Distribution,growth, production,and ecological significance of the clam Unio terminalis in Lake Kinneret,Israel

The distribution, body composition, growth rate, and population structure of Unio terminalis were measured at different sites of Lake Kinneret (Israel). Maximum clam density was found on the muddy sand between 0.3–6 m depth. Clams were most abundant in the River Jordan inlet zone, where they showed the highest growth rate. This was probably related to both highest food availability and the highest density of fish hosting Unio glochidia in this area. U. terminalis in Lake Kinneret has a more massive shell and ash content as compared with the European Unio species. The annual P/B ratios of U. terminalis populations at different sites were similar and ranged within 0.17–0.18. The computated filtration capacity and energetic budget permit the assumption that the U. terminalis population plays a substantial role in removal of organic particles from the water in the Kinneret shallow inshore zone (up to 15 m depth), and in nutrient recycling.     

Variation in reef associated assemblages of the Lutjanidae and Lethrinidae at different distances offshore in the central Great Barrier Reef

Synopsis Fish traps were used to quantify the distribution and abundance of the Lutjanidae and Lethrinidae on reefs across the central Great Barrier Reef. The assemblages of fishes on inshore reefs were distinctive from those on midshelf and outershelf reefs. There were significantly fewer individuals of the Lutjanidae and Lethrinidae inshore and all species examined displayed significant cross-shelf changes in abundance. These significant cross shelf changes in abundance were due to an absence or low abundance of individuals of a species at one or more cross shelf locations, with many species present in only one location on the continental shelf. The genera Aprion, Lutjanus, Macolor, Symphorichthys, Symphorus, Gnathodentex, Gymnocranius, Lethrinus and Monotaxis were all characteristic of the shallow shelf waters less than 100 m. In contrast, species of the genera Paracaesio, Pristipomoides and Wattsia were characteristic of the intermediate depths (100–200 m) and the deeper outer reef slope waters in excess of 200 m were characterised by species of the genus Etelis.     

Small‐scale demographic variation in the stoplight parrotfish Sparisoma viride

Age‐based analysis of the stoplight parrotfish Sparisoma viride was used to examine whether observed differences in their abundance and size structure among reefs in a cross‐shelf portion of the upper Florida Keys could be explained by variation in demographic rates. Annual and daily sagittal otolith increments were enumerated for 176 individuals collected from replicates of reefs in two strata, inshore and offshore reefs (2–6 m depth). von Bertalanffy growth functions fitted to size‐at‐age plots for each site were similar between reefs within each stratum (inshore and offshore), but differed between strata. Sparisoma viride on offshore reefs attained greater average standard length (L_S) at age, greater mean asymptotic size and were longer lived than fish from inshore reefs. Fish on inshore reefs attained only half the maximum age observed on offshore reefs (4 v. 8 years, respectively). No terminal phase fish >4 years of age were found on either reef type. Estimates of mortality rates from age‐frequency data of collected fish revealed higher mortality on inshore reefs. Demographic variables obtained in this study were similar to published values for S. viride from Caribbean reefs but differed significantly from published values from reefs at a similar latitude (Bahamas), reflecting high demographic plasticity on both local and regional scales.     

Population ecology and juvenile density hotspots of thornback ray (Raja clavata) around the Shetland Islands,Scotland

Elasmobranchs are facing global decline, and so there is a pressing need for research into their populations to inform effective conservation and management strategies. Little information exists on the population ecology of skate species around the British Isles, presenting an important knowledge gap that this study aimed to reduce. The population ecology of thornback ray (Raja clavata) around the Shetland Islands, Scotland, was investigated in two habitats: inshore (50–150 m deep) and shallow coastal (20–50 m deep), from 2011 to 2022, and 2017 to 2022, respectively. Using trawl survey data from the annual Shetland Inshore Fish Survey, the size composition of R. clavata catches was compared between shallow and inshore habitats across 157 trawl sets, and 885 individuals, over the years 2017–2022. Catch per unit effort (CPUE) of R. clavata was significantly higher in shallow than that in inshore areas (ANOVA, F = 72.52, df = 1, 5, p < 0.001). Size composition also significantly differed between the two habitats (analysis of similarities, R = 0.96, p = 0.002), with R. clavata being smaller in shallow areas and juveniles (<60 cm) occurring more frequently. Spatial distribution maps confirmed density hotspots of juveniles in shallow habitats, with repeated use of certain locations consistent over time. The results of this study provide the first evidence for R. clavata using shallow areas for potential nurseries in Shetland, which can inform the IUCN's Important Shark and Ray Area process. Furthermore, this study provides important new population ecology information for R. clavata around Shetland, which may have important conservation implications and be valuable for informing species and fisheries stock assessments in this region.     

Mitogenomic phylogenetic analyses of Leptogorgia virgulata and Leptogorgia hebes (Anthozoa: Octocorallia) from the Gulf of Mexico provides insight on Gorgoniidae divergence between Pacific and Atlantic lineages

The use of genetics in recent years has brought to light the need to reevaluate the classification of many gorgonian octocorals. This study focuses on two Leptogorgia species—Leptogorgia virgulata and Leptogorgia hebes—from the northwestern Gulf of Mexico (GOM). We target complete mitochondrial genomes and mtMutS sequences, and integrate this data with previous genetic research of gorgonian corals to resolve phylogenetic relationships and estimate divergence times. This study contributes the first complete mitochondrial genomes for L. ptogorgia virgulata and L. hebes. Our resulting phylogenies stress the need to redefine the taxonomy of the genus Leptogorgia in its entirety. The fossil‐calibrated divergence times for Eastern Pacific and Western Atlantic Leptogorgia species based on complete mitochondrial genomes shows that the use of multiple genes results in estimates of more recent speciation events than previous research based on single genes. These more recent divergence times are in agreement with geologic data pertaining to the formation of the Isthmus of Panama.     

Angel sharks (Squatinidae): A review of biological knowledge and exploitation

Angel sharks (Squatina spp.) are distributed in warm temperate to tropical waters around the world. Many species occur in shelf seas and exhibit seasonal inshore–offshore migrations, moving inshore to give birth. Consequently, there can be high spatial overlap of angel shark populations with fisheries and other human activities. Their dorso-ventrally flattened body shape, large size (most species attain >100 cm total length, L_T) and demersal nature means that they may be taken in a variety of demersal fishing gears from birth. Available data indicate that angel sharks typically have a biennial reproductive cycle, with litter sizes generally <20 and the young born at c. 20–30 cm. The biological characteristics of angel sharks render them susceptible to overexploitation, as exemplified by the decline of Squatina squatina from many parts of its former range in the north-east Atlantic and Mediterranean Sea. Currently, half of the 22 recognized extant species of angel shark are classed as Threatened on the International Union for Conservation of Nature (IUCN) Red List (with a further three classified as Data Deficient). Given the biological vulnerability of angel sharks, and that many species are data-limited, the current paper provides a review of available biological information and fisheries data pertaining to this family.     

Nearshore fish habitat utilization and species associations in Lake Opinicon (Ontario,Canada)

Synopsis The bulk of Lake Opinicon fish biomass is concentrated in the physically diverse inshore areas. Quantitative analysis of the community compositions of the various inshore habitat types (weedy inlets, sandy shallows, rock shelf, gravel, etc.) showed that each supported a characteristic assemblage of fishes with a relatively constant species and year class composition. This was maintained throughout the season despite a drop in fish biomass in late summer when there was a progressive movement into the offshore waters.Weedbed areas supported the highest biomass, and greatest species and year class diversity. Thereafter, in declining order of richness, were rocky and sandy areas. A few fish species were restricted to single habitat types, e.g.Notropis heterodon to inshore weedbeds.Lepomis macrochirus, the commonest species in the lake was, by contrast, versatile and occurred in all inshore habitats. Commonly the numbers of a species in a habitat differed between day and night. Significant diel movements between habitats characterized two nocturnal feedersPomoxis nigromaculatus andIctalurus nebulosus.     

Reproductive features and gonad development cycle of the soft bottom-gravel gorgonian Leptogorgia sarmentosa (Esper, 1791) in the NW Mediterranean Sea

Abstract

Leptogorgia sarmentosa (Cnidaria: Octocorallia) is a common soft bottom-gravel gorgonian in the northwestern Mediterranean Sea. This study examined the annual reproductive cycle of a L. sarmentosa. population at a depth of 30 m, and further determined the sex ratio, the intra-colonial gonadal output variability and the age at first reproduction. L. sarmentosa was gonochoric and the population studied was characterized by a sex ratio slightly biased towards female colonies (1 male:1.6 female). Secondary branches had higher polyp fertility (number of gonads per polyp) compared to primary branches, but because of the number of polyps on the former, most of the sexual effort was actually contributed by the primary branches, as in other gorgonian species. Male colonies became fertile above a height of 21 cm, but female colonies had gonads even in the 1–10 cm height class. Spawning occurred between late August and early September, although there was no direct observation of broadcast spawning or surface brooder strategy. The maximum gonad size was 550 μm in males and 500 μm in females, with a mean diameter of 270 μm for spermaries, and 190 μm for eggs. The number of gonads per polyp prior to spawning reached 4–5 spermaries polyp!1 in male colonies, and 3–4 eggs polyp!1 in female colonies. Spawning did not appear to be synchronized with the full moon. L. sarmentosa appeared to have a different reproductive strategy to other Mediterranean gorgonians (living on hard bottom substrata), probably because of its different habitat preferences and biological (morphology, diet, prey capture rates, growth, biochemical levels) features.     

Genetic isolation between coastal and fishery‐impacted,offshore bottlenose dolphin (Tursiops spp.) populations

The identification of species and population boundaries is important in both evolutionary and conservation biology. In recent years, new population genetic and computational methods for estimating population parameters and testing hypotheses in a quantitative manner have emerged. Using a Bayesian framework and a quantitative model‐testing approach, we evaluated the species status and genetic connectedness of bottlenose dolphin (Tursiops spp.) populations off remote northwestern Australia, with a focus on pelagic ‘offshore’ dolphins subject to incidental capture in a trawl fishery. We analysed 71 dolphin samples from three sites beyond the 50 m depth contour (the inshore boundary of the fishery) and up to 170 km offshore, including incidentally caught and free‐ranging individuals associating with trawl vessels, and 273 dolphins sampled at 12 coastal sites inshore of the 50 m depth contour and within 10 km of the coast. Results from 19 nuclear microsatellite markers showed significant population structure between dolphins from within the fishery and coastal sites, but also among dolphins from coastal sites, identifying three coastal populations. Moreover, we found no current or historic gene flow into the offshore population in the region of the fishery, indicating a complete lack of recruitment from coastal sites. Mitochondrial DNA corroborated our findings of genetic isolation between dolphins from the offshore population and coastal sites. Most offshore individuals formed a monophyletic clade with common bottlenose dolphins (T. truncatus), while all 273 individuals sampled coastally formed a well‐supported clade of Indo‐Pacific bottlenose dolphins (T. aduncus). By including a quantitative modelling approach, our study explicitly took evolutionary processes into account for informing the conservation and management of protected species. As such, it may serve as a template for other, similarly inaccessible study populations.     

Intraspecific variation in palatability and defensive chemistry of brown seaweeds: effects on herbivore fitness

When offered a choice between brown seaweeds (Phaeophyta) from shallow inshore populations versus deeper offshore populations along the mid-Atlantic coast of the United States of America, the herbivorous amphipod Ampithoe longimana consistently preferred plants from the inshore populations. This was the case for three species (Dictyota menstrualis, Spatoglossum schroederi, and Sargassum filipendula) collected from each of a single inshore and offshore site, and for one species (D. menstrualis) collected from each of three inshore and three offshore sites. Bioassay-guided fractionation of chemical crude extracts from D. menstrualis suggested that the relative unpalatability of the offshore plants was due to the lipid-soluble secondary metabolites 4beta-hydroxydictyodial A and 18, O-dihydro-4beta-hydroxydictyodial A 18-acetate, along with minor compounds that were not fully identified. The inshore-offshore pattern did not appear to result from induction of defenses due to herbivory by mesograzers, as mesograzer densities were higher on the more palatable inshore plants. Herbivore feeding preferences for inshore versus offshore seaweeds matched the effects of those seaweeds on their fitness. When juvenile amphipods were raised on inshore versus offshore tissues of D. menstrualis, amphipod survivorship, growth, and ovulation were significantly suppressed on the offshore compared to the inshore tissues. Few previous investigations have studied intraspecific variance in seaweed palatability. We extend these by showing that between-population differences in palatability can persist for several years and by demonstrating that this variance is chemically based and has dramatic effects on herbivore fitness.     

Migration and wintering sites of Pelagic Cormorants determined by satellite telemetry

ABSTRACT Factors affecting winter survival may be key determinants of status and population trends of seabirds, but connections between breeding sites and wintering areas of most populations are poorly known. Pelagic Cormorants (Phalacrocorax pelagicus; N= 6) surgically implanted with satellite transmitters migrated from a breeding colony on Middleton Island, northern Gulf of Alaska, to wintering sites in southeast Alaska and northern British Columbia. Winter locations averaged 920 km (range = 600–1190 km) from the breeding site. Migration flights in fall and spring lasted ≤5 d in four instances. After reaching wintering areas, cormorants settled in narrowly circumscribed inshore locations (～10‐km radius) and remained there throughout the nonbreeding period (September– March). Two juveniles tagged at the breeding colony as fledglings remained at their wintering sites for the duration of the tracking interval (14 and 22 mo, respectively). Most cormorants used multiple sites within their winter ranges for roosting and foraging. Band recoveries show that Pelagic Cormorants in southern British Columbia and Washington disperse locally in winter, rather than migrating like the cormorants in our study. Radio‐tagging and monitoring cormorants and other seabirds from known breeding sites are vital for understanding migratory connectivity and improving conservation strategies for local populations.     

Taxonomy, distribution and nesting biology of species of the genus Dolichovespula (Hymenoptera, Vespidae)

The genus Dolichovespula consists provisionally of 18 species. Aerial nest site characteristics have been established for seven species but most of these species show flexibility in their choice of nest sites and two species often nest in shallow subterranean situations. Colony length is usually just over 3 months to approximately 4 months, but at lower latitudes may extend to more than 5 months. Mature colony size is usually approximately 1000 cells with more large cells than small cells. Parasitized colonies have a shorter colony cycle and smaller colonies. During the production of the sexual brood the larva/worker ratio reaches its lowest value of approximately 2.5 larvae per worker. Colonies often have upper mixed combs of small and large cells. Total adult production is usually less than 2000 adults. Colonies of D. arenaria and D. norwegica may specialize in mainly producing males or queens. Variations in mature colony size and production of queens is probably a consequence of the number of workers present, particularly early in the colony cycle.     

Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany,a Crop Wild Relative of celery

• Helosciadium repens (Jacq.) W.D.J. Koch is threatened by genetic erosion. It is a Crop Wild Relative (CWR) of celery and celeriac and a potentially valuable genetic resource for plant breeding. The objective of this study was the analysis of distribution of genetic diversity with a set of selected populations in Germany. The results of the genetic analysis and data obtained during the site visits were used to identify a subset which was chosen to best represent the genetic diversity of H. repens in Germany. The chance of long‐term conservation by securing the identified populations in genetic reserves is distinctly possible.
• Seven hundred and fifteen individuals from 27 sites were assessed using six simple sequence repeat markers. Discriminant analysis of principal components was used to identify six clusters of genetically similar individuals. The complementary compositional genetic differentiation Δj was calculated to designate a subset of populations chosen to best represent the overall genetic diversity. Entry 18R (Δ_18R = 0.2498) represented its pooled remainder the best, while entry 22R (Δ_22R = 0.4902) differed the most from its complement.
• Based on the results of the genetic analysis and information regarding the current conservation status, 14 most appropriate wild populations for potential genetic reserve were identified. The used markers display a low level of genetic variation between the analyzed populations, and a split between Northern and Southern populations was observed.
• CWR species are essential genetic resources for plant breeding and food security. However, 11.5% of the European CWRs are threatened. Therefore, it is of utmost importance to determine their genetic compositions. These insights will provide the fundamental basis for making crucial decisions concerning future conservation strategies for H. repens.

     

Population Structure of Montastraea cavernosa on Shallow versus Mesophotic Reefs in Bermuda

Mesophotic coral reef ecosystems remain largely unexplored with only limited information available on taxonomic composition, abundance and distribution. Yet, mesophotic reefs may serve as potential refugia for shallow-water species and thus understanding biodiversity, ecology and connectivity of deep reef communities is integral for resource management and conservation. The Caribbean coral, Montastraea cavernosa, is considered a depth generalist and is commonly found at mesophotic depths. We surveyed abundance and size-frequency of M. cavernosa populations at six shallow (10m) and six upper mesophotic (45m) sites in Bermuda and found population structure was depth dependent. The mean surface area of colonies at mesophotic sites was significantly smaller than at shallow sites, suggesting that growth rates and maximum colony surface area are limited on mesophotic reefs. Colony density was significantly higher at mesophotic sites, however, resulting in equal contributions to overall percent cover. Size-frequency distributions between shallow and mesophotic sites were also significantly different with populations at mesophotic reefs skewed towards smaller individuals. Overall, the results of this study provide valuable baseline data on population structure, which indicate that the mesophotic reefs of Bermuda support an established population of M. cavernosa.     

Distribution,relative abundance and size composition of the threatened serranid Epinephelus daemelii in New South Wales,Australia

The aim of this study was to undertake baseline surveys on the distribution, relative abundance and total lengths (L_T) of a threatened epinephelid species, black cod Epinephelus daemelii, in New South Wales (NSW), Australia, their westernmost distribution. Diving surveys at 83 sites where E. daemelii were expected to occur were undertaken from 2009 to 2011 using 45 min roving diver counts. Sites were spread through northern NSW, including Lord Howe Island (LHI). Individual fish were measured using stereo‐video, enabling accurate length measurement. Surveys were repeated at a sub‐set of sites to assess temporal variation across days, seasons and years. A total of 117 E. daemelii were recorded during baseline surveys, occurring at 42% of the surveyed sites. Across all surveys, the highest numbers recorded (14–18 individuals at a site) were at the outer Solitary Islands and Fish Rock (Smoky Cape). Fewer E. daemelii were found southwards, but two sites in the Port Stephens–Great Lakes Marine Park had consistent numbers (three to six) over four annual surveys. Only 12 E. daemelii were recorded from eight of the 18 sites at LHI. The numbers observed at re‐surveyed sites were generally stable over years. There were latitudinal and cross‐shelf differences in L_T. Individuals in the north were found to be significantly larger than those further south, and fish offshore were significantly larger than those inshore. The largest measured fish was 135 cm, smaller than the maximum L_T(c. 170 cm) recorded for this species. The smallest fish was 26 cm. Overall, it is considered that the abundance of E. daemelii is low compared to anecdotal data even though they have been protected for c. 30 years in NSW. These findings provide an essential benchmark to assess ongoing status and response to protective management.     

Symbiodinium (Dinophyceae) community patterns in invertebrate hosts from inshore marginal reefs of the southern Great Barrier Reef,Australia

The broad range in physiological variation displayed by Symbiodinium spp. has proven imperative during periods of environmental change and contribute to the survival of their coral host. Characterizing how host and Symbiodinium community assemblages differ across environmentally distinct habitats provides useful information to predict how corals will respond to major environmental change. Despite the extensive characterizations of Symbiodinium diversity found amongst reef cnidarians on the Great Barrier Reef (GBR) substantial biogeographic gaps exist, especially across inshore habitats. Here, we investigate Symbiodinium community patterns in invertebrates from inshore and mid‐shelf reefs on the southern GBR, Australia. Dominant Symbiodinium types were characterized using denaturing gradient gel electrophoresis fingerprinting and sequencing of the ITS2 region of the ribosomal DNA. Twenty one genetically distinct Symbiodinium types including four novel types were identified from 321 reef‐invertebrate samples comprising three sub‐generic clades (A, C, and D). A range of host genera harbored C22a, which is normally rare or absent from inshore or low latitude reefs in the GBR. Multivariate analysis showed that host identity and sea surface temperature best explained the variation in symbiont communities across sites. Patterns of changes in Symbiodinium community assemblage over small geographic distances (100s of kilometers or less) indicate the likelihood that shifts in Symbiodinium distributions and associated host populations, may occur in response to future climate change impacting the GBR.     

The inshore marine fishes of the Vestfold Hills region,Antarctica

Thirteen species of fish have so far been caught in the inshore waters around the Vestfold Hills, including the Rauer Islands, in depths down to approximately 100 m. Species caught depend markedly on the type of fishing gear used, but three species are clearly dominant numerically. Pagothenia bernacchii is most abundant in the shallower (< 20 m deep) weedy and rocky habitats, while Chionodraco hamatus is dominant in the deeper (> 20 m deep) nearshore troughs and further offshore. Pagothenia borchgrevinki occupies the specialized habitat associated with sea ice and close-inshore areas, including fjords and Burton Lake.The species list from the Vestfold Hills area is similar to lists from comparable locations in East Antarctica except for the major difference that C. hamatus has not yet been recorded from such shallow waters at the other locations, while P. bernacchii and P. hansoni are much more abundant in water deeper than 20 m at those sites than at Davis.     

Population genetic structure of the round stingray Urobatis halleri (Elasmobranchii: Rajiformes) in southern California and the Gulf of California

The round stingray, Urobatis halleri, is a viviparous elasmobranch that inhabits inshore, benthic habitats ranging from the western U.S.A. to Panama. The population genetic structure of this species was inferred with seven polymorphic microsatellite loci in samples collected at three sites in coastal southern California, one near Santa Catalina Island, California and one in the eastern Gulf of California. Urobatis halleri is relatively common, but little is known of its movement patterns or population structure. Small F_ST values (?0·0017 to 0·0005) suggested little structure among coastal populations of southern and Baja California. The population sampled at Santa Catalina Island, which is separated by a deep‐water channel from the coastal sites, however, was significantly divergent (large F_ST, 0·0251) from the other populations, suggesting low connectivity with coastal populations. The Santa Catalina Island population also had the lowest allele richness and lowest average heterozygosity, suggesting recent population bottlenecks in size.     

Field biology of Halimeda tuna (Bryopsidales, Chlorophyta) across a depth gradient: comparative growth, survivorship, recruitment, and reproduction

Growth, survivorship, recruitment, and reproduction of Halimeda tuna, a dominant green alga in many reef systems of the Florida Keys, were monitored at a shallow back reef (4–7m) and deep reef slope (15–22 m) on Conch Reef. Despite lower light intensities and similar grazing pressures, amphipod infestations, and epiphyte loads at both sites, the deeper site exhibited significantly higher growth rates in summer months over a 4-year period than found for the shallow population, possibly because of higher nutrient levels at depth and photoinhibition of shallow plants. Sexual reproductive events occurred simultaneously across the entire reef, with up to 5% of the population at both sites developing gametangia. New upright axes formed from zygotes, asexual fragmentation, or vegetative runners. Plants appear to have persistent basal stumps that survive harsh environmental conditions, even if upright, photosynthetic axes are removed. Sexual reproduction and smothering by epiphyte overgrowth are hypothesized to be two causes of death for individuals.     

Fitness consequences of habitat variability,trophic position,and energy allocation across the depth distribution of a coral-reef fish

Environmental clines such as latitude and depth that limit species’ distributions may be associated with gradients in habitat suitability that can affect the fitness of an organism. With the global loss of shallow-water photosynthetic coral reefs, mesophotic coral ecosystems (~30–150 m) may be buffered from some environmental stressors, thereby serving as refuges for a range of organisms including mobile obligate reef dwellers. Yet habitat suitability may be diminished at the depth boundary of photosynthetic coral reefs. We assessed the suitability of coral-reef habitats across the majority of the depth distribution of a common demersal reef fish (Stegastes partitus) ranging from shallow shelf (SS, <10 m) and deep shelf (DS, 20–30 m) habitats in the Florida Keys to mesophotic depths (MP, 60–70 m) at Pulley Ridge on the west Florida Shelf. Diet, behavior, and potential energetic trade-offs differed across study sites, but did not always have a monotonic relationship with depth, suggesting that some drivers of habitat suitability are decoupled from depth and may be linked with geographic location or the local environment. Feeding and diet composition differed among depths with the highest consumption of annelids, lowest ingestion of appendicularians, and the lowest gut fullness in DS habitats where predator densities were highest and fish exhibited risk-averse behavior that may restrict foraging. Fish in MP environments had a broader diet niche, higher trophic position, and higher muscle C:N ratios compared to shallower environments. High C:N ratios suggest increased tissue lipid content in fish in MP habitats that coincided with higher investment in reproduction based on gonado-somatic index. These results suggest that peripheral MP reefs are suitable habitats for demersal reef fish and may be important refuges for organisms common on declining shallow coral reefs.