Study of charcoal adsorption for improving the production of Xylitol from wood hydrolysates

Xylose-containing solutions, obtained from acid prehydrolysis of Eucalyptus wood, were treated with powdered charcoal in order to remove lignin-derived compounds that limit the potential of hydrolysates for making fermentation media. Both the kinetics and equilibrium of adsorption were modelled using equations reported in literature. Charcoal-pretreated hydrolysates were supplemented with nutrients and used for producing xylitol with the yeast Debaryomyces hansenii NRRL Y-7426. The susceptibility to fermentation of culture media made with this procedure was compared with those corresponding to media made from untreated wood hydrolysates or standard xylose solutions. The removal of lignin-derived compounds from hydrolysates was closely related with the efficiency of fermentation.     

烤烟硝酸盐含量与土壤养分的关系

采用多元统计分析方法研究了湖南烤烟叶片硝酸盐、亚硝酸盐含量与土壤养分之间的关系,结果表明：（1）典型相关分析证实烟叶硝酸盐、亚硝酸盐含量与土壤主要含氮养分（土壤全氮、碱解氮、铵态氮）及有机质含量的关系密切,与土壤其他养分含量的相关性较小,反映出在一定范围内,随着土壤含氮养分及有机质含量的增加,烟叶（亚）硝酸盐含量呈现增加的趋势,且土壤含氮养分及有机质含量与烟叶硝酸盐含量关系的密切程度高于与亚硝酸盐含量的相关;（2）根据烟叶硝酸盐、亚硝酸盐含量及其相应的植烟土壤养分（有机质、全氮、碱解氮、铵态氮）含量的大小,通过聚类分析把同一等级的烟叶样品分为高、中、低3类,不同类别相比较,有机质含量越高的土壤,其土壤全氮、碱解氮、铵态氮含量以及相应的烟叶硝酸盐、亚硝酸盐含量也越高,说明土壤有机质的高低,直接影响了土壤氮素的供应状况,进而影响了烟叶硝态氮含量的积累;（3）根据聚类分析结果建立了不同等级烟叶硝酸盐、亚硝酸盐含量高低的判别函数,可作为烟叶硝态氮含量在不同土壤肥力条件下判别归类的参考依据。     

Effect of nutrient supplementation of crude or detoxified concentrated distilled grape marc hemicellulosic hydrolysates on the xylitol production by Debaryomyces hansenii

Biosynthesis of xylitol using the yeast Debaryomyces hansenii NRRL Y-7426 was carried out using distilled grape marc (DGM) hemicellulosic hydrolysates directly concentrated by vacuum evaporation or after detoxification with activated charcoal. The effect of nutrient supplementation with vinasses, corn steep liquor (CSL) or commercial nutrients was explored. Using crude concentrated hemicellulosic hydrolysates, the maximum xylitol concentration, 11.3?g/L, was achieved after 172?hr (Q ( xylitol )?=?0.066?g/L-hr; Y ( xylitol ) (/SC)?=?0.21?g/g); meanwhile, using detoxified concentrated hydrolysates, the concentration increased up to 19.7?g/L after 72?hr (Q ( xylitol )?=?0.274?g/L-hr; Y ( xylitol ) (/SC)?=?0.38?g/g). On the other hand, using crude or detoxified hydrolysates, the xylose-to-xylitol bioconversion was strongly affected by the addition of nutrients, suggesting that these hydrolysates present essential nutrients favouring the growth of D. hansenii.     

Alcohol-based quorum sensing plays a role in adhesion and sliding motility of the yeast Debaryomyces hansenii

The yeast Debaryomyces hansenii was investigated for its production of alcohol-based quorum sensing (QS) molecules including the aromatic alcohols phenylethanol, tyrosol, tryptophol and the aliphatic alcohol farnesol. Debaryomyces hansenii produced phenylethanol and tyrosol, which were primarily detected from the end of exponential phase indicating that they are potential QS molecules in D.?hansenii as previously shown for other yeast species. Yields of phenylethanol and tyrosol produced by D.?hansenii were, however, lower than those produced by Candida albicans and Saccharomyces cerevisiae and varied with growth conditions such as the availability of aromatic amino acids, ammonium sulphate, NaCl, pH and temperature. Tryptophol was only produced in the presence of tryptophane, whereas farnesol in general was not detectable. Especially, the type strain of D.?hansenii (CBS767) had good adhesion and sliding motility abilities, which seemed to be related to a higher hydrophobicity of the cell surface of D.?hansenii (CBS767) rather than the ability to form pseudomycelium. Addition of phenylethanol, tyrosol, tryptophol and farnesol was found to influence both adhesion and sliding motility of D.?hansenii.     

DNA probes specific for the yeast species Debaryomyces hansenii: useful tools for rapid identification

We developed a rapid and sensitive identification method for the halotolerant yeast Debaryomyces hansenii, based on the hybridization of species-specific sequences. These sequences were first identified in a survey of D. hansenii strains by random amplification of polymorphic DNA (RAPD) as giving conserved bands in all isolates tested. Two such conserved RAPD products, termed F01pro and M18pro, were cloned from the type strain CBS 767. The specificity of these probes was assessed by hybridizing them to DNA from various species of yeasts commonly found in cheese. F01pro and M18pro hybridized to the DNA of all D. hansenii var. hansenii tested, but not to DNA of other yeast species including the closely related strain of D. hansenii var. fabryii CBS 789. Hybridization patterns of F01pro and M18pro on digested genomic DNA of D. hansenii indicated that the sequences were repeated in the genome of all D. hansenii var. hansenii tested, and gave distinct polymorphic patterns. The single F01pro probe generated 11 different profiles for 24 strains by restriction fragment length polymorphism, using one restriction enzyme. F01pro represents a new type of repeated element found in fungi, useful for both identification and typing of D. hansenii and, together with M18pro, simplifies the study of this species in complex flora.     

Production of xylitol from raw wood hydrolysates by Debaryomyces hansenii NRRL Y-7426

Xylose solutions were obtained from the hemicellulosic fraction of Eucalyptus globulus by means of sulphuric acid treatments performed under selected operational conditions. The hydrolysates were neutralized, supplemented with nutrients, sterilized and utilised as fermentation media for xylitol production using the yeast Debaryomyces hansenii NRRL Y-7426. Preliminary experiments allowed the adaptation of the strain to the culture media. Further fermentation trials were performed with adapted cells according to an incomplete, factorial design of experiments. Empirical models describing the bioconversion were derived from the experimental results. The effects of three operational variables (nutrient concentration, initial pH and shaking speed) on both xylose consumption and xylitol production rates were described by significant mathematical equations. Additional aspects in relation to the process were also discussed. The authors are grateful to Xunta de Galicia and “Orember” for their financial support to this work; as well as to Ms. Rocío Rodríguez Fontán for her excellent technical assistance.     

Debaryomyces psychrosporus sp. nov., a yeast species from a Venezuelan cave

Three yeast strains, which are phenotypically indistinguishable from Debaryomyces hansenii, were recovered from secondary mineral deposits (stalactites and stromatolites) obtained in the Crystal Eyes Cave, Roraima Tepui Mountain, Venezuela. Analyses of the D1/D2 domains of the LSU rRNA gene as well as the concatenated sequences of the nearly entire SSU rRNA gene, the ITS regions and the D1/D2 domains of the LSU rRNA gene confirmed the placement of these strains in the genus Debaryomyces, but relationship with all valid species of D. hansenii complex was distant. Based on the observed considerable sequence divergence the three strains are proposed as a new species, D. psychrosporus sp. nov., with the type strain NCAIM Y.01972(T) (CBS 11845(T), NRRL Y-48723(T)).     

亚硝酸盐影响Lactobacillus brevis 4903发酵的研究

通过研究可知,亚硝酸盐对Lactobacillusbrevis4903发酵有抑制作用,环境中亚硝酸盐一旦分解掉,这种抑制作用就会被解除。分析其原因:①亚硝酸盐抑制了乳酸菌生长,从而抑制了乳酸发酵;②在发酵初期可能因亚硝酸盐还原酶的作用,使亚硝酸盐酶解生成NH3,NH3中和了乳酸菌生成的酸(H ),从而使环境pH值的下降和酸的积累变得缓慢。     

Coordinate induction of dissimilatory ammonification and fermentative pathways in rhizobia

Dissimilatory ammonification was indicated as the common feature of ten rhizobial strains representing six species and three genera. In the absence of external electron acceptors, all investigated strains were capable of ethanolic fermentation. However, induction of anaerobic nitrite reduction was shown to be coupled with a shift of fermentation towards acetate in all the strains tested. Three metabolic groups could be distinguished with regard to nitrite regulation of ethanolic fermentation. It was shown for Bradyrhizobium sp. strain USDA 3045 that nitrite is the signal for switching between fermentative pathways although both ammonia and acetate excretion could not accelerate until nitrate had been utilized first. In the absence of N oxyanions, ethanol was indicated as the main product of mannitol fermentation, five-fold more abundant than acetate. An inverse composition was found in nitrite-amended cultures, due to a four-fold increase in acetate excretion whereas ethanol was kept at low level. Nitrite-supported fermentation towards acetate has not been previously reported for rhizobia. This benefit of this pathway was a two-fold shorter doubling time on 1% mannitol and 2.5 mM nitrite compared to no-nitrite media variants but also enabled fermentation of the more reduced carbon compound glycerol.     

Debaryomyces hansenii growth in nonsterile seawater ClO2-peptone-containing medium

We found that the marine yeast Debaryomyces hansenii strain C-11 (CIBNOR yeast collection, La Paz, Mexico) is highly tolerant to chlorine dioxide (ClO2), a powerful biocide agent. A direct application of this observation is the fermentation of the yeast in a nonsterile medium with an initial concentration of 0.3 mg/L of ClO2. The disinfectant helps to avoid the growth of unwanted microorganisms while allowing the development of the yeast. Because the concentration of ClO2 decreases during the fermentation, we ascribe to D. hansenii cells a "biocontrol" action that contributes to the collection of a contaminant-free yeast cell biomass.     

我国蜜环菌分类单元间菌索的相互作用

蜜环菌菌索是天麻生长的主要营养来源,而蜜环菌生物种菌索之间可能存在种间相互作用,因此天麻栽培时蜜环菌种的混用可能对天麻的产量产生影响。为揭示我国蜜环菌分类单元间菌索的相互作用,以我国8个蜜环菌分类单元为研究对象,通过研究其共同培养时整体及单侧菌索的生长速率和单位长度内生长尖端个数来研究其菌索间的作用特性。结果表明：两者间相互拮抗的有CBS D-CBS F;仅有一个蜜环菌菌索未受到影响或受到协同作用的有：CBS A-CBS H中的CBS A、CBS F-CBS J中的CBS J、CBS A-CBS F中的CBS A、CBS A-CBS N中的CBS A、CBS F-CBS M中的CBS M、CBS J-CBS M中的CBS M、CBS B-CBS J中的CBS B;组合中两种蜜环菌菌索靠近侧协同生长的有：CBS A-CBS M;组合中对两者靠近的区域具有优势的有：CBS A-CBS B中的CBS B、CBS A-CBS J中的CBS J、CBS B-CBS F中的CBS F、CBS D-CBS H中的CBS H、CBS D-CBS N中的CBS N和CBS F-CBS M中的CBS F。本研究的开展为我国蜜环菌的鉴定、天麻栽培用蜜环菌种的选用提供理论指导。     

Molecular analysis of inorganic nitrogen assimilation in yeasts

Assimilation of nitrate and various other inorganic nitrogen compounds by different yeasts was investigated. Nitrate, nitrite, hydroxylamine, hydrazine, ammonium sulphate, urea and L-asparagine were tested as sole sources of nitrogen for the growth of Candida albicans, C. pelliculosa, Debaryomyces hansenii, Saccharomyces cerevisiae, C. tropicalis, and C. utilis. Ammonium sulphate and L-asparagine supported the growth of all the yeasts tested except D. hansenii while hydroxylamine and hydrazine failed to support the growth of any. Nitrate and nitrite were assimilated only by C. utilis. Nitrate utilization by C. utilis was also accompanied by the enzymatic activities of NAD(P)H: nitrate oxidoreductase (EC 1.6.6.2) and NAD(P)H: nitrite oxidoreductase (EC 1.6.6.4), but not reduced methyl viologen-or FAD-nitrate oxidoreductases (EC 1.7.99.4). It is demonstrated here that nitrate and nitrite reductase activities are responsible for the ability of C. utilis to assimilate primary nitrogen.     

A protein induced by NaCl in suspension cultures ofNicotiana tabacum accumulates in whole plant roots

Summary We have characterized a 26 000 dalton (26 000 D) protein which accumulates inNicotiana tabacum cuspension cells grown in media containing 10–25 g/l NaCl (7, 11, 17). Antibody was prepared against this protein and used to examine protein accumulation in both suspension cells and whole plants. Western blot analysis revealed that the 26 000 D protein also accumulates in suspension cells grown in the absence of NaCl as they approach stationary phase but the accumulation never reaches the level seen in the salt adapted cells. This protein also accumulates after treatment with other agents which lower the water potential, such as PEG and KCl, but no increase is seen after nonosmotic stresses such as heat shock and growth in cadmium chloride. The 26 000 D protein is found not only in whole tobacco plants but also in other members of the Solanaceae that were tested, as well as in alfalfa and green beans. The accumulation of the protein seems to be tissue specific as there is considerably more accumulation in roots than in stems or leaves of greenhouse grown plants. We have been unable to correlate accumlation of the 26 000 D protein with salt in wild tomato species but have demonstrated an increase in the accumulation of this protein with salt stress in hydroponically grown tomato plants. These results lead to speculation as to the role of this protein in responding to lowered water potential in the whole plant.     

<Emphasis Type="Italic">Trichomonascus petasosporus</Emphasis> sp. nov. and <Emphasis Type="Italic">Sympodiomyces indianaensis</Emphasis> sp. nov., two new members of the Saccharomycetales

Two new yeasts are described that were recognized as novel from nucleotide divergence in domains D1/D2 of 26S rDNA. The new species and their type strains are the following: Trichomonascus petasosporus NRRL YB-2092T (CBS 9602T), mating type a, NRRL YB-2093 (CBS 9603), mating type alpha, and Sympodiomyces indianaensis NRRL YB-1950T (CBS 9600T). Phylogenetic analysis placed the two new taxa, which are sister species, in the Sympodiomyces clade near Blastobotrys/Stephanoascus farinosus. Placement of Trichomonascus in the Saccharomycetales resolves the earlier uncertainties surrounding the classification of this morphologically unusual genus.     

减压处理对泡菜乳酸菌及风味物质的影响

以市售苦瓜为原料,研究了减压处理对泡菜自然发酵过程中乳酸菌的数量、总酸、乳酸、多糖及亚硝酸盐含量影响的变化规律。研究表明:减压处理可以促进泡菜发酵过程乳酸菌的增殖及乳酸含量的快速积累,并可以有效地降低泡菜中亚硝酸盐的含量,对泡菜多糖的保留有一定的作用。在0.04MPa(真空度)下,发酵终止时,乳酸菌活菌数仍可达到4.1×10~7个/mL,此时泡菜中的总酸含量为24.79mg/mL,其中乳酸含量为2.33%。     

Nitrite Reductase Activity and Inhibition of H2S Biogenesis by Human Cystathionine ?-Synthase

Nitrite was recognized as a potent vasodilator >130 years and has more recently emerged as an endogenous signaling molecule and modulator of gene expression. Understanding the molecular mechanisms that regulate nitrite metabolism is essential for its use as a potential diagnostic marker as well as therapeutic agent for cardiovascular diseases. In this study, we have identified human cystathionine ß-synthase (CBS) as a new player in nitrite reduction with implications for the nitrite-dependent control of H₂S production. This novel activity of CBS exploits the catalytic property of its unusual heme cofactor to reduce nitrite and generate NO. Evidence for the possible physiological relevance of this reaction is provided by the formation of ferrous-nitrosyl (Fe^II-NO) CBS in the presence of NADPH, the human diflavin methionine synthase reductase (MSR) and nitrite. Formation of Fe^II-NO CBS via its nitrite reductase activity inhibits CBS, providing an avenue for regulating biogenesis of H₂S and cysteine, the limiting reagent for synthesis of glutathione, a major antioxidant. Our results also suggest a possible role for CBS in intracellular NO biogenesis particularly under hypoxic conditions. The participation of a regulatory heme cofactor in CBS in nitrite reduction is unexpected and expands the repertoire of proteins that can liberate NO from the intracellular nitrite pool. Our results reveal a potential molecular mechanism for cross-talk between nitrite, NO and H₂S biology.