Monophyletic groups within the Parmeliaceae identified by ITS rDNA, β-tubulin and GAPDH sequences

Phylogenetic relationships within the Parmeliaceae are analysed cladistically on the basis of DNA characters from partial β-tubulin, partial glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and ITS sequences. 100 taxa representing 73 of the 88 genera currently recognised are included in the analyses. Eight monophyletic groups including two or more genera were identified in the tree calculated from the combined data matrix. Three of the groups cover almost half of the species of the family. The largest and strongest supported group includes seven genera with their distribution centres in the Southern Hemisphere: Almbornia, Chondropsis, Karoowia, Namakwa, Neofuscelia, Xanthomaculina and Xanthoparmelia. The second group is a clade of four essentially tropical genera: Concamerella, Flavoparmelia, Parmotrema and Rimelia. The third large group with strong support is the core of cetrarioid lichens, distributed primarily in cold areas of the Northern Hemisphere. The genus Parmelia sensu Hale is not closely related with most of its segregates. One new combination, Cetrariella commixta, is proposed. Coelopogon abraxas is reported from South America for the first time.     

<Emphasis Type="Italic">Galactia dimorphophylla</Emphasis> (Leguminosae: Phaseoleae), a new species from southeastern South America

Galactia dimorphophylla, a new species from northeastern Argentina and northern Uruguay, is described and illustrated. This new species is assigned to sect. Odonia. A table distinguishing it from similar species in Southern South America is presented, and its relationships and distinguishing characters including karyological features are discussed.     

Mitochondrial and nuclear phylogenies of Cervidae (Mammalia, Ruminantia): Systematics, morphology, and biogeography

The family Cervidae includes 40 species of deer distributed throughout the northern hemisphere, as well as in South America and Southeast Asia. Here, we examine the phylogeny of this family by analyzing two mitochondrial protein-coding genes and two nuclear introns for 25 species of deer representing most of the taxonomic diversity of the family. Our results provide strong support for intergeneric relationships. To reconcile taxonomy and phylogeny, we propose a new classification where the family Cervidae is divided in two subfamilies and five tribes. The subfamily Cervinae is composed of two tribes: the tribe Cervini groups the genera Cervus, Axis, Dama, and Rucervus, with the Père David's deer (Elaphurus davidianus) included in the genus Cervus, and the swamp deer (Cervus duvauceli) placed in the genus Rucervus; the tribe Muntiacini contains Muntiacus and Elaphodus. The subfamily Capreolinae consists of the tribes Capreolini (Capreolus and Hydropotes), Alceini (Alces), and Odocoileini (Rangifer + American genera). Deer endemic to the New World fall in two biogeographic lineages: the first one groups Odocoileus and Mazama americana and is distributed in North, Central, and South America, whereas the second one is composed of South American species only and includes Mazama gouazoubira. This implies that the genus Mazama is not a valid taxon. Molecular dating suggests that the family originated and radiated in central Asia during the Late Miocene, and that Odocoileini dispersed to North America during the Miocene/Pliocene boundary, and underwent an adaptive radiation in South America after their Pliocene dispersal across the Isthmus of Panama. Our phylogenetic inferences show that the evolution of secondary sexual characters (antlers, tusk-like upper canines, and body size) has been strongly influenced by changes in habitat and behaviour.     

Oligochaetes (Naididae,Tubificidae, Enchytraeidae and Alluroididae) of Guyana,Peru and Ecuador

More than 41 species in 23 genera of the microdrile oligochaete families Tubificidae, Naididae, Opistocystidae, and Enchytraeidae and the freshwater megadrile family Alluroididae have been identified in recent collections made in Peru, Guyana and Ecuador. Just less than 70% of our species records are new for one or more of these countries and one is a new, albeit tentative, generic record for the South American continent. About 16 species new to science remain to be described. One of these is only the second reported species of Brinkhurstia (Alluroididae) and possesses unusual, single, very elongate penial setae. All of our species records are pertinent to tests of different hypotheses about historical and phylogenetic relationships among organisms of northern and southern South America and North America. The species, including new ones, with limited distributions are of particular significance to such hypotheses.     

Trichodinidae in commercial fish in South America

Ciliates of the family Trichodinidae are protozoan parasites of importance for fish farming in South America, given that at high infestation levels, they cause significant mortality among farmed fish. Although data on economic losses due to parasitosis are not available for South America, mortality outbreaks correlated to trichodinids are very common in the tilapia production chain, especially in Brazil, the largest aquaculture chain in the country. In Brazil in the past, trichodinids were considered only as Trichodina sp. Today, they have been better studied and identified taxonomically in wild and farmed fish. However, in other countries in South America, trichodinids continue to be described only as Trichodina sp. This review presents the history of occurrences of trichodinids in fish of interest in South America, highlighting 15 new species that have been described in three genera in Brazil, along with information on parasite-host-environment relationships, diagnostic methods and treatments. The occurrence of parasitic ciliates must be correlated with farming conditions such as stress factors, water quality, seasonality, age and host immunity to elucidate the critical points of each production system. Furthermore, for tropical fish, studies on treatment against trichodinid species are needed to provide support for approval of antiparasitic medications for use in fish farming. However, it is recommended that the production sector use intensive production systems that are more sustainable, with biosafety protocols, to increase production and productivity.     

Morphological and molecular description of new species of squat lobster (Crustacea: Decapoda: Galatheidae) from the Solomon and Fiji Islands (South‐West Pacific)

The family Galatheidae is among the most diverse families of anomuran decapod crustaceans, and the South‐West Pacific is a biodiversity hot spot for these squat lobsters. Attempts to clarify the taxonomic and evolutionary relationships of the Galatheidae on the basis of morphological and molecular data have revealed the existence of several cryptic species, differentiated only by subtle morphological characters. Despite these efforts, however, relationships among genera are poorly understood, and the family is in need of a detailed systematic review. In this study, we assess material collected in different surveys conducted in the Solomon Islands, as well as comparative material from the Fiji Islands, by examining both the morphology of the specimens and two mitochondrial markers (cytochrome oxidase subunit I, COI, and 16S rRNA). These two sources of data revealed the existence of eight new species of squat lobster, four of which were ascribed to the genus Munida, two to the genus Paramunida, one to the genus Plesionida, and the last species was ascribed to the genus Agononida. These eight species are described along with phylogenetic relationships at the genus level. Our findings support the taxonomic status of the new species, yet the phylogenetic relationships are not yet fully resolved. Further molecular analysis of a larger data set of species, and more conserved genes, will help clarify the systematics of this group. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 156 , 465–493.     

An integrative approach for species delimitation in the spider genus Grammostola (Theraphosidae,Mygalomorphae)

The mygalomorph genus Grammostola (family Theraphosidae) is endemic to South America. The species Grammostola anthracina is one of the largest spiders in Uruguay and reputed to be the longest lived tarantula in the world. This nominal species has two distinct colour morphs comprising black and reddish‐brown forms with controversial taxonomic status. Here, we present a phylogenetic study based on molecular characters (cytochrome c oxidase subunit I) of haplotypes of G. anthracina and closely related species. Our analysis together with new morphological data and biogeographical information indicates that the two morphs of G. anthracina constitute different species that are not sister to each other. Consequently, a new species, Grammostola quirogai is described, diagnosed and illustrated to encompass the black morph. Phylogenetic relationships and new taxonomic characters for Grammostola species included in this study are discussed.     

A new species of Acanthosyris (Santalaceae) from Bolivia and a key to the woody South American Santalaceae

Acanthosyris asipapote, a new species from the vicinity of Santa Cruz, Bolivia, is described and illustrated. It is most similar to A. paulo-alvinii Barroso, known only from the state of Bahia, Brazil, but differs by leaf characters, pilose filaments, and smaller seeds. A key to the five woody genera and nine species of Santalaceae in South America is provided. Cervantesia, Jodina, and Myoschilos are probably monotypic; Santalum (in South America) has a single species, and Acanthosyris has five species.     

STUDIES OF PACIFIC ISLAND PLANTS. XXIX. BLEASDALEA AND RELATED GENERA OF PROTEACEAE

The genus Kermadecia (Proteaceae), originally described as endemic to New Caledonia, has been expanded in recent decades to include three species from the New Hebrides and Fiji. Specialists on the Proteaceae have suggested that the three Melanesian species were generically misplaced, and careful reexamination supports this viewpoint. It is now apparent that a distinct group within the subfamily Grevilleoideae is composed of the genera Euplassa (endemic to South America), Sleumerodendron (a monotypic New Caledonian genus), Gevuina (based on a single South American species but recently expanded to include two other species from Queensland and New Guinea), and the three questionable Melanesian species. A review of this cluster of taxa indicates that Gevuina should again be interpreted as restricted to South America and that the generic name Bleasdalea F. v. Muell. ex Domin should be adopted for a group of five species extending from Queensland and New Guinea to the New Hebrides and Fiji. The relationships of the four genera are discussed and within Bleasdalea four new combinations are proposed: B. bleasdalei (F. v. Muell.), B. ferruginea (A. C. Sm.), B. vitiensis (Turrill), and B. lutea (Guillaumin). Kermadecia, very distinct from the four genera under present consideration, is again interpreted as a New Caledonian endemic.     

Systematic significance of achene morphology in Soroseris,Syncalathium and Parasyncalathium (Asteraceae: Cichorieae)

The systematic significance of the morphological structure of achenes in the Himalayan–Tibetan Plateau endemic genera Soroseris, Syncalathium and Parasyncalathium is described and discussed. The achene surface sculpturing of 15 samples representing 13 species of the three genera was investigated using scanning electronic microscopy (SEM) to evaluate inter‐ and intrageneric relationships of the three genera. Characters such as cell arrangement, shape of the epidermis, type of ornamentation of the outer cell wall and degree of wax development are described. The results show that characters such as the shape of the epidermis and the type of ornamentation of the outer cell wall are distinct between the three genera and useful for species‐level classification. Parasyncalathium souliei differs from Syncalathium, in which it has traditionally been placed, in the short, stout beak of the achene and especially in the obscure outline of the epidermal cells and their long acuminate, steeple‐like, end walls. Combined with karyological and molecular data, the differences in achene morphology and sculpturing further support our recognition of Parasyncalathium as distinct from Syncalathium. The achene characters are not only useful for assessing relationships, but are also useful for delimiting species. © 2013 The Linnean Society of London, Botanical Journal of the Linnean Society, 2013, 173 , 476–486.     

Phylogeny, classification, and biogeography of the cycloteline Therevinae (Insecta: Diptera: Thereavidae)

Twenty-one members of the Laurasian group of Therevinae (Diptera: Therevidae) are compared using 65 adult morphological characters. Cladistic analysis using parsimony on the 17 ingroup and 4 outgroup taxa provides a well-supported hypothesis of relationships among taxa within the Gyclotelini, tribe nov. The Cyclotelini is a monophyletic assemblage of mostly New World genera, including Anolinga , gen. nov. , Breviperna Irwin, Coleiana , gen. nov. , Crebraseta , gen. nov. , Cyclotelus Walker, Mesonana , gen.nov. , and Ozodiceromyia Bigot. In addition, three Old World genera, Ammothereva Lyneborg, Bugulaverpa , gen. nov. , and Procyclotelus Nagatomi & Lyneborg, are included in the tribe. These ten genera are divided into two monophyletic genus-groups, the Brevipema-group and the Cyclotelus-group. Keys are provided for the genera of Cyclotelini. The tribe, the two informal genus-groups, and all genera are diagnosed; five new genera and six new species are proposed. The biogeographical histories of the genera are discussed in terms of their cladistic relationships using methods of cladistic biogeography. Two major vicariant events account for the current distribution of the tribe. The first relates to the Beringian land bridge connecting western North America and eastern Asia. Second, New World cyclotelines were profoundly affected by the Early Eocene breakup of the archipelagic bridge between North and South America, and the distributions support the hypotheses favouring the continental origin of the Greater Antilles.     

Phylogeny of haplo–diploid,fungus‐growing ambrosia beetles (Curculionidae: Scolytinae: Xyleborini) inferred from molecular and morphological data

Cognato, A. I., Hulcr, J., Dole, S. A. & Jordal, B. H. (2010). Phylogeny of haplo‐diploid, fungus‐growing ambrosia beetles (Curculionidae: Scolytinae: Xyleborini) inferred from molecular and morphological data. —Zoologica Scripta, 40, 174–186. The ambrosia beetle tribe Xyleborini currently contains 30 genera and approximately 1200 species which are distributed throughout worldwide forests with most diversity located in the tropics. They also represent the most invasive scolytines in North America. Despite economic concerns and biological curiosity with this group, a comprehensive understanding of generic boundaries and the evolutionary relationship among species is lacking. In this study, we include 155 xyleborine species representing 23 genera in parsimony and Bayesian analyses using 3925 nucleotides from mitochondrial (COI) and nuclear genomes (28S, ArgK, CAD, EF‐1α) and 39 morphological characters. The phylogenies resulting from the parsimony analyses, which treated gap positions either as missing or fifth character states, and the Bayesian analysis were generally similar. Clades with high support or posterior probabilities were found in all trees, while those with low support were not recovered by all analyses. Fourteen of the 23 genera were monophyletic although not all relationships among the genera were resolved. We show monophyly of several species groups associated with particular morphological and biological characters and suggest recognition of these groups as genera. Most interesting was the monophyly of South and Central American species representing several genera. This finding suggests recent and fast radiation of xyleborines in the New World accompanied by morphological and biological diversification.     

Fissidens viridulus Wahlenb. and F. minutulus Sull.

Abstract

A new species of Pseudocrossidium R.S.Williams, P. exiguum M.J.Cano &; J.A.Jiménez, is described from South America (Argentina, Brazil and Peru). The species is distinguished morphologically by its lingulate to oblong-ovate leaves, leaf marginal cells not or scarcely differentiated from inner, costa ending below apex or percurrent, and semicircular to elliptical in cross-section with two guide cells, scarcely differentiated perichaetial leaves and peristome of short and straight teeth. Drawings and light microscope photographs of the new species are provided. The principal distinctive characters that separate it from the nearest species of Pseudocrossidium and related genera are discussed.     

A review of the Pterogeniidae (Goleoptera)

The Pterogeniidae, a family of beetles from Indoaustralia, are revised. They comprise five genera and 24 species. Three genera and 17 species are described as new and one species is synonymized. It is shown that the male and particularly the female genitalia provide useful means for species definition. The phylogenetic relationships are discussed based on a cladistic analysis of 23 morphological characters using PAUP. The analysis resulted in a single cladogram with following grouping: ( Kryptogenius + ( Tychogenius + ( Katagenius + ( Plerogenins + Histanocerus )))). For rooting the cladogram and polarizing the characters, Sivacrypticus indicus (Archeocrypticidae) was used as an outgroup. The majority of the species is restricted to insular tropical Asia and Oceania but four of them extend their range onto the Malayan Peninsula. Another four species are known only from continental Asia, i.e. two species from South India and one each from Malayan Peninsula and Vietnam respectively. Species of Kryptogenius, Pterogenius, Katagenius and Tychogenius are highly endemic and could therefore potentially be useful for analysing areas of endemism. For this, however, the cladistic relationships should be resolved at species level. Species of Histanocerus are more widely distributed but none is found on both sides of Wallace's line.     

姜科植物地理

本文讨论了姜科的分类系统、起源、进化和地理分布．姜科为一还热带分布科,按Ｂｕｒｔｔ［８］的系统分２亚科４族．全世界有５２属,约１３７７种,其中姜亚科含４８属,１２６８种．主要分布于热带亚洲．其现代分布中心在印度－马来西亚。闭鞘姜亚科含４属,１０９种,主要分布于热带美洲及非洲。本文在化石资料及现代分布资料的基础上,讨论了姜科的早期分化时间、地点及现代分布格局形成。化石记录表明．欧洲、北美及印度的白垩纪、早第三纪均发现过姜科的化石,据此姜科植物的起源时间应不晚于早白垩纪。姜亚科的早期分化中心推论在劳亚古陆的南部．欧洲和北美没有现代姜科的分布是因为第三纪冰期的影响．而亚洲热带地区现代姜科植物繁盛是因为气候适宜．且相对稳定所致．南美的姜亚科种类应是由非洲传人．而大洋洲的姜亚科种类则是由马来西亚传入．闭鞘姜亚科的早期分化中心推论在西冈瓦纳古陆．亚洲及大洋洲的闭鞘姜亚科的种类应是随印度板块飘向亚洲时传入。中国姜科植物有２２属．２０９种（占全世界属的４２％．种的１５％）．主要分布于马来西亚亚区（占全国属的９０％）．其次为中国喜马拉雅亚区（占全国属的６８％）。最少为中国－日本亚区（占全国属的４５％）。统计数字表明．马来西亚     

木兰科（Magnoliaceae）的起源、进化和地理分布

木兰科为亚洲－美洲间断分布科,全世界有１５属,２４６种,主要分布于亚洲东南部的热带、亚热带地区,从喜马拉雅至日本,向南达新几内亚及新不列颠;少数种类分布于北美东南部、中美至南美巴西．中国有１１属,约９９种．木兰科的现代分布中心在东亚－东南亚地区．根据木兰科的化石记录、系统发育和现代分布,推测其起源时间为早白垩纪,甚至更早．起源地可能在中国的西南地区,并由此向外辐射,向东经日本、俄罗斯远东地区经白令陆桥进入北美;向西经西亚、欧洲,通过格陵兰进入北美,然后到达南美;向南经印度支那、马来西亚,直至新几内亚．东亚－北美间断分布的形成是受第四纪冰期的影响;南美的木兰科是从北美迁移而来．     

木兰科（Magnoliaceae）的起源、进化和地理分布

木兰科为亚洲－美洲间断分布科,全世界有１５属,２４６种,主要分布于亚洲东南部的热带、亚热带地区,从喜马拉雅至日本,向南达新几内亚及新不列颠;少数种类分布于北美东南部、中美至南美巴西．中国有１１属,约９９种．木兰科的现代分布中心在东亚－东南亚地区．根据木兰科的化石记录、系统发育和现代分布,推测其起源时间为早白垩纪,甚至更早．起源地可能在中国的西南地区,并由此向外辐射,向东经日本、俄罗斯远东地区经白令陆桥进入北美;向西经西亚、欧洲,通过格陵兰进入北美,然后到达南美;向南经印度支那、马来西亚,直至新几内亚．东亚－北美间断分布的形成是受第四纪冰期的影响;南美的木兰科是从北美迁移而来．