Diaspore structure and germination ecophysiology of the babassu palm (Attalea vitrivir)

Both germination and seedling establishment in palm trees are strongly influenced by the morphoanatomy of the fruits, although the interactions of these processes with ecophysiological aspects are not yet well understood. The present work evaluated structural and physiological aspects of seed germination in Attalea vitrivir, a species living under the seasonal climate of the Cerrado (Brazilian savanna) biome. We studied morphology, anatomy and histochemistry of the fruits and seedlings, the effects on germination of the pericarp, of diaspore storage conditions, germination temperature, removal of the operculum, and of gibberellic acid (GA3) application, and characterized the imbibition process of the seeds. Germination depends on a series of complex interactions between structures and physiological processes. The pericarp protects the seed and also causes physical dormancy that, when interacting with the temperature regime, can delay germination until subsequent rainy periods. Some seeds demonstrated non-profound physiological dormancy associated with restricted germination imposed by the operculum. Germination and initial development result from the elongation of the cotyledon cells and are affected by the activities of two distinct meristems in the proximal region of the embryo. The haustorium develops an invaginated secretory epithelium and aerenchyma, and actively participates in seed reserve mobilization. The adaptation of A. vitrivir to the Cerrado environment, with a strongly seasonal climate, is favored by its diaspore structure, by the abundance of endosperm reserves that allow the seedlings to survive for a long period above soil level, and by a seedling development pattern that protects the vegetative axis by deep burial.     

The cohune palm (Orbignya cohune,Arecaceae) in Belize: A survey of uses

Although common throughout Belize in lowland forests and agricultural systems, the cohune palm,Orbignya cohune is relatively little used compared with its historic importance, according to a 1992 survey discussed here. Among uses found to persist are leaves for thatch, fruits for oil, and palm heart as food. Exploitation required only simple technology and was most notable at socio-economic extremes. Areas from which cohunes were exploited rarely coincided with high-density stands of the species. Alternatives exist for all cohune products. It seems unlikely that this palm will be the basis of a large-scale industry in Belize, primarily because of the uncertainty of wild yields and the widespread availability of alternatives.     

Analysis of expressed sequence tags from oil palm (Elaeis guineensis)

This is the first report of a systematic study of genes expressed by means of expressed sequence tag (EST) analysis in oil palm, a species of the Arecales order, a phylogenetically key clade of monocotyledons that is not widely represented in the sequence databases. Five different cDNA libraries were generated from male and female inflorescences, shoot apices and zygotic embryos and unidirectional systematic sequencing was performed. A total of 2411 valid EST sequences were thus obtained. Cluster analysis enabled the identification of 209 groups of related sequences and 1874 singletons. Putative functions were assigned to 1252 of the set of 2083 non-redundant ESTs obtained. The EST database described here is a first step towards gene discovery and cDNA array-based expression analysis in oil palm.     

Microsatellites in palm (Arecaceae) sequences

Microsatellites are the most promising co-dominant markers, widely distributed throughout the genome. Identification of these repeating genomic subsets is a tedious and iterative process making computational approaches highly useful for solving this biological problem. Here 38,083 microsatellites were localized in palm sequences. A total of 2, 97,023 sequences retrieved from public domains were used for this study. The sequences were unstained using the tool Seqclean and consequently clustered using CAP3. SSRs are located in the sequences using the microsatellite search tool, MISA. Repeats were detected in 33,309 sequences and more than one SSR had appeared in 3,943 sequences. In the present study, dinucleotide repeats (49%) were found to be more abundant followed by mononucleotide (30%) and trinucleotide (19%). Also among the dinucleotides, AG/GA/TC/CT motifs (55.8%) are predominantly repeating within the palm sequences. Thus in future this study will lead to the development of specific algorithm for mining SSRs exclusively for palms.     

Potential fitness benefits from mate selection in the Atlantic cod (Gadus morhua)

Little evidence of benefits from female mate choice has been found when males provide no parental care or resources. Yet, good genes models of sexual selection suggest that elaborated male sexual characters are reliable signals of mate quality and that the offspring of males with elaborate sexual ornaments will perform better than those of males with less elaborate ornaments. We used cod (Gadus morhua L.), an externally fertilizing species where males provide nothing but sperm, to examine the potential of optimal mate selection with respect to offspring survival. By applying in vitro fertilizations, we crossed eight females with nine males in all possible combinations and reared each of the 72 sib groups. We found that offspring survival was dependent on which female was mated with which male and that optimal mate selection has the potential to increase mean offspring survival from 31.9 to 55.6% (a 74% increase). However, the size of the male sexual ornaments and sperm quality (i.e. sperm velocity and sperm density) could not predict offspring survival. Thus, even if there may be large fitness benefits of mate selection, we might not yet have identified the male characteristics generating high offspring survival.     

Stem vascular architecture in the rattan palm Calamus (Arecaceae-Calamoideae-Calaminae)

Climbing stems in the rattan genus Calamus can reach lengths of well over 100 m, are long-lived, and yet their vascular tissue is entirely primary. Such a combination suggests that stem vasculature is efficient and resistant to hydraulic disruption. By means of an optical shuttle and video recording of sequential images we analyzed the stem of a cultivated species. The stem has vascular features that are unusual compared with those in arborescent palms and seemingly inefficient in terms of long-distance water transport. Axial bundles are discontinuous basally because leaf traces, when followed downwards, always end blindly below. Furthermore, there is no regular distal branching of each leaf trace at its level of departure into a leaf, so that neither a continuing axial bundle nor bridges to adjacent axial bundles are produced as in the standard palm construction. Instead, the axial bundles in the stem periphery are connected to leaf traces and to each other by narrow and irregular transverse or oblique commissures that are not the developmental homologues of bridges. As in other palms, metaxylem within a leaf trace is not continuous into the leaf so that the only connection to a leaf is via protoxylem. Within the stem, protoxylem (tracheids) and metaxylem (vessels) are never contiguous, unlike in other palms, which suggests that water can only move from metaxylem to protoxylem, and hence into the leaf, across a hydraulic resistance. We suggest that this minimizes cavitation of vessels and/or may be associated with an unknown mechanism that refills embolized vessels. Also, the metaxylem can be significant in stem water storage in the absence of abundant ground parenchyma.     

Chloroplast DNA evolves slowly in the palm family (Arecaceae)

A survey of cpDNA restriction-site variation for 22 species representing five of the six subfamilies of the palm family was conducted. Phylogenetic reconstructions based on the restriction-site data are in general agreement with conventional analyses based on morphological characters. Base-substitution estimates, derived from the restriction-site data, indicate a potential 5-13-fold decrease in substitution rates within the palms relative to rate estimates for annual plant taxa. Approximately 1,000 bp of the rbcL gene (ribulose-1,5-bisphosphate carboxylase, large subunit) were sequenced from species representing two subfamilies of the palms. The complete DNA sequence data are in accord with the restriction-site data and indicate a total rate of nucleotide substitution that is about eightfold lower than that observed for annual plants.     

Microbial degradation of palm (Elaeis guineensis) biodiesel

The kinetics of biodegradation of palm-derived fatty methyl and ethyl esters (Elaeis guineensis biodiesel) by a wild-type aerobic bacterial population was measured at 20 degrees C, as the rate of oxygen uptake by a manometric technique. The methyl and ethyl biodiesels were obtained by potassium-hydroxide catalysed trans-esterification of palm oil, respectively. The bacterial flora included the genera Bacillus, Proteus, Pseudomonas, Citrobacter and Enterobacter. The rate of oxygen uptake for palm biodiesel is similar to the quantity observed in the biodegradation of 1.0 mM solutions of simple substrates such as carbohydrates or amino acids. Palm methyl or ethyl biodiesel is subjected to facile aerobic biodegradation by wild-type bacteria commonly present in natural open environments. This result should lessen any environmental concern for its use as alternative fuel, solvent or lubricant.     

Purification and characterization of soluble peroxidase from oil palm (Elaeis guineensis Jacq) leaf

Soluble peroxidase (POD) from oil palm leaf was purified by (NH(4))(2)SO(4) precipitation, anion exchange chromatography and molecular exclusion chromatography. The purification grade obtained was 429 yielding 54% of the enzyme activity. Electrophoresis of purified enzyme under denatured conditions revealed M(r) of 48+/-2 kDa. It has an optimum pH of 5 and it exhibited very high pH and thermal stabilities. K(m) for guaiacol, ABTS and pyrogallol were 3.96, 1 and 0.84 mM, respectively. Immunocytochemical localization studies showed that soluble POD was mainly located in the vascular bundles and epidermis of leaf.     

Low genetic diversity in the masked palm civet Paguma larvata (Viverridae)

The masked palm civet is distributed through south-east Asia, China and the Himalayas. Because of its potential role in the severe acute respiratory syndrome (SARS) epidemic, it has become important to gather information on this species, and notably to provide a tool to determine the origin of farm and market animals. For this purpose, we studied the genetic variability and the phylogeographic pattern of the masked palm civet Paguma larvata . First, two portions of mitochondrial genes, cytochrome b and the control region, were sequenced for a total of 76 individuals sampled from China, the Indochinese region and the Sundaic region. Results indicated a low genetic variability and suggested a lack of a phylogeographic structure in this species, which do not allow inferring the geographic origin of samples of unknown origin, although it is possible to distinguish individuals from China and the Sundaic region. This low variation is in contrast to the well-marked morphological differentiation between the populations in the Sundaic and Chinese–Indochinese regions. We also used five microsatellite loci to genotype 149 samples from two wild and four farmed populations in China, where the masked palm civet is farmed and where the SARS coronavirus was isolated. These analyses also showed a reduced variability in Chinese civets and showed that farmed populations did not exhibit a lower genetic diversity than wild populations, suggesting frequent introductions of wild individuals into farms.     

Acetylcholinesterase-positive intrapineal neuronal system in the palm squirrel Funambulus pennanti (Wroughton)

A well-developed acetylcholinesterase (AChE)-positive neuronal system could be demonstrated in the pineal organ of the palm squirrel. There are two longitudinal nerve tracts which run all along the margin of the pineal organ from its distal to proximal regions. These nerve tracts are confluent distally. Another short, but deep tract was seen in the middle part of the pineal organ which joins one of these tracts. A large number of AChE-positive neurons whose processes actually form the tracts are present all along the pineal organ. They are distinguished into multipolar and pseudounipolar/unipolar neurons. A few neurons seen outside the nerve tract form a network of nerve fibres among the pinealocytes and also link the main tracts. The nerve tracts appear wavy, irregular and tortuous. A large number of round ring-like bodies seen in close association with neuronal perikarya and nerves may represent the axo-somatic and axo-dendritic contacts.     

Differential gene expression during flowering in the oil palm (Elaeis guineensis)

The technique of mRNA fingerprinting was used to isolate flower-specific cDNAs in the oil palm. Differences in the RNA populations between vegetative tissue (leaf) and inflorescences at various stages of flower development were examined using 18 primer combinations. A total of 16 flower-specific cDNAs were identified, of which 15 were successfully re-amplified. Reverse Northern analysis confirmed that 8 of the 15 cDNAs appeared to truly represent differentially expressed mRNAs in flowering tissues. Northern blot analysis subsequently showed that 5 of the clones are preferentially or exclusively expressed in the flowering tissues of oil palm. Received: 1 October 1998 / Revision received: 27 September 1999 / Accepted: 11 October 1999     

Miocene dispersal drives island radiations in the palm tribe Trachycarpeae (Arecaceae)

The study of three island groups of the palm tribe Trachycarpeae (Arecaceae/Palmae) permits both the analysis of each independent radiation and comparisons across the tribe to address general processes that drive island diversification. Phylogenetic relationships of Trachycarpeae were inferred from three plastid and three low-copy nuclear genes. The incongruent topological position of Brahea in CISP5 was hypothesized to be caused by a gene duplication event and was addressed using uninode coding. The resulting phylogenetic trees were well-resolved and the genera were all highly supported except for Johannesteijsmannia and Serenoa. Divergence time analysis estimated the stem of the tribe to be approximately 86 Ma and the crown to be 38 Ma, indicating that significant extinction may have occurred along this branch. Historical biogeographic analysis suggested that Trachycarpeae are of southern North American, Central American, or Caribbean origin and supports previous hypotheses of a Laurasian origin. The biogeography and disjunctions within the tribe were interpreted with respect to divergence times, the fossil record, and geological factors such as the formation of the Greater Antilles--Aves Ridge, the Bering and the North Atlantic land bridges, tectonic movement in Southeast Asia, climatic shifts between the Eocene and Pliocene, and volcanism in the Pacific basin. In considering the three major island radiations within Trachycarpeae, Miocene dispersal appears to have been the driving force in allopatric speciation and is highlighted here as an emerging pattern across the tree of life.