Population structure within an alpine archipelago: strong signature of past climate change in the New Zealand rock wren (Xenicus gilviventris)

Naturally subdivided populations such as those occupying high‐altitude habitat patches of the ‘alpine archipelago’ can provide significant insight into past biogeographical change and serve as useful models for predicting future responses to anthropogenic climate change. Among New Zealand's alpine taxa, phylogenetic studies support two major radiations: the first correlating with geological forces (Pliocene uplift) and the second with climatic processes (Pleistocene glaciations). The rock wren (Xenicus gilviventris) is a threatened alpine passerine belonging to the endemic New Zealand wren family (Acanthisittidae). Rock wren constitute a widespread, naturally fragmented population, occurring in patches of suitable habitat over c. 900 m in altitude throughout the length of the South Island, New Zealand. We investigated the relative role of historical geological versus climatic processes in shaping the genetic structure of rock wren (N = 134) throughout their range. Using microsatellites combined with nuclear and mtDNA sequence data, we identify a deep north–south divergence in rock wren (3.7 ± 0.5% at cytochrome b) consistent with the glacial refugia hypothesis whereby populations were restricted in isolated refugia during the Pleistocene c. 2 Ma. This is the first study of an alpine vertebrate to test and provide strong evidence for the glacial refugia hypothesis as an explanation for the low endemicity central zone known as the biotic ‘gap’ in the South Island of New Zealand.     

Use of ISSR profiles and ITS-sequences to study the biogeography of alpine cushion plants in the genus Raoulia (Asteraceae)

Nuclear ITS sequences and ISSR profiles provide evidence that Raoulia rubra is endemic to the Tararua Range in the southern part of the North Island of New Zealand. Populations in the South Island previously ascribed to R. rubra are better ascribed to R. eximia. Our findings suggest that glaciation of the central mountains of the South Island during the last ice age have had a major impact on the evolution of the South Island cushion Raoulia species in New Zealand. However, simple hypotheses accounting for the effect of Pleistocene climate change are insufficient to explain patterns of endemism in the group.     

Phylogeography and ecological niche modelling implicate coastal refugia and trans‐alpine dispersal of a New Zealand fungus beetle

The Last Glacial Maximum (LGM) severely restricted forest ecosystems on New Zealand’s South Island, but the extent of LGM distribution for forest species is still poorly understood. We used mitochondrial DNA phylogeography (COI) and ecological niche modelling (ENM) to identify LGM refugia for the mycophagous beetle Agyrtodes labralis (Leiodidae), a forest edge species widely distributed in the South Island. Both the phylogenetic analyses and the ENM indicate that A. labralis refuged in Kaikoura, Nelson, and along much of the South Island’s west coast. Phylogeography of this species indicates that recolonization of the largely deforested east and southeast South Island occurred in a west–east direction, with populations moving through the Southern Alps, and that the northern refugia participated little in interglacial population expansion. This contradicts published studies of other New Zealand species, in which recolonization occurs in a north–south fashion from many of the same refugia.     

Orthoglymma wangapeka gen.n., sp.n. (Coleoptera: Carabidae: Broscini): a newly discovered relict from the Buller Terrane,north‐western South Island,New Zealand,corroborates a general pattern of Gondwanan endemism

Orthoglymma Liebherr, Marris, Emberson, Syrett & Roig‐Juñent gen.n. (Coleoptera: Carabidae: Broscini) is described to accommodate the single type species Orthoglymma wangapeka Liebherr, Marris, Emberson, Syrett & Roig‐Juñent sp.n., known from the Wangapeka Track, Kahurangi National Park, north‐western South Island, New Zealand. Orthoglymma wangapeka sp.n. is analysed cladistically along with a comprehensive array of 42 other broscine generic terminals and four out‐group taxa, using information obtained from 73 morphological characters, and placed as adelphotaxon to the remainder of subtribe Nothobroscina, a clade distributed in New Zealand, southern South America and Australia. Based on fossil evidence for Carabidae, the occurrence of Orthoglymma wangapeka sp.n. on the Buller Terrane, a geological feature once situated on the eastern margin of Gondwana, and early cladistic divergence of Orthoglymma from the remaining Nothobroscina, Orthoglymma wangapeka sp.n. is interpreted as a Gondwanan relict. The New Zealand arthropod fauna is reviewed to identify other taxa in existence at the time of Cretaceous vicariance of New Zealand and Australia. These candidate Gondwanan taxa, all of which are specified using fossil data or molecular divergence‐based estimates, are analysed biogeographically. Where phylogenetic hypotheses are available, primordial distributions are optimized using event‐based, dispersal‐vicariance (DIVA) analysis. The hypothesized Gondwanan‐aged taxa demonstrate inordinate fidelity to the Gondwanan‐aged geological terranes that constitute the western portions of New Zealand, especially in the South Island. Persistence of these relicts through a hypothesized ‘Oligocene drowning’ event is the most parsimonious explanation for the concentration of Gondwanan relicts in the Nelson, Buller and Fiordland districts of the South Island. Geographic patterns of Gondwanan‐aged taxa are compared with distributions of taxa hypothesized to have colonized New Zealand across the Tasman Sea from Australia and New Caledonia, subsequent to Cretaceous vicariance. These post‐Gondwanan taxa exhibit very different patterns of distribution and diversification in New Zealand, including: (i) abundant endemism in Northland, and the islands and peninsulas of the North Island; (ii) species geographically restricted to areas underlain by the youngest Rakaia and Pahau geological terranes; and (iii) species exhibiting exceedingly widespread geographic distributions spanning geological terranes of disparate ages.

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Phylogeny, biogeography and adaptive radiation of Pachycladon (Brassicaceae) in the mountains of South Island, New Zealand

Aim To report analyses and propose hypotheses of adaptive radiation that explain distributional patterns of the alpine genus Pachycladon Hook.f. – a morphologically diverse genus from New Zealand closely related to Arabidopsis thaliana. Location South Island, New Zealand. Methods Morphological and nrDNA ITS sequence phylogenies were generated for Pachycladon. An analysis is presented of species distributional patterns and attributes. Results Phylogenetic analyses of morphological characters and nrDNA ITS sequence data were found to be congruent in supporting three New Zealand clades for Pachycladon. Monophyletic groups identified within the genus are geographically distinct and are associated with different geological parent materials. Distribution maps, latitude and altitude range, and data on geological parent material are presented for the nine named and one unnamed species of Pachycladon from New Zealand. Main conclusions (a) Panbiogeographic hypotheses accounting for the origin and present‐day distribution of Pachycladon in New Zealand are not supported.
(b) Species diversity and distributions of Pachycladon are explained by a Late Tertiary–Quaternary adaptive radiation associated with increasing specialization to geological substrates. Pachycladon cheesemanii Heenan & A.D.Mitch. is morphologically similar to the closest overseas relatives. It is a geological generalist and has wide latitudinal and altitudinal ranges, and we suggest it resembles the ancestral form of the genus in New Zealand. Pachycladon novae‐zelandiae (Hook.f.) Hook.f. and P. wallii (Carse) Heenan & A.D.Mitch. are a southern South Island group that predominantly occurs on Haast Schist, are polycarpic, have lobed leaves, and lateral inflorescences. Pachycladon enysii (Cheeseman) Heenan & A.D.Mitch., P. fastigiata (Hook.f.) Heenan & A.D.Mitch., and P. stellata (Allan) Heenan & A.D.Mitch. are restricted to greywacke in the eastern South Island, and are facultatively monocarpic, have serrate leaves, and stout terminal inflorescenes.
(c) Present distributions of Pachycladon species may relate to Pleistocene climate change. Pachycladon enysii reaches the highest altitude of New Zealand species of Pachycladon and is most common in the Southern Alps in Canterbury. We propose that this species survived on nunataks at the height of the last glaciation. In contrast, P. fastigiata grows at a lower altitude and is absent from the high mountains of the Southern Alps. We suggest it was extirpated from this area during the last glaciation.     

BRIDGING THE "BEECH-GAP": NEW ZEALAND INVERTEBRATE PHYLOGEOGRAPHY IMPLICATES PLEISTOCENE GLACIATION AND PLIOCENE ISOLATION

Abstract The existence of areas of lower endemism and disjunction of New Zealand biota is typified by Nothofagus beech trees (hence “beech‐gap”) and have been attributed to a variety of causes ranging from ancient fault‐mediated displacement (20–25 million years ago) to Pleistocene glacial extirpation (<1.8 million years ago). We used cytochrome oxidase I and 12S mtDNA sequence data from a suite of endemic invertebrates to explore phylogeographic depth and patterns in South Island, New Zealand, where the “beech‐gap” occurs. Phylogeographic structure and genetic distance data are not consistent with ancient vicariant processes as a source of observed pattern. However, we also find that phylogeographic patterns are not entirely congruent and appear to reflect disparate responses to fragmentation, which we term “gap,”“colonization,” and “regional.” Radiations among congenerics, and in at least one instance within a species, probably took place in the Pliocene (2–7 million years ago), possibly under the influence of the onset of mountain building. This orogenic phase may have had a considerable impact on the development of the biota generally. Some of the taxa that we studied do not appear to have suffered range reduction during Pleistocene glaciation, consistent with their survival throughout that epoch in alpine habitats to which they are adapted. Other taxa have colonized the beech‐gap recently (i.e., after glaciation), whereas few among our sample retain evidence of extirpation in the most heavily glaciated zone.     

The Alpine Fault biogeographic hypothesis revisited

The New Zealand Alpine Fault is a major tectonic feature located on the mutual boundary of the Australian and Pacific Plates which is hypothesized to have undergone some 470 km of right‐lateral displacement. The Nelson and Westland provinces have moved north‐east relative to the rest of the South Island. Many plant and animal taxa show a conspicuous distribution gap in the central South Island, and traditionally this has been explained by glacial extirpation of the central populations. However, the gap is usually filled by a closely related taxon. Furthermore, the taxa involved occupy a wide ecological range, and include intertidal algae, shorefishes, lowland trees, and alpine herbs and insects that thrive around glaciers. The Alpine Fault biogeographic hypothesis [ Heads, M., 1998a . Biogeographic disjunction along the Alpine Fault, New Zealand. Biol. J. Linn. Soc. 63, 161–176; Heads, M., 1998b. Coprosma decurva (Rubiaceae), a new species from New Zealand. NZ J. Bot. 36, 65–69.], based on track and phylogenetic analyses, proposes that the disjunction has instead been caused by movement on the fault pulling apart plant and animal populations. Wallis and Trewick (2001 ) [ Wallis, G.P., Trewick, S.A., 2001 . Finding fault with vicariance: a critique of Heads (1998). Syst. Biol. 50, 602–609.] provided a critique of this idea and pointed out what they felt were nine problems with it. These problems are answered here and shown to result from Wallis and Trewick's misunderstanding of aspects of geology and biology involved in the hypothesis. In particular, they have confused the age of inception of the fault with the age of movement along it, and, by neglecting the related central taxa in the “gap”, have assumed the biogeographic hypothesis to be an uninformative two‐area statement, whereas in fact it is an informative three‐ or four‐area statement.     

Genetic divergence of three freshwater isopod species from southern New Zealand

Aim We examined the biogeography of three freshwater isopod species (Austridotea annectens, A. lacustris, A. benhami), and tested the hypotheses that genetic differences would: (1) exist between geographic locations; and (2) correspond to known geological events (e.g. appearance of islands leading to the availability of habitat). Location Southern New Zealand, including South Island, Stewart Island, Campbell Island and Chatham Islands. Methods We examined specimens throughout the known species range from 12 populations of A. lacustris, five populations of A. annectens, and three populations of A. benhami, using mitochondrial DNA (cytochrome c oxidase I) sequence analyses. Results We resolved three main clades corresponding to the three species, with 16% sequence divergence between A. annectens and A. benhami, and 31% divergence between these species and A. lacustris. Divergence within A. benhami was < 2.0%. However, divergence within A. lacustris reached up to 10% with four main groupings: (1) Chatham Islands; (2) Campbell Island; (3) Fiordland; and (4) east coast South Island and Stewart Island. Divergence within A. annectens reached up to 4.4%, with two main groupings: (1) Chatham Islands and (2) east coast South Island and Stewart Island. Patterns of genetic divergence were most likely the result of geographical isolation among A. lacustris and A. annectens populations. In particular, the divergence of A. lacustris and A. annectens on Chatham Islands may correspond to the availability of this habitat c. 4 Ma, whereas the divergence of A. lacustris on the much older Campbell Island and in Fiordland may indicate either a rare founder event or a change in ocean circulation that resulted in their isolation from a once more widespread gene pool. Main conclusions The three New Zealand species of Austridotea are genetically distinct, with up to 31% divergence between species. Genetic variability was highest between populations of the two most widely distributed species, and divergence was greatest on islands distant from mainland New Zealand and in the discrete Fiordland region. The magnitude of genetic divergence of isopods on the Auckland and Chatham Islands is consistent with these populations having been founded in the Pliocene via oceanic dispersal from mainland New Zealand.     

Altitudinal distribution of the entire invasive small mammal guild in the eastern dryland zone of New Zealand’s Southern Alps

New Zealand faces significant ecological problems caused by the introduction of a variety of invasive small mammal species. Many of these species originate from temperate to subarctic climates and occur across wide elevations in their native range, and so arrived predisposed to adapt to a variety of habitats and bioclimatic zones in their new environs, including the alpine zone. Almost all of New Zealand’s invasive small mammal species have been recorded in the country’s alpine zones, yet neither the altitudinal distribution nor the extent to which such species use high elevation areas has been clearly defined. We conducted extensive camera trap surveys in summer to autumn periods of 2019 and 2020 across an elevation range of 500–2250 m above sea level, and used detection rates and occupancy modelling to reveal the altitudinal distributions and habitat associations of all 10 invasive small mammals that occur in the dryland zone of the central South Island. We found altitudinal distributions varied greatly across species, and that while most exhibited decreasing detection rates and site occupancy probabilities with increasing elevation, some used the subalpine and alpine zones to a greater degree than adjacent lower elevations. There were clear habitat associations, as well as interspecific associations that helped to explain the altitudinal distribution of some species. Understanding how such factors influence the distribution of invasive small mammals has both broad implications for invasive species management, and direct applications in evaluating threats to native taxa, advancing management strategies, and benchmarking distributions in a changing climate.

     

Extinction and endemism in the New Zealand avifauna

Aim Species belonging to higher taxa endemic to islands are more likely to go extinct following human arrival. This selectivity may occur because more highly endemic island species possess features that make them uniquely vulnerable to impacts associated with human arrival, specifically: (1) restricted distribution (2) reduced predator escape response, including loss of flight, and (3) life history traits, such as large body mass, associated with greater susceptibility to hunting or habitat loss. This study aims to identify which of these features can explain the selective extinction of more highly endemic bird species in New Zealand. Location North and South Island, New Zealand. Methods Bird species breeding in New Zealand prior to human arrival were classified according to whether they became extinct or not during two periods of human settlement, prehistoric (post‐Maori but pre‐European arrival) and historic (post‐European arrival). We modelled the relationships between extinction probability, level of endemism and life history traits in both periods. Results The prehistoric extinction–endemism relationship can be explained entirely by the selective extinction of large‐bodied species, whereas the historic extinction–endemism relationship appears due to increased susceptibility to introduced predators resulting from the loss of predator escape responses, including loss of flight. Conclusions These features may explain extinction–endemism relationships more generally, given that human hunting and predator introductions are major impacts associated with human arrival on islands.     

Closing the gap: Avian lineage splits at a young,narrow seaway imply a protracted history of mixed population response

The evolutionary significance of spatial habitat gaps has been well recognized since Alfred Russel Wallace compared the faunas of Bali and Lombok. Gaps between islands influence population structuring of some species, and flightless birds are expected to show strong partitioning even where habitat gaps are narrow. We examined the population structure of the most numerous living flightless land bird in New Zealand, Weka (Gallirallus australis). We surveyed Weka and their feather lice in native and introduced populations using genetic data gathered from DNA sequences of mitochondrial genes and nuclear β‐fibrinogen and five microsatellite loci. We found low genetic diversity among extant Weka population samples. Two genetic clusters were evident in the mtDNA from Weka and their lice, but partitioning at nuclear loci was less abrupt. Many formerly recognized subspecies/species were not supported; instead, we infer one subspecies for each of the two main New Zealand islands. Although currently range restricted, North Island Weka have higher mtDNA diversity than the more wide‐ranging southern Weka. Mismatch and neutrality statistics indicate North Island Weka experienced rapid and recent population reduction, while South Island Weka display the signature of recent expansion. Similar haplotype data from a widespread flying relative of Weka and other New Zealand birds revealed instances of North Island—South Island partitioning associated with a narrow habitat gap (Cook Strait). However, contrasting patterns indicate priority effects and other ecological factors have a strong influence on spatial exchange at this scale.     

East meets west: biogeology of the Campbell Plateau

The New Zealand Subantarctic Islands, emergent remnants of the Campbell Plateau, were given World Heritage status in 1998 in recognition of their importance to global biodiversity. We describe the flora and fauna of these islands and discuss the results of recent phylogenetic analyses. Part of the New Zealand Subantarctic biota appears to be relictual and to be derived from west Gondwana. The relictual element is characterized by genera endemic to the Campbell Plateau that show relationships with taxa of the southern South Island, New Zealand, southern South America, and the north Pacific. In contrast, a younger, east Gondwanan element is composed of species that are either taxonomically identical to widespread mainland species, or endemic species with close New Zealand relatives. Area cladograms support the inclusion of the southern South Island, New Zealand and Macquarie Island (although this is separate geologically) as parts of the Campbell Plateau, but suggest the Chatham Rise and Torlesse terranes of the eastern South Island, New Zealand were originally parts of east Gondwana. East and west Antarctica acted as independent plates during the breakup of Gondwana, and were separated by oceanic crust until a compressive phase sutured them along the trace of the trans‐Antarctic mountains during the early Tertiary. The Campbell Plateau microcontinent was connected to west Antarctica until its separation at 80 Mya, contemporaneous with the separation of the southern portion of the Melanesian rift from east Gondwana. Presently the Campbell Plateau is joined to the Melanesian Rift along the Alpine Fault. Cenozoic plate tectonic reconstructions place the Campbell Plateau adjacent to the Melanesian Rift throughout the rift–drift phase, relative motion being confined to strike–slip movement over the last 20 Myr. Our synthesis of phylogenetic and plate tectonic evidence suggests that the Alpine Fault is the most recent development of a much older extensional rift/basin boundary originally separating west and east Gondwana. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 86 , 95–115.     

Historical biogeography of Australian Rhamnaceae, tribe Pomaderreae

Aim To discover the pattern of relationships of areas of endemism for Australian genera in the plant family Rhamnaceae tribe Pomaderreae for comparison with other taxa and interpretation of biogeographical history. Location Australian mainland, Tasmania and New Zealand. Methods A molecular phylogeny and geographic distribution of species within four clades of Pomaderreae are used as a basis for recognition of areas of endemism and analysis of area relationships using paralogy‐free subtrees. The taxon phylogeny is the strict consensus tree from a parsimony analysis of 54 taxa, in four clades, and sequence data for the internal transcribed spacer regions of ribosomal DNA (ITS1‐5.8S‐ITS2) and the plastid DNA region trnL‐F. Results The biogeographical analysis identified five subtrees, which, after parsimony analysis, resulted in a minimal tree with 100% consistency and seven resolved nodes. Three sets of area relationships were identified: the areas of Arnhem and Kimberley in tropical north Australia are related based on the phylogeny of taxa within Cryptandra; the moister South‐west of Western Australia, its sister area the coastal Geraldton Sandplains, the semi‐arid Interzone region and arid Western Desert are related, based on taxa within Cryptandra, Spyridium, Trymalium and Pomaderris; and the eastern regions of Queensland, McPherson‐Macleay, south‐eastern New South Wales (NSW), Victoria, southern Australia, Tasmania and New Zealand are related based on Cryptandra, Pomaderris and Spyridium. Tasmania and NSW are related based entirely on Cryptandra, but the position of New Zealand relative to the other south‐eastern Australian regions is unresolved. Main conclusions The method of paralogy‐free subtrees identified a general pattern of geographic area relationships based on Australian Pomaderreae. The widespread distribution of clades, the high level of endemicity and the age of fossils for the family, suggest that the Pomaderreae are an old group among the Australian flora. Their biogeographical history may date to the early Palaeogene with subsequent changes through to the Pleistocene.     

Phylogeography reveals a North Island range extension for New Zealand's only sexually wing-dimorphic stonefly (Stenoperla helsoni)

Stenoperla helsoni is an endemic New Zealand stonefly characterised by distinctive sexually dimorphic wing loss. Previous distribution records indicated that this species was restricted to the South Island's Southern Alps, although our recent collections of wing-reduced specimens from a site in the Tararua Ranges suggest that this species may extend into the lower North Island. We amplified the mitochondrial COI gene to confirm the identity of North Island specimens, and to assess phylogeographic structuring within the species and genus. North Island specimens were confirmed as S. helsoni, indicating that this species has a much wider geographic range than previously thought. This broad distribution, combined with low levels of intraspecific divergence, suggests that female S. helsoni may be strong fliers, despite males being flightless. Distinct North Island and South Island populations were identified, with a 1.5% divergence between the two populations.     

Cephaloziella tahora Bever. & Glenny,a new species of Cephaloziella (Jungermanniopsida,Cephaloziellaceae) from eastern Taranaki,New Zealand

Cephaloziella tahora, a new species of Cephaloziella is described and illustrated from a lowland forest habitat in eastern Taranaki in the North Island of New Zealand. It has similarities to six other New Zealand species of Cephaloziella, and appears closest in New Zealand to Cephaloziella aenigmatica R.M.Schust. It is defined by a unique combination of features and distinguished from C. aenigmatica and other New Zealand species by having entire, distant leaves that reach the dorsal stem mid-line, and have large conspicuous hemispherical and hemi-ellipsoidal papillae, underleaves on gemmiparous and gynoecial shoots, and by its dioecy. The addition brings the number of New Zealand species of Cephaloziella to 18, 12 of which are endemic to New Zealand.     

Distribution patterns and biogeographic analysis of Austral Polychaeta (Annelida)

Aim We investigate the biogeography of Austral Polychaeta (Annelida) using members of the families Eunicidae, Lumbrineridae, Oenonidae, Onuphidae, Serpulidae and Spionidae and Parsimony Analysis of Endemicity (PAE). We determine whether observed polychaete distribution patterns correspond to traditional shallow-water marine areas of endemism, estimate patterns of endemism and relationships between areas of endemism, and infer the biological processes that have caused these patterns. Location The study is concerned with extant polychaete taxa occupying shallow-water areas derived from the breakup of the Gondwana landmass (i.e. Austral areas). Methods Similarity was assessed using a significance test with Jaccard's indices. Areas not significantly different at 0.99 were combined prior to the PAE. Widespread species and genera (155 taxa) were scored for presence/absence for each area of endemism. PAE was used to derive hypotheses of area relationships. Hierarchical patterns in the PAE trees were identified by testing for congruence with patterns derived from cladistic biogeographic studies of other Gondwanan taxa and with geological evidence. Results The polychaete faunas of four area-pairs were not significantly different and the areas amalgamated: South-west Africa and South Africa, New Zealand South Island and Chatham Islands, Macquarie Island and Antipodean Islands, and West Antarctica and South Georgia. Areas with the highest levels of species endemism were southern Australia (67.0%), South-east South America (53.2%) and South Africa (40.4%). About 60% of species and 7.5% of genera occupied a single area of endemism. The remainder were informative in the PAE. Under a no long-distance dispersal assumption a single minimal-length PAE tree resulted (l=367; ci=0.42); under dispersal allowed, three minimal-length trees resulted (l=278; ci=0.56). In relation to the sister grouping of the New Zealand areas and Australia we find congruence between our minimal-length trees and those derived from a biogeographic study of land plants, and with area relationships predicted by the Expanding Earth Model. Main conclusions The polychaete distribution patterns in this study differ slightly from the classical areas of endemism, most notably in being broader, thereby bringing into question the value of using single provincial system for marine biogeographic studies. The Greater New Zealand region is found to be ‘monophyletic’ with respect to polychaetes, that is comprising a genuine biogeographical entity, and most closely related to the polychaete fauna of southern Australia. This finding is consistent with studies of land plants and with the Expanding Earth model, but disagrees with conventional geology and biogeographic hypothesis involving a ‘polyphyletic’ New Zealand. Both vicariance and concerted range expansion (=biotic dispersion) appear to have played important roles in shaping present-day distribution patterns of Austral polychaetes. Shallow-water ridge systems between the Australian and Greater New Zealand continental landmasses during the Tertiary are thought to have facilitated biotic dispersion.     

Late Cenozoic diversification of the austral genus Lagenophora (Astereae,Asteraceae)

Lagenophora (Astereae, Asteraceae) has 14 species in New Zealand, Australia, Asia, southern South America, Gough Island and Tristan da Cunha. Phylogenetic relationships in Lagenophora were inferred using nuclear and plastid DNA regions. Reconstruction of spatio‐temporal evolution was estimated using parsimony, Bayesian inference and likelihood methods, a Bayesian relaxed molecular clock and ancestral area and habitat reconstructions. Our results support a narrow taxonomic concept of Lagenophora including only a core group of species with one clade diversifying in New Zealand and another in South America. The split between the New Zealand and South American Lagenophora dates from 11.2 Mya [6.1–17.4 95% highest posterior density (HPD)]. The inferred ancestral habitats were openings in beech forest and subalpine tussockland. The biogeographical analyses infer a complex ancestral area for Lagenophora involving New Zealand and southern South America. Thus, the estimated divergence times and biogeographical reconstructions provide circumstantial evidence that Antarctica may have served as a corridor for migration until the expansion of the continental ice during the late Cenozoic. The extant distribution of Lagenophora reflects a complex history that could also have involved direct long‐distance dispersal across southern oceans. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 177 , 78–95.     

Isolation affects tree‐scale epiphytic lichen community structure on New Zealand mountain beech trees

Question: Is epiphytic lichen community structure significantly affected by isolation from source community? Location: Foothills of the Southern Alps, South Island, New Zealand. Methods: Epiphytic lichen richness and environmental variables were measured on 382, young Nothofagus solandri var. cliffortioides (Hook. f.) Poole (mountain beech) trees that had recently colonized grassland adjacent to a forest remnant. Richness and the presence of individual lichen taxa were modelled as a function of isolation from the forest fragment, tree size and other habitat conditions. Results: Richness of epiphytic lichen communities was negatively related to tree isolation, although this effect was much smaller than the effects of tree size and other local (tree‐scale) habitat conditions. Different lichen taxa responded in different ways to isolation, area effects and local habitat conditions. Conclusions: This study shows that many epiphytic lichens on mountain beech are limited in their ability to colonize new substrate, even over distances of less than 1 km, which may be due to limitation in dispersal and/or establishment. Lichens are greatly influenced by local habitat conditions, such as tree size, and in this particular environment their negative interaction with sooty moulds is an important driver of community structure.     

Socio-economic drivers of freshwater fish declines in a changing climate: a New Zealand perspective

New Zealand has a freshwater fish fauna characterized by high levels of national and local endemism and which is threatened by anthropogenic stressors including habitat destruction or deterioration, commercial harvest, pollution and interactions with invasive exotic species. Significant expansion of New Zealand's dairy production has recently created further deterioration of lowland water quality and greater pressure for water allocation in drier eastern regions of the South Island. New Zealand has large freshwater resources and its climate is predicted to experience less dramatic changes in mean annual temperature and precipitation than many other regions of the world as a result of anthropogenic climate change. Predicted changes in regional climate and further expansion of the dairy industry, however, will impose similar pressures on freshwater resources in northern New Zealand to those already acting to threaten freshwater biodiversity in the eastern South Island.