Role of Tropomyosin in Formin-mediated Contractile Ring Assembly in Fission Yeast

Like animal cells, fission yeast divides by assembling actin filaments into a contractile ring. In addition to formin Cdc12p and profilin, the single tropomyosin isoform SpTm is required for contractile ring assembly. Cdc12p nucleates actin filaments and remains processively associated with the elongating barbed end while driving the addition of profilin-actin. SpTm is thought to stabilize mature filaments, but it is not known how SpTm localizes to the contractile ring and whether SpTm plays a direct role in Cdc12p-mediated actin polymerization. Using “bulk” and single actin filament assays, we discovered that Cdc12p can recruit SpTm to actin filaments and that SpTm has diverse effects on Cdc12p-mediated actin assembly. On its own, SpTm inhibits actin filament elongation and depolymerization. However, Cdc12p completely overcomes the combined inhibition of actin nucleation and barbed end elongation by profilin and SpTm. Furthermore, SpTm increases the length of Cdc12p-nucleated actin filaments by enhancing the elongation rate twofold and by allowing them to anneal end to end. In contrast, SpTm ultimately turns off Cdc12p-mediated elongation by “trapping” Cdc12p within annealed filaments or by dissociating Cdc12p from the barbed end. Therefore, SpTm makes multiple contributions to contractile ring assembly during and after actin polymerization.     

Tropomyosin and Myosin-II Cellular Levels Promote Actomyosin Ring Assembly in Fission Yeast

Myosin-II (Myo2p) and tropomyosin are essential for contractile ring formation and cytokinesis in fission yeast. Here we used a combination of in vivo and in vitro approaches to understand how these proteins function at contractile rings. We find that ring assembly is delayed in Myo2p motor and tropomyosin mutants, but occurs prematurely in cells engineered to express two copies of myo2. Thus, the timing of ring assembly responds to changes in Myo2p cellular levels and motor activity, and the emergence of tropomyosin-bound actin filaments. Doubling Myo2p levels suppresses defects in ring assembly associated with a tropomyosin mutant, suggesting a role for tropomyosin in maximizing Myo2p function. Correspondingly, tropomyosin increases Myo2p actin affinity and ATPase activity and promotes Myo2p-driven actin filament gliding in motility assays. Tropomyosin achieves this by favoring the strong actin-bound state of Myo2p. This mode of regulation reflects a role for tropomyosin in specifying and stabilizing actomyosin interactions, which facilitates contractile ring assembly in the fission yeast system.     

Roles of the TRAPP-II Complex and the Exocyst in Membrane Deposition during Fission Yeast Cytokinesis

The cleavage-furrow tip adjacent to the actomyosin contractile ring is believed to be the predominant site for plasma-membrane insertion through exocyst-tethered vesicles during cytokinesis. Here we found that most secretory vesicles are delivered by myosin-V on linear actin cables in fission yeast cytokinesis. Surprisingly, by tracking individual exocytic and endocytic events, we found that vesicles with new membrane are deposited to the cleavage furrow relatively evenly during contractile-ring constriction, but the rim of the cleavage furrow is the main site for endocytosis. Fusion of vesicles with the plasma membrane requires vesicle tethers. Our data suggest that the transport particle protein II (TRAPP-II) complex and Rab11 GTPase Ypt3 help to tether secretory vesicles or tubulovesicular structures along the cleavage furrow while the exocyst tethers vesicles at the rim of the division plane. We conclude that the exocyst and TRAPP-II complex have distinct localizations at the division site, but both are important for membrane expansion and exocytosis during cytokinesis.     

TOR Signaling in Fission Yeast

Fission yeast has two TOR kinases, Tor1 and Tor2. Recent studies have indicated that this microbe has a TSC/Rheb/TOR pathway like higher eukaryotes. Two TOR complexes, namely TORC1 and TORC2, have been identified in this yeast, as in budding yeast and mammals. Fission yeast TORC1, which contains Tor2, and TORC2, which contains Tor1, apparently have opposite functions with regard to the promotion of G1 arrest and sexual development. Rapamycin does not inhibit growth of wild-type fission yeast cells, unlike other eukaryotic cells, but precise analyses have revealed that rapamycin affects certain cellular functions involving TOR in this yeast. It appears that fission yeast has a potential to be an ideal model system to investigate the TOR signaling pathways.     

A Mammalian-Like DNA Damage Response of Fission Yeast to Nucleoside Analogs

Nucleoside analogs are frequently used to label newly synthesized DNA. These analogs are toxic in many cells, with the exception of the budding yeast. We show that Schizosaccharomyces pombe behaves similarly to metazoans in response to analogs 5-bromo-2′-deoxyuridine (BrdU) and 5-ethynyl-2′-deoxyuridine (EdU). Incorporation causes DNA damage that activates the damage checkpoint kinase Chk1 and sensitizes cells to UV light and other DNA-damaging drugs. Replication checkpoint mutant cds1Δ shows increased DNA damage response after exposure. Finally, we demonstrate that the response to BrdU is influenced by the ribonucleotide reductase inhibitor, Spd1, suggesting that BrdU causes dNTP pool imbalance in fission yeast, as in metazoans. Consistent with this, we show that excess thymidine induces G1 arrest in wild-type fission yeast expressing thymidine kinase. Thus, fission yeast responds to nucleoside analogs similarly to mammalian cells, which has implications for their use in replication and damage research, as well as for dNTP metabolism.     

Antagonistic Roles of PP2A-Pab1 and Etd1 in the Control of Cytokinesis in Fission Yeast

In Schizosaccharomyces pombe, Etd1 is a positive regulator of the septation initiation network (SIN), a conserved GTPase-regulated kinase cascade that triggers cytokinesis. Here we show that a mutation in the pab1 gene, which encodes the B-regulatory subunit of the protein phosphatase 2A (PP2A), suppresses mutations in the etd1 gene. Etd1 is required for the function of the GTPase Spg1, a key regulator of SIN signaling. Interestingly, the loss of Pab1 function restored the activity of Spg1 in Etd1-deficient cells. This result suggests that PP2A-Pab1–mediated dephosphorylation inhibits Spg1, thus antagonizing Etd1 function. The loss of pab1 function also rescues the lethality of mutants of other genes in the SIN cascade such as mob1, sid1, and cdc11. Two-hybrid assays indicate that Pab1 physically interacts with Mob1, Sid1, Sid2, and Cdc11, suggesting that the phosphatase 2A B-subunit is a component of the SIN complex. Together, our results indicate that PP2A-Pab1 plays a novel role in cytokinesis, regulating SIN activity at different levels. Pab1 is also required to activate polarized cell growth. Thus, PP2A-Pab1 may be involved in coordinating polar growth and cytokinesis.THE fission yeast Schizosaccharomyces pombe is a leading experimental model for eukaryotic cytokinesis (Bathe and Chang 2009; Pollard and Wu 2010). Fission yeast cells grow in a polarized manner by elongation at the cell ends and divide during cytokinesis by the action of a contractile actomyosin ring assembled in the middle of the cell (Snell and Nurse 1993). At the end of mitosis, when nuclear separation has been completed, actomyosin ring constriction is triggered by the septation initiation network (SIN). This signal transduction cascade is composed of the GTPase Spg1 and three protein kinases—Cdc7, GC-kinase Sid1, and NDR-kinase Sid2 in their presumed order of action—and the associated proteins Cdc14 with Sid1 and Mob1 with Sid2. These proteins are all located at the spindle pole body (SPB) during mitosis on a scaffold composed of the coiled-coil proteins Sid4 and Cdc11 (Krapp et al. 2004). The Sid2-Mob1 protein kinase complex is thought to transmit the division signal from the SPB to the actomyosin ring since it also associates at the division site during septation (Krapp and Simanis 2008). The SIN triggers actomyosin ring contraction coordinated with the synthesis of the primary and secondary septa that will form the new cell wall (Krapp et al. 2004; Wolfe and Gould 2005). The small GTPase Rho1 is known to promote cell-wall formation at the division site by stimulation of Cps1p/Drc1 1,3-β-glucan synthase (Le Goff et al. 1999), but the mechanism remains unclear.SIN activity is tightly regulated during the cell cycle to ensure proper coordination of mitosis and cytokinesis. Mutants that negatively affect SIN function undergo nuclear division in the absence of septation, while increased SIN activity induces septation in interphase cells (Krapp and Simanis 2008). Regulation of the SIN is complex, involving multiple, partially redundant mechanisms, but the nucleotide status of the Ras superfamily small GTPase, Spg1, represents a key step in SIN activity (Lattmann et al. 2009). Cdc16 and Byr4 form a two-component GTPase-activating protein (GAP) for Spg1 that inhibits its activity (Furge et al. 1998; Cerutti and Simanis 1999). Proteins acting as a guanine nucleotide-exchange factor (GEF) for this GTPase have not been identified. In the budding yeast Saccharomyces cerevisiae, the pathway analogous to the SIN is known as the mitotic exit network (MEN) (reviewed in Krapp and Simanis 2008). Contact between the SPB-localized GTPase Tem1 (the Spg1 homolog) with its putative GEF Lte1, which is present only within the bud, has been proposed as a mechanism to ensure that mitotic exit occurs only after the spindle has oriented correctly (Bardin et al. 2000; Pereira et al. 2000). Bfa1-Bub2 (the Cdc16-Byr4 equivalent) are negative regulators of the MEN, acting as a two-component GAP for Tem1 (Geymonat et al. 2002).Etd1 was identified in a genetic screen searching for new regulators of the S. pombe cell division cycle (Jimenez and Oballe 1994). Further characterization indicated that Etd1 acts as a positive regulator of the SIN (Daga et al. 2005). A recent study has established a key role for Etd1 in the timing of cytokinesis via the regulation of Spg1, acting as a potential homolog of budding yeast Lte1 (Garcia-Cortes and McCollum 2009). Loss of Etd1 function can be suppressed by mutations in a number of genes, some of which are involved in morphogenesis (Jimenez and Oballe 1994). Here we show that one of the mutations that bypass the requirement for etd1 in cytokinesis affects the activity of pab1, which encodes the protein phosphatase 2A (PP2A) regulatory subunit B. The characterization of Pab1 and pab1 mutants described in this study reveals a novel role for PP2A-Pab1 in SIN regulation and provides new insight into the mechanism by which Etd1 might regulate SIN signaling. We also show that Pab1 participates in activation of the morphological pathway, suggesting a role for PP2A-Pab1 in the coordination of cytokinesis and morphogenesis.     

A Molecular Genetic Approach to Understanding the Evolution of Immunoglobulin Gene Structure and Diversity

Immune function in higher vertebrates is mediated primarilyby multimeric glycoproteins found in the serum and on the surfacesof lymphoid cells. These molecules possess common structuralfeatures suggesting that they belong to a supergene family whichmay have originated from a common ancestral gene. Some multigenicmembers of the supergene family undergo unique forms of chromosomalrearrangement during somatic development. We have identifiedimmunoglobulin heavy chainvariable region (V_H) homologs in speciesrepresenting critical points in the vertebrate radiation, examinedtheir nucleotide sequences and found high degrees of organizationalhomology as well as localized regions of extended nucleotide(and amino acid) sequence identity with mammalian V_H genes.The unexpected high degree of nucleotide sequence identity suggeststhat within this multigene family, selection may be operatingat both the DNA and polypeptide levels.Using several differentapproaches, the V_H gene families in lower vertebrates have beenshown to be remarkably complex, discounting the possibilitythat a reduced number of germline genes accounts for the apparentlyrestricted natureof lower vertebrate immune responses. The lowervertebrate germline V_H genes possess prototypic recombinationsignal sequences, implicated in the somatic reorganization ofmammalian immunoglobulin variable region genes, and segmentalreorganizationresembling that seen in mammals has been observed in an elasmobranch.The detection of a recombination element flanked by short, directrepeats within the intervening sequence of one reptilian V_Hgene suggests that these sequences may be mobile, perhaps functioningoutside of the immunoglobulin loci in other developmental processes.The complex nature of the variable region gene families andtheir capacity to undergo structural change during somatic developmentsuggest that unique genetic mechanisms may govern their evolutionarystabilization and diversification.     

Hyphal Growth in the Fission Yeast Schizosaccharomyces pombe

The fission yeast Schizosaccharomyces pombe grows in a single-celled form or can mate and undergo meiosis and sporulation. Here we show that wild-type S. pombe can also differentiate to form elaborately branched hyphae which invade deep into solid medium. Branches appear in the hyphae adjacent to unseparated septa. Electron microscopy reveals unusual multivesicular structures within the hyphae. Nitrogen deprivation appears to be the main stimulus for hyphal growth. No mitogen-activated protein kinase is necessary for the response. Inhibition of cyclic AMP (cAMP) production or signaling prevents the response, and exogenous cAMP promotes it, suggesting that detection of a good carbon source is required for hyphal growth but not for mating.     

Microscopy of Fission Yeast Sexual Lifecycle

The fission yeast Schizosaccharomyces pombe has been an invaluable model system in studying the regulation of the mitotic cell cycle progression, the mechanics of cell division and cell polarity. Furthermore, classical experiments on its sexual reproduction have yielded results pivotal to current understanding of DNA recombination and meiosis. More recent analysis of fission yeast mating has raised interesting questions on extrinsic stimuli response mechanisms, polarized cell growth and cell-cell fusion. To study these topics in detail we have developed a simple protocol for microscopy of the entire sexual lifecycle. The method described here is easily adjusted to study specific mating stages. Briefly, after being grown to exponential phase in a nitrogen-rich medium, cell cultures are shifted to a nitrogen-deprived medium for periods of time suited to the stage of the sexual lifecycle that will be explored. Cells are then mounted on custom, easily built agarose pad chambers for imaging. This approach allows cells to be monitored from the onset of mating to the final formation of spores.     

A Rapid Method for Protein Extraction from Fission Yeast

Researchers working with fission yeast conduct protein extraction widely and frequently, but this includes the handling of glass beads, and hence is laborious and cumbersome, especially when dealing with a large number of samples. Here we describe a rapid and reliable method for preparing protein extract from fission yeast, one which is applicable to routine western blotting.     

A Chromatin-remodeling Protein Is a Component of Fission Yeast Mediator

The multiprotein Mediator complex is an important regulator of RNA polymerase II-dependent genes in eukaryotic cells. In contrast to the situation in many other eukaryotes, the conserved Med15 protein is not a stable component of Mediator isolated from fission yeast. We here demonstrate that Med15 exists in a protein complex together with Hrp1, a CHD1 ATP-dependent chromatin-remodeling protein. The Med15-Hrp1 subcomplex is not a component of the core Mediator complex but can interact with the L-Mediator conformation. Deletion of med15⁺ and hrp1⁺ causes very similar effects on global steady-state levels of mRNA, and genome-wide analyses demonstrate that Med15 associates with a distinct subset of Hrp1-bound gene promoters. Our findings therefore indicate that Mediator may directly influence histone density at regulated promoters.