Molecular cloning of P-type ATPases on intracellular membranes of the marine alga Heterosigma akashiwo

Two cDNA clones (HAA13 and HAA1) which include conserved regions of genes of P-type ATPases were isolated from the marine alga Heterosigma akashiwo by a method that included the polymerase chain reaction. The longer cDNA (3286 bp), HAA13, consisted of an open reading frame that encoded a 106 kDa polypeptide of 977 amino acids with several possible transmembrane domains and conserved regions of eukaryotic P-type ATPases. One transmembrane domain had a leucine zipper structure. HAA1 was not a full-length gene (2054 bp) and lacked the 5 region, but it also included the conserved regions and putative transmembrane domains. Antibodies against the polypeptides encoded by HAA13 and HAA1 that have been expressed in Escherichia coli reacted with 100 kDa and 95 kDa polypeptides, respectively, on intracellular membranes of H. akashiwo cells. Immunostaining of H. akashiwo cells revealed that the HAA13 antigen was distributed on membranes around chloroplasts and the HAA1 antigen was located on small vesicles.     

Plastidic type I signal peptidase 1 is a redox‐dependent thylakoidal processing peptidase

Thylakoids are the photosynthetic membranes in chloroplasts and cyanobacteria. The aqueous phase inside the thylakoid known as the thylakoid lumen plays an essential role in the photosynthetic electron transport. The presence and significance of thiol‐disulfide exchange in this compartment have been recognized but remain poorly understood. All proteins found free in the thylakoid lumen and some proteins associated to the thylakoid membrane require an N‐terminal targeting signal, which is removed in the lumen by a membrane‐bound serine protease called thylakoidal processing peptidase (TPP). TPP is homologous to Escherichia coli type I signal peptidase (SPI) called LepB. Genetic data indicate that plastidic SPI 1 (Plsp1) is the main TPP in Arabidopsis thaliana (Arabidopsis) although biochemical evidence had been lacking. Here we demonstrate catalytic activity of bacterially produced Arabidopsis Plsp1. Recombinant Plsp1 showed processing activity against various TPP substrates at a level comparable to that of LepB. Plsp1 and LepB were also similar in the pH optima, sensitivity to arylomycin variants and a preference for the residue at ?3 to the cleavage site within a substrate. Plsp1 orthologs found in angiosperms contain two unique Cys residues located in the lumen. Results of processing assays suggested that these residues were redox active and formation of a disulfide bond between them was necessary for the activity of recombinant Arabidopsis Plsp1. Furthermore, Plsp1 in Arabidopsis and pea thylakoids migrated faster under non‐reducing conditions than under reducing conditions on SDS‐PAGE. These results underpin the notion that Plsp1 is a redox‐dependent signal peptidase in the thylakoid lumen.     

Response of growth and photosynthesis of marine red tide alga Heterosigma akashiwo to iron and iron stress condition

Heterosigma akashiwo, a red tide alga, was grown in Fe-deficient and Fe-replete batch cultures. Cell final yields and the growth rate were limited when Fe was below 10 nM and alleviated with 100 nM Fe. By comparison with the results under Fe-replete conditions, chlorophyll a-specific and cell-specific light saturated net photosynthetic capacity (P_m ^{chl a} and P_m ^cell), dark respiration rate (R_d ^{chl a} and R_d ^cell) and apparent photosynthetic efficiency (^{chl a} and ^cell) decreased proportionately, whereas the cells became light saturated at higher irradiance under Fe stress (Fe-limited conditions).     

Protein import pathways in ‘complex’ chloroplasts derived from secondary endosymbiosis involving a red algal ancestor

Heterokont algae such as diatoms and the raphidophyte Heterosigma akashiwo and peridinin-containing dinoflagellates such as Heterocapsa triquetra originally acquired their chloroplasts via secondary endosymbiosis involving a red algal endosymbiont and a eukaryote host, resulting in complex chloroplasts surrounded by four and three membranes, respectively. The precursors of both heterokont and dinoflagellate chloroplast-targeted proteins are first inserted into the ER with removal of an N-terminal signal peptide, but how they traverse the remaining membranes is unclear. Using a nuclear-encoded thylakoid lumen protein, PsbO, from the heterokont alga Heterosigma akashiwo, the dinoflagellate Heterocapsa triquetra and the red alga Porphyra yezoensis we show that precursors without the ER signal peptide can be imported into pea chloroplasts. In the case of the H. triquetra and Porphyra PsbO, the precursors were processed to their predicted mature size and localized within the thylakoid lumen, using the Sec-dependent pathway. We report for the first time a stromal processing peptidase (SPP) activity from an alga of the red lineage. The enzyme processes the Heterosigma PsbO precursor at a single site and appears to have different substrate and reaction specificities from the plant SPP. In spite of the fact that we could not find convincing homologs of the plant chloroplast import machinery in heterokont (diatom) and red algal genomes, it is clear that these three very different lines of algae use similar mechanisms to import chloroplast precursors.     

Morphology,ultrastructure and taxonomy of the raphidophycean algaHeterosigma akashiwo

Heterosigma akashiwo and its related algae were re-examined by light and electron microscopes using cultured materials including type cultures of bothH. akashiwo andH. inlandica as well as specimens referred to asOlisthodiscus luteus maintained in CCAP and UTEX. All the strains examined were similar to one another in appearance and ultrastructural features. They can be accommodated in a single species,H. akashiwo, which has been invalidly published. In this paper, the genus is validly desribed by providing a Latin diagnosis and designating a type species. Ultrastructural characteristics are also given for the genus.     

Structural and ultrastructure changes show an increase in amoeboid forms in Heterosigma akashiwo (Raphidophyceae), during recovery after nutrient depletion

Heterosigma akashiwo shows remarkable ultrastructural changes during the recovery from a late stationary phase (“aged” culture) induced by nutrient depletion. H. akashiwo cells showed different morphological types in “aged” cultures, with an increase in irregular cells and cell fragments. The irregular cells mostly corresponded to an amoeboid shape of the cell. Many of these cells showed chloroplasts with a homogeneous matrix of medium electron density lacking most thylakoids and condensed nucleus, probably as a result of cyst/resting cells germination. In other cells, we observed nuclear blebbing without chromatin condensation and changes in mitochondrion ultrastructure. Some vegetative cells in active phase (“young” culture) were connected to each other, apparently phagocytizing cytoplasmic fragments and intact chloroplasts in the medium. An explanation for the phenomenon may reside in the need of acquiring organic material after nutrient reduction for a faster recovery. On the basis of our observations, we conclude that some ultrastructural features, normally used to distinguish between different species and strains of Raphidophyceae, may be related to different physiological states and should be used with caution for systematic purposes.     

Electron-opaque annular structure girdling the constricting isthmus of the dividing chloroplasts ofHeterosigma akashiwo (Raphidophyceae, Chromophyta)

Summary The plastokinesis (kinesis of chloroplasts) of a raphidophyte alga,Heterosigma akashiwo, was studied by electron microscopy using rapid freezing and freeze-substitution techniques. The chloroplasts are enveloped by two pairs of tightly appressed double membranes, the inner and the cytoplasmic outer pair. The inner pair constricts to divide in advance of the outer pair. By observation of serial sections an electron-opaque, annular structure (plastid-dividing ring) was observed at the isthmus of constricting chloroplasts, girdling the periplastidal outer surface of the inner pair of the four surrounding membranes. These observations suggest that the mechanisms underlying the constriction of the inner and outer pair may differ from each other. The localization of the annular structure (plastid-dividing ring) suggests that the inner pair of the surrounding membranes may be homologous to the double envelope membranes of the chloroplasts of Chlorophyta and Rhodophyta. In addition these findings provide a new evidence supporting the secondary endosymbiosis hypothesis for the origin of the chloroplasts in chromophyte algae.     

The bifunctional cytochromec reductase/processing peptidase complex from plant mitochondria

Cytochromec reductase from potato has been extensively studied with respect to its catalytic activities, its subunit composition, and the biogenesis of individual subunits. Molecular characterization of all 10 subunits revealed that the high-molecular-weight subunits exhibit striking homologies with the components of the general mitochondrial processing peptidase (MPP) from fungi and mammals. Some of the other subunits show differences in the structure of their targeting signals or in their molecular composition when compared to their counterparts from heterotrophic organisms. The proteolytic activity of MPP was found in the cytochromec reductase complexes from potato, spinach, and wheat, suggesting that the integration of the protease into this respiratory complex is a general feature of higher plants.     

A matrix-located processing peptidase of plant mitochondria

Nuclear-encoded mitochondrial precursor proteins are proteolytically processed inside the mitochondrion after import. The general mitochondrial processing activity in plant mitochondria has been shown to be integrated into the cytochrome bc₁ complex of the respiratory chain. Here we investigate the occurrence of an additional, matrix-located processing activity by incubation of the precursors of the soybean mitochondrial proteins, alternative oxidase, the F_Ad subunit of the ATP synthetase and the tobacco F₁ subunit of the ATP synthase, with the membrane and soluble components of mitochondria isolated from soybean cotyledons and spinach leaves. A matrix-located peptidase specifically processed the precursors to the predicted mature form in a reaction which was sensitive to orthophenanthroline, a characteristic inhibitor of mitochondrial processing peptidase (MPP). The specificity of the matrix peptidase was illustrated by the inhibition of processing of the alternative oxidase precursor in both soybean and spinach matrix extracts upon altering a single amino acid residue in the targeting presequence (-2 Arg to Gly). Additionally, there was no evidence for general proteolysis of precursor proteins incubated with the matrix. The purity of the matrix fractions was ascertained by spectrophotometric and immunological analyses. The results demonstrate that there is a specific processing activity in the matrix of soybean and spinach in addition to the previously well characterized membrane-bound MPP integrated into the cytochrome bc₁ complex of the respiratory chain.     

Cloning and sequence analysis of a signal peptidase I from the thermophilic cyanobacterium Phormidium laminosum

Type I signal peptidases are a widespread family of enzymes which remove the presequences from proteins translocated across cell membranes, including thylakoid and cytoplasmic membranes of cyanobacteria and thylakoid membranes of chloroplasts. We have cloned and sequenced a signal peptidase gene from the thermophilic cyanobacterium Phormidium laminosum which is believed to encode an enzyme common to both membrane systems. The deduced amino acid sequence is 203 residues long and although the overall similarity among signal peptidases is rather low there are a number of identifiable conserved regions present. The P. laminosum enzyme is predicted to have a single transmembrane domain, in contrast to other Gram-negative bacterial sequences, but similar to other type I signal peptidases.     

The stromal processing peptidase activities from Chlamydomonas reinhardtii and Pisum sativum: unexpected similarities in reaction specificity

We have partially purified the stromal processing peptidase from Chlamydomonas reinhardtii and compared the properties of this activity with those of the pea counterpart. Whereas previous studies have suggested that the two enzymes may have significantly different reaction specificities, we find that they are in fact very similar. Both enzymes process precursors of two higher-plant thylakoid lumen proteins, and one C. reinhardtii lumenal protein, to similar intermediate-size forms. However, whereas the algal enzyme processes the precursor of C. reinhardtii Rubisco small subunit to the correct mature size, this precursor is cleaved only to an intermediate size by the pea enzyme. The small subunit precursor from pea appears to be cleaved by both enzymes in a similar manner. In terms of sensitivity to inhibitors, the two activities are notably different; the pea enzyme has previously been shown to be inhibited by several types of heavy-metal chelator, but we have found that none of these compounds affect the algal activity.     

Diurnal appearance,fine structure,and chemical composition of fatty particles inHeterosigma akashiwo (Raphidophyceae)

Summary In cells ofHeterosigma akashiwo cultured under a photoperiod of 1212 LD, one or several fatty particles have appeared, grew in size approximately the second hour of the dark period, diminished in size from the tenth hour of the dark period, and completely disappeared by the seventh hour of the light period. The particles, usually located on the side of the nucleus away from the flagellar bases, were partially surrounded by endoplasmic reticulum, but not bounded by a membrane. Lipids comprised 80% of the isolated particles fraction, proteins only 1%.Triacyl-glycerol occupied 80% of the acyllipids in the lipid fraction. Tetradecanoic, hexadecanoic, and hexadecenoic acids comprised 80% of the total fatty acids composition.     

Alga-lytic activity of Pseudomonas fluorescens against the red tide causing marine alga Heterosigma akashiwo (Raphidophyceae)

A bacterial strain, HAK-13, exhibited strongest activity against Heterosigma akashiwo and was capable of controlling this bloom forming phytoplankton. Based on 16S rDNA sequences and biochemical and morphological characteristics, the strain HAK-13 was determined to be Pseudomonas fluorescens on the basis of 99.9% similarity with reference strains in the DNA databases. The growth of H. akashiwo was strongly suppressed by HAK-13 in all growth phases, with the strongest alga-lytic activity noted against harmful bloom-forming species in the exponential stage (6–22 days). Host range tests showed that HAK-13 also significantly inhibited the growth of Alexandrium tamarense and Cochlodinium polykrikoides but could not destroy Gymnodinium catenatum. P. fluorescens HAK-13 indirectly attacked H. akashiwo by alga-lytic substances that might be located at the compartment of cytoplasmic membrane of the bacterium at a level of 45.86 units/mg of specific activity. The results indicated that P. fluorescens HAK-13 caused cell lysis and death of H. akashiwo, A. tamarense, and C. polykrikoides dramatically and Prorocentrum dentatum slightly. Therefore, P. fluorescens HAK-13 has potential for use as a selective biocontrol of harmful algal blooms.     

The general mitochondrial processing peptidase from wheat is integrated into the cytochrome bc 1-complex of the respiratory chain

The bc ₁-complex (EC 1.10.2.2.) from Triticum aestivum L. was purified by cytochrome-c affinity chromatography and gel filtration using either etiolated seedlings or wheat-germ extract as starting material. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of the isolated enzyme revealed ten bands, which were analysed by immunoblotting and direct amino-acid sequencing. The enzyme from wheat is the first bc ₁-complex that is reported to contain four core proteins (55.5, 55.0, 51.5 and 51.0 kDa). In addition, the wheat bc ₁-complex comprises cytochrome b (35 kDa), cytochrome c ₁ (33 kDa) the Rieske iron-sulphur protein (25 kDa) and three small subunits < 15 kDa. This composition differs from the one reported in fungi, mammals and potato. Partial sequence determination of the large subunits suggests that the 55.5 and 55.0-kDa-proteins represent the -subunit of the general mitochondrial processing peptidase, and the 51.5 and 51.0-kDa proteins the -subunit of this enzyme. The bc ₁-complex from wheat efficiently processes mitochondrial precursor proteins as shown in an in-vitro processing assay. In control experiments the isolated bc ₁-complexes from potato, yeast, Neurospora and beef, all purified by the same isolation procedure, were also tested for processing activity. Only the protein complexes from plants contain the general mitochondrial processing peptidase. The composition of the wheat bc ₁-complex sheds new light on the co-evolution of the processing peptidase and the middle segment of the respiratory chain.Abbreviations MPP mitochondrial processing peptidase We wish to thank Prof. G. Schatz, Biozentrum Basel, Switzerland and Prof. H. Weiss, Universität Düsseldorf, Germany for providing antibodies against the repiratory subunits of the bc ₁-complex from yeast and Neurospora and to H. Mentzel, A. Leisse, R. Breitfeld and B. Hidde for excellent technical assistance. Thanks are also due to Prof. M. Boutry, Université de Louvaine-la-Neuve, Belgium for providing a plasmid containing the -subunit of ATPase from tobacco. This research was supported by the Deutsche Forschungsgemeinschalft and the Bundesministerium für Forschung und Technologie.     

Characterization of the bifunctional mitochondrial processing peptidase (MPP)/bc 1 complex inSpinacia oleracea

The mitochondrial general processing peptidase (MPP) in plant mitochondria constitutes an integral part of the cytochromebc ₁ complex of the respiratory chain. Here we present a characterization of this bifunctional complex from spinach leaf mitochondria. The purified MPP/bc ₁ complex has a molecular mass of 550 kDa, which corresponds to a dimer. Increased ionic strength results in partial dissociation of the dimer as well as loss of the processing activity. Micellar concentrations of nonionic and zwitterionic detergents stimulate the activity by decreasing the temperature optimum of the processing reaction, whereas anionic detergents totally suppress the activity. MPP is a metalloendopeptidase. Interestingly, hemin, a potent regulator of mitochondrial and cytosolic biogenesis and inhibitor of proteosomal degradation, inhibits the processing activity. Measurements of the processing activity at different redox states of thebc ₁ complex show that despite bifunctionality of the MPP/bc ₁ complex, there is no correlation between electron transfer and protein processing.     

Pelagic-benthic transition of the harmful alga, Heterosigma akashiwo: Changes in swimming and implications for benthic cell distributions

Many harmful algal blooming (HAB) species transition between a vegetative, motile phase in the water column and a dormant, non-motile resting phase in the sediments. These life history transitions potentially regulate the timing, location and persistence of bloom events. Motility promotes aggregation and influences vertical distributions in the water column. However, the contribution of this behavior to benthic distributions of resting cells is currently unknown. We used video-tracking techniques to test the hypothesis that algal cells use active down-swimming during pelagic-benthic transition to favorably influence benthic distributions. In an experimental water column, we monitored cell swimming trajectories of Heterosigma akashiwo for 14 days after cells were signaled to enter the benthic resting stage. Using the statistical characteristics of individual cell trajectories, we developed a video-based motion assay to assign each tracked Heterosigma cell to one of three cell states known to occur during pelagic-benthic transition: induced motile, transitional and resting. The primary swimming characteristic influencing benthic distribution, net vertical velocity, was essentially the same for all three cell states. Hence, we found no evidence that active down-swimming influences benthic distributions. Our data suggest that benthic distributions of Heterosigma resting cells are similar to distributions of slowly sedimenting passive particles. These observations suggest that Heterosigma benthic resting cell distributions can be predicted by modeling the effects of cell sedimentation rates combined with geophysical flow patterns.     

Sublethal effects of the toxic alga Heterosigma akashiwo on the southeastern oyster (Crassostrea virginica)

Over the last three years, several blooms of Heterosigma akashiwo (Raphidophyceae) were documented in South Carolina (SC) brackish waters, including areas containing extensive oyster (Crassostrea virginica) beds. This study examined the sublethal effects of H. akashiwo on C. virginica, based on cellular biomarker responses after exposure to laboratory cultures of H. akashiwo isolated from SC waters, and to water collected from two SC H. akashiwo blooms. Exposure to laboratory cultures or blooms of H. akashiwo significantly increased oyster hepatopancreas lysosomal destabilization rates, but had little effect on gill p-glycoprotein (p-gp) expression. Lysosomal destabilization in oysters continued to increase even after a 7-day recovery period in clean seawater, suggesting that H. akashiwo toxin or other cellular byproducts continued to damage the hepatopancreas. These results suggest that even short-term exposures of oysters to high cell densities of H. akashiwo could have long-term adverse physiological effects, and imply that oyster health may be compromised in areas where repetitive H. akashiwo blooms occur.     

A novel Heterosigma akashiwo (Raphidophyceae) bloom extending from a South Carolina bay to offshore waters

In April 2003, a novel Heterosigma akashiwo bloom was observed that extended from Bulls Bay, South Carolina USA, to approximately 8 km offshore. The bloom was associated with a fish kill of approximately 10⁴ fish. The bloom coincided with salinities anomalously low for the region and optimal for H. akashiwo growth. The low salinities were related to the rediversion of freshwater a month earlier from the Cooper River into the Santee River, which partially feeds into Bulls Bay. H. akashiwo identification was confirmed using a species-specific real-time PCR assay modified for the direct amplification of target DNA from the bloom sample. Because this H. akashiwo bloom was associated with a fish kill, and exposure to bloom waters caused sublethal toxic effects on oysters, the resolution of the cause and potential recurrence of the bloom are of importance to fishery management.