The status of the West African fish Gobius nigricinctus with reference to New World autochthones and an Old World colour-analogue

The systematic features of a small West African marine gobiid fish, Gobius nigricinctus Delais 1951, are redescribed from the holotype with special emphasis on the head lateral-line canal and sensory papillae (tree neuromast) systems. A junior synonym is found to be Gobius lepidogenys Robins 1970. The status of G. nigricinctus is best expressed in a new monotypic genus, Gorogobius , with closest affinity to the Atlantic-Mediterranean Corcyrogobius and Odondebuenia , Similarities in head sensory papillae arrangement exist between Gorogobius and certain 'seven-spined' genera of the New World tropical insular fauna, but G. nigricinctus is shown not to be a recent transatlantic immigrant. The validity of the tribe Gobiosomini as a natural grouping endemic to the Americas is questioned. Close resemblance in striped coloration between Gorogobius and small Indo-West Pacific gobies, especially Quisquilius eugenius , is shown to be the result of convergent evolution.     

Scanning electron microscopy of fruits in the West African Polygonaceae

The fruit morphology of 18 taxa representing seven genera of the family Polygonaceae in West Africa was investigated using scanning electron microscopy. The achenes are trigonous, lenticular, globose, subglobose,heart shaped, ovoid, or cone like. Sizes range from 0.12 × 0.10 cm2 in Polygonum plebeium to 7.87 × 0.58 cm2 in Afrobrunnichia erecta. Colors are brown to black. The cells are isodiametric in P. plebeium, irregular in A. erecta,Antigonon leptopus, and Harpagocarpus snowdenii, and polygonal in other species. The walls are straight, curved,or undulate and are either raised or depressed. Afrobrunnichia erecta is characterized by deeply sinuate lateral walls. The cell surface may be smooth or tuberculate or fibrillate in the family, usually covered with wax deposits.The combination of these characters is mainly taxonomically useful at the tribal level and rarely at the specific or inffaspecific level for the delimitation of the taxa.     

Multiplex 16S rRNA haplotype-specific PCR, a rapid and convenient method for fish species identification: an application to West African Clupeiform larvae

A multiplex haplotype-specific polymerase chain reaction (MHS-PCR) method was developed, which identified seven Clupeiform species living in the tropical Eastern Atlantic region: Sardinella aurita, Sardinella maderensis, Ethmalosa fimbriata, Sardina pilchardus, Engraulis encrasicholus, Pellonula leonensis and Ilisha africana. 16S rRNA fragments were amplified using a species-specific set of primers, yielding species-specific size fragments, and then separated using agarose gel electrophoresis, enabling direct visual identification of targeted species. This method provides an accurate, easy and rapid tool for identifying species within large Clupeiform samples. It is suitable for investigations on early Clupeiform stages, species and identification in fishery management in the tropical Eastern Atlantic area.     

Influence of lactic cultures on the quality attributes of tsire,a West African stick meat

Tsire is a popular, traditionally processed West African stick meat. Two lactic acid bacteria (LAB), Pediococcus acidi-lactici and Lactobacillus plantarum were used to inoculate pieces of fresh beef before (TA) and after (TB) grilling followed by incubation at 30 °C for 24 h. TA and TB tsire samples had the lowest coliform count (expressed as log c.f.u./g) of 13.48 and 8.83, Staphylococcus count of 7.90 and 5.76, Pseudomonas count of 10.06 and 5.99 on day 6 of storage period respectively. There was an increase in the population of the inoculated LAB in the TA and TB samples to 10.93 and 12.41 respectively. However, the uninoculated samples (TU) had a relatively high coliform, Staphylococcus and Pseudomonas counts. Biochemical analysis of the tsire products showed the TB samples having the highest crude protein (26.43%), thiobarbituric acid (0.25 mg malonaldehyde/kg) and free fatty acid (0.45 mg KOH/g lipid) values. Polyvinyl chloride was found to be the most suitable packaging material for the products during storage, compared with aluminium foil and newsprint. Organoleptic evaluation of the tsire samples also revealed that the TB samples were rated higher in terms of texture, appearance and flavour, while the uninoculated samples had the lowest scores.     

The systematic relationships of the snake genus Anomochilus

Phylogenetic analysis of 38 skeletal characters, 12 muscular characters and 15 visceral characters in 17 major snake clades plus Anomochilus suggests that Anomochilus is the sister taxon of all other living alethinophidian snakes. However, skeletal, muscular and visceral character sets analysed separately or in pairs give four groups of nonconcordant tree topologies. Based on the cladogram derived from the total evidence, two families are erected to prevent the existing family Uropeltidae from becoming paraphyletic: Anomochilidae, for the Malaysian and Indonesian genus Anomochilus , and Cylindrophiidae, for the Sri Lankan, Southeast Asian and Indonesian genus Cylindrophis and the Upper Eocene fossil Eoanilius.     

The tropical history and future of the Mediterranean biota and the West African enigma

Aim Since the opening of the Suez Canal in 1869, many tropical taxa from the Indo‐West Pacific (IWP) realm have entered the Mediterranean Sea, which is experiencing rising temperatures. My aims are: (1) to compare biogeographically this tropical transformation of the Mediterranean biota with the tropical faunas of the Mediterranean and adjacent southern European and West African seas during the Late Oligocene to Pliocene interval; (2) to infer the relative contributions of the tropical eastern Atlantic and IWP to the tropical component of the marine biota in southern Europe; and (3) to understand why West Africa is not now a major source of warm‐water species. Location Southern Europe, including the Mediterranean Sea, and the coast of tropical West Africa. Methods I surveyed the literature on fossil and living shell‐bearing molluscs to infer the sources and fates of tropical subgenus‐level taxa living in southern Europe and West Africa during the Late Oligocene to Pliocene interval. Results Ninety‐four taxa disappeared from the tropical eastern Atlantic (including the Mediterranean) but persisted elsewhere in the tropics, mainly in the IWP (81 taxa, 86%) and to a lesser extent in tropical America (36 taxa, 38%). Nine taxa inferred to have arrived in the tropical eastern Atlantic from the west after the Pliocene did not enter the Mediterranean. The modern West African fauna is today isolated from that of other parts of the marine tropics. Main conclusions Taxa now entering the Mediterranean through the Suez Canal are re‐establishing a link with the IWP that last existed 16 million years ago. This IWP element, which evolved under oligotrophic conditions and under a regime of intense anti‐predatory selection, will continue to expand in the increasingly warm and increasingly oligotrophic Mediterranean. The IWP source fauna contrasts with the tropical West African biota, which evolved under productive conditions and in a regime of less anti‐predatory specialization. Until now, the post‐Pliocene West African source area has been isolated from the Mediterranean by cold upwelling. If further warming should reduce this barrier, as occurred during the productive and warm Early Pliocene, the Mediterranean could become a meeting place for two tropical faunas of contrasting source conditions.     

兽脚类恐龙长掌义县龙的系统发育位置(英文)

长掌义县龙(Yixianosaurus longimanus)是发现于中国辽西下白垩统的一种小型兽脚类恐龙。最初的研究认为它代表一种进步的手盗龙类,但最近的一项研究工作质疑了这一系统发育假说,新的系统发育研究认为长掌义县龙代表一种原始的手盗龙类。鉴于长掌义县龙的系统位置会影响我们对兽脚类前肢和羽毛演化等关键问题的理解,因此需要评估哪一个系统发育假说更为可靠。本文评述了长掌义县龙所有可被用于系统发育研究的形态学特征,证明了这一小型兽脚类恐龙属于基干副鸟类,并很可能属于基干恐爪龙类。这一结论与最初的研究结果相吻合。这一系统位置也与长掌义县龙可能具片状羽毛相吻合,并且否定了手盗龙类前肢演化历史复杂的假说。     

Patterns of seasonal and yearly mass variation in West African tropical savannah birds

Birds in the northern hemisphere usually increase mass reserves in response to seasonal low temperatures and shorter day length that increase foraging unpredictability and so starvation risk. In the lowland tropics, relatively low temperatures and short day lengths are absent and so the risk of starvation may be reduced, leading to much smaller seasonal effects on mass. Nevertheless, other factors such as high temperatures and water and food availability may vary greatly between tropical wet and dry seasons, leading to variable starvation risk and seasonal mass effects. Using data collected from 47 species of birds caught over a 10‐year period in a tropical savannah region in West Africa we tested for seasonal variation in mass in response to a predictable, strongly seasonal tropical climate. Many species (91%) showed seasonal variation in mass, and this was often in a clear annual pattern that was constant across the years. Many species (89%) varied their mass in response to seasonally predictable rainfall. Annual variation in mass was also important (45% of species). Relatively few species (13%) had a seasonal pattern of mass variation that varied between years. Feeding guild or migratory status was not found to affect seasonal or annual mass variation. Seasonal mass change was on average 8.1% across the 21 species with a very large sample size and was comparable with both northern and southern temperate species. Our study showed that biologically significant consistent seasonal mass variation is common in tropical savannah bird species, and this is most likely in response to changing resource availability brought about by seasonal rainfall and the interrupted foraging response due to the constraints of breeding.     

Analysis of mitochondrial DNA diversity in Burkina Faso populations confirms the maternal genetic homogeneity of the West African goat

To date, no comprehensive study has been performed on mitochondrial genetic diversity of the West African goat. Here, we analysed a 481-bp fragment of the HVI region of 111 goats representing four native West African populations, namely the three main Burkina Faso breeds, zoo-farm kept Dwarf goats and endangered Spanish goat breeds used as the outgroup. Analyses gave 83 different haplotypes with 102 variable sites. Most haplotypes (65) were unique. Only three haplotypes were shared between populations. Haplotypes were assigned to cluster A except for H45 (belonging to the Spanish Bermeya goat) which was assigned to cluster C. amova analysis showed that divergence between groups (Φ_CT) was not statistically significant regardless of whether the partition in two hierarchical levels that was fitted included Spanish samples or not. The West African goat scenario shown here is consistent with that previously reported for the species: haplogroup A is predominant and has a very high haplotype diversity regardless of the geographic area or sampled breed. The large phenotypic differences observable between the West African Dwarf and Sahelian long-legged goat populations are not detectable with mitochondrial markers. Moreover, a previously suggested introgression of Sahelian goat southwards because of desertification could not be assessed using mtDNA information.     

Establishment of a General Medicine Residency Training Program in Rural West Africa

Ghana, a developing country in West Africa, has major medical burdens in taking care of a large population with limited resources. Its three medical schools produce more than 200 graduates per year, but most emigrate to developed lands after training. Ghana is working to educate and retain locally trained physicians, but it is difficult to get them to work in rural settings where the need is greatest. This article details the establishment of a General Medicine residency at a 150-bed hospital in rural Ghana. Early training comprises 6 months each in Medicine, Surgery, OB/GYN, and Pediatrics; the hospital in Techiman also has a Surgery residency. House officers choose the program for more hands-on experience than they can get in larger centers. They perform many tasks, including surgery, sooner and more independently than do residents in developed countries. The training program includes a morning report, clinical teaching rounds, and rotations on in-patient wards and in the Emergency Department and clinics. Teaching focuses on history, physical examination, good communication, and proper follow-up, with rigorous training in the OR and some clinical research projects pertinent to Ghana. Trainees work hard and learn from one another, from a dedicated faculty, and by evaluating and treating very sick patients. Ghana’s rural residencies offer rigorous and attractive training, but it is too soon to tell whether this will help stem the “brain drain” of young physicians out of West Africa.     

It's a Wonderful Hypogean Life: A Guide to the Troglomorphic Fishes of the World

There are at least 86 species of troglomorphic fishes belonging to 18 families. Some of those families are characterized by features that can be labeled as preadaptations to the hypogean life; others are not. The level of structural reduction in eye development and pigmentation is highly variable, even within some populations. Reduction in number and complexity of scales does occur but has yet to be fully documented. Reduction in the size and structure of the swim(gas)bladder may be another troglomorphic feature. There is considerable doubt on the taxonomic position of many species of troglomorphic fishes given that a number of them have been described solely on the basis of morphology while genetically they may be very closely correlated to genera different from those they have been assigned to. Geographically speaking there are no evident patterns since many of those species are not found in karstic areas but in phreatic waters. These fishes represent an excellent example of convergent evolution.     

Comparison of stable-carbon isotope composition in the growth rings of Isorberlinia doka, Daniella oliveri, and Tamarindus indica and West African climate

Inter-ring variations in stable-carbon isotope composition of cellulose in Daniella oliveri, Isoberlinia doka, and Tamarindus indica stumps were analyzed for nine trees in the Soudan-Sahel zone of West Africa. This pioneer isotopic study is a contribution to on-going efforts to evaluate the feasibility of extracting proxy climatic records from tree-rings in this area. Our aim is to investigate trends in individual floating δ¹³C time series to assess if patterns in variability within and between rings are consistent with those in other climatically sensitive tree-ring δ¹³C series. Samples were collected primarily from tree stumps but kill dates were unknown. Tree age was estimated from stump condition and shoot regrowth. This approach, combined with low sample replication, hindered the establishment of absolute dates. Nevertheless, δ¹³C and discrimination (Δ¹³C), absolute values and variability in the time series are similar to those often seen in tree-rings. Average δ¹³C values for individual series range from −25.90‰ to −23.72‰ and average Δ¹³C values from 16.56‰ to 18.99‰. It is well known that seasonal rainfall is inversely related to the δ¹³C in growth-season-dry environments and positively covaries with Δ. We investigate the possibility of using this relationship to temporally anchor the time series and to identify missing and false rings in wood segments with indistinct growth. The variability in these time series is consistent with expected patterns and shows promise for facilitating the development of stable carbon isotope tree-ring chronologies for West Africa.     

A new contribution to the Holocene vegetation history of the West African Sahel: pollen from Oursi,Burkina Faso and charcoal from three sites in northeast Nigeria

A pollen diagram from Oursi in Burkina Faso is compared with anthracological (charcoal analysis) results from three sites in northeast Nigeria (Konduga, Gajiganna, Lantewa). The present-day vegetation at all four sites is Sahelian or Sahelo-Sudanian and under heavy human impact. At Oursi, a closed grassland with only few trees and almost no Sudanian elements can be reconstructed for the middle Holocene. At the Nigerian sites, on the other hand, Sudanian woody plants were present during this period. We assume that the Sahel was not a uniform zone during the middle Holocene but rather a mosaic of different vegetation types according to local site conditions. In the light of these results, a simple model of latitudinally shifting vegetation zones is not applicable. Around 3000 B.P. the closed grassland at Oursi was opened by agro-pastoral activities, and at Gajiganna, plants characteristic of pasture lands can be directly related with the presence of cattle. Human impact seems to have been the dominant factor in the vegetation history of the Sahel from 3000 B.P. until today, masking possible effects of climatic change.     

Biomass and production estimates of a fish community in a small South African estuary

The fish community of the small (17·5 ha) intermittently open East Kleinemonde estuary was sampled between 1994 and 1997 to estimate population size, standing stock, growth and productivity. The estuarine-spawning species were numerically more abundant ( n c . 750 000) but due to their small size contributed only 11·7% to the total biomass. The total annual productivity of all fishes in the estuary ( n c . 890 000), with a standing stock of 28·44 g m ⁻², was calculated at 55·89 g m⁻² year⁻¹. The small sparid Rhabdosargus holubi with a production estimate of 41·35 g m⁻² year⁻¹ accounted for <74% of the total fish production in this estuary.     

Density, survival and dispersal of Anopheles gambiae complex mosquitoes in a West African Sudan savanna village

Abstract. To obtain information on adult populations of Afrotropical malaria vector mosquitoes, mark-release-recapture experiments were performed with Anopheles females collected from indoor resting-sites in a savanna area near Ouagadougou, Burkina Faso, during September 1991 and 1992. Results were used to estimate the absolute population densities, daily survival rates, and dispersal parameters of malaria vectors in that area.
In 1991 a total of 7260 female Anopheles were marked and released, of which 106 were recaptured in the release village and 6 in the neighbouring villages, a total recapture rate of 1.5%. The following year 13, 854 female Anopheles were released and 116 recaptured in Goundri and 8 in the neighbouring villages, a total recapture rate of 0.9%. Recaptures were found in three of eight villages near Goundri. Nearly all of the recaptured mosquitoes were An.gambiae s.l. Of these, molecular determination revealed that An.gambiae s.s. and An.arabiensis were present in a ratio of -2:3.
Two simple random models of dispersal were simulated and the parameters of the models determined by searching for the least-squared fit between simulated and observed distributions. The mean distance moved by individual mosquitoes, estimated in this way, ranged 350–650 m day^-1, depending on die model and the year considered. Population densities were estimated using the Lincoln Index, Fisher-Ford and Jolly's methods. The estimates of population size had high standard errors and were not particularly consistent. A 'consensus' value of 150,000–350,000 mosquitoes is believed to apply for ht An.gambiae s.l. female population. Survival was estimated to be 80–88% per day.     

The fish fauna of three North African lagoons: specific inventories,ecological status and production

This paper examines the ecological and biological status of fisheries in three coastal lagoons in the southern Mediterranean region: Merja Zerga in Morocco, Ghar El Melh in Tunisia and Lake Manzala in Egypt. Despite similarities in some ecological characteristics, the three lagoons’ respective fisheries show differences in specific composition, in population structure and in their production both in qualitative and quantitative aspects. Thus, in Merja Zerga and Ghar El Melh the fish fauna shows a marine affinity where grey mullet and eels dominate the fish production. In Lake Manzala the ichthyofauna displays a more freshwater affinity with tilapia the dominant group of species. Otherwise, overall fish production at the three sites is regulated by variations in fishing activities, local environments and seasonal conditions. A decrease in fish production was noted over recent years and this is attributed to deteriorating ecological conditions. A variety of factors are implicated including sea communication problems, reduction of the continental (fresh) water supply and increase of pollution causing eutrophication. In addition, over fishing with a continuing increase of fishing effort units, contributes to fisheries decline. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: J. R. Thompson & R. J. Flower Hydro-ecological Monitoring and Modelling of North African Coastal Lagoons     

Mitochondrial genome and a nuclear gene indicate a novel phylogenetic position of deep-sea tube-eye fish (Stylephoridae)

The rare, monotypic deep-sea fish family Stylephoridae has long been considered a member of the order Lampridiformes (opahs, velifers, ribbonfishes), and no systematic ichthyologist has questioned its placement within the order for over 80 years. Recently three individuals of Stylephorus chordatus were collected from different oceans, and we sequenced the whole mitochondrial genome and a partial nuclear recombination activating gene 1 (RAG1) gene sequences for each specimen. We aligned these sequences with those available from higher teleosts, including representative lampridiforms, and constructed two separate datasets from the sequences. The resulting trees derived from partitioned Bayesian analyses strongly indicated that S. chordatus is not a lampridiform but is closely related to the order Gadiformes (cod and their relatives). Lampridiformes is diagnosed on the basis of four synapomorphies, three of which are correlated with the rare and possibly unique ability to extend both the maxilla and premaxilla as a unit during feeding. Stylephorus also possesses such unique ability, but lacks two and possibly three of the four synapomorphies, suggesting that further morphological analysis is needed. Considering its unique morphologies with no indication of affinities within Gadiformes (or any other presently recognized order), the present results warrant a recognition of the new order for S. chordatus in fish systematics.     

Limnological studies of two contrasting but closely linked springs in Nigeria,West Africa

ABSTRACT

An account is presented of the chemistry and algal flora of two streams in Ekiti State, Nigeria. The two streams, one of which is much warmer than the other, are separate upstream but subsequently merge. A comparison of the springs revealed that while they differed markedly in temperature, colour, turbidity, conductivity, solids, total alkalinity, total hardness, Ca, SiO₃, SO₄, Mg, Cl^- and dissolved oxygen, they showed some similarities in pH, Fe, Na, K, PO₄ and NO₃. In the cold spring, while total alkalinity, conductivity and silicate increased in the wet season, total hardness decreased slightly and other variables exhibited fluctuations with season. For the warm spring, except for increased total alkalinity and total hardness, dissolved oxygen and pH decreased in the wet season. However, most parameters of the warm spring were unaffected by season. Floristically, the springs were rich in species with a total of 84 taxa: 56 in the warm spring, 33 in the cold spring, 44 at the confluence and 40 beyond the confluence. The warm spring was dominated mainly by blue-green algae such as Lyngbya birgei, Synechococcus aequalis and Oscillatoria spp.; the cold spring was dominated by Rhizoclonium hieroglyphicum and Navicula spp. The confluence was dominated by Terpsinoe musica, R. hieroglyphicum and Lyngbya birgei, while the site downstream of the confluence was dominated entirely by R. hieroglyphicum. In most cases, the confluence and downstream area beyond the confluence of the springs exhibited intermediate characteristics between the two springs. This study is a contribution to the dearth of information on streams in West Africa.