杨树重金属相关异戊二烯化植物蛋白(HIPPs)基因的鉴定及表达分析

金属伴侣在植物的生理活动中发挥关键作用，负责结合金属离子并将其转运至靶蛋白以维持细胞的金属离子稳态。目前关于HIPP （heavy metal-associated isoprenylated plant protein）金属伴侣蛋白的特性和功能分析多集中于模式植物拟南芥。本研究在毛果杨（Populus trichocarpa）中鉴定了14个PtHIPPs蛋白，均具有两个保守的金属离子结合基序MXCXXC，氨基末端可以形成βαββαβ二级结构，羧基末端具有保守的异戊二烯化基序；一些PtHIPPs还具有赖氨酸和/或甘氨酸富集区。根据基因结构、蛋白质的保守基序和进化树分析，PtHIPPs蛋白可分为3个亚组。PlantGenIE的组织特异性表达数据及荧光定量PCR鉴定结果显示，毛果杨PtHIPPs基因及小黑杨（Populus simonii×Populus nigra）PnHIPPs基因具有特定的组织表达特异性且存在差异。此外，利用缺铜及过量铜离子处理小黑杨植株不同时间后，不同组织部位中PnHIPPs基因的表达模式发生改变。本研究为鉴定木本模式植物杨树HIPPs蛋白在维持铜离子稳态过程中发挥的作用提供了参考依据。     

杨属植物分类的研究进展和展望

自林奈建立杨属（Populus）以来,众多的学者对杨属的分类进行了研究,并建立了较多的分类系统。目前的国际杨属分类,总体上还停留在传统形态分类阶段,存在明显的地域和国别特征。尽管各国在主流上都采用“属—组—种”的分类阶元,但在种、亚种、变种的划分上,却存在很大的不同。中国和美国分别是细分派和聚合派的代表,两国的分类系统存在很大分歧,但各有优点和缺点。即使在国内,杨属分类也还有很多需要解决的问题。新兴的分子系统学研究,为杨属的分类修订提供了一些有益参考,但总体贡献不大。国际杨属分类的趋势和终极目标是建立基于系统发生的统一分类系统。这需要基于种群和综合物种概念,融合形态学、生态学、生物地理学、基因组生物信息学和进化生物学等的综合系统分类来实现。     

入侵植物与本地植物互作对丛枝菌根真菌AMF侵染率的影响

外来植物成功入侵与菌根共生体存在着密不可分的关系,丛枝菌根真菌（AMF）侵染率是反映其侵染植物情况的重要指标,影响侵染率的因素很多,但是入侵植物与本地植物互作对AMF侵染率的影响目前还不清楚。因此,本研究以外来入侵植物黄顶菊Flaveria bidentis、豚草Ambrosia artemisiifolia、三叶鬼针草Bidens pilosa和本地植物狗尾草Setaria viridis、黄香草木犀Melilotus officinalis、藜Chenopodium album为研究对象,设置入侵植物单种处理、本地植物单种处理、每种入侵植物分别与本地植物两两混种处理以及每种入侵植物同时与所有本地植物混种处理,观察测定不同处理下入侵植物与本地植物根系丛枝、泡囊、菌丝及总侵染率,比较研究本地植物种类变化对入侵植物和本地植物根系AMF侵染率的影响,以及3种入侵菊科植物对本地植物AMF侵染率的影响规律是否一致。结果表明,与入侵植物单种相比,除豚草与藜、豚草同时与3种本地植物混种两个处理中,豚草根系的AMF菌丝及总侵染率显著增加外,其余所有处理中入侵植物总侵染率均无显著差异;与狗尾草或黄香草木犀单种相比,每种入侵植物同时与所有本地植物混种处理中,本地植物狗尾草和黄香草木犀根系上的AMF菌丝及总侵染率均显著降低,即随本地植物种类数目的增加,对本地植物根系的菌丝及总侵染率存在显著抑制作用,而对入侵植物无显著影响。     

不同生境中桂花和夹竹桃叶际细菌的群落结构

植物叶际微生物多样性是目前植物-微生物关系研究的热点之一,但影响叶际微生物群落结构的主要因素目前还存在很大争议.本研究以生长在3处生境的桂花和夹竹桃为对象,基于高通量测序技术,分析2种植物叶际细菌的群落结构,探讨影响植物叶际细菌群落结构的主要因素.结果表明:来自3处生境的2种植物叶际细菌多样性无显著差异,构成叶际细菌群落的优势门主要包括放线菌门、拟杆菌门、衣原体门、蓝细菌门、厚壁菌门和变形菌门,优势属主要包括甲基杆菌属、鞘氨醇单胞菌属、薄层杆属、Polaromonas和无毛螺旋体属.植物种类、生境及二者的交互作用均能显著影响叶际细菌群落结构,其中生境的影响最大.     

Biology and biocontrol potential of Ampelomyces mycoparasites, natural antagonists of powdery mildew fungi

Historically, pycnidial fungi belonging to the genus Ampelomyces were among the first mycoparasites to be studied in detail and were also the first fungi used as biocontrol agents of plant parasitic fungi. The interactions between host plants, powdery mildew fungi and Ampelomyces mycoparasites are one of the most evident cases of tritrophic relationships in nature although their study has received little attention in fungal and plant ecology so far. Ampelomyces mycoparasites have now become one of the most advanced in terms of commercial development of a fungal biocontrol agent, although there is still a need for more development work to produce a product with reliability approaching that of conventional chemical treatments. This review summarizes the taxonomy, genetic diversity, life cycle, mode of action, natural occurrence, host range, biocontrol potential, mass production and commercialization of these mycoparasites and compares the biocontrol ability of Ampelomyces with that of other fungal antagonists of powdery mildews.     

内蒙古荒漠草原植物叶片功能性状关系及其经济谱分析

气候变化和人为干扰导致草原荒漠化加剧, 引发了严重的环境问题。因此, 对荒漠草原植物与环境变化关系的研究愈加迫切, 分析比较荒漠草原不同功能型物种叶片经济谱具有重要意义。该研究通过测定内蒙古荒漠草原生态系统不同功能型植物叶片的光合及叶绿素荧光参数、比叶面积和叶片氮素含量, 验证了荒漠草原植物叶片经济谱的存在, 明确了各功能型植物叶片性状间的关系及其在叶片经济谱中的位置。荒漠草原不同功能型植物叶片性状差异明显, 草本植物的比叶面积(SLA)、单位质量叶氮含量(N_mass)分别是灌木的2.39倍和1.20倍; 一年生植物单位面积最大净光合速率(A_area)、SLA、光合氮利用效率(PNUE)分别是多年生植物的1.93倍、2.13倍和4.24倍; C₄植物的A_area、SLA、PNUE分别是C₃植物的2.25倍、1.73倍和3.61倍。除A_area与单位面积叶氮含量(N_area)、PSII的实际光化学效率(Φ_PSII)与SLA之间不存在显著相关关系外, 叶片性状间存在广泛的相关关系, 且均达到极显著水平。这验证了叶片经济谱在内蒙古荒漠草原植物中也同样存在。进一步分析表明, 一年生植物、草本植物、C₄植物叶片在叶片经济谱中位于靠近薄叶、光合能力强、寿命短的一端; 而多年生植物、灌木、C₃植物叶片靠近厚叶、光合能力弱、寿命长的一端。这说明荒漠草原中不同功能型植物可通过权衡其经济性状间的关系而采取不同的适应策略, 对于荒漠草原生态系统管理具有重要的理论指导意义。     

A molecular link between autophagy and circadian rhythm in plants

Extremely high or low autophagy levels disrupt plant survival under nutrient starvation. Recently, autophagy has been reported to display rhythms in animals. However, the mechanism of circadian regulation of autophagy is still unclear. Here, we observed that autophagy has a robust rhythm and that various autophagy-related genes (ATGs) are rhythmically expressed in Arabidopsis. Chromatin immunoprecipitation (ChIP) and dual-luciferase (LUC) analyses showed that the core oscillator gene TIMING OF CAB EXPRESSION 1 (TOC1) directly binds to the promoters of ATG (ATG1a, ATG2, and ATG8d) and negatively regulates autophagy activities under nutritional stress. Furthermore, autophagy defects might affect endogenous rhythms by reducing the rhythm amplitude of TOC1 and shortening the rhythm period of CIRCADIAN CLOCK-ASSOCIATED 1 (CCA1). Autophagy is essential for the circadian clock pattern in seedling development and plant sensitivity to nutritional deficiencies. Taken together, our studies reveal a plant strategy in which the TOC1-ATG axis involved in autophagy-rhythm crosstalk to fine-tune the intensity of autophagy.     

降雨变化对高寒草甸不同植物功能群凋落物质量及其分解的影响

凋落物分解是生态系统物质循环的重要过程, 探究降雨变化对高寒草甸不同植物功能群凋落物分解的影响, 有助于了解高寒草甸物质循环对降雨变化的响应规律和机制。该研究设置减雨90% (Pr-90)、减雨50% (Pr-50)、减雨30% (Pr-30)、自然降雨(CK)和增雨50% (Pr+50) 5个降雨处理, 采用网袋分解法, 对青藏高原东部高寒草甸的3种植物功能群(禾本科、莎草科、杂类草)及群落凋落物的化学性质、质量损失和养分释放动态进行研究。结果表明: 1)减雨处理(Pr-90、Pr-50和Pr-30)显著增加禾本科凋落物的初始氮(N)含量, 显著降低碳氮比(C:N)和木质素氮比(木质素:N); 增雨处理(Pr+50)显著增加各类型凋落物初始磷(P)含量。2)根据Olson负指数模型拟合, 不同降雨处理下, 杂类草凋落物分解最快, 分解95%的时间为3.49-7.45年; 群落和莎草科次之, 分别为4.07-8.05和4.65-7.74年; 禾本科分解最慢, 为5.84-11.18年。3)极端减雨(Pr-90)抑制各类型凋落物分解, 适度降雨变化(Pr-50、Pr-30和Pr+50)抑制禾本科分解而对莎草科、杂类草和群落无显著影响, 仅增雨(Pr+50)明显促进杂类草分解。4)各类型凋落物C释放在减雨(Pr-90和Pr-30)下受到抑制, 增雨或减雨均促进禾本科N和P释放, 对于莎草科、杂类草和群落凋落物而言, Pr-30促进N释放, Pr-90抑制P释放, Pr+50促进P释放。5)结构方程模型(SEM)表明, 质量和养分残留率受降雨量的直接负效应, 也受凋落物初始C、N、P和木质素、纤维素、半纤维素含量的间接影响。综上所述, 高寒草甸凋落物质量损失及养分释放受凋落物类型和降雨量的共同影响。考虑到禾本科分解最慢且对降雨变化的响应最为敏感, 未来应关注气候变化尤其是极端减雨下禾本科的质量损失及养分释放对高寒草甸有机质输入及C、N、P循环的影响。     

Potassium channels in plant cells

Potassium (K(+) ) is the most abundant inorganic cation in plant cells. Unlike animals, plants lack sodium/potassium exchangers. Instead, plant cells have developed unique transport systems for K(+) accumulation and release. An essential role in potassium uptake and efflux is played by potassium channels. Since the first molecular characterization of K(+) channels from Arabidopsis thaliana in 1992, a large number of studies on plant potassium channels have been conducted. Potassium channels are considered to be one of the best characterized class of membrane proteins in plants. Nevertheless, knowledge on plant potassium channels is still incomplete. This minireview focuses on recent developments in the research of potassium transport in plants with a strong focus on voltage-gated potassium channels.     

An introduction and study design

Under the sponsorship of the International Programme on Chemical Safety (IPCS), 17 laboratories from diverse regions of the world participated in evaluating the utility of four plant bioassays for detecting genetic hazards of environmental chemicals. The bioassays included in this collaborative study were: Arabidopsis thaliana embryo and chlorophyll assay and Tradescantia stamen hair assay, Tradescantia paludosa micronucleus assay and Vicia Faba root tip assay. Four to six laboratories participated in the performance of each of the bioassays. All laboratories participating in a particular bioassay were supplied with uniform plant material as well as standardized protocol. Five direct acting water soluble test chemicals, i.e. maleic hydrazide, methyl nitrosourea, ethyl methanesulfonate, sodium azide and azidoglycerol, were selected for this study. The study was designed to be completed in three phases. Ethyl methanesulfonate was used as a positive control and has already been reported earlier (Sandhu et al., 1991). The data from the remaining four chemicals used for the evaluation of four plant test systems in the first phase of the collaborative study are reported in this issue.     

内蒙古和青藏高原草原植物叶片与根系氮利用效率空间格局及影响因素

氮利用效率是植物的关键功能性状, 同时紧密关联生态系统功能, 但是目前对氮利用效率的区域格局及影响因素仍然不清楚。该研究分析了内蒙古和青藏高原草原82个调查地点、139种植物叶片和根系的氮利用效率及其与环境因素、植物功能群之间的关系, 实验结果显示: 1)草甸草原植物叶片的氮利用效率为53 g·g ^-1, 显著大于高寒草甸(46 g·g ^-1)、荒漠草原(41 g·g ^-1)和典型草原(39 g·g ^-1)。高寒草甸根系氮利用效率为108 g·g ^-1, 显著高于其他生态系统。2)叶片氮利用效率比根系对温度更加敏感, 但随着干旱指数的增加, 两者均表现出显著的降低趋势。3)杂类草叶片和根系氮利用效率低于莎草科和禾本科植物, 豆科植物叶片和根系氮利用效率分别比非豆科植物低48%和60%。4)植物氮利用效率与土壤氮含量之间没有显著关系。总体上, 内蒙古和青藏高原草原植物叶片和根系氮利用效率的空间格局存在差异, 主要影响因素为植物功能群和干旱指数。本研究系统揭示内蒙古和青藏高原草原植物氮利用效率的空间格局及关键驱动因子, 有助于在全球变化背景下了解我国草地生产力维持机制, 同时为草原生态系统管理提供科学依据。     

光信号转导因子HY5调控拟南芥分枝的功能研究

光是影响植物分枝的重要外在环境因素,但光信号因子HY5（ELONGATED HYPOCOTYL5）是否调控植物分枝目前尚不清楚。创制了HY5转基因超表达植株,并获得商业化T-DNA插入突变体纯合植株。通过比较野生型（WT）、超表达植株（HY5-OE）、突变体（hy5-215）的分枝数目发现,与野生型相比,超表达植株分枝数目显著增加,而突变体分枝数目则显著减少。进一步比较这些遗传材料的拟南芥植株分枝的负调控关键因子BRC1（BRANCHED1）转录本水平差异,发现与野生型相比,超表达植株中BRC1转录本显著下调、突变体中显著上调。研究结果表明,HY5通过抑制拟南芥分枝关键负调控因子BRC1的转录水平,进而促进拟南芥的分枝。研究结果为阐明HY5调控分枝的生物学功能提供了一定的理论依据。     

家养食草动物粪便中的花粉及菌孢子类型及其对人类活动的指示意义

考古遗址中动物粪化石中的微体植物遗存是重建过去生态环境以及人类活动的重要材料,然而对于能够指示人类活动的粪化石孢粉组合类型及其特征仍然缺乏清楚的认识。本文研究了山羊(Capra aegagrus)、绵羊(Ovis aries)、牛(Bos taurus)、骆驼(Camelus)、牦牛(Bos grunniens)和马(Equus caballus)等几种中国常见的家养食草类动物粪便中的主要孢粉和真菌孢子类型。通过分析这些动物粪便的花粉组合特征,探讨了花粉和菌孢子等微体植物遗存对生态环境及人类活动的指示意义。花粉种类丰度低、一些特征种属花粉(如禾本科、藜科)含量高是家养食草类动物粪便花粉组合的主要特征,可以用于指示人类的饲养行为。家养食草动物粪便中的粪生真菌孢子类型主要有Sporormiella,Sodaria,Pleospora,Coniochaeta,Thecaphora and Dictyosporium。研究表明真菌孢子的分布主要受到动物活动范围的影响,这使得利用粪生菌孢子(如Sporormiella)并结合其他记录来反映人类的饲养或游牧活动成为可能。     

华癸中慢生根瘤菌7653R 3个脂质转运蛋白基因的克隆、突变及共生表型北大核心CSCD

【目的】脂类转移家族蛋白基因编码一类参与脂类转运及代谢的蛋白。本研究旨在构建华癸中慢生根瘤菌3个脂质转运家族蛋白基因的突变株,检测及分析突变体与紫云英共生条件下的表型及功能。【方法】利用生物信息学分析与预测转脂蛋白的结构特征及功能,采用荧光定量技术检测目标基因在自生和共生条件下的表达特性,通过插入突变技术构建目标基因突变株,并进行植物盆栽实验考察其共生表型。【结果】MCHK-5577、MCHK-2172和MCHK-2779基因编码蛋白属于START/RHO alpha_C/PITP/Bet_v1/Cox G/Cal C(SRPBCC)超家族,包含脂类转移结构域,参与脂类转运或代谢,与百脉根等中慢生根瘤菌相应基因的序列相似性达95%以上。这3个基因在共生条件下的表达水平都增高。分别构建了MCHK-5577、MCHK-2172和MCHK-2779基因突变菌株,与野生型菌株7653R相比,接种突变株MCHK-2172mut、MCHK-2779mut和MCHK-5577mut后的植株地上部分生物量和根瘤固氮酶活性显著降低。【结论】华癸中慢生根瘤菌脂质转移家族蛋白基因在共生互作过程中发挥重要作用,突变后明显影响共生固氮表型。本文的实验结果为深入研究脂类转移蛋白在共生固氮作用中的功能机制奠定了基础。     

FLC调控植物成花的分子机制研究新进展

FLC是植物成花关键抑制因子, 主要通过结合到其下游2个关键的成花促进基因(FT和SOC1)启动子上而抑制二者的表达。此外, 还可以与其它调控因子结合调控开花。然而, 关于FLC在成花调控中的具体分子机制仍需深入研究。该文主要结合8条成花调控遗传途径, 梳理近年来与FLC相关的新进展, 并展望了未来的研究方向。     

GmPIN1-mediated auxin asymmetry regulates leaf petiole angle and plant architecture in soybean

Crop breeding during the Green Revolution resulted in high yields largely due to the creation of plants with semi-dwarf architectures that could tolerate high-density planting. Although semi-dwarf varieties have been developed in rice, wheat and maize, none was reported in soybean(Glycine max), and few genes controlling plant architecture have been characterized in soybean. Here, we demonstrate that the auxin efflux transporter PINFORMED1(GmPIN1), which determines polar auxin transport, regulate...     

硒处理对斜茎黄芪生长生理和初生代谢的影响

以一种具有较高Se富集能力的植物——斜茎黄芪(Astragalus adsurgens)为试验材料,在水培条件下研究不同浓度Se处理对其生长发育、光合参数和初生代谢产物积累的影响。结果表明：5μmol·L^-1Se处理显著促进了斜茎黄芪根系和地上部的伸长生长;100μmol·L^-1Se处理则具有相反效果。光合色素含量和叶片叶绿素荧光参数研究结果与生长指标相一致,低浓度Se对斜茎黄芪叶片的光合作用具有促进作用,高浓度Se则对其具有明显的抑制作用。随着处理浓度的升高,斜茎黄芪根系和地上部Se含量逐渐增加,但Se的转运系数明显降低,100μmol·L^-1处理下Se转运系数比5μmol·L^-1处理降低了83.5%。通过对初生代谢产物进行检测和分析,发现低浓度Se处理主要上调了斜茎黄芪中与氨基酸代谢相关途径的代谢水平,而高浓度Se处理主要上调了与次生代谢物质合成关系密切的初生代谢产物的代谢水平。我们的研究结果表明,低浓度Se处理提高了斜茎黄芪光合作用水平以及与生长相关的初生代谢水平,从而促进了植株生长;高浓度S...     

施氏假单胞菌A1501铁吸收调节蛋白Fur的表达特性与功能鉴定

铁是细胞生理代谢的重要金属元素,是多种氧化还原酶类、过氧化物酶类的重要组成部分。革兰氏阴性菌中,胞内铁转运、储存和利用主要由铁吸收调节蛋白Fur（ferric uptake regulator）调控。水稻根际联合固氮菌——施氏假单胞菌（Pseudomonas stutzeri）A1501基因组中含有一个fur同源基因,但其具体功能尚不清楚。比较了A1501中fur基因及其编码蛋白的序列特征,并通过实时荧光定量PCR（real-time quantitative,qRT-PCR）和Western blotting杂交方法测定了fur基因和Fur蛋白的表达特性,结果发现fur基因表达水平与环境中铁浓度呈负相关,在铁限制条件下高表达,铁过量条件下表达受抑制。构建了fur基因突变株和功能回补株,表型测定发现fur突变影响了A1501的碳源代谢谱,并导致A1501对过氧化氢胁迫敏感。胞内铁含量测定表明,fur突变株内的铁含量为野生型的1.3倍,进一步qRT-PCR测定表明fur突变影响了铁离子转运系统及过氧化物酶编码基因的表达。研究结果为解析根际微生物胞内铁平衡调节及根际环境适应机制奠定了理论基础。     

Characterization of the pectin methylesterase-like gene AtPME3: a new member of a gene family comprising at least 12 genes in Arabidopsis thaliana

Pectin demethylesterification appears to be catalysed by a number of pectin methylesterase (PME) isoenzymes in higher plant species. In order to better define the biological role of these isoenzymes in plant cell growth and differentiation, we undertook molecular studies on the PME-encoding genes in Arabidopsis thaliana. In this paper, we report the characterization of AtPME3, a new PME-related gene of 4 kb in length that we have mapped on Chromosome III. AtPME3 encodes a putative mature PME-related isoenzyme of 34 kDa with a basic isoelectric point. Since the extent of the gene family encoding PME in higher plant species is still unknown, we resorted to the use of degenerate primers designed from several well-known consensus regions to identify new PME-related genes in the genome of Arabidopsis. Our results, in combination with several known expressed sequences tags (ESTs), indicate that the Arabidopsis genome contains at least 12 PME-related genes. Consequently, a method of systematic gene expression analysis has been applied in order to discern the expression pattern of these 12 genes throughout the plant at the floral stage. Whereas most of these genes appeared to be more or less ubiquitously expressed throughout the plant, several genes are distinguishable by their strikingly specific expression in certain organs. The present data bring a new insight into the role of specific PME-related genes in flower and root development.     

Research advancement in the processes and mechanisms of transporting methane by emerged herbaceous plants and hygrophytes

Methane (CH₄) is an important greenhouse gas, and is involved in atmospheric chemical reactions. Aquatic and hydric environments are important sources of atmospheric CH₄. Majority of CH₄ are transported and released to atmosphere by emerged herbaceous plants and hygrophytes in aquatic and hydric environments. In recent decades, there has been increasing attention on how plants transport CH₄. During CH₄ transportation processes, several interfaces of CH₄ exchange play important roles. First, the tips of lateral roots are primary locations (hotspots) for CH₄ entering the root systems and regulate the gross CH₄ transportation. Then, the diaphragms in the aerenchyma and the root collar impose great resistances for the overall CH₄ transportation processes. In early studies, it was controversial that whether CH₄ emission from plants to atmosphere was controlled by stomas or micropores (small cracks and holes in aboveground part of plant except the blade). Recent studies have confirmed the dominant role of micropores for CH₄ transportation and emission. The dead and damaged stems are widely considered to have positive effects on CH₄ transportation. Diffusion and convection are the two main transporting mechanisms of CH₄, with the efficiency of convection being generally higher than that of diffusion. Both biological (e.g. biomass and photosynthesis) and environmental (e.g. light, temperature and humidity) factors regulate the CH₄ transportation. Many studies have contributed to understanding the CH₄ transportation processes and mechanisms by emerged herbaceous plants and hygrophytes. However, there are still some questions needing further investigations. Issues of consideration may include the operational efficiency in the critical interfaces of CH₄ exchange, the plant parts that play a decisive role in the entire CH₄ transportation, the underlying roles of diffusion and convection on CH₄ interfaces exchanges and entire long distance transports, the combined and coupling effects and mechanisms of biotic and abiotic factors, and the similarities and differences of CH₄ transporting processes and mechanisms among plant species.