖能否修饰蛋白底物Pil E。结果:与阴性对照菌相比,带有大肠杆菌O157的O-多糖合成基因簇克隆载体和带有甲型副伤寒沙门菌CMCC50973的O-多糖合成基因簇克隆载体的重组菌ELISA呈阳性,提示大肠杆菌O157和甲型副伤寒沙门菌CMCC50973的O-多糖合成基因簇在大肠杆菌中被利用生成了相应的LPS;而带有铜绿假单胞杆菌CMCC10110的O-多糖合成基因簇克隆载体的重组菌W3110/BAC-10110则ELISA呈阴性。West-ern印迹结果显示,只有带有O157型大肠杆菌O-多糖合成基因簇克隆载体的糖基工程大肠杆菌CLM24/p MMB66EH-pil E-his/p ETtac28-pgl L/BAC-O157在相对分子质量40×103~58×103处出现了特异条带,表明菌毛蛋白Pil E被大肠杆菌O157型O-多糖O-糖基化修饰。结论:建立了大肠杆菌O157、甲型副伤寒沙门菌CMCC50973的O-多糖合成基因簇大片段的克隆载体,克隆的O157型O-多糖合成基因簇可实现O157型多糖对菌毛蛋白Pil E的修饰,从而为在大肠杆菌中建立稳定的利用外源病原菌多糖修饰靶标蛋白的糖基工程大肠杆菌提供了技术基础。     

肺炎链球菌荚膜多糖O-乙酰化修饰的研究进展

肺炎链球菌表面覆盖着一层荚膜,由多糖组成,是肺炎链球菌关键的毒力因子和重要的抗原,也是细菌分型的依据。强毒血清型的荚膜多糖被制成糖疫苗在抗感染方面发挥了巨大作用。荚膜多糖结构复杂,经常被O-乙酰化修饰,这些多变的化学修饰扮演着重要的生物学角色。本文对肺炎链球菌荚膜多糖O-乙酰化修饰的研究进展进行了介绍,包括荚膜多糖的遗传基础、合成途径和血清学特征,荚膜多糖的O-乙酰化修饰的化学结构及其相应的O-乙酰基转移酶,O-乙酰化修饰的化学鉴定和生物学功能。同时,我们也总结了多糖O-乙酰化修饰在肺炎链球菌微进化中的作用和对糖疫苗的影响,并对今后的研究进行了展望。本综述旨在为研究荚膜多糖的O-乙酰化修饰的致病机制奠定基础,也为糖疫苗的设计提供指导。     

沙门菌致病岛2 Ⅲ型分泌系统研究进展

沙门菌(Salmonella)是革兰氏阴性的兼性胞内菌,可引起其广泛宿主的一系列疾病,严重时可导致全身性感染,威胁生命安全。沙门菌致病岛2(SPI2)是与沙门菌全身性感染密切相关的重要毒力基因簇,其编码的Ⅲ型分泌系统2(T3SS2)在沙门菌侵入宿主细胞后开始组装合成,经该装置分泌的多种效应蛋白对沙门菌在宿主细胞内的生存和增殖起着重要作用。近些年来,与沙门菌T3SS2相关的研究一直都是病原微生物领域关注的焦点之一。本文简要综述了SPI2的基因特征、SPI2基因表达的调控、T3SS2的结构和组成、T3SS2的效应蛋白及与T3SS2相关的疫苗研究等方面的主要研究进展。     

生物法合成肠炎沙门菌糖蛋白北大核心CSCD

肠炎沙门菌(Salmonella enteritidis)是一种重要的人兽共患病原菌,在对该菌感染的预防与控制上一直存在困难,而糖蛋白疫苗的出现为其预防提供了新的思路。对于糖蛋白的合成,一般采用传统的化学交联方法,该法制备流程烦琐、生产成本高。因此,探索经济且稳定的生物合成方法非常必要。为了实现生物法合成肠炎沙门菌糖蛋白,本研究利用CRISPR/Cas9方法构建肠炎沙门菌waa L基因缺失株SEΔwaa L,使用银染的方法检测细菌外膜脂多糖(lipopolysaccharide,LPS)的合成情况。使用环形PCR方法构建了表达寡糖转移酶PglL、重组铜绿假单胞菌的外毒素(recombinant Pseudomonas aeruginosa exotoxin A,r EPA)和霍乱毒素B亚单位(cholera toxin B subunit,CTB)的表达质粒,并分别在rEPA的N端和CTB的C端加入了PilE;糖基化位点序列。将重组质粒转化到SE ΔwaaL中,诱导表达后通过Western blotting方法对糖蛋白的合成进行验证,并通过镍柱(Ni-NTA)对糖蛋白进行纯化。结果表明,waaL基因的缺失阻断了肠炎沙门菌LPS正常合成,在该缺失株中rEPA和CTB蛋白均可成功表达。此外,在表达寡糖转移酶PglL的情况下,rEPA和CTB发生了明显的糖基化,其糖基化部分为肠炎沙门菌O抗原多糖。本研究结果证明肠炎沙门菌缺失waaL基因后,在寡糖转移酶PglL的作用下可以将自身O抗原多糖链共价连接到载体蛋白rEPA和CTB上,形成糖蛋白,为生物法合成肠炎沙门菌糖蛋白的研究奠定了基础。     

肠杆菌共同抗原的研究进展

肠杆菌共同抗原(Enterobacterial common antigen,ECA)是由多糖重复单元组成的多聚糖,几乎表达于所有肠杆菌细菌外膜,具有生物学功能。ECA由多基因协同作用而合成,这些基因在肠杆菌细菌基因组上成簇存在,形成ECA抗原基因簇。ECA是重要的毒力因子,在肠杆菌细菌入侵宿主、体内存活等过程中有一定作用。同时,ECA在维持细菌外膜渗透屏障、鞭毛表达、群集运动及抗胆酸胆盐等方面也有重要作用。此外,锚定在细菌脂多糖核心区的ECALPS还是细菌重要的表面抗原,能激发宿主产生高水平抗体,可以作为疫苗研究的靶点。结合笔者的研究,文中对ECA纯化、基因结构和合成、免疫特性、生物学功能及应用等方面进行了综述。     

O139霍乱弧菌O-抗原基因的克隆及表达

霍乱弧菌脂多糖已经被公认为是一种保护性抗原。它是由三部分组成:O-抗原、核心多糖和磷脂A。其O-抗原具有特异的免疫原性及抗原性,霍乱弧菌的抗血清与脂多糖的抗原抗体反应是针对其O-抗原部分。因此,克隆表达O-抗原基因更便于我们进行基因的操作和构建多价疫苗,它比克隆脂多糖基因更具有实际应用价值。 本研究在建立O139霍乱弧菌质粒基因组文库的基础上,利用抗原抗体的凝集反应从基因组文库中初步筛选出可能表达O-抗原的阳     

生物法合成伤寒O-糖蛋白结合疫苗及其免疫原性评估

伤寒由伤寒沙门氏菌(Salmonella Typhi)引发,至今在发展中国家仍是备受关注的重要公共卫生问题。文章通过敲除伤寒菌脂多糖合成途径中O-抗原连接酶基因,转入含脑膜炎奈瑟球菌(Neisseria meningitidis)蛋白糖基化途径中糖基转移酶的表达载体,以及改构的重组铜绿假单胞菌(Pseudomonas Aeruginosa)外毒素A(rEPA_N29)的表达载体,使细胞内能够诱导合成以伤寒O特异性多糖(O-specific polysaccharides, OPS)为目标抗原、以rEPA_N29为载体蛋白的伤寒OPS-rEPA_N29糖蛋白复合物,并对纯化所得复合物进行了免疫原性评价。ELISA测定血清抗体滴度表明,rEPA_N29作为载体蛋白能有效增加糖链的免疫原性,糖蛋白比单独的多糖能诱导产生更好的免疫应答;3次免疫、间隔3周比间隔2周IgG滴度稍有提高;而免疫过量的糖蛋白,抗O-多糖的血清抗体效价并无提升。文章为生物法制备多糖-蛋白结合疫苗提供了新思路,理论上也适用于其他革兰氏阴性菌的疫苗研发。     

合成生物学助力应急疫苗研制

合成生物学具有系统性思维和工程学理念的特点,致力于创造新的生命或新的系统。合成生物学为疫苗研发人员提供了新的思路,不断开发出新疫苗研制的技术平台。通过抗原重构技术,合成的强抗原能够很好地激活VRC0-1种系的B细胞;利用合成生物学合成自组装的纳米颗粒疫苗,能够有效地暴露保守抗原;通过合成生物学完成流感疫苗基因组的快速组装,大大缩短了疫苗的研制周期;通过系统性地改造,重组沙门菌再一次成为疫苗开发的重要工具。合成生物学在应急疫苗研发过程中疫苗研制平台搭建及快速合成新发传染病抗原方面发挥着突出作用。     

Wzz酶对O抗原糖链聚合度的调控

革兰氏阴性细菌表面的O抗原在信号识别、黏附、免疫逃避等过程中发挥着重要作用。根据翻转酶的不同,O抗原的合成可划分为3种机制,其中依赖于Wzy的合成途径(Wzy-dependent)较为普遍。该机制中,wzz基因参与调节O抗原多糖的聚合度。O抗原糖链能够影响致病菌的抗原性并不同程度的刺激免疫系统。基于Wzz的蛋白晶体结构,对wzz基因进行分子改造可以使菌株合成不同大小的O抗原糖链。利用病原菌的O抗原与特定载体蛋白结合而成的糖缀合物疫苗,既具有很好的靶向性,又有较强的免疫原性。因此了解Wzz(调节糖链长短的蛋白)的功能、结构及作用机制对今后糖缀合物疫苗的开发与生产具有重要意义。     

皮肤癣菌外分泌角蛋白酶的研究进展

近年来角蛋白酶成为皮肤癣菌致病机制的研究热点,角蛋白酶在真菌的自身营养、组织入侵及控制宿主的防御机制上都发挥着重要的作用,同时也是研究真菌疫苗的一个候选抗原。     

Structural and genetic relationships between the O-antigens of Escherichia coli O118 and O151

O-antigen (O-polysaccharide) is a highly variable part of the lipopolysaccharide present in the outer membrane of Gram-negative bacteria, which is used as the basis for bacterial serotyping and is essential for the full function and virulence of bacteria. In this work, the structure and genetics of the O-antigens of Escherichia coli O118 and O151 were investigated. Both O-polysaccharides were found to contain ribitol phosphate and have similar structures, the only difference between their backbones being one linkage mode (β1→3 in E. coli O118 vs. β1→2 in E. coli O151), which, most probably, is the linkage between the oligosaccharide repeats (O-units). The O-antigen gene clusters of the two bacteria are organized in the same manner and share high-level identity (>99%). Analysis of the wzy genes from E. coli O118 and O151 strains, which are responsible for the linkage between O-units, revealed only one nucleotide substitution, resulting in one amino acid residue substitution. The possible genetic events that may lead to the structural difference between two O-antigen structures are discussed. Salmonella O47 has the same O-unit backbone and a similar O-antigen gene cluster (OGC) (the DNA identity ranges from 74% to 83%) as E. coli O118 and O151. It was suggested that the OGCs of the three bacteria studied originated from a common ancestor.     

Structure elucidation of the O-antigen of <Emphasis Type="Italic">Salmonella enterica</Emphasis> O51 and its structural and genetic relation to the O-antigen of <Emphasis Type="Italic">Escherichia coli</Emphasis> O23

The O-polysaccharide (O-antigen) of Salmonella enterica O51 was isolated by mild acid degradation of the lipopolysaccharide and its structure was established using sugar analysis and NMR spectroscopy. The O-antigen of Escherichia coli O23, whose structure was elucidated earlier, possesses a similar structure and differs only in the presence of an additional lateral α-D-Glcp residue at position 6 of the GlcNAc residue in the main chain. Sequencing of the O-antigen gene clusters of S. enterica O51 and E. coli O23 revealed the same genes with a high-level similarity. By comparison with opened gene databases, all genes expected for the synthesis of the common structure of the two O-antigens were assigned functions. It is suggested that the gene clusters of both bacteria originated from a common ancestor, whereas the O-antigen modification in E. coli O23, which, most probably, is induced by prophage genes outside the gene cluster, could be introduced after the species divergence.     

Structure and gene cluster of the O-antigen of Escherichia coli O109; chemical and genetic evidences of the presence of L-RhaN3N derivatives in the O-antigens of E. coli O109 and O119

O-antigen representing the O-polysaccharide chain of the lipopolysaccharide is the most variable constituent on the cell surface of Gram-negative bacteria and a player in their pathogenicity. The O-polysaccharide of Escherichia coli O109 was studied by sugar analysis and nuclear magnetic resonance spectroscopy and found to contain a rarely occurring monosaccharide, 2,3-diacetamido-2,3,6-trideoxy-l-mannose (l-RhaNAc3NAc). The following structure of the tetrasaccharide repeating unit of the O-polysaccharide was established, which is closely related to that of Proteus penneri O66: Ac--4-β-L-RhapNAc3NAc -->4)-α-D-Glcp-(1-->3)-α-L-6dTalp-(1-->3)-β-D-GlcpNAc-(1-->. The O-antigen gene cluster of E. coli O109 was sequenced and all 14 genes found were assigned functions based on their similarity to genes from the available databases. Putative genes for synthesis of l-RhaN3N were found in E. coli O109 and their homologues in E. coli O119, whose O-antigen has been reported earlier to contain 2-acetamido-2,3,6-trideoxy-3-formamido-d-mannose (d-RhaNAc3NFo). Analysis by GLC of the (S)-2-octyl glycosides confirmed that the absolute configuration of RhaN3N in E. coli O119 should be revised from D TO L.     

大肠杆菌O141 O-抗原基因簇的破译及进化分析

对大肠杆菌O141 O-抗原基因簇进行测序,序列全长15601bp,用生物信息学的方法进行序列分析,共发现12个基因：鼠李糖合成酶基因(rmlB,rmlD,rmlA,rmlC)、甘露糖合成酶基因(manB,manC),糖基转移酶基因(orf6,orf7,orf9,orf10)、O-抗原转运酶基因(wzx)和O-抗原聚合酶基因(wzy)。用PCR的方法筛选出了针对大肠杆菌O141的特异基因,可以用于基因芯片或PCR方法对大肠杆菌O141的快速检测。通过对大肠杆菌O141的O-抗原基因簇及甘露糖和鼠李糖合成酶基因的进化分析发现：大肠杆菌O141 O-抗原基因簇是低GC含量的片段,仅O-抗原特异的基因才出现在O-抗原基因簇;并且这些基因可能介导了O-抗原基因簇间的重组及以O141 O-抗原基因簇的形成。     

Structural and genetic characterization of enterohemorrhagic Escherichia coli O145 O antigen and development of an O145 serogroup-specific PCR assay

Enterohemorrhagic Escherichia coli O145 strains are emerging as causes of hemorrhagic colitis and hemolytic uremic syndrome. In this study, we present the structure of the E. coli O145 O antigen and the sequence of its gene cluster. The O145 antigen has repeat units containing three monosaccharide residues: 2-acetamido-2-deoxy-D-glucose (GlcNAc), 2-acetamidoylamino-2,6-dideoxy-L-galactose, and N-acetylneuraminic acid. It is very closely related to Salmonella enterica serovar Touera and S. enterica subsp. arizonae O21 antigen. The E. coli O145 gene cluster is located between the JUMPStart sequence and the gnd gene and consists of 15 open reading frames. Putative genes for the synthesis of the O-antigen constituents, for sugar transferase, and for O-antigen processing were annotated based on sequence similarities and the presence of conserved regions. The putative genes located in the E. coli O145 O-antigen gene cluster accounted for all functions expected for synthesis of the structure. An E. coli O145 serogroup-specific PCR assay based on the genes wzx and wzy was also developed by screening E. coli and Shigella isolates of different serotypes.     

The Escherichia coli O111 and Salmonella enterica O35 gene clusters: gene clusters encoding the same colitose-containing O antigen are highly conserved

O antigen is part of the lipopolysaccharide present in the outer membrane of gram-negative bacteria. Escherichia coli and Salmonella enterica each have many forms of O antigen, but only three are common to the two species. It has been found that, in general, O-antigen genes are of low GC content. This deviation in GC content from that of typical S. enterica or E. coli genes (51%) is thought to indicate that the O-antigen DNA originated in species other than S. enterica or E. coli and was captured by lateral transfer. The O-antigen structure of Salmonella enterica O35 is identical to that of E. coli O111, commonly found in enteropathogenic E. coli strains. This O antigen, which has been shown to be a virulence factor in E. coli, contains colitose, a 3,6-dideoxyhexose found only rarely in the Enterobacteriaceae. Sequencing of the O35-antigen gene cluster of S. enterica serovar Adelaide revealed the same gene order and flanking genes as in E. coli O111. The divergence between corresponding genes of these two gene clusters at the nucleotide level ranges from 21.8 to 11.7%, within the normal range of divergence between S. enterica and E. coli. We conclude that the ancestor of E. coli and S. enterica had an O antigen identical to the O111 and O35 antigens, respectively, of these species and that the gene cluster encoding it has survived in both species.     

Structural and genetic characterization of the O-antigen of Salmonella enterica O56 containing a novel derivative of 4-amino-4,6-dideoxy-d-glucose

Based on the O-antigens (O-polysaccharides), one of the most variable cell constituents, 46 O-serogroups have been recognized in the Kauffmann-White serotyping scheme for Salmonella enterica. In this work, the structure of the O-polysaccharide and the genetic organization of the O-antigen gene cluster of S. enterica O56 were investigated. As judged by sugar and methylation analyses, along with NMR spectroscopic data, the O-polysaccharide has a linear tetrasaccharide O-unit, which consists of one residue each of d-ribofuranose, N-acetyl-d-glucosamine, N-acetyl-d-galactosamine, and a novel sugar derivative, 4-(N-acetyl-l-seryl)amino-4,6-dideoxy-d-glucose (d-Qui4NSerAc). The following structure of the O-polysaccharide was established:→3)-β-d-Quip4NSerAc-(1→3)-β-d-Ribf-(1→4)-α-d-GalpNAc-(1→3)-α-d-GlcpNAc-(1→The O-antigen gene cluster of S. enterica O56 having 12 open reading frames was found between the housekeeping genes galF and gnd. A comparison with databases and using the O-antigen structure data enabled us to ascribe functions to genes for (i) synthesis of d-GalNAc and d-Qui4NSerAc, (ii) sugar transfer, and (iii) O-antigen processing, including genes for O-unit flippase (Wzx) and O-antigen polymerase (Wzy).     

Relationships among the O-Antigen Gene Clusters of Salmonella enterica Groups B, D1, D2, and D3

The O antigen is an important cell wall antigen of gram-negative bacteria, and the genes responsible for its biosynthesis are located in a gene cluster. We have cloned and sequenced the DNA segment unique to the O-antigen gene cluster of Salmonella enterica group D3. This segment includes a novel O-antigen polymerase gene (wzy_D3). The polymerase gives α(1→6) linkages but has no detectable sequence similarity to that of group D2, which confers the same linkage. We find the remnant of a D3-like wzy gene in the O-antigen gene clusters of groups D1 and B and suggest that this is the original wzy gene of these O-antigen gene clusters.     

Structure and characterization of the gene cluster of the O-antigen of <Emphasis Type="Italic">Escherichia coli</Emphasis> O49 containing 4,6-dideoxy-4-[(<Emphasis Type="Italic">S</Emphasis>-3-hydroxybutanoylamino]-D-glucose

An O-polysaccharide was isolated by mild acid degradation of the lipopolysaccharide of enteropathogenic Escherichia coli O49 and studied by sugar analysis along with one- and two-dimensional 1H- and 13C-NMR spectroscopy. The following structure of the linear tetrasaccharide repeating unit of the O-polysaccharide was established: [formula], where D-Qui4N(S3HOBut) stands for 4,6-dideoxy-4-[(S)-3-hydroxybutanoylamino]-D-glucose and O-acetylation of GlcNAc is partial (~30%). To our knowledge, no N-(3-hydroxybutanoyl) derivative of Qui4N has been hitherto found in bacterial polysaccharides. Gene functions of the O-antigen gene cluster of E. coli O49 were assigned by bioinformatics analysis and found to correspond to the O-polysaccharide structure. Two new genes were revealed and suggested to be responsible for synthesis and transfer of the 3-hydroxybutanoyl group.     

Structures of the O-polysaccharides of Salmonella enterica O59 and Escherichia coli O15

The O-polysaccharide of Salmonella enterica O59 was studied using sugar analysis and 2D ¹H and ¹³C NMR spectroscopy, and the following structure of the tetrasaccharide repeating unit was established:→2)-β-d-Galp-(1→3)-α-d-GlcpNAc-(1→4)-α-l-Rhap-(1→3)-β-d-GlcpNAc-(1→Accordingly, the O-antigen gene cluster of S. enterica O59 includes all genes necessary for the synthesis of this O-polysaccharide. Earlier, another structure has been reported for the O-polysaccharide of Salmonella arizonae (S. enterica IIIb) O59, which later was found to be identical to that of Citrobacter (Citrobacter braakii) O35 and, in this work, also to the O-polysaccharide of Escherichia coli O15.