A mitochondrial phylogeography of Brachidontes variabilis (Bivalvia: Mytilidae) reveals three cryptic species

This study examined genetic variation across the range of Brachidontes variabilis to produce a molecular phylogeography. Neighbour joining (NJ), minimum evolution (ME) and maximum parsimony (MP) trees based on partial mitochondrial DNA sequences of 16S-rDNA and cytochrome oxidase (COI) genes revealed three monophyletic clades: (1) Brachidontes pharaonis s.l. from the Mediterranean Sea and the Red Sea; (2) B. variabilis from the Indian Ocean; (3) B. variabilis from the western Pacific Ocean. Although the three clades have never been differentiated by malacologists employing conventional morphological keys, they should be ascribed to the taxonomic rank of species. The nucleotide divergences between Brachidontes lineages (between 10.3% and 23.2%) were substantially higher than the divergence between congeneric Mytilus species (2.3–6.7%) and corresponded to interspecific divergences found in other bivalvia, indicating that they should be considered three different species. Analysis of the 16S-rDNA sequences revealed heteroplasmy, indicating dual uniparental inheritance (DUI) of mtDNA in the species of Brachidontes collected in the Indian Ocean, but not in the species in the Pacific nor in the species in the Red Sea and the Mediterranean Sea. When we employed the conventional estimate of the rate of mitochondrial sequence divergence (2% per million years), the divergence times for the three monophyletic lineages were 6–11 Myr for the Indian Ocean and Pacific Ocean Brachidontes sp. and 6.5–9 Myr for the Red Sea and Indian Ocean Brachidontes sp . Thus, these species diverged from one another during the Miocene (23.8–5.3 Myr). We infer that a common ancestor of the three Brachidontes species probably had an Indo-Pacific distribution and that vicariance events, linked to Pleistocene glaciations first and then to the opening of the Red Sea, produced three monophyletic lineages.     

Three new species of Fissarcturus (Isopoda, Antarcturidae) from the Southern Ocean

Fissarcturus bathyweddellensis sp. nov. and Fissarcturus sandwichi sp. nov. are described from the abyssal Southern Ocean near the Antarctic Peninsula and Fissarcturus rossi sp. nov. is described from the shallow Ross Sea. A list of all described species of Fissarcturus is given. The new species differ from recognized species of the genus in the following respects: F. bathyweddellensis can be distinguished based on spination on the dorsum of the body, which is described in detail herein. It is most similar to F. emarginatus Brandt, 1990, but this has, for example, a shorter and less stout second cephalic spine. F. rossi can also be distinguished from F. bathyweddellensis based on spine pattern. Whereas all dorsal spines of F. bathyweddellensis are smooth, those of F. rossi are covered with spinules. F. sandwichi can be distinguished from the other species of the genus by the strong frontally bent supraocular spines (females with second cephalic spines) and dorsal body surface, which is covered with flat, cauliflower-like elevations in submedial, lateral and coxal rows.  © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 149 , 263–290.     

Taxonomic revision, phylogenetic analysis, and biogeography of the bee genus Tropidopedia (Hymenoptera, Apidae, Tapinotaspidini)

The species of the bee genus Tropidopedia stat. nov. are revised. Thirteen new species are proposed: T. carinata sp. nov. , T. caracicola sp. nov. , T. danunciae sp. nov. , T. duckeana sp. nov. , T. eliasi sp. nov. , T. flavolineata sp. nov. , T. friesei sp. nov. , T. japuraensis sp. nov. , T. nigrita sp. nov. , T. nigrocarinata sp. nov. , T. ornata sp. nov. , T. peruana sp. nov. and T. venezuelana sp. nov. Taxonomic notes are provided for another four species: Tropidopedia punctifrons (Smith, 1879) comb. nov. , T. pallidipennis (Friese, 1899) comb. nov. , T. seabrai (Michener & Moure, 1957) and T. arcuatilis (Vachal, 1909) comb. nov. , including designation of a lectotype for Tetrapedia arcuatilis Vachal. An identification key, illustrations for main diagnostic characters, and distributions maps for all species are provided. A phylogenetic analysis was carried out to evaluate the monophyly of Tropidopedia and its main species groups, as well as to position it among the related genera. Biogeographical patterns are discussed.  © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 151 , 511–554.     

A new species of Magnolia sect. Tulipastrum (Magnoliaceae) from Fujian, China

Magnolia polytepala Law, R.Z. Zhou & R.J. Zhang sp. nov. (Magnoliaceae) a new species from Fujian, south-east China, is described and illustrated. The species was found growing only in the evergreen broad-leaved forests of Mount Wuyishan at altitudes of 500–1200 m. Notes are also presented on the phenology and conservation status of the new species. It is closely related to Magnolia liliiflora Desr., but differs from the latter in its stunted habit (less than 2 m tall) and tepals, which are more numerous (12–16) and not contorted at the base.  © 2006 The Linnean Society of London, Botanical Journal of the Linnean Society , 2006, 151 , 289–292.     

Revision of the New Caledonian endemic genus Gracilipsodes (Trichoptera: Leptoceridae: Grumichellini)

The taxonomy and systematics of the New Caledonian endemic caddisfly genus Gracilipsodes Sykora, 1967 (Trichoptera: Leptoceridae: Grumichellini) are reviewed. Seven new species represented by males are described and illustrated: Gracilipsodes aoupiniensis sp. nov. , Gracilipsodes aureus sp. nov. , Gracilipsodes aurorus sp. nov. , Gracilipsodes grandis sp. nov. , Gracilipsodes koghiensis sp. nov. , Gracilipsodes lanceolatus sp. nov. , and Gracilipsodes robustus sp. nov. Molecular phylogenetic analyses are applied to discern the relationships among the species of the genus and their closest relatives, based on sequence characters from the nuclear gene translation elongation factor-1α (EF-1α) and the three mitochondrial genes cytochrome oxidase I (COI), COII, and ribosomal large subunit (16S). The data are analyzed using parsimony and Bayesian inference, revealing a monophyletic Gracilipsodes with the eastern Australian monotypic genus Triplexa as its closest relative. Gracilipsodes is in turn divided into two major lineages.  © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society, 2008, 153 , 425–452.     

New Dictyoneuridans (Insecta: Dictyoneurida Handlirsch = Palaeodictyoptera Goldenberg) from the Permian Deposits of the Vorkuta Basin

Two new species of the family Spilapteridae, Homaloneura brauckmanni sp. nov. and Baeoneura desperata sp. nov. are described from the Lower Permian insect bearing deposits of the Vorkuta Coal Basin. For Vorkutoneura variabilis Sinitshenkova, 1977 (Spilapteridae), the imaginal forewing and nymphal hindwings are described for the first time. The dictyoneuridan assemblage does not agree with the existing dating of these deposits as Late Permian, as the insect assemblage suggests an Early Permian age.     

Speciation in Darwin's darklings: taxonomy and evolution of Stomion beetles in the Galápagos Islands, Ecuador (Insecta: Coleoptera: Tenebrionidae)

Stomion is one of three speciose and taxonomically difficult genera of flightless Darwin's darkling beetles of the Galápagos Islands. The previously named species and subspecies of Stomion are analysed by morphometric and cladistic methods. Eleven species are here recognized, which probably descended from colonization by a single ancestral species. Cladistic analysis yielded two weakly supported clades that are different from previously published morphological and allozyme genotype groups. Phenotypic and genotypic characters may be evolving independently. There is much within-species variation, but there is no compelling evidence of adaptive radiation in Stomion , in contrast to that in the famous Darwin's finches. The analyses show the need for changes in morpho-species taxonomy: S. punctipennis Van Dyke ( syn. nov. ) is elevated to full species from a subspecies of S. galapagoensis Waterhouse. There is no evidence to support the validity of: S. laevigatum santacruzensi Franz ( syn. nov. ), synonomized here under S. l. laevigatum Waterhouse; S. galapagoensis leleupi Kaszab ( syn. nov. ), synonomized here under S. linelli Blair; S. galapagoensis pinzoni Franz ( syn. nov. ), synonomized here under S. obesum Van Dyke. S. genovesa sp. nov. is described from Genovesa Island. Lectotypes are designated for S. galapagoensis Waterhouse, S. laevigatum Waterhouse and S. helopoides Waterhouse .   © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society , 2004, 141 , 135–152.     

A new species of Swertia L. (Gentianaceae) from Nepal

Swertia barunensis P. Chassot sp. nov. from Nepal is described and illustrated. It was collected in 1997 in an alpine meadow in the Makalu Barun National Park at an elevation of 4200 m. It belongs to Swertia section Macranthos T.-N. Ho & S.-W. Liu and resembles S. pseudohookeri H. Smith, from which it differs mainly by the shape of the nectary and the exomorphic seed structure. A key to all the species of sect. Macranthos is provided. The affinities of S. barunensis with some other taxa in the subtribe Swertiinae (Griseb.) Rchb. are also briefly discussed.  © 2003 The Linnean Society of London, Botanical Journal of the Linnean Society , 2003, 141, 389–394.     

Ammonia-oxidizing Archaea in the Arctic Ocean and Antarctic coastal waters

We compared abundance, distributions and phylogenetic composition of Crenarchaeota and ammonia-oxidizing Archaea (AOA) in samples collected from coastal waters west of the Antarctic Peninsula during the summers of 2005 and 2006, with samples from the central Arctic Ocean collected during the summer of 1997. Ammonia-oxidizing Archaea and Crenarchaeota abundances were estimated from quantitative PCR measurements of amoA and 16S rRNA gene abundances. Crenarchaeota and AOA were approximately fivefold more abundant at comparable depths in the Antarctic versus the Arctic Ocean. Crenarchaeota and AOA were essentially absent from the Antarctic Summer Surface Water (SSW) water mass (0–45 m depth). The ratio of Crenarchaeota 16S rRNA to archaeal amoA gene abundance in the Winter Water (WW) water mass (45–105 m depth) of the Southern Ocean was much lower (0.15) than expected and in sharp contrast to the ratio (2.0) in the Circumpolar Deep Water (CDW) water mass (105–3500 m depth) immediately below it. We did not observe comparable segregation of this ratio by depth or water mass in Arctic Ocean samples. A ubiquitous, abundant and polar-specific crenarchaeote was the dominant ribotype in the WW and important in the upper halocline of the Arctic Ocean. Our data suggest that this organism does not contain an ammonia monooxygenase gene. In contrast to other studies where Crenarchaeota populations apparently lacking amoA genes are found in bathypelagic waters, this organism appears to dominate in well-defined, ammonium-rich, near-surface water masses in polar oceans.     

Ecology and systematics of mangrove crabs of the genus Perisesarma (Crustacea: Brachyura: Sesarmidae) from East Africa

East Africa has a reduced mangrove crab species richness when compared to Asian mangroves. To date, only one species of Perisesarma de Man, 1895 has been reported in East Africa, despite more than 30 years of mangrove research in this region. Based on morphology, colour, mtDNA and behaviour, we describe a new species of Perisesarma from Kenya, P. samawati sp. nov. Surprisingly, when comparing molecular data from other species within this genus, P. samawati sp. nov. and the sympatric P. guttatum (A. Milne Edwards, 1869) are not sister species. Some aspects of the ecology of P. guttatum and P. samawati sp. nov. are compared and the differences discussed. Additionally, we compare P. samawati sp. nov. with the ecological literature of a possible sister species P. eumolpe de Man, 1895 from Malaysian mangroves. Our findings suggest that the new species is an ecologically important species in East African mangroves.  © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society , 2004, 141 , 435–445.     

Description of a new species of Mesochaetopterus (Annelida, Polychaeta, Chaetopteridae), with redescription of Mesochaetopterus xerecus and an approach to the phylogeny of the family

Mesochaetopterus rogeri sp. nov. , a new large chaetopterid polychaete from the Mediterranean Sea, is described. The analyses of partial sequences from the nuclear 18S rRNA (643 bp) and the mitochondrial cytochrome oxidase I (577 bp) genes of representative individuals of all known chaetopterid genera indicated the initial assignment of the new species into Mesochaetopterus . These analyses also supported the monophyly of the family and revealed two well-supported clades: Chaetopterus/Mesochaetopterus and Spiochaetopterus/Phyllochaetopterus . Mesochaetopterus rogeri sp. nov. is close to Mesochaetopterus xerecus , which is redescribed here from newly collected material. Mesochaetopterus rogeri sp. nov. was characterized as follows: (1) two long tentacles with dorsal transversal black bands of alternating widths (sometimes with two additional longitudinal light-brown bands); (2) region A with nine chaetigers (up to 12), with 13–19 modified chaetae in the fourth chaetiger; (3) region B with three flat segments, with accessory feeding organs in the second and third segments; (4) sandy straight tubes, 2.5-m long or more, vertically embedded in the sand. In the Bay of Blanes, M. rogeri sp. nov. occurs between 6- and 9-m deep (but also up to 30-m deep), in a patchy distribution (< 1 individual m⁻²), with maximum densities in April/June (likely to be the result of recruitment events), and minimum densities in September/November (likely to be a behavioural response to increasing sediment dynamics). Although it was originally thought that M. rogeri sp. nov. could be an introduced species, we argue that it is probably a native of the Mediterranean that has been overlooked by scientists up to now.  © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society , 2008, 152 , 201–225.     

Systematics of the bryozoan genus Macropora (Cheilostomata)

Macropora is a distinctive genus of anascan cheilostomes. All species have large zooids with an extensive cryptocystal frontal shield perforated by numerous pores through which parietal muscle strands pass. Also characteristic of Macropora are the calcified opercula closing the d -shaped orifice, avicularia resembling autozooids but having slightly enlarged, typically crenulated opercula/mandibles, and large ovicells that are often costate. This mostly Australasian genus has a documented fossil record stretching back to the Eocene. Here we revise the generic diagnosis of Macropora and describe eight new species from New Zealand (three Recent: M. nodulosa sp. nov. , M. filifera sp. nov. and M. carlosi sp. nov. ; five fossil: M. septispinosa sp. nov. , M. similis sp. nov. , M. pittensis sp. nov. , M. leeae sp. nov. and M. bullata sp. nov. ) and one new species from Japan ( M. mawatariorum sp. nov. ), the only species known with certainty to occur in the northern hemisphere. New observations are given for some previously described species, several of which are illustrated using SEM for the first time. The northern hemisphere Upper Cretaceous species Monoporella exsculpta (Marsson), showing features allowing it to be placed tentatively in the stem-group of Macropora , is redescribed. Attempts to resolve the phylogenetic relationships of species within Macropora were hampered by the relatively few morphological characters compared with the number of species, and it proved impossible to obtain a phylogeny robust to slight changes in taxon and/or character inclusion. The favoured cladogram has poor bootstrap and Bremer support, and its stratigraphical and biogeographical congruences are low.  © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society , 2008, 153 , 115–146.     

The sciarid fauna of the British Isles (Diptera: Sciaridae), including descriptions of six new species

The results of a revision of the Sciaridae (Diptera: Nematocera) from the British Isles are presented, carried out as a preliminary to the preparation of a new Handbook for the identification of the British and Irish fauna of this family. A total fauna of 263 species is confirmed, including many species new to the British Isles: 111 new to Great Britain and 32 new to Ireland. Epidapus ( Pseudoaptanogyna ) echinatum Mohrig & Kozánek, 1992 , hitherto known only from North Korea, is newly recorded from Europe. Six species are described as new to science: Bradysia austera Menzel & Heller sp. nov. , Bradysia ismayi Menzel sp. nov. , Bradysia nigrispina Menzel sp. nov. , Corynoptera flavosignata Menzel & Heller sp. nov. , Corynoptera uncata Menzel & Smith sp. nov. and Epidapus subgracilis Menzel & Mohrig sp. nov . The following new synonymies are proposed: Leptosciarella nigrosetosa (Freeman, 1990) =  Leptosciarella truncatula Mohrig & Menzel, 1997 ; Sciara nursei Freeman, 1983 =  Sciara ulrichi Menzel & Mohrig, 1998. Many misidentifications in the previous literature are corrected. Details of the collection data and location of specimens examined are provided under each species. The localities from which Sciaridae were collected in the British Isles are documented by modern county and grid references and the habitat indicated where known, to assist in assessing the ecological requirements of each species.  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 146 , 1–147.     

Coccidian Parasites of Intertidal Fishes from Wales: Systematics, Development, and Cytochemistry

SYNOPSIS. Examination of littoral fish Blennius pholis and Cottus bubalis caught at Aberystwyth and Porth Cwyfan, Wales. U.K., revealed 2 species of coccidia.
Eimeria dingleyi sp. n. Oocysts spherical (16.1–19.2) to subspherical (13.9–14.2 × 18.8–20.0) μm, with thin walls; sporulation outside the host to produce ellipsoid sporocysts; endogenous phases in epithelial cells throughout intestine; 26 of 58 B. pholis infected.
Eimeria variabilis (Thélohan) Reichenow. Oocysts spherical (11.9–14.6) to subspherical (9.2–10.9 × 13.9–14.3) μm; sporulation in lining of pyloric ceca and rectum; previously unrecorded schizonts and gametocytes present; 21 of 25 C. bubalis infected.
Electron microscopy revealed that the oocyst wall of E. variabilis consists of a thin membrane whereas the sporocyst wall is thick and 3-layered. Typical oocyst wall-forming bodies were absent from the macrogamete. Cytochemical tests on the endogenous stages of E. dingleyi and E. variabilis indicated that in general they resembled other coccidia in their chemical constitution.     

A revision of the assassin spiders of the Eriauchenius gracilicollis group, a clade of spiders endemic to Madagascar (Araneae: Archaeidae)

An endemic group of Malagasy spiders (Araneae: Archaeidae: Eriauchenius ) called the gracilicollis group is revised. The monophyly and phylogenetic relationships of the gracilicollis group are tested based on morphological characters. Archaeid spiders of Madagascar have evolved varying degrees of elongation in the cephalic area. Historically, it was believed that the extremely elongated cephalic area had evolved only once. These morphological data support the monophyly of the gracilicollis group and suggest that the elongated cephalic area has evolved more than once. All 14 species from the gracilicollis group are described and keyed, of which nine are new species: Eriauchenius ambre sp. nov. , Eriauchenius anabohazo sp. nov. , Eriauchenius borimontsina sp. nov. , Eriauchenius griswoldi sp. nov. , Eriauchenius halambohitra sp. nov. , Eriauchenius lavatenda sp. nov. , Eriauchenius namoroka sp. nov. , Eriauchenius spiceri sp. nov. and Eriauchenius voronakely sp. nov . The morphology of the gracilicollis group is examined in detail and figures of the male and female genitalia are presented. The distributions of the gracilicollis group species are presented and discussed and higher species group relationships within the Archaeidae are discussed.  © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society , 2008, 152 , 255–296.     

<Emphasis Type="Italic">Mirabilicoxa kussakini</Emphasis> sp. nov., a new species of Desmosomatidae (Crustacea,Isopoda, Asellota) from the Sea of Japan

Mirabilicoxa kussakini sp. nov. is described from the bathyal of the northwestern Sea of Japan. This is the first record of the genus Mirabilicoxa Hessler, 1970 in the Sea of Japan. The new species is most similar to M. similis (Hansen, 1916), M. plana Hessler, 1970 and M. minuta Hessler, 1970 from the Northwest Atlantic. It differs from them in having a more elongated body (4.1–4.5 times as long as wide) and antenna 1 with the terminal article 5 shorter than article 4.     

Development, phylogeny, and taxonomy of Bostrycapulus (Caenogastropoda: Calyptraeidae), an ancient cryptic radiation

Calyptraeid gastropods are well know for the taxonomic difficulties caused by their simple, phenotypically variable shells. In this paper I demonstrate that what was previously considered to be a single species, Crepidula aculeata , is an ancient (3–15 Myr) cryptic species complex made up of at least eight species, and that this group should be placed in the genus Bostrycapulus . Despite the difficulty in finding diagnostic adult shell and anatomical features upon which species can be unambiguously identified, DNA sequences, protoconch morphology, embryonic morphology and developmental characters clearly differentiate these eight species. A single species with direct development and nurse eggs is present in the South Atlantic, and a species with planktotrophic development occurs in the equatorial Pacific. The species from Japan, Australia, Florida, the Pacific coasts of Mexico and Central America, and the Cape Verde Islands all have direct development. Most of these species are separated by > 15% divergence in COI sequence data. The fossil record of Bostrycapulus goes back to the Miocene, which agrees with genetic estimates of divergences within the genus ranging from 3 to 15 Mya. Surprisingly, these ancient species differ only slightly in morphology from each other and genetic differentiation does not correlate with geographical distance. I revise the genus Bostrycapulus on the basis of differences in adult morphology, embryonic morphology, mode of development, protoconch morphology, and DNA sequence data. I also describe four new species ( B. pritzkeri sp. nov., B. odites sp. nov., B. latebrus sp. nov. and B. urraca sp. nov. ) and remove three others ( B. gravispinosus , B. calyptraeformis , and B.  cf. tegulicius ) from synonymy with B. aculeatus .  © 2005 The Linnean Society of London, Zoological Journal of the Linnean Society , 2005, 144 , 75−101.     

Three new species with two flowered spikelets in Acantholimon (Plumbaginaceae) from East Anatolia, Turkey

Three new species, Acantholimon bashkaleicum sp. nov. , Acantholimon artosense sp. nov. and Acantholimon hoshapicum sp. nov. (Plumbaginaceae) are described and illustrated. The species are all confined to B9/B10 Van Province in East Anatolia where they grow either on calcareous mountain slopes or on mountain steppes. Diagnostic morphological characteristics from the closely related species are given, along with a discussion dealing with their taxonomic relationships, and their conservation statuses are pointed out. A revised key to the Acantholimon species with heterophyllous leaves, two or more flowered and four or more bracteated spikelets is also provided.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 144 , 497–505.