中国古人类牙齿尺寸演化特点及东亚直立人的系统地位

对中国境内不同时代人类牙齿测量数据的发析显示,中国古人类牙齿尺寸的总体演化趋势与世界其它地区人类一致,呈缩小变化,其中一个表现特点是中国直立人与早期智人在牙齿尺寸上不差别不大,但作者根据对中国古人类化石形态特征,生存年代等方面的综合分析认为中国直立人在化石形态,生存年代等方面均与智人有明显的不同,取消直立人,将其并入智人意见的证据还是不够充分的,目前仍宜将直立人与智人作为人属内两个不同的种来看待,     

哺乳动物牙釉质碳氧稳定同位素揭示早期人类演化与环境关系

早期人类演化、扩散、技术发展与自然环境的关系一直是学术界关注的前沿与热点.本文梳理了环境变化与早期人类演化关系研究中牙釉质碳氧稳定同位素分析的研究历史、原理以及取样方法,与此同时,介绍了不同学者利用哺乳动物牙釉质碳氧稳定同位素分析在早期人类演化与环境关系探索的相关研究进展,并对东非早期人类奥杜威技术向阿舍利技术转变过程...     

Society and territory in human evolution

A survey of recent data on the socio-territorial organization of primates, carnivores and human hunter-gatheres discloses some striking similarities among them. These common features are integrated into a theory of hominid social evolution. It is postulated that the hominids, throughout most of their evolution, were organized into stable groups with the capacity to disperse into largely independent subgroups that remain affiliated with each other. During the course of hominid evolution, territoriality became an increasingly important function of the larger, stable units. The analysis illustrates the value of combining data from primates, carnivores, and human hunter-gatherers in the reconstruction of early hominid behavior.     

The Evolution of Human Origins

Because humans are the product of our evolutionary past, learning how we evolved is fundamental to all anthropological investigations. We now realize that reconstructing why unique human attributes evolved requires an understanding of our starting point, but this is a relatively recent perspective. One hundred years ago, the question of human origins was identical to that of hominin origins. Accepting Australopithecus into human ancestry, coupled with the modern synthesis of evolution, led anthropologists to consider humans as products of natural selection. They realized that increased intelligence did not initially distinguish our lineage, and that early hominins were apelike in many ways. Australopithecus brought bipedalityr and brain expansion came with Homo . Because the human mind and behavior are products of evolution, we must reconstruct the selective pressures that shaped our lineage in order to understand ourselves today. Paleoanthropology, as with all anthropology, is becoming ever more question oriented, drawing on many areas of inquiry. [Keywords: human origins, human evolution, history, data, theory]     

更新世中期中国古人类演化区域连续性与多样性的化石证据

以往,在东亚大陆发现的更新世中期人类化石被分别归入直立人和古老型智人。这种分类的主要依据是化石形态特征以及年代。魏敦瑞对周口店第一地点人类化石研究描述的一些头骨、下颌骨和牙齿特征通常被作为判定直立人的标准。根据这些化石的年代分布,一般将30万年前的中更新世晚期作为划分直立人与古老型智人的大致年代界限。近20年来,在非洲、欧洲和东亚新发现了一些更新世中期人类化石,目前古人类学界对中国更新世中期人类化石特征及演化有了与以往不同的认识。最近对大荔、许家窑、盘县大洞、许昌、华龙洞等人类化石的研究显示,近30万年以来东亚大陆人类演化呈现复杂的多样性,将这一时期人类全部归入古老型智人难以准确反映更新世中期中国古人类演化模式及规律。本文结合近年中国更新世中期人类演化研究进展,选择部分具有演化及分类价值的形态特征,分析这些特征在更新世中期中国古人类化石的表现特点。在此基础上,对更新世中期中国古人类演化模式做了尝试性探讨。本研究发现,周口店、和县、沂源、南京等中更新世早期人类化石呈现有较多的区域性特征,形态特征表现相对稳定;而大荔、金牛山、许家窑、许昌、华龙洞、马坝、盘县大洞等中更新世晚期人类在化石形态特征表现复杂多样,变异范围大。此外,在这一时期人类化石上发现较多与生存活动、健康、环境适应有关的证据。根据这些发现,作者认为中国中更新世早期组人类演化以形态连续性为主;进入中更新世晚期,中国古人类演化区域性特征减弱,演化模式以多样性为主。一系列新的化石发现和研究证据提示中更新世晚期东亚大陆可能生存有不同的古人类成员。根据目前掌握的化石形态和年代证据,大约30万年前是中国更新世中期演化变化关键时间节点。     

On the Emergence of Biology from Chemistry: A Discontinuist Perspective from the Point of View of Stability and Regulation

In this paper we argue that molecular evolution, and the evolution of prebiotic and early biological systems are qualitatively different processes, in which a crucial role is played respectively by structural stability and by dynamical mechanisms of regulation and integration. These different features entail also distinct modalities of interaction between system and environment that need to be taken into consideration when discussing molecular and biological evolution and selection.     

Phylogenetic history of paralogous gene quartets on human chromosomes 1, 2, 8 and 20 provides no evidence in favor of the vertebrate octoploidy hypothesis

Fourfold paralogy regions in the human genome have been considered historical remnants of whole-genome duplication events predicted to have occurred early in vertebrate evolution. Taking advantage of the well-annotated and high-quality human genomic sequence map as well as the ever-increasing accessibility of large-scale genomic sequence data from a diverse range of animal species, we investigated the prediction that the ancestral vertebrate genome was shaped by two rapid rounds of whole-genome duplication within a period of 10 million years. Both the map self-comparison approach and a phylogenetic analysis revealed that gene families identified as tetralogous on human chromosomes 1/2/8/20 arose by small-scale duplication events that occurred at widely different time points in animal evolution. Furthermore, the data discount the likelihood that tree topologies of the form ((A,B)(C,D)) are best explained by the octoploidy hypothesis. We instead propose that such symmetrical tree patterns are also consistent with local duplications and rearrangement events.     

On the origins of Mendelian disease genes in man: the impact of gene duplication

Over 3,000 human diseases are known to be linked to heritable genetic variation, mapping to over 1,700 unique genes. Dating of the evolutionary age of these disease-associated genes has suggested that they have a tendency to be ancient, specifically coming into existence with early metazoa. The approach taken by past studies, however, assumes that the age of a disease is the same as the age of its common ancestor, ignoring the fundamental contribution of duplication events in the evolution of new genes and function. Here, we date both the common ancestor and the duplication history of known human disease-associated genes. We find that the majority of disease genes (80%) are genes that have been duplicated in their evolutionary history. Periods for which there are more disease-associated genes, for example, at the origins of bony vertebrates, are explained by the emergence of more genes at that time, and the majority of these are duplicates inferred to have arisen by whole-genome duplication. These relationships are similar for different disease types and the disease-associated gene's cellular function. This indicates that the emergence of duplication-associated diseases has been ongoing and approximately constant (relative to the retention of duplicate genes) throughout the evolution of life. This continued until approximately 390 Ma from which time relatively fewer novel genes came into existence on the human lineage, let alone disease genes. For single-copy genes associated with disease, we find that the numbers of disease genes decreases with recency. For the majority of duplicates, the disease-associated mutation is associated with just one of the duplicate copies. A universal explanation for heritable disease is, thus, that it is merely a by-product of the evolutionary process; the evolution of new genes (de novo or by duplication) results in the potential for new diseases to emerge.     

Delineating the longitudinal tumor evolution using organoid models

Cancer is an evolutionary process fueled by genetic or epigenetic alterations in the genome. Understanding the evolutionary dynamics that are operative at different stages of tumor progression might inform effective strategies in early detection, diagnosis, and treatment of cancer. However, our understanding on the dynamics of tumor evolution through time is very limited since it is usually impossible to sample patient tumors repeatedly. The recent advances in in vitro 3D organoid culture technologies have opened new avenues for the development of more realistic human cancer models that mimic many in vivo biological characteristics in human tumors. Here, we review recent progresses and challenges in cancer genomic evolution studies and advantages of using tumor organoids to study cancer evolution. We propose to establish an experimental evolution model based on continuous passages of patient-derived organoids and longitudinal sampling to study clonal dynamics and evolutionary patterns over time. Development and integration of population genetic theories and computational models into time-course genomic data in tumor organoids will help to pinpoint the key cellular mechanisms underlying cancer evolutionary dynamics, thus providing novel insights on therapeutic strategies for highly dynamic and heterogeneous tumors.     

Endocranial volumes of early African hominids, and the role of the brain in human mosaic evolution

Volumetric data are presented for 16 of the early hominids from both South and East Africa. Although the sample sizes are small, the statistical data support the conclusion that at least three taxa are represented; Australopithecus africanus, A. robustus, and Homo habilis. These data, plus certain morphological attributes, indicate that the brains of early hominids were reorganized to a human pattern, regardless of their small endocranial capacities. Some speculative suggestions are made regarding the possible relationship between brain and body weights, as well as Stephan's (1972) “progression indices”. If the speculations are correct, they provide additional support for the idea that brain reorganization occurred early in human evolution, and that concepts which regard the brain as having a more terminal role in human mosaic evolution are incorrect, as all of the fossil encephalization or “progression indices” are in the range of modern Homo sapiens.     

Get Rad! The Evolution of the Skateboard Deck

Today there is growing interest in material culture studies among a wide range of social and biological scientists. Researchers recognize that some concepts drawn from biology can be useful in understanding aspects of material culture evolution. Indeed, recent research has demonstrated that material culture can evolve in a branching manner (vertical transmission) similar to that of biological species. However, there are many complicating factors as well, particularly the human penchant for borrowing and resurrecting old ideas resulting in extensive blending and hybridization (lateral transmission). But blending and hybridization occurs in biology as well depending upon the nature and scale of interacting organisms. There is far more lateral information transfer between populations within species than between species (although there are always exceptions). History can also be expected to play a role in the degree to which evolution is affected by vertical versus lateral transmission processes. All things equal, we should expect branching to be most important early in the history of a cultural system since blending could not become significant without the early development of distinct lineages. This is different from most biological systems in the sense that the development of distinct lineages would significantly reduce (or prevent) opportunities for blending. We explore these ideas with an analysis of skateboard decks spanning the history of professional skateboards since 1963. We apply cladistic and networking models in order to develop an understanding of the degree by which skateboard evolution was affected by branching and blending/hybridization processes. The study is enhanced by a historical record that provides significant insight into the actual innovation and borrowing processes associated with skateboard evolution. Results confirm that both branching and blending played important roles and that branching was most critical early in professional skateboard history. The study offers the important implication that while cultural systems will typically incorporate far more horizontal transmission in the evolutionary process (particularly in later stages) than many biological systems, general principles governing early stage branching and disparity may apply to both.     

20世纪的中国人类古生物学研究与展望

本文回顾中国人类古生物学在20世纪的主要研究进展。中国的化石曾经数度入围最早期的人类。目前中国已有60余处地点发现了人类化石, 其中最古老的暂时要推云南元谋上那蚌的两颗门齿。对中国人类化石的研究提出了连续进化附带杂交的模式, 支持现代人起源的多地区进化说。中国各时期的化石人类有较显著的地区差异。中国人类的发展可能比喻为既有分支间的杂交融合, 又有小分支的绝灭和局部替代的河网状。     

现代中国人群形成与分化的形态证据——亚洲与非洲现代人群上颌第一臼齿齿尖相对面积的对比分析

现代人群形成与分化造成的具有地域差别的人群标志性体质特征是研究人群之间关系的重要信息。作为臼齿形态测量的组成部分,上颌第一臼齿齿尖相对面积在人类演化以及现代人群关系上的研究价值已经引起了人类学界的关注。然而,迄今对上颌第一臼齿齿尖相对面积在世界各地的现代人群之间是否具有地域性差异还不是很清楚。本文对代表亚洲和非洲现代人群的208枚上颌第一臼齿齿尖相对面积的研究发现,上颌第一臼齿四个主要齿尖相对面积在亚洲和非洲现代人群之间都存在明显差异。亚洲现代人上颌第一臼齿近中齿尖(原尖和前尖)相对面积较大,而远中齿尖(后尖和次尖)相对面积较小。非洲现代人上颌第一臼齿各齿尖相对面积均较亚洲人群具有更大的变异,尤其在原尖和次尖相对面积上。采用判别分析可以将69.2%的标本正确地判别归入其原来所属的组群。通过与化石人类相关数据的对比发现,非洲现代人比亚洲现代人在原尖和次尖相对面积以及前尖/后尖相对面积比例上更加接近于人类演化的早期形式。现有的证据显示,亚洲和非洲现代人群在齿尖相对面积的分化至少可以追溯到全新世早期,更加精确的分化时间需要结合更新世晚期甚至中期化石人类数据去获得。本研究揭示出的非洲现代人上颌第一臼齿齿尖相对面积的高异质性(heterogeneity)和相对原始性在现代人形成与分化方面的作用尚需进一步的研究。     

Generation and characterization of a transgenic mouse with a functional human TSPY

To generate an animal model that is suitable for the analysis of regulation and expression of human testis-specific protein, Y-encoded TSPY, a transgenic mouse line, TgTSPY9, harboring a complete structural human TSPY gene was generated. Fluorescence in situ hybridization and Southern analyses show that approximately 50 copies of the human TSPY transgene are integrated at a single chromosomal site that maps to the distal long arm of the Y chromosome. The transgene is correctly transcribed and spliced according to the human pattern and is mainly expressed in testicular tissue, with spermatogonia and early primary spermatocytes (leptotene and zygotene) as expressing germ cells. TSPY transgenic mice are phenotypically normal, and spermatogenesis is neither impaired nor enhanced by the human transgene. The present study shows that a human TSPY gene integrated into the mouse genome follows the human expression pattern although murine tspy had lost its function in rodent evolution millions of years ago.     

Evolution of mammalian genome organization inferred from comparative gene mapping

Comparative genome analyses, including chromosome painting in over 40 diverse mammalian species, ordered gene maps from several representatives of different mammalian and vertebrate orders, and large-scale sequencing of the human and mouse genomes are beginning to provide insight into the rates and patterns of chromosomal evolution on a whole-genome scale, as well as into the forces that have sculpted the genomes of extant mammalian species.     

Mixed evidence for early bursts of morphological evolution in extant clades

Macroevolutionary theory predicts high rates of evolution should occur early in a clade's history as species exploit ecological opportunity. Evidence from the fossil record has shown a high prevalence of early bursts in morphological evolution, but recent work has provided little evidence for early high rates in the evolution of extant clades. Here, I test the prevalence of early bursts in extant data using phylogenetic comparative methods. Existing models are extended to allow a shift from a background Brownian motion (BM) process to an early burst process within subclades of phylogenies, rather than an early burst being applied to an entire phylogenetic tree. This nested early burst model is compared to other modes of evolution that can occur within subclades, such as evolution with a constraint (Ornstein‐Uhlenbeck model) and nested BM rate shift models. These relaxed models are validated using simulations and then are applied to body size evolution of three major clades of amniotes (mammals, squamates and aves) at different levels of taxonomic organization (order, family). Applying these unconstrained models greatly increases the support for early bursts within nested subclades, and so early bursts are the most common model of evolution when only one shift is analysed. However, the relative fit of early burst models is worse than models that allow for multiple shifts of the BM or OU process. No single‐shift or homogenous model is superior to models of multiple shifts in BM or OU evolution, but the patterns shown by these multirate models are generally congruent with patterns expected from early bursts.