Culturable Heterotrophic Bacteria Associated with Healthy and Bleached Scleractinian Madracis decactis and the Fireworm Hermodice carunculata from the Remote St. Peter and St. Paul Archipelago, Brazil

We report on the first characterization of the culturable heterotrophic bacteria of the scleractinian Madracis decactis. In addition, we characterized the culturable bacteria associated with the fireworm Hermodice carunculata, observed predating partially bleached coral colonies. Our study was carried out in the remote St. Peter and St. Paul Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. We constituted a 403 isolates collection and subsequently characterized it by means of pyrH and 16S rRNA partial sequences. We identified Photobacterium, Bacillus, and Vibrio species as members of the culturable microbiota of healthy M. decactis. V. campbellii, V. harveyi, V. communis, and V. maritimus were the most commonly found Vibrio species in healthy corals, representing more than 60 % of all vibrio isolates. Most of the vibrios isolated from the fireworm’s tissues (n = 143; >90 %) were identified as V. shiloi. However, we did not recover V. shiloi from bleached M. decactis. Instead, we isolated V. communis, a novel Photobacterium species, Bacillus, Kocuria, and Pseudovibrio, suggesting a possible role of other facultative anaerobic bacteria and/or environmental features (such as water quality) in the onset of bleaching in SPSPA’s M. decactis.     

Morphological and karyotypic differentiation in Caranx lugubris (Perciformes: Carangidae) in the St. Peter and St. Paul Archipelago,mid-Atlantic Ridge

Isolated oceanic islands constitute interesting model systems for the study of colonization processes, as several climatic and oceanographic phenomena have played an important role in the history of the marine ichthyofauna. The present study describes the presence of two morphotypes of Caranx lugubris, in the St. Peter and St. Paul Archipelago located in the mid-Atlantic. Morphotypes were compared in regard to their morphological and cytogenetic patterns, using C-banding, Ag-NORs, staining with CMA₃/DAPI fluorochromes and chromosome mapping by dual-color FISH analysis with 5S rDNA and 18S rDNA probes. We found differences in chromosome patterns and marked divergence in body patterns which suggest that different populations of the Atlantic or other provinces can be found in the Archipelago of St. Peter and St. Paul.     

Thelypteris amazonica sp. nov. (Thelypteridaceae) from Amazonian Brazil

A new species of Thelypteris subgenus Goniopteris (Thelypteridaceae) is described and illustrated: Thelypteris amazonica Salino & R. S. Fernandes is apparently most similar to Thelypteris anoptera (Kunze) C. Chr. (Brazil‐Bahia) and T. abrupta (Desv.) Proctor (Antilles, Central America, South America), but differs from both by the clavate vein ends, basal vein pairs from adjacent segments not united below the sinuses, and petioles with simple and stellate hairs. Thelypteris amazonica is known only from Amazonian Brazil.     

Mollugo brasiliensis sp. nov. (Molluginaceae) from eastern Brazil

The new species Mollugo brasiliensis Thulin & Harley, a perennial viscous herb with 6–8 stamens, few‐seeded capsules and tuberculate seeds, is described from eastern Brazil. It is compared primarily with the two other native members of Molluginaceae previously known from Brazil, M. verticillata L. and Glischrothamnus ulei Pilger.     

Aristolochia zebrina sp. nov. (Aristolochiaceae) from southeastern Brazil

Aristolochia zebrina is described, illustrated and discussed in comparison with the two most similar species, A. papillaris Mast. and A. tamnifolia (Klotzsch) Duch. The new species is distinguished from its relatives mainly by the ellipsoid utricle, the narrowly ovate, revolute, and efimbriate floral limb with dark purple longitudinal stripes inside, and the glabrous and smooth capsules, which are broadly cylindrical. So far, the new species has only been found in ‘restingas’ (sandy soils) and wet tropical Tabuleiro forests in northern Espírito Santo, southeastern Brazil.     

Maranta rugosa sp. nov. (Marantaceae) from central Brazil

Maranta is a neotropical genus usually found in moist and shaded habitats in pluvial to semideciduous forests and Cerrado, with diversity center in central Brazil. A new species from Mato Grosso, M. rugosa J. M. A. Braga & S. Vieira, is described and illustrated. The new species is somewhat similar to M. parvifolia Petersen with which it is compared.     

Pouzolzia saxophila sp. nov. (Urticaceae tribe Boehmerieae) from Bahia,Brazil

The paper supplements a taxonomic revision of the New World species of Pouzolzia by Wilmot‐Dear and Friis in 1996 and a supplement in 2011 with an additional new species. Here another new species of Pouzolzia, P. saxophila Friis, Wilmot‐Dear & A. K. Monro, is described from a restricted area of xerophytic scrub vegetation on rocky outcrops in the Boa Nova National Park, Bahia, Brazil. The new species is somewhat similar to P. pringlei, a Mexican endemic, and to P. amambaiensis from the Brazil–Paraguay border, but also to the widespread Asiatic P. zeylanica. However, the similarities with these species are probably due to adaptation to similar dry habitats on rocky outcrops.     

Christensonella ecallosa sp. nov. (Orchidaceae,Maxillariinae) from Guyana and Brazil

A new species of Christensonella (Orchidaceae, Maxillariinae) is described and illustrated based on herbarium material. The most important characters of Christensonella ecallosa Lipińska & Szlach. are the ovate lip, with transversely elliptic middle lobe, minutely dentate margins and very obscure lip callus, which forms an elevated thick pad near the base. Taking into account the habit, it may be misidentified as C. uncata, but they are clearly distinguished by the lip shape. The taxonomic affiliations of the new species are briefly discussed.     

Jacquemontia diamantinensis sp. nov. (Convolvulaceae) from the Chapada Diamantina,Brazil

Jacquemontia diamantinensis Buril (Convolvulaceae) described here as a new species, is endemic to the Chapada Diamantina, in Bahia, Brazil. Illustrations and a table for comparing characters with related species are provided.     

Microstachys crassifolia sp. nov. (Euphorbiaceae) from Chapada dos Veadeiros,Goiás,Brazil

Microstachys crassifolia, a new species from Chapada dos Veadeiros region in the State of Goias, central Brazil, is here described and illustrated. Its habit and general morphology resembles that of M. nana Silva & Esser, an endemic species from the State of Paraná, southern Brazil. Both species are hemicryptophytes from grasslands, with a well‐developed underground system, glabrous leaves and reddish inflorescences and fruits, but M. crassifolia has fleshy leaves without glands while M. nana has membranaceous leaves with pateliform, submarginal glands.     

Aulacoseira calypsi sp. nov. (Coscinodiscophyceae) from an Amazonian lake,northern Brazil

This paper describes a new diatom species, Aulacoseira calypsi Tremarin, Torgan & Ludwig, from specimens in plankton samples from Água Preta lake. This Amazonian lake is a shallow mesotrophic environment situated in northern Brazil. The species is characterized by long filaments united by spatulate linking spines, obovate to conic separation spines, a valve surface variably ornamented, straight striae on the mantle, a narrow ringleist, and one row of sessile rimoportulae near the ringleist. Aulacoseira calypsi's morphometric features are compared with the following similar species: Aulacoseira nygaardii (Camburn) Camburn & Charles, Aulacoseira lacustris (Grunow) Krammer, Aulacoseira coroniformis Pearce & Cremer, Aulacoseira occulta Siver & Hamilton, Aulacoseira lancea Siver & Hamilton, Aulacoseira gessneri (Hustedt) Simonsen, and Aulacoseira islandica (Müller) Simonsen. The species shares similarities as to frustule size, striation pattern, and narrowness of ringleist; but differs in the morphology of separation and linking spines, and the number and position of the rimoportulae.     

Yakushimabryum longissimum (Pylaisiadelphaceae) gen. & sp. nov., from the Yakushima Island,Japan

Abstract

Yakushimabryum longissimum gen. & sp. nov. (Pylaisiadelphaceae, Musci), is described from Yakushima Island, Japan, on the basis of morphology and rbcL data. It is characterized by more or less glossy, yellowish green living plants, naked dormant branch buds, absence of costa in the leaves, smooth and linear leaf lamina cells, alar groups composed of a number of quadrate cells arranged in a scalariform manner, ascending branches that are often elongate into slender tips, and filamentous gemmae consisting of smooth, long-rectangular cells. Molecular phylogenetic analyses suggest an affinity neither to Clastobryopsis nor Gammiella, both of which grow in similar habitats and share alar morphology and shape of propagules, but to Isocladiella and Isopterygium, both of which have filamentous pseudoparaphyllia and different types of propagules. A key to the Japanese genera of Pylaisiadelphaceae is provided.     

Metalloid Reducing Bacteria Isolated from Deep Ocean Hydrothermal Vents of the Juan de Fuca Ridge, Pseudoalteromonas telluritireducens sp. nov. and Pseudoalteromonas spiralis sp. nov

Five strains of Gram-negative, rod, curved rod and spiral-shaped bacteria were isolated from the vicinity of deep ocean hydrothermal vents along the Main Endeavour Segment of the Juan de Fuca Ridge in the Pacific Ocean. All strains showed remarkable resistance to high levels of toxic metalloid oxyanions, and were capable of reducing the oxyanions tellurite and selenite to their less toxic elemental forms. Phylogenetic analysis of four strains identified these isolates as close relatives of the genus Pseudoalteromonas within the class Gammaproteobacteria. Pseudoalteromonas agarivorans was the closest relative of strains Te-1-1 and Se-1-2-red^T, with, respectively, 99.5 and 99.8% 16S rDNA sequence similarity. Strain Te-2-2^T was most closely related to Pseudoalteromonas paragorgicola, with 99.8% 16S rDNA sequence similarity. The DNA G+C base composition was 39.6 to 41.8 mol%, in agreement with other members of the genus Pseudoalteromonas. However, the isolates showed important morphological and physiological differences from previously described species of this genus, with one group forming rod-shaped bacteria typical of Pseudoalteromonas and the other forming vibrioid- to spiral-shaped cells. Based on these differences, and on phylogenetic data, we propose the creation of the new species Pseudoalteromonas telluritireducens sp. nov., with strain Se-1-2-red^T (DSMZ=16098^T=VKM B-2382^T) as the type strain, and Pseudoalteromonas spiralis sp. nov., with strain Te-2-2^T (DSMZ=16099^T=VKM B-2383^T) as the type strain. The EMBL accession numbers for the 16S rDNA sequences are: Te-1-1, AJ314843; Te-2-2^T, AJ314842; Se-1-2-or, AJ314844; Se-1-2-red^T, AJ314845.     

Flavobacterium plurextorum sp. nov. Isolated from Farmed Rainbow Trout (Oncorhynchus mykiss)

Five strains (1126-1H-08^T, 51B-09, 986-08, 1084B-08 and 424-08) were isolated from diseased rainbow trout. Cells were Gram-negative rods, 0.7 µm wide and 3 µm long, non-endospore-forming, catalase and oxidase positive. Colonies were circular, yellow-pigmented, smooth and entire on TGE agar after 72 hours incubation at 25°C. They grew in a temperature range between 15°C to 30°C, but they did not grow at 37°Cor 42°C. Based on 16S rRNA gene sequence analysis, the isolates belonged to the genus Flavobacterium. Strain 1126-1H-08^T exhibited the highest levels of similarity with Flavobacterium oncorhynchi CECT 7678^T and Flavobacterium pectinovorum DSM 6368^T (98.5% and 97.9% sequence similarity, respectively). DNA–DNA hybridization values were 87 to 99% among the five isolates and ranged from 21 to 48% between strain 1126-1H-08^T, selected as a representative isolate, and the type strains of Flavobacterium oncorhynchi CECT 7678^T and other phylogenetic related Flavobacterium species. The DNA G+C content of strain 1126-1H-08^T was 33.2 mol%. The predominant respiratory quinone was MK-6 and the major fatty acids were iso-C_15∶0 and C_15∶0. These data were similar to those reported for Flavobacterium species. Several physiological and biochemical tests differentiated the novel bacterial strains from related Flavobacterium species. Phylogenetic, genetic and phenotypic data indicate that these strains represent a new species of the genus Flavobacterium, for which the name Flavobacterium plurextorum sp. nov. was proposed. The type strain is 1126-1H-08^T ( = CECT 7844^T = CCUG 60112^T).     

Marinobacter salarius sp. nov. and Marinobacter similis sp. nov., Isolated from Sea Water

Two non-pigmented, motile, Gram-negative marine bacteria designated R9SW1^T and A3d10^T were isolated from sea water samples collected from Chazhma Bay, Gulf of Peter the Great, Sea of Japan, Pacific Ocean, Russia and St. Kilda Beach, Port Phillip Bay, the Tasman Sea, Pacific Ocean, respectively. Both organisms were found to grow between 4°C and 40°C, between pH 6 to 9, and are moderately halophilic, tolerating up to 20% (w/v) NaCl. Both strains were found to be able to degrade Tween 40 and 80, but only strain R9SW1^T was found to be able to degrade starch. The major fatty acids were characteristic for the genus Marinobacter including C_16:0, C_16:1 ω7c, C_18:1 ω9c and C_18:1 ω7c. The G+C content of the DNA for strains R9SW1^T and A3d10^T were determined to be 57.1 mol% and 57.6 mol%, respectively. The two new strains share 97.6% of their 16S rRNA gene sequences, with 82.3% similarity in the average nucleotide identity (ANI), 19.8% similarity in the in silico genome-to-genome distance (GGD), 68.1% similarity in the average amino acid identity (AAI) of all conserved protein-coding genes, and 31 of the Karlin''s genomic signature dissimilarity. A phylogenetic analysis showed that R9SW1^T clusters with M. algicola DG893^T sharing 99.40%, and A3d10^T clusters with M. sediminum R65^T sharing 99.53% of 16S rRNA gene sequence similarities. The results of the genomic and polyphasic taxonomic study, including genomic, genetic, phenotypic, chemotaxonomic and phylogenetic analyses based on the 16S rRNA, gyrB and rpoD gene sequence similarities, the analysis of the protein profiles generated using MALDI-TOF mass spectrometry, and DNA-DNA relatedness data, indicated that strains R9SW1^T and A3d10^T represent two novel species of the genus Marinobacter. The names Marinobacter salarius sp. nov., with the type strain R9SW1^T ( =  LMG 27497^T  =  JCM 19399^T  =  CIP 110588^T  =  KMM 7502^T) and Marinobacter similis sp. nov., with the type strain A3d10^T ( =  JCM 19398^T  =  CIP 110589^T  =  KMM 7501^T), are proposed.