Rapid response to intraclonal selection in the pea aphid (Acyrthosiphon pisum)

Summary Pea aphids show intraclonal variability in antipredator behaviour. Among the offspring of a single parthenogenetically reproducing female, some individuals drop from the plant in response to alarm pheromone while others remain on the plant. We demonstrate that this intraclonal behavioural variability can be altered by selection. The proportion of aphids dropping in response to alarm pheromone was significantly greater in lines in which this behaviour was selected than in clonally identical lines in which the opposite phenotype was favoured. This change occurred within one generation and could not be attributed to grand-maternal effects, nor to environmental effects. These results demonstrate the ability of clonal aphids to adapt to changes in the environment within a single generation.     

Evidence for an intraclonal random shift between two types of cell cycle times in an embryonal carcinoma cell line

In a recent paper we reported the discovery of an intraclonal bimodal-like cell cycle time variation within the multipotent embryonal carcinoma (EC) PCC3 N/1 line growing in the exponential phase in the undifferentiated state. The variability was found to be localized in the G1 period. Furthermore, an inverse relation between cell size and cell generation time was found in the cell system analysed. It was suggested that the bimodal-like intraclonal time variability previously reported was attributable to an intraclonal shift between two types of cell-growth-rate cycles and that the cell-growth cycle has a supramitotic character, being dissociated from the DNA-division cycle. The growth rate heterogeneity in the cell population was found to need three cell cycles to reach full dispersion in time. This was assumed to be due to a decreased inheritance from sister cell pairs to second cousin cell pairs. Thus, the interesting feature is that in one and the same multipotent cell line there was evidence for an intraclonal instability with a random shift between two types of cell cycle differing in the duration of their G1 period.     

Reassessment of the Morphology and Taxonomic Status of the Earliest Herpetotheriid Marsupials of Europe

The earliest Eocene locality of Dormaal (Belgium) has provided the oldest Cenozoic herpetotheriid marsupials of Europe. No herpetotheriid has ever been reported earlier than the Eocene in Europe, except for a questionable single upper molar from the Upper Cretaceous of the Belgian/Dutch border. The systematics of the herpetotheriids of Dormaal was formerly based on only a dozen dental specimens, which were assigned, after several revisions, to two species Peratherium constans and Amphiperatherium brabantense. Most importantly, these two species were considered at the root of most of the hepetotheriid lineages of the European Paleogene. Here we report a large sample of about 400 new dental remains that allow a better definition of both species as well as a testing of their systematic status. The evidence of significant morphological variability leads us to reconsider the diagnosis of Peratherium constans and to question the validity of Amphiperatherium brabantense. This study highlights that the primitive species Peratherium constans and Amphiperatherium brabantense are hardly distinguishable from each other, and therefore conclude that Peratherium constans was the only marsupial present at Dormaal. The important morphological variation exhibited by this herpetotheriid is similar to the variability observed in the type-species Peratherium elegans and in other fossil and extant metatherians. Consequently, our results suggest that several Amphiperatherium species from the Eocene could represent variants of the genus Peratherium. The question of the Amphiperatherium presence in Europe is therefore raised and a thorough discriminate analysis of both genera should be conducted in later works.     

Caractères taxinomiques et spécificité dans le genreAsplanchna (Rotifère)

A comparative analysis of eight characters in two clones ofA. brightwelli and a clone ofA. intermedia, fed withParamecium orBrachionus, is made to determine the intraclonal, interclonal and interspecific variations in this complex of species.The trophi morphology appears the most species specific criterium whereas the other features (size of males, diameter and ornamentation of resting eggs, nuclear number in syncytial glands) show variability, either genetic or related to environmental conditions. The variation observed in the ornamentation of resting eggs and in the nuclear number of vitellogen was distributed along a continuous gradient.

     

Identity and delimitation of the American species of Litsea Lam. (Lauraceae): a morphological approach

The genus Litsea in America is a small group of species with high variability that has not been evaluated rigorously; authors recognize either three or as many as 11 species because of the unclear delimitation of taxa. Our focus in this study was to resolve the number, names, and distinguishing features of the American species of Litsea, based on strict morphological analyses, namely Population aggregation analysis and Multivariate analyses. Population aggregation analysis revealed a large number of polymorphisms in all populations; nevertheless, L. aestivalis was distinguished from the other species. Ordination of character variability by principal components analysis and non-metric multidimensional scaling supported the distinction of seven additional species. Finally, eight species of Litsea are recognized in America and a key for their identification is provided.     

Isolation and partial characterization of gamone 1 of Euplotes octocarinatus

A polypeptide, termed gamone 1, was isolated and purified to homogeneity from culture filtrates of mating type VII of the freshwater ciliate Euplotes octocarinatus. The gamone induces intraclonal conjugation in cells of certain other mating types. The isolation and purification of the gamone was carried out by a combination of two chromatographic steps. The purified gamone was found to be still effective in a concentration of approx. 10⁻¹⁵M.     

Morphology and age variability of Daphnia galeata Sars (Cladocera: Daphniidae) in two adjacent water bodies of the Kola Peninsula

The morphology and age variability of Daphnia galeata Sars (Cladocera: Daphniidae) in two adjacent water bodies of the Kola Peninsula are studied. The reliability of characters usually used for diagnosis of adult individuals of the given species was verified, and their formation in the postembryonic period was traced. If the identification of D. galeata from Lake Bolshoi Vudvyar caused no doubts, the population from Lake Malyi Vudvyar was atypical with respect to several morphological characters. We concluded that plastic characters, such as body shape, as well as the shape of the dorsal crest and helmet on the head are unreliable for distinguishing closely related species of water fleas. At the same time, some small-size characters, for instance, the relative depth of the medial crest on the posterior side of the head, allow us to diagnose this species with confidence.     

Molecular phylogeny of Phalaenopsis Blume (Orchidaceae) on the basis of plastid and nuclear DNA

Representatives of the genus Ancistrocladus, woody lianas of tropical Africa and Asia, contain pharmaceutically interesting alkaloids and have been the subjects of intensive phytochemical investigations. In Southeast Asia, Ancistrocladus tectorius, previously regarded as the only species of the genus from this region, is extremely polymorphic with respect to naphthylisoquinoline alkaloids, indicating that this taxon might be comprised of several morphologically similar species. We performed a comparative study of the ITS region of nuclear rDNA and of the trnK intron of cpDNA as well as an ISSR fingerprint analysis. Using 75 samples of A. tectorius from 21 locations in comparison to samples of other Ancistrocladus species from Asia and from West and Central Africa, we investigated patterns of species differentiation within this taxon. We found the high variability of chemical compounds described for A. tectorius to be paralleled by a high genetic variability of the units that have been assigned to this taxon. Samples assigned to A. tectorius were paraphyletic with respect to species from the Indian subcontinent, and intraspecific variability was comparable to interspecific variability among the African taxa. In addition, groups of individuals occurring in sympatry were found to be more similar to those from other locations, suggesting low levels of gene flow between those sympatric groups. This indicates either a considerable number of hybridization events during the evolution of A. tectorius or the existence of several distinguishable species not yet recognized. Our results are a first step in the development of species or population-specific markers for the prediction of the alkaloid spectrum of samples. This will help to improve the reproducibility of phytochemical research on Ancistrocladus.     

Effects of individual variability on the outcome of competition between cladoceran species

Simulation modeling was performed to study the impact of individual variability on the population dynamics of particular cladoceran populations and the outcome of interspecific competition at low and high temperatures. The study was performed on one species of small size (Ceriodaphnia quadrangula O.F. Müller) and one species of large size (Simocephalus vetulus O.F. Müller). Laboratory experiments were performed to estimate the average values of principal demographic parameters of these species and their coefficients of variability at two temperatures, 18 and 27°C. Population dynamics of the two species in mono- and mixed cultures was simulated with and without accounting for individual variability using available published data and our own data on demographic parameters. Individual variability was shown to help populations survive unfavorable trophic conditions and to give competitive advantage over populations in which all individuals of the same age are identical. Individual variability decreased with rising temperatures due to probable acceleration of physiological processes.     

Tracking the variability of phenotypic traits on a molecular phylogeny: an example from scolopendrid centipedes in peninsular India

Taxonomic studies on scolopendrid centipedes have often documented variability at the individual and population levels and applied those data to questions of species delimitation, but these investigations have mostly lacked an explicit phylogenetic framework. A molecular phylogeny and recent taxonomic revision for Indian species of the scolopendrid Digitipes Attems, 1930, permit variability of traditional taxonomic characters for Scolopendridae to be mapped onto a phylogeny. Based on their fit to the tree using maximum likelihood, reliable species-level characters include the number of glabrous antennal articles, presence of a median ridge on the tergites, and presence or absence of a tarsal spur on leg 20. Characters that are conserved within and diagnostic for particular species but labile within others (typically with geographic structure) include the first tergite with paramedian sutures, presence or absence of a lateral spine on the coxopleuron, and the number of spines in a ventromedial row on the ultimate leg prefemur. Comparisons with published accounts of variability in species of other scolopendrid genera, particularly Scolopendra and Otostigmus, show that Indian Digitipes has conserved morphology in some characters that are taxonomically useful elsewhere in the family, and most of its taxonomically informative characters have analogous patterns of variability in other genera. The approach used in this study to evaluate morphological variation in a phylogenetic framework can be applied to other taxa in which morphologically cryptic species have been reported and where species diagnosis requires a combination of characters.     

Physiological and anatomical trait variability of dominant C4 grasses

Climate variability is a key driver of physiological responses in common grass species in grasslands of North America. Differences in microanatomical traits among coexisting species may influence physiological responses to climate variability over large geographic scales. The goal of this research was to determine leaf-level physiological and microanatomical trait variability among four dominant C₄ grass species across a natural precipitation gradient. Physiological traits were observed to vary significantly across the gradient with greater variability than microanatomical traits. Microanatomical traits were shown to predict physiological responses in A. gerardii and P. virgatum, but the nature of the relationships varied between species. These results illustrate that microanatomical and physiological traits vary across a precipitation gradient, there are clear linkages between microanatomy and physiology in grass species, and this evidence underscores the need for further investigation using phylogenetically diverse assemblages.     

High-throughput analysis of intraclonal variability of glycoprotein sialylation

Development of recombinant Chinese Hamster Ovary (CHO) cells producing therapeutic proteins requires analyzing the quality, such as sialic acid content, of proteins produced by many cell clones. In order to perform these analyses, high-throughput methods are required. Conventional methods for quantifying sialic acid, however, require protein purification, which is time consuming and cannot be used for high-throughput analysis. Here we used a high-throughput method (HTM) that we recently developed to analyze the intraclonal variability of 24 CHO cell subclones. The sialic acid content varied significantly from 1 to 70 mg sialic acid/g protein, and the concentration of total proteins secreted by the cells varied from 41 to 214 mg/L. In addition, the sialic acid content was negatively correlated with total protein concentration. This trend agrees with previous theoretical and experimental studies. Overall, the HTM can finish these analyses in 15 minutes, while conventional methods used in previous studies will require at least 24 days. Thus, the HTM can significantly accelerate the analyses of clonal and intraclonal variability in cell line development     

Seasonal variability of the embryonic development time of three planktonic crustaceans: dependence on temperature,adult size,and egg weight

The seasonal variability of the temperature dependence of embryonic development in Daphnia galeata, D. hyalina and Eudiaptomus gracilis of Lake Constance was investigated. We found a significant correlation between the adult size and the variability of the temperature function in all three species, and only in case of D. hyalina a significant influence of egg weight on the temperature function. We could demonstrate no general trend in the influence of the thermal adaptation of parent animals on the temperature function, but some specifically different responses among the investigated species.     

Natural sequence variants of yeast environmental sensors confer cell‐to‐cell expression variability

Living systems may have evolved probabilistic bet hedging strategies that generate cell‐to‐cell phenotypic diversity in anticipation of environmental catastrophes, as opposed to adaptation via a deterministic response to environmental changes. Evolution of bet hedging assumes that genotypes segregating in natural populations modulate the level of intraclonal diversity, which so far has largely remained hypothetical. Using a fluorescent P_met17‐GFP reporter, we mapped four genetic loci conferring to a wild yeast strain an elevated cell‐to‐cell variability in the expression of MET17, a gene regulated by the methionine pathway. A frameshift mutation in the Erc1p transmembrane transporter, probably resulting from a release of laboratory strains from negative selection, reduced P_met17‐GFP expression variability. At a second locus, cis‐regulatory polymorphisms increased mean expression of the Mup1p methionine permease, causing increased expression variability in trans. These results demonstrate that an expression quantitative trait locus (eQTL) can simultaneously have a deterministic effect in cis and a probabilistic effect in trans. Our observations indicate that the evolution of transmembrane transporter genes can tune intraclonal variation and may therefore be implicated in both reactive and anticipatory strategies of adaptation.     

Intra‐ and interclonal phenotypic and genetic variability of the trematode Maritrema novaezealandensis

Explaining the origin and maintenance of phenotypic variation remains a central challenge in evolutionary biology. Using the trematode parasite Maritrema novaezealandensis, we examined variability in several morphological, behavioural, and physiological phenotypic traits at the same time as controlling for genotype by using genetically identical parasite clonal lineages. We measured several morphological traits, photoreactive responses, and survivorship to quantify the amount of phenotypic variation within and among 42 clonal parasite lines. Additionally, we tested Lerner's hypothesis that homozygotes are more variable than heterozygotes and assessed correlations between heterozygosity and phenotypic variation among clones. We found substantial differences among clones in morphology, photoreactive behaviour, and survivorship, yet no significant differences among clones in levels of intraclonal phenotypic variability were seen. Although the results demonstrate that conspecific trematode clones have significantly different levels of phenotypic variability, consistent differences over time were not always apparent. Finally, no correlation was found between heterozygosity and phenotypic variation among clones and the pattern of highly variable homozygotes, as observed by Lerner, was not evident in the present study. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 103 , 106–116.     

To compete or not to compete: an experimental study of interactions between plant species with contrasting root behaviour

Game-theoretic models predict that plants with root systems that avoid belowground competition will be displaced by plants that overproduce roots in substrate shared with competitors. Despite this, both types of root response to neighbours have been documented. We used two co-occurring clonal species (Glechoma hederacea and Fragaria vesca) with contrasting root responses to neighbours (avoidance of competition and contesting of resources, respectively) to examine whether functional variation in other traits affected the success of each rooting strategy, leading to a different outcome from that predicted on the basis of root behaviour alone. Vegetative propagation rates, morphology and biomass allocation patterns were examined when each species was challenged with competition from physically separate ramets with either the same rooting strategy (intraclonal competition) or the contrasting rooting strategy (interspecific competition). Contrary to the predictions of game-theoretic models, the species that exhibits avoidance of root competition (Glechoma) was not competitively inferior to the species that does not (Fragaria). Glechoma achieved greater total mass in the interspecific treatment than in the intraclonal treatment. However, Fragaria did not experience more intense competition from Glechoma than it did in the intraclonal treatment. Strong interference between the two species appeared to be avoided because Glechoma invested preferentially in rapid exploitation of unoccupied space, whereas Fragaria invested in increasing the competitive ability and local persistence of established ramets. Our results suggest that interspecific trade-offs between traits related to competitive ability and resource exploitation can allow coexistence of species with contrasting rooting behaviours. Full assessment of the adaptive value of different root responses to neighbours therefore requires concurrent consideration of the combined effects of a wide array of functional traits.     

Plant resource-use strategies: the importance of phenotypic plasticity in response to a productivity gradient for two subalpine species

Background and Aims

Functional traits are indicators of plant interactions with their environment and the resource-use strategies of species can be defined through some key functional traits. The importance of genetic variability and phenotypic plasticity in trait variations in response to a common environmental change was investigated in two subalpine species.

Methods

Two species with contrasted resource-use strategies, Dactylis glomerata and Festuca paniculata, were grown along a productivity gradient in a greenhouse experiment. Functional traits of different genotypes were measured to estimate the relative roles of phenotypic plasticity and genetic variability, and to compare their levels of phenotypic plasticity.

Key Results

Trait variability in the field for the two species is more likely to be the result of phenotypic plasticity rather than of genetic differentiation between populations. The exploitative species D. glomerata expressed an overall higher level of phenotypic plasticity compared with the conservative species F. paniculata. In addition to different amplitudes of phenotypic plasticity, the two species differed in their pattern of response for three functional traits relevant to resource use (specific leaf area, leaf dry matter content and leaf nitrogen content).

Conclusions

Functional trait variability was mainly the result of phenotypic plasticity, with the exploitative species showing greater variability. In addition to average trait values, two species with different resource-use strategies differed in their plastic responses to productivity.     

Inter- and intra-specific patterns of density dependence and population size variability in Salmoniformes

Population dynamics are typically affected by a combination of density-independent and density-dependent factors, the latter of which have been conceptually and theoretically linked with how variable population sizes are over time—which in turn has been tied to how prone populations are to extinction. To address evidence for the occurrence of density dependence and its relationship with population size variability (pv), we quantified each of these for 126 populations of 8 species of Salmoniformes. Using random-effects models, we partitioned variation in the strength of density dependence and the magnitude of pv between and within species and estimated the correlation of density dependence and population size variability at both the between- and within-species levels. We found that variation in the strength of density dependence was predominately within species (I ² = 0.47). In contrast, variation in population size variability was distributed both between and within species (I ² = 0.40). Contrary to theoretical and conceptual expectations, the strength of density dependence and the magnitude of population size variability were positively correlated at the between species level (r = 0.90), although this estimate had 95 % credibility intervals (Bayesian analogues to confidence intervals) that overlapped zero. The within-species correlation between density dependence and population size variability was not distinguishable from zero. Given that density dependence for Salmoniformes was highly variable within species, we next determined the joint effects of intrinsic (density-dependent) and extrinsic (density-independent) factors on the population dynamics of a threatened salmonid, the Lahontan cutthroat trout (Oncorhynchus clarkii henshawi). We found that density-dependent and -independent factors additively contributed to population dynamics. This finding suggests that the observed within-species variability in density dependence might be attributable to local differences in the strength of density-independent factors.     

Effects of inoculation with native arbuscular mycorrhizal fungi on clonal growth of Potentilla reptans and Fragaria moschata (Rosaceae)

Many clonal plants live in symbiosis with ubiquitous arbuscular mycorrhizal (AM) fungi, however, little is known about their interaction with respect to clonal reproduction and resource acquisition. The effects of arbuscular mycorrhiza on the growth and intraclonal integration between ramets of two stoloniferous species were studied experimentally in a nutritionally homogenous soil environment. Two species coexisting at the same field site, Potentilla reptans and Fragaria moschata, were selected as model plants for the study. Pairs of their ramets were grown in neighbouring pots with each ramet rooted separately. Four inoculation treatments were established: (1) both mother and daughter ramets remained non-inoculated, (2) both ramets were inoculated with a mixture of three native AM fungi from the site of plant origin, (3) only mother or (4) daughter ramet was inoculated. The stolons connecting the ramets were either left intact or were disrupted. Despite the consistent increase in phosphorus concentrations in inoculated plants, a negative growth response of both plant species to inoculation with AM fungi was observed and inoculated ramets produced fewer stolons and fewer offspring ramets and had lower total shoot dry weights as compared to non-inoculated ones. A difference in the extent of the negative mycorrhizal growth response was recorded between mother and daughter ramets of P. reptans, with daughter ramets being more susceptible. Due to AM effect on ramet performance, and thereby on the source-sink relationship, inoculation also significantly influenced biomass allocation within clonal fragments. Physiological integration between mother and daughter ramets was observed when their root systems were heterogeneous in terms of AM colonization. These results hence indicate the potential of mycorrhizal fungi to impact clonal growth traits of stoloniferous plant species, with possible consequences for their population dynamics.     

First Evidence of Intraclonal Genetic Exchange in Trypanosomatids Using Two Leishmania infantum Fluorescent Transgenic Clones

Background

The mode of reproduction in Leishmania spp has been argued to be essentially clonal. However, recent data (genetic analysis of populations and co-infections in sand flies) have proposed the existence of a non-obligate sexual cycle in the extracellular stage of the parasite within the sand fly vector. In this article we propose the existence of intraclonal genetic exchange in the natural vector of Leishmania infantum.

Methodology/Principal findings

We have developed transgenic L. infantum lines expressing drug resistance markers linked to green and red fluorescent reporters. We hypothesized whether those cells with identical genotype can recognize each other and mate. Both types of markers were successfully exchanged within the sand fly midgut of the natural vector Phlebotomus perniciosus when individuals from these species were fed with a mixture of parental clones. Using the yellow phenotype and drug resistance markers, we provide evidence for genetic exchange in L. infantum. The hybrid progeny appeared to be triploid based on DNA content analysis. The hybrid clone analyzed was stable throughout the complete parasite life cycle. The progress of infections by the hybrid clone in BALB/c mice caused a reduction in parasite loads in both spleen and liver, and provided weight values similar to those obtained with uninfected mice. Spleen arginase activity was also significantly reduced relative to parental strains.

Conclusions/Significance

A L. infantum hybrid lineage was obtained from intraclonal genetic exchange within the midgut of the natural vector, suggesting the ability of this parasite to recognize the same genotype and mate. The yellow hybrid progeny is stable throughout the whole parasite life cycle but with a slower virulence, which correlates well with the lower arginase activity detected both in vitro and in vivo infections.