Methylated lysine in storage body protein of sheep with hereditary ceroid-lipofuscinosis.

Juvenile ceroid-lipofuscinosis (Batten disease) is a hereditary storage disease with an autosomal-recessive mode of transmission. This disorder has been identified in humans, dogs and sheep. It is characterized by massive accumulations of autofluorescent storage bodies in many tissues. This storage body accumulation is accompanied by functional decline and degeneration of the affected tissues, and ultimately results in premature death. The primary defect responsible for juvenile ceroid-lipofuscinosis has not been identified. Previous studies have indicated that the storage material is primarily protein. Why this protein accumulates in storage bodies remains to he determined. In affected humans, the storage body protein appears to be abnormally rich in a methylated derivative of lysine (epsilon-N-trimethyllysine). Studies were undertaken to determine whether the storage bodies from sheep with hereditary ceroid-lipofuscinosis were also characterized by the presence of this modified amino acid. Chromatographic and mass spectral analyses of hydrolysates of the storage body protein indicated a significant fraction of the lysine residues in this protein were present as the epsilon-N-trimethyl derivative. This modified amino acid was not detected in hydrolysates of protein from normal sheep tissues or from tissues of sheep with GM1 gangliosidosis, nor did it appear to be present in the storage body protein from a human subject with the late infantile form of ceroid-lipofuscinosis. Thus, it is apparently specific to the storage body protein that accumulates in the juvenile type of this disease. The abnormal presence of epsilon-N-trimethyllysine in proteins could interfere with their sorting or degradation within cells and thus cause them to accumulate in the storage bodies characteristic of the human juvenile and ovine ceroid-lipofuscinoses.     

Receptor-mediated endocytosis of storage proteins by the fat body of Helicoverpa zea

The selective uptake of storage proteins by the fat body of the corn earworm Helicoverpa zea is mediated by a membrane-bound receptor protein. In this study, the major storage proteins of this insect species, arylphorin and very high density lipoprotein, were directly labeled with colloidal gold-particles of different size. After the fat body had been incubated with the labeled storage proteins, the distribution of these proteins was examined by electron microscopy. Both storage proteins were found at the extracellular side of coated pits and within coated vesicles. Moreover, fusion products of several coated vesicles such as endosomes and multivesicular bodies contained both proteins in their lumen. Ultimately, the proteins accumulated in electron-dense storage granules. Equal numbers of either storage protein were present in each organelle, supporting the notion that a single receptor mediates the uptake of both proteins. In contrast, only small numbers of gold-labeled immunoglobulin G molecules were found in the organelles, indicating that the protein uptake is specific for storage proteins. The results show that storage protein uptake in this lepidoteran species occurs in a process of receptor-mediated endocytosis that is similar to the well-established uptake of specific proteins into mammalian tissues.     

种子贮藏蛋白的运输、积累和基因表达调控

种子中贮藏蛋白的运输和积累途径主要有：(1)蛋白质合成后经内膜系统转移到蛋白质贮藏液泡(PSV)中积累;(2)合成的蛋白质直接在粗糙内质网的膜囊中积累形成蛋白质体;(3)贮藏蛋白不经高尔基体的加工由粗糙内质网上合成后直接运输到PSV中积累。贮藏蛋白基因的表达受该基因的顺式作用元件和反式作用因子的共同调控,此外染色体的结构也影响贮藏蛋白基因的表达。     

Optimal Learning Rules for Discrete Synapses

There is evidence that biological synapses have a limited number of discrete weight states. Memory storage with such synapses behaves quite differently from synapses with unbounded, continuous weights, as old memories are automatically overwritten by new memories. Consequently, there has been substantial discussion about how this affects learning and storage capacity. In this paper, we calculate the storage capacity of discrete, bounded synapses in terms of Shannon information. We use this to optimize the learning rules and investigate how the maximum information capacity depends on the number of synapses, the number of synaptic states, and the coding sparseness. Below a certain critical number of synapses per neuron (comparable to numbers found in biology), we find that storage is similar to unbounded, continuous synapses. Hence, discrete synapses do not necessarily have lower storage capacity.     

Inbound container storage price competition between the container terminal and a remote container yard

With the rapid development of global ocean transportation, storage space in container terminals is becoming a scarce resource. Hence, the terminal yard only performs as a temporary storage facility for inbound cargos. A storage charge is levied for inbound cargos that stay longer than a free storage time (called free-time-limit). After the free-time-limit, customers may move cargos from the terminal yard to a remote container yard where the storage price is lower than that in the terminal. This paper proposes inbound container storage pricing game models between the container terminal and a remote container yard. Two cases are considered: (1) the inbound container’s dwell time is random and follows a probability distribution function; (2) the inbound container’s dwell time is sensitive to the storage prices. The primary objective of this paper is to analyze the storage pricing behavior and competition outcomes of the container terminal and the remote container yard. A number of insights and analysis are provided.     

气候变化对森林土壤有机碳贮藏影响的研究进展

森林土壤有机碳库是全球碳循环的重要组成部分,其积累和分解的变化直接影响陆地生态系统的碳贮藏与全球的碳平衡.气候变化将影响植物光合作用及土壤有机碳的分解和转化过程,进而影响森林土壤有机碳贮量及土壤碳动态.温度、降水、大气CO2浓度等气候因子对森林土壤碳贮藏均具有重要影响.了解气候变化对森林土壤有机碳贮藏的影响有助于人们科学管理森林碳库以及进一步寻找缓解气候变化的可行途径.为此,本文综述了森林土壤有机碳贮量的分布以及升温、降水变化和大气CO2浓度升高对森林土壤有机碳贮藏影响的国内外研究进展,并提出了有关的研究展望.     

Optimal patterns of growth and reproduction for perennial plants with persisting or not persisting vegetative parts

Summary Optimal allocation of energy to growth, reproduction and storage was considered for perennial plants differing in the proportion of vegetative structures persisting over winter and/or in the amount of resources which can be relocated to storage before abscission of some organs. It was found that for every mortality level there exists a critical proportion of persistent organs. Below this critical value it is optimal to grow without reproduction for the first years until a characteristic size is reached; afterwards, that size is maintained year after year and all extra resources are devoted to reproduction. Some storage is also necessary to maintain constant size. If the proportion of retained vegetative mass is above the critical value, the optimal strategy is gradual growth to an asymptotic size, with growth and reproduction occurring in several years following maturation. In this case real storage occurs only until maturation is reached, then storage is realized only by energy relocation from the vegetative body. Although the optimal solution changes abruptly qualitatively at a given proportion of resources saved from year to year, further growth of this proportion above the critical level brings about a greater difference between size reached at maturity and final size. The predictions of the model seem to follow the pattern of nature qualitatively.     

Is the osmotically inactive sodium storage pool fixed or variable?

Recently, there is renewed interest in the role of osmotically inactive Na(+) storage during Na(+) retention. Although it is well accepted that a portion of the total exchangeable Na(+) reservoir is osmotically inactive, there is current controversy as to whether the osmotically inactive Na(+) storage pool is fixed or variable during Na(+) retention. In this article, we analyze the current scientific evidence to assess whether the osmotically inactive Na(+) storage pool can be dynamically regulated. Our analysis supports the assertion that the osmotically inactive Na(+) storage pool is fixed rather than variable.     

种子贮藏特性研究的实验影响因素

简述了确定种子贮藏类型和适宜贮藏环境条件的基本实验设计思路。确定种子贮藏特性的实验研究通常采用两步程序法:首先测定种子的脱水耐性,然后测定种子在不同环境中贮存后的生活力变化。种子采集、运输、加工、脱水、含水量测定、生活力测定的方法都会影响实验结果的准确性。     

Apical Dominance and the Utilization of Carbo-hydrates During Storage of Potato Tubers

Although carbohydrates are metabolized throughout potato tubersduring storage, it would nevertheless appear as if there isenhanced carbohydrate metabolism in the region of the apicalbud. Soluble sugars are higher in this region of the tuber duringthe whole period of storage and growth. In the sprouts themselvesglucose accumulates to extremely high levels. It is postulatedthat this glucose is pooled and is eventually used for the synthesisof starch, especially during the development of ‘littlepotatoes’ which occurs during prolonged storage at lowtemperature in the dark.     

Moving the insulin-regulated glucose transporter GLUT4 into and out of storage

The glucose transporter isoform GLUT4 is unique among the glucose transporter family of proteins in that, in resting cells, it is sequestered very efficiently in a storage compartment. In insulin-sensitive cells, such as fat and muscle, insulin stimulation leads to release of GLUT4 from this reservoir and its translocation to the plasma membrane. This process is crucial for the control of blood and tissue glucose levels. Investigations of the composition and structure of the GLUT4 storage compartment, together with the targeting motifs that direct GLUT4 to this compartment, have been extensive but have been controversial. Recent findings have now provided a clearer consensus of opinion on the mechanisms involved in the formation of this storage compartment. However, another controversy has now emerged, which is unresolved. This concerns the issue of whether the insulin-regulated step occurs at the level of release of GLUT4 from the storage compartment or at the level at which released vesicles fuse with the plasma membrane.     

Enabling secure auditing and deduplicating data without owner-relationship exposure in cloud storage

The public cloud storage auditing with deduplication has been studied to assure the data integrity and improve the storage efficiency for cloud storage in recent years. The cloud, however, has to store the link between the file and its data owners to support the valid data downloading in previous schemes. From this file-owner link, the cloud server can identify which users own the same file. It might expose the sensitive relationship among data owners of this multi-owners file, which seriously harms the data owners’ privacy. To address this problem, we propose an identity-protected secure auditing and deduplicating data scheme in this paper. In the proposed scheme, the cloud cannot learn any useful information on the relationship of data owners. Different from existing schemes, the cloud does not need to store the file-owner link for supporting valid data downloading. Instead, when the user downloads the file, he only needs to anonymously submit a credential to the cloud, and can download the file only if this credential is valid. Except this main contribution, our scheme has the following advantages over existing schemes. First, the proposed scheme achieves the constant storage, that is, the storage space is fully independent of the number of the data owners possessing the same file. Second, the proposed scheme achieves the constant computation. Only the first uploader needs to generate the authenticator for each file block, while subsequent owners do not need to generate it any longer. As a result, our scheme greatly reduces the storage overhead of the cloud and the computation overhead of data owners. The security analysis and experimental results show that our scheme is secure and efficient.     

Developmental patterns in anatomy are shared among separate evolutionary origins of stem succulent and storage root-bearing growth habits in Adenia (Passifloraceae)

The architecture of flowering plants is astonishingly diverse. To understand evolutionary patterns and processes that account for this diversity, I investigated developmental anatomy of storage roots and stems of 58 species in the genus Adenia (Passifloraceae) using an explicit phylogenetic context. Because expanded storage roots and stem succulence evolved multiple times in Adenia, patterns of transition between succulent and nonsucculent forms were analyzed using a comparative test that accommodates phylogenetic uncertainty. I tested the innervation hypothesis, wherein I expected the evolution of vascular strands to be correlated with evolutionary increases in water storage tissue if evolution of vascular strands facilitates transport through water and starch storage structures. Not only is evolution of vascular strands in stems statistically coupled with evolutionary increases in parenchyma storage tissue, most lineages that evolved expanded storage roots also evolved vascular strands in these roots in parallel to succulent stems. I proposed that vascular strands and closely associated storage parenchyma found in both roots and shoots of Adenia comprise a homologous unit. A switch-like evolutionary mechanism that alters the spatial expression of this unit between roots and shoots can account, in large part, for transitions between markedly different habits such as storage-rooted herbs and succulent-stemmed shrubs.     

Tree Diversity Explains Variation in Ecosystem Function in a Neotropical Forest in Panama

Many experimental studies show that a decline in species number has a negative effect on ecosystem function, however less is known about this pattern in natural communities. We examined the relative importance of environment, space, and diversity on ecosystem function, specifically tree carbon storage in four plant types (understory/canopy; trees/palms), in a tropical forest in central Panama. The objectives of this study were to detect the relationship between tree diversity and carbon storage given the environmental and spatial variation that occur in natural forests and to determine which species diversity measure is more important to tree carbon storage: richness or dominance. We used redundancy analyses to partition the effect of these sources of variation on tree carbon storage. We showed that together, environment, space, and diversity accounted for 43 percent of tree carbon storage, where diversity (19%) alone is the most important source of variation and explained more variation than space (13%) and environment (1%) together. Therefore, even in natural forests where substantial environment and spatial variation can be found, it is still possible to detect the effect of diversity on ecosystem function at scales relevant to conservation. Moreover, both richness and dominance are important to explain the variation on tree carbon storage in natural forests suggesting that these two diversity measures are complementary. Thus, tree diversity is important to predict tree carbon storage in hyperdiverse forests.     

Seed storage: maintaining seed viability and vigor for restoration use

Effective seed storage after sourcing (harvesting or purchasing) is critical to restoration practitioners and native seed producers, as it is key to maintaining seed viability. Inadequate seed storage can lead to a waste of both natural and economic resources when seeds of poor quality are sown. When working with native species with unknown storage behavior, general assumptions can be made based on studies on related species, and standard practices may be applied with caution; however, an investigation should be conducted to understand if specific storage requirements are needed and for how long seeds can be stored before they lose significant viability. In this paper of the Special Issue Standards for Native Seeds in Ecological Restoration, we provide an overview of the key concepts in seed storage and the steps to take for effective storage of native seeds for restoration use.     

Impact of blood manufacturing and donor characteristics on membrane water permeability and in vitro quality parameters during hypothermic storage of red blood cells

Several factors have been proposed to influence the red blood cell storage lesion including storage duration, blood component manufacturing methodology, and donor characteristics [1,18]. The objectives of this study were to determine the impact of manufacturing method and donor characteristics on water permeability and membrane quality parameters.Red blood cell units were obtained from volunteer blood donors and grouped according to the manufacturing method and donor characteristics of sex and age. Membrane water permeability and membrane quality parameters, including deformability, hemolysis, osmotic fragility, hematologic indices, supernatant potassium, and supernatant sodium, were determined on day 5 ± 2, day 21, and day 42. Regression analysis was applied to evaluate the contribution of storage duration, manufacturing method, and donor characteristics on storage lesion.This study found that units processed using a whole blood filtration manufacturing method exhibited significantly higher membrane water permeability throughout storage compared to units manufactured using red cell filtration. Additionally, significant differences in hemolysis, supernatant potassium, and supernatant sodium were seen between manufacturing methods, however there were no significance differences between donor age and sex groups.Findings of this study suggest that the membrane-related storage lesion is initiated prior to the first day of storage with contributions by both blood manufacturing process and donor variability. The findings of this work highlight the importance of characterizing membrane water permeability during storage as it can be a predictor of the biophysical and chemical changes that affect the quality of stored red blood cells during hypothermic storage.     

Effect of freezing and storage temperature on stability and antimicrobial activity of an antibiotic mixture used for decontamination of tissue allografts

One of the most important risks to be controlled in tissue banking is the infection associated with the clinical use of auto- and allografts. Thus, tissue disinfection protocols are used, in addition to processing in controlled environments. For this purpose, combinations of antibiotics are designed to ensure a broad spectrum of antimicrobial activity. This type of protocol is usually validated by testing its antimicrobial efficacy. In this work, we have studied the effect of several factors on the potential of an antibiotic mixture: container, freezing, storage at 4 °C, storage at ??30 °C and storage at ??80 °C. The molecular stability of the compounds has also been tested, additionally to their efficacy. Our findings show that storage conditions affect the molecular stability of Fungizone and Tobramycin (only in case of frozen storage for the last one). Nevertheless, the solution retains its antimicrobial activity for several weeks. The availability of stored aliquots of disinfectant solution and defining expiry dates for different storage conditions can help to schedule tissue bank tasks.     

Peripheral membrane proteins mediate binding of vacuolar storage proteins to membranes of the secretory pathway of developing pea cotyledons

In developing pea cotyledons, storage proteins are sorted viadense vesicles into the protein storage vacuole. Formation ofthese unique transport vesicles is characterized by aggregationof their cargo proteins. Protein sorting into dense vesiclesis pH dependent. In order to gain insight into the molecularbasis of storage protein sorting, a membrane binding assay wasdeveloped which allows for a detailed biochemical analysis ofbinding events. Employing this assay it was possible to showthat storage proteins bind in a pH-dependent manner to the membranesof the secretory pathway with a pH optimum in the range of thelumenal pH of the Golgi cisternae. Through reconstitution experiments,it was possible to demonstrate further that this recruitmentoccurs via the interaction of peripheral rather than intrinsicmembrane proteins. Results of co-immunoprecipitation experimentspoint to interactions between different storage proteins inthe secretory system. These results are discussed in terms ofthe aggregation-mediated sorting of storage proteins into maturingdense vesicles. Key words: Dense vesicles, Golgi apparatus, legumin, pea, receptor, sorting Received 22 January 2008; Revised 22 January 2008 Accepted 23 January 2008     

Effects of postmortem storage temperature on sea bass (Dicentrarchus labrax) muscle protein degradation: analysis by 2-D DIGE and MS

Storage conditions are known to be important for postmortem deterioration of fish muscle, and temperature is one of the factors with the strongest impact on this process. In order to shed light on the influence of temperature on the status of sea bass (Dicentrarchus labrax) muscle proteins during postmortem storage, a 2-D DIGE and mass spectrometry study was performed on fish kept at either 1 or 18°C for 5 days. As expected, the greatest alterations in sea bass filet protein composition were observed upon postmortem storage at 18°C, with distinct changes appearing in the 2-D protein profile after 5 days of storage at this temperature. In particular, degradation of the myofibrillar protein myosin heavy chain and of the glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase, among the most abundant muscle proteins, could be clearly observed upon storage at higher temperatures. Although to a lesser extent, however, several proteins were observed to vary in abundance also upon storage for 5 days at 1°C. In particular, one of the most interesting observations was the rapid and significant decrease in the abundance of nucleoside diphosphate kinase B and phosphoglycerate mutase 2, which was observed also at low storage temperatures and appeared to be temperature-independent. The results of this study offer new knowledge on changes occurring in sea bass muscle proteins during postmortem storage at different temperatures and provide indications on protein degradation trends that might be useful for monitoring freshness of fish and quality of storage conditions.     

FUNGAL ROTS OF APPLES WITH SPECIAL REFERENCE TO GLOEOSPORIUM SPP.

The storage of fruit under artificial conditions has increased considerably during the past thirty years despite the high capital charges and expense required for the erection and maintenance of the storage chambers. In 1925 there was storage space for 2570 tons of apples, whereas in 1950 this had increased to space for approximately 85,000 tons, consisting mainly of refrigerated gas-storage installations. This total is equivalent to 5,000,000 bushels and does not include the large quantities of fruit stored under 'barn' conditions or the more recently introduced 'moss' storage system.