Mortality Due to Malignant and Non-Malignant Diseases in Korean Professional Emergency Responders

ObjectiveThis study was conducted to estimate the cause-specific mortality in male emergency responders (ER), compare with that of Korean men. Mortality was also compared between more experienced firefighters (i.e., firefighters employed ≥20 years and firefighters employed ≥10 to <20 years) and less experienced firefighters and non-firefighters (i.e., firefighters employed <10 years and non-firefighters) to investigate associations between mortality and exposure to occupational hazards.MethodsThe cohort was comprised of 33,442 males who were employed as ERs between 1980 and 2007 and not deceased as of 1991. Work history was merged with the death registry from the National Statistical Office of Korea to follow-up on mortality between 1992 and 2007. Standardized mortality ratios (SMR) for ERs were calculated in reference to the Korean male population. Adjusted relative risks (ARRs) of mortalities for firefighters employed ≥20 years and ≥10 years to <20 years were calculated in reference to non-firefighters and firefighters employed < 10 years.ResultsOverall (SMR=0.43, 95%CI=0.39–0.47) and some kinds of cause-specific mortalities were significantly lower among ERs compared with the Korean male population. No significant increase in mortality was observed across the major ICD-10 classifications among ERs. Mortality due to exposure to smoke, fire, and flames (SMR=3.11, 95% CI=1.87–4.85), however, was significantly increased among ERs. All-cause mortality (ARR=1.46, 95% CI=1.13–1.89), overall cancer mortality (ARR=1.54, 95% CI=1.02–2.31) and mortality of external injury, poisoning and external causes (ARR=3.13, 95% CI=1.80–5.46) were significantly increased among firefighters employed ≥20 years compared to those of non-firefighters and firefighters employed < 10 years.ConclusionsAn increase in mortality due to all cancer and external injury, poisoning, and external causes in firefighters employed ≥20 years compared with non-firefighters and firefighters employed <10 years suggests occupational exposure.     

华南桉树人工林树液流通量及蒸散作用

通过对广东省湛江市雷州半岛桉树(Eucalyptus urophylla S.T.Blake)人工林的树液流通量、环境因子、土壤蒸发、林冠截留和林分特性相关指标一年多的连续观测,以及通过一个理论公式对日蒸散量的计算,得出了如下结论:(1)土壤特性及由此决定的土壤水势对树液流通量,以及树液流通量密度(SFD)与气温的关系有一定影响;(2)林冠层的VPD(空气饱和差)对SFD有显著影响;(3)由测定和计算得来的蒸散量在河头和纪家分别有5.26%和6.14%的偏差,可以认为这两种方法有较好的一致性;(4)河头和纪家的林分蒸腾量占总蒸散量百分比分别为62.2%和51.3%;(5)树种单位叶面积水平上的SFD是评价该树种水分利用的重要指标.     

华南桉树人工林树液流通量及蒸散作用(英文)

通过对广东省湛江市雷州半岛桉树(Eucalyptus urophylla S.T.Blake)人工林的树液流通量、环境因子、土壤蒸发、林冠截留和林分特性相关指标一年多的连续观测,以及通过一个理论公式对日蒸散量的计算,得出了如下结论:(1)土壤特性及由此决定的土壤水势对树液流通量,以及树液流通量密度(SFD)与气温的关系有一定影响;(2)林冠层的VPD(空气饱和差)对SFD有显著影响;(3)由测定和计算得来的蒸散量在河头和纪家分别有5.26％和6.14％的偏差,可以认为这两种方法有较好的一致性;(4)河头和纪家的林分蒸腾量占总蒸散量百分比分别为62.2％和51.3％;(5)树种单位叶面积水平上的SFD是评价该树种水分利用的重要指标。     

Nitrogen and Phosphorus Release from Decomposing Leaves under Sub‐Humid Tropical Conditions1

For many soils of the tropics, inputs of organic materials are essential to sustain soil fertility and crop production. Research in the quality of organic inputs, a key factor controlling rates of decomposition and nutrient release, continues to guide selection and use of organic materials as nutrient sources. The relationship between decomposition patterns and the quality parameters of the fresh leaves of six agroforestry species: Sesbania sesban, Croton megalocarpus, Calliandra calothyrsus, Tithonia diversifolia, Lantana camara, and Senna spectabilis, was investigated in a litterbag study over a period of 77 days in the highlands of western Kenya. The litterbags were buried 1 cm below the soil surface and covered with soil of ca 1 cm thickness. Percent leaf mass and total N and P that remained with time strongly correlated with total P and C/P ratio (R²= 0.60‐0.90) during the first 35 days of study; but afterwards, correlation was stronger with the initial soluble polyphenolics (Pp)/P ratio (R²= 0.69‐0.92) than with total P and C/P ratio. Loss of leaf mass and release of N and P followed the exponential function, y_t= y₀* e‐^kt, from which the specific decay rate constants (k) were calculated for loss of leaf mass (k_B) and release of N (k_N) and P (K_p). Among the plant species, the k values were lowest in Calliandra with k_B= 0.012/d, k_N= 0.017/d and k_p= 0.044/d. Lantana had the highest K values with k_g= 0.067/d and k_p= 0.119/d, but the highest k_N value of 0.109/d occurred in Tithonia. The k_B values for all organic materials were lower than their corresponding k_N and k_p values, suggesting that leaching of N and P from litters may have augmented the microbial mineralization of N and P. There was a strong correlation between the k_B, k_N, and k_p values and total P (r = 0.82‐0.96; P 0.01), but not total N, lignin (LIG), or Pp. Rates of N and P release followed the general trend: Tithonia > Senna > Lantana > Sesbania > Croton > Calliandra. The results indicated that, among the quality parameters studied, total P is the most important factor controlling rate of decomposition and N and P release from organic inputs in the area of study.     

Microbial Diversity and Parasitic Load in Tropical Fish of Different Environmental Conditions

In this study we analysed fecal bacterial communities and parasites of three important Indonesian fish species, Epinephelus fuscoguttatus, Epinephelus sexfasciatus and Atule mate. We then compared the biodiversity of bacterial communities and parasites of these three fish species collected in highly polluted Jakarta Bay with those collected in less polluted Indonesian areas of Cilacap (E. sexfasciatus, A. mate) and Thousand Islands (E. fuscoguttatus). In addition, E. fuscoguttatus from net cages in an open water mariculture facility was compared with free living E. fuscoguttatus from its surroundings. Both core and shared microbiomes were investigated. Our results reveal that, while the core microbiomes of all three fish species were composed of fairly the same classes of bacteria, the proportions of these bacterial classes strongly varied. The microbial composition of phylogenetically distant fish species, i.e. A. mate and E. sexfasciatus from Jakarta Bay and Cilacap were more closely related than the microbial composition of more phylogentically closer species, i.e. E. fuscoguttatus, E. sexfasciatus from Jakarta Bay, Cilacap and Thousand Islands. In addition, we detected a weak negative correlation between the load of selected bacterial pathogens, i.e. Vibrio sp. and Photobacterium sp. and the number of endoparasites. In the case of Flavobacterium sp. the opposite was observed, i.e. a weak positive correlation. Of the three recorded pathogenic bacterial genera, Vibrio sp. was commonly found in E. fuscoguttatus from mariculture, and lessly in the vicinity of the net cages and rarely in the fishes from the heavily polluted waters from Jakarta Bay. Flavobacterium sp. showed higher counts in mariculture fish and Photobacteria sp. was the most prominent in fish inside and close to the net cages.     

Acetylcholine and Choline in Neuronal Tissue Measured by HPLC with Electrochemical Detection

Abstract: A simple, rapid method is presented for the determination of acetylcholine (ACh) and choline (Ch) in neuronal tissue using HPLC with electrochemical detection. The method is based on the separation of ACh and Ch by reverse-phase HPLC and mixing the effluent as it emerges from the column with acetylcholinesterase and Ch oxidase, which converts endogenous Ch and Ch produced by the hydrolysis of ACh to betaine and hydrogen peroxide. Production of hydrogen peroxide is continuously monitored electrochemically. The sensitivity of the procedure is 1 pmol for Ch and 2 pmol for ACh. Specificity of the method is based on HPLC, two specific enzymatic reactions, and the detection of hydrogen peroxide.     

An Improved Method with High Anti-interference Ability for R Peak Detection in Wearable Devices

The rapid development of the wearable electrocardiogram monitoring equipment increases the requirements for R peak detection in wearable devices. An improved method called ISC algorithm is proposed with high anti-interference ability for R peak detection in wearable devices based on a simple basic algorithm called SC algorithm. The proposed method is characterized by using the updated amplitude selection threshold, updated slope comparison threshold and RR interval judgement to reduce false positives and false negatives. For data from MIT-BIH Arrhythmia Database, the positive predictivity P+ of ISC algorithm can reach 99.12%, and the sensitivity Se of ISC algorithm is more than 95%. For MIT-BIH Noise Stress Test Database, the accuracy of ISC algorithm for both sensitivity Se and positive predictivity P+ can exceed 94% under three common noise, baseline wander, muscle artifact, and electrode motion artifact, where the positive predictivity P+ of ISC algorithm is 44.46% higher than that of SC algorithm on average. For wearable devices in exercise, even under the exercise intensity of 7 km per hour, the average positive predictivity P+ of ISC algorithm is 99.32%, which is 60.93% higher than that of SC algorithm. The high anti-interference ability shows that ISC algorithm is suitable for R peak detection in wearable devices.     

Detection of Xylem Cavitation in Corn under Field Conditions

We report the detection of cavitation events in corn (Zea mays) plants growing under field conditions in Greeley, CO. To our knowledge this study reports the first successful attempt to monitor continuously for long periods the cavitation events of a crop plant using acoustic detection techniques. Cavitation events occur in corn plants using acoustic detection techniques. Cavitation events occur in corn plants irrigated daily when the xylem pressure potentials fall below about −1.0 megapascals. In unirrigated corn we estimate that approximately half of all vessels cavitate on any one day when xylem pressure potentials fall below about −1.8 megapascals. We postulate that root pressure developed every night in irrigated and unirrigated corn is adequate to rejoin cavitated water columns.     

Circadian Rhythms: Influences of Internal and External Factors on the Period Measured in Constant Conditions1

The article reviews most of the data available on the period ? of freerunning circadian rhythms, measured in constant conditions. Emphasis is placed on the effects of light intensity and ambient temperature on ?, with references to influences of other external as well as internal factors. In the introduction, examples are given of spontaneous and induced variations in ? and its dependence on the experimental history. The discussion concentrates' largely on results obtained from arthropods and vertebrates.     

Multiplexing of ChIP-Seq Samples in an Optimized Experimental Condition Has Minimal Impact on Peak Detection

Multiplexing samples in sequencing experiments is a common approach to maximize information yield while minimizing cost. In most cases the number of samples that are multiplexed is determined by financial consideration or experimental convenience, with limited understanding on the effects on the experimental results. Here we set to examine the impact of multiplexing ChIP-seq experiments on the ability to identify a specific epigenetic modification. We performed peak detection analyses to determine the effects of multiplexing. These include false discovery rates, size, position and statistical significance of peak detection, and changes in gene annotation. We found that, for histone marker H3K4me3, one can multiplex up to 8 samples (7 IP + 1 input) at ~21 million single-end reads each and still detect over 90% of all peaks found when using a full lane for sample (~181 million reads). Furthermore, there are no variations introduced by indexing or lane batch effects and importantly there is no significant reduction in the number of genes with neighboring H3K4me3 peaks. We conclude that, for a well characterized antibody and, therefore, model IP condition, multiplexing 8 samples per lane is sufficient to capture most of the biological signal.     

Distribution of Epilithic Diatoms in Response to Environmental Conditions in an Urban Tropical Stream, Central Kenya

Use of diatoms in monitoring water quality is well acknowledged in developed countries, but only recently has the assessment started gaining importance in developing countries. Diatoms can be obtained from natural and artificial substrates. Appreciating the differences and similarities of diatom assemblages on both substrates may contribute to a better understanding and standardization particularly during monitoring of water quality. During this study we assessed diatom assemblages, biodiversity and trophic indices in relation to water quality along the Nairobi River. Fifteen sites were sampled in September 2000 during the dry season. Diatoms were collected from natural substrates (stones, pebbles) and artificial substrates (100% acrylic wool). On artificial and natural substrates, a total of 190 and 151 taxa were found, respectively, the majority of these taxa (80%) have cosmopolitan distribution and are also widespread throughout tropical African. Species composition changed downstream, five taxa dominated upper and mid stream sites whereas lower stream sites were dominated by one or two taxa. Species richness, diversity, dominance and evenness were positively correlated with NO₃, O₂ and altitude but decreased markedly downstream with a simultaneous increase in total dissolved solids, alkalinity, chemical oxygen demand and PO₄. Ordination and classification (CANOCO and TWINSPAN) showed that diatom assemblages in the Nairobi River responded strongly to water quality changes with respect to concentrations of NO₃, NO₂, total dissolved solids and temperature. Taxa common at less impacted upstream sites included Gomphonema gracilis, Anomoeoneis brachysira and Fragilaria biceps; while common taxa at midstream sites with agricultural catchments were Gomphonema parvulum, Navicula cryptocephala, N. schroeteri, N. bryophila, N. halophila, Nitzschia linearis var. linearis and Cymbella silesica. Achnanthes minutissima var. saprophila, Gomphonema angustum, Navicula subminuscula, N. arvensis, Nitzschia palea and N. umbonata were most common at urban sites, which were polluted by residential and industrial effluents. Trophic diatom indices suggested that water quality was poor at most sites in the Nairobi River. Most sites along the river had low Generic Diatom Index values, GDI (<12) and high Trophic Diatom Index values, TDI 73–78 (median = 76) and 75–84 (median = 77) for artificial and natural substrates, respectively. This study showed that diatoms' response on natural and artificial substrates were similar and reflected environmental conditions correctly.     

Temporal Patterns in Seawater Quality from Dredging in Tropical Environments

Maintenance and capital dredging represents a potential risk to tropical environments, especially in turbidity-sensitive environments such as coral reefs. There is little detailed, published observational time-series data that quantifies how dredging affects seawater quality conditions temporally and spatially. This information is needed to test realistic exposure scenarios to better understand the seawater-quality implications of dredging and ultimately to better predict and manage impacts of future projects. Using data from three recent major capital dredging programs in North Western Australia, the extent and duration of natural (baseline) and dredging-related turbidity events are described over periods ranging from hours to weeks. Very close to dredging i.e. <500 m distance, a characteristic features of these particular case studies was high temporal variability. Over several hours suspended sediment concentrations (SSCs) can range from 100–500 mg L-1. Less turbid conditions (10–80 mg L-1) can persist over several days but over longer periods (weeks to months) averages were <10 mg L-1. During turbidity events all benthic light was sometimes extinguished, even in the shallow reefal environment, however a much more common feature was very low light ‘caliginous’ or daytime twilight periods. Compared to pre-dredging conditions, dredging increased the intensity, duration and frequency of the turbidity events by 10-, 5- and 3-fold respectively (at sites <500 m from dredging). However, when averaged across the entire dredging period of 80–180 weeks, turbidity values only increased by 2–3 fold above pre-dredging levels. Similarly, the upper percentile values (e.g., P99, P95) of seawater quality parameters can be highly elevated over short periods, but converge to values only marginally above baseline states over longer periods. Dredging in these studies altered the overall probability density distribution, increasing the frequency of extreme values. As such, attempts to understand the potential biological impacts must consider impacts across telescoping-time frames and changes to extreme conditions in addition to comparing central tendency (mean/median). An analysis technique to capture the entire range of likely conditions over time-frames from hours to weeks is described using a running means/percentile approach.     

DNA条形码在热带龙脑香科树种鉴定中的应用

龙脑香科植物是东南亚地区重要的热带木材来源树种, 对其开展DNA条形码评估在林业监管及森林资源保护等方面具有非常重要的实际应用价值。通过对龙脑香科植物样品进行rbcL、matK、trnL-trnF和ITS2四个片段的扩增和测序, 结合GenBank下载的数据, 共获得龙脑香科树种14属244种共计899条序列。通过比较4个片段的通用性、序列特征、种内和种间的遗传变异, 基于Best Match (BM)、Best Close Match (BCM)、相似性搜索算法(BLAST)和邻接树(NJ) 4种方法评估DNA条形码对于龙脑香科树种的鉴定能力。结果表明, ITS2在龙脑香科树种中鉴定效率最高, 通过优化的扩增体系能够从该科植物叶片中获得较高质量的ITS2片段; 叶绿体matK片段扩增和测序效率为100%, 且种内及种间遗传变异明显, 鉴定成功率高于其它叶绿体片段, 并据此提出ITS2和matK适合作为龙脑香科树种的DNA条形码。     

DNA条形码在热带龙脑香科树种鉴定中的应用

龙脑香科植物是东南亚地区重要的热带木材来源树种, 对其开展DNA条形码评估在林业监管及森林资源保护等方面具有非常重要的实际应用价值。通过对龙脑香科植物样品进行rbcL、matK、trnL-trnF和ITS2四个片段的扩增和测序, 结合GenBank下载的数据, 共获得龙脑香科树种14属244种共计899条序列。通过比较4个片段的通用性、序列特征、种内和种间的遗传变异, 基于Best Match (BM)、Best Close Match (BCM)、相似性搜索算法(BLAST)和邻接树(NJ) 4种方法评估DNA条形码对于龙脑香科树种的鉴定能力。结果表明, ITS2在龙脑香科树种中鉴定效率最高, 通过优化的扩增体系能够从该科植物叶片中获得较高质量的ITS2片段; 叶绿体matK片段扩增和测序效率为100%, 且种内及种间遗传变异明显, 鉴定成功率高于其它叶绿体片段, 并据此提出ITS2和matK适合作为龙脑香科树种的DNA条形码。