核不均-核糖核蛋白功能与疾病关系的研究进展

核不均-核糖核蛋白（heterogeneous nuclear ribonucleoprotein,hnRNPs）是人体广泛表达的一类蛋白,该蛋白家族与人体健康密切相关,hnRNPs参与了多种疾病的发生过程,如病毒疾病、肿瘤疾病、自身免疫性疾病等;hnRNPs也参与了特异基因的调节,如cyp2a5、CYP2A6、eNOS等;机体内物质纷繁,且hnRNPs又与其他物质之间存在千丝万缕的联系,因此需要进一步加强对hnRNPs与相关疾病发病机制以及对特异基因调节机制的研究,揭开其中的奥秘。     

hnRNP U复合物结构及功能

核不均一核糖核蛋白（heterogeneous nuclear ribonucleoprotein,hnRNPs）是一组RNA结合蛋白,它们与人体健康密切相关,参与肿瘤发生、病毒感染、细胞凋亡等多种病理生理过程的调节.hnRNP U是其中分子量最大的磷酸化蛋白质,对基因的转录、定位和表达特别是性染色体的表观失活过程发挥着重要作用.hnRNP U多以DNA/RNA蛋白复合物形式参与细胞功能调节.     

核内小体的复杂结构与多样化功能

核内小体是定位于细胞核内的无膜结构,为多蛋白-RNA复合体,通过招募相关蛋白参与基因转录、RNA剪切、表观遗传调控、肿瘤发生与抑制及抗病毒防御等多种细胞活动。明确核内小体蛋白的形成过程、功能和调控机制对研究相关疾病与病毒-宿主作用机制均具有重要意义。以下以几种核内小体蛋白为例,对核内小体的形成方式、结构与功能进行综述,并重点阐述其在抗病毒感染中的重要作用,期望为宿主抗病毒免疫机制研究提供一个新的靶标。     

肝细胞核因子的调控作用研究新进展

肝细胞核因子(HNF,Hepatocyte nuclear factor)是调节肝脏基因特异性表达的一类转录因子,主要包括HNF1、HNF3、HNF4和HNF6等,这些转录因子相互作用构成复杂的调控网络。HNF在人体多个重要组织器官如肝、胰、肠、肾等都有不同程度的表达。研究发现,在多种疾病的患者体内,存在着编码这些因子基因的突变,提示HNF与维持及调节人体正常生理功能密不可分。本文旨在对HNF的研究进展作以系统性综述,为研究HNF相关疾病的发生机制并进行有效的干预提供新思路。     

孤儿核受体类固醇生成因子1

孤儿核受体是核受体超家族中较独特的成员,它参与了糖类、脂类及胆固醇和类固醇激素的代谢,可能是体内细胞基本功能的重要调节因子。孤儿核受体SF－1最初作为肾上腺和性腺中的P450羟化酶必需的调节子而被鉴定,在类固醇组织、垂体和下丘脑腹内侧核均有表达,SF01在基础结构上具有不同于其他核受体的特征结构域,并广泛参与许多基因如类固醇合成酶类、Muellerian抑制性物质、黄体生成素β亚基启动子等的表达调控,基因剔除实验证实SF－1是肾上腺类固醇合成和性别分化中的一个关键调节因子。     

核受体Rev-Erbα与代谢及心血管疾病

人类生理过程呈现24小时的生物节律,其受时钟基因控制和调节。细胞核受体Rev-Erbα是生物钟系统的重要组成部分,不仅是生物钟基因而且是生物钟调节基因,在维持生物节律准确性中发挥着重要作用;同时,Rev-Erbα调节糖代谢、脂质代谢、脂肪形成、纤溶蛋白降解、血管炎症并与其他与能量平衡相关核受体相互作用参与动脉粥样硬化发生发展过程。以往认为Rev-Erbα是一种孤儿受体,但最近发现其配体是血红素,这一发现拓宽了对该基因的理解并使其成为新的药物靶点。本文提出Rev-Erbα作为生物节律、代谢、免疫调节的共同节点,参与代谢疾病和心血管疾病的过程;并就最新研究进展进行了综述。     

核纤层蛋白B1的功能及其在神经系统疾病和肿瘤中的研究新进展

核纤层蛋白B1 (Lamin B1)是核纤层蛋白家族重要成员之一,其主要功能在于维持细胞核骨架完整性,并通过影响染色体分布、基因表达及DNA损伤修复等参与细胞的增殖和衰老。其表达异常与多种疾病有关,如神经系统疾病(神经管畸形,ADLD)及肿瘤(胰腺癌)等,是潜在的药物靶点和肿瘤标志物。对Lamin B1功能的深入研究,将有助于对相关神经系统疾病和肿瘤发生发展的分子机制的了解并为治疗靶点研究提供新方向。     

线粒体疾病与核基因－线粒体基因的表达调控

线粒体与疾病是当前生物医学领域最前沿之一。本文简单介绍线粒体生物医学的基础知识、线粒体疾病的遗传模式,综述了近年来在线粒体DNA（mtDNA）突变和疾病、核基因突变和疾病等领域的研究进展,着重阐明核基因（特别是核修饰基因）调控mtDNA突变致病表达的分子机制。     

剪接因子SQD在家蚕中的表达定位与功能分析

BmSQD(Bombyx mori SQUID)是一种具有RRM结构域(RNA recognition motif, RRM)的核内不均一核糖核蛋白(heterogeneous nuclear ribonucleoproteins, hnRNPs)。为探究SQD在家蚕中的表达定位和功能,在生物信息学分析和克隆表达与抗体制备的基础上,本文通过对变态发育和胚胎发育时期部分组织的BmSQD蛋白水平和mRNA水平表达量进行分析,辅以组织细胞定位的免疫组化分析,对SQD蛋白的基本特性和在家蚕Bombyx mori中的表达定位及功能进行了研究。生物信息学分析显示,昆虫中的SQD同源基因相似性高,尤其是SQD蛋白二级结构的α螺旋和β折叠按照β1-α1-β2-β3-α2-β4的空间顺序组合形成的两个RRM结构域在昆虫中高度保守;BmSQD是一种亲水性且具有特定空间结构的hnRNPs蛋白,存在潜在的磷酸化位点;BmSQD在家蚕中的大部分组织中都有表达,尤其在卵巢与精巢等重要组织,且主要在家蚕发育的重要时期如胚胎发育与变态发育时期高表达,主要定位在细胞核内,对基因转录后调节起到剪接调控作用。本文为研究SQ...     

核钙信号与基因表达调节

钙（Ca^2 ）是细胞内重要的第二信使,近年的一些研究证实胞质Ca^2 和核Ca^2 信号通过不同的机制影响基因转录,核Ca^2 通过CaM激酶调节核蛋白磷酸化及cAMP反应元件结合蛋白（CREB）介导转录,胞质Ca^2 信号则触动血清反应元件（SRE）介导的基因转录。另外,核Ca^2 也参与多种核酶和核蛋白转运等核过程的调节。     

Identification of a Heterogeneous Nuclear Ribonucleoprotein-recognition Region in the HIV Rev Protein

The Rev protein is a key regulator of human immunodeficiency virus type 1 (HIV-1) gene expression. Rev is primarily known as an adaptor protein for nuclear export of HIV RNAs. However, Rev also contributes to numerous other processes by less well known mechanisms. Understanding the functional nature of Rev requires extensive knowledge of its cellular interaction partners. Here we demonstrate that Rev interacts with members of a large family of multifunctional host cell factors called hnRNPs. Rev employs amino acids 9–14 for specific binding to the heterogeneous nuclear ribonucleoproteins (hnRNP) A1, Q, K, R, and U. In addition, Rev interacts with hnRNP E1 and E2 by a different mechanism. The set of hnRNPs recognized by the N terminus of Rev feature RGG boxes. Exemplary testing of hnRNP A1 revealed a critical role of arginine residues within the RGG box for interaction with Rev. Finally, we demonstrate that expression levels of hnRNP A1, Q, K, R, and U influence HIV-1 production by persistently infected astrocytes, linking these hnRNPs to HIV replication. The novel interaction of HIV-1 Rev with functionally diverse hnRNPs lends further support to the idea that Rev is a multifunctional protein and may be involved in coupling HIV replication to diverse cellular processes and promoting virus-host cell interactions.     

HnRNP A/B蛋白D亚群的生物学功能

核不均一核糖核蛋白（heterogeneous nuclear ribonucleoproteins, hnRNPs）是一类结合DNA和RNA的核蛋白,并能在核质间穿梭. A/B型hnRNPs（heterogeneous nuclear ribonucleoproteins,hnRNP A/B）是hnRNPs中研究最为清楚的一大类别,生物信息学分析hnRNP A/B可以区分成A和D两个亚群,已鉴定的D亚群主要成员包括hnRNP AB, D和DL. hnRNP A/B的D亚群均含有2个保守的RNA结合结构域（RNA binding domain, RBD）和1个Gly富集区（glycine-rich domain, GRD）,成员间的主要区别在于N端和C端的长度和序列不同. D亚群与pre-mRNA和其它蛋白质结合成微粒系统,参与pre-mRNA的加工、稳定、核输出以及翻译过程. 此外,D亚群也能结合单链和双链DNA,参与转录起始和端粒的稳定. 因此,hnRNP A/B的 D亚群在各个阶段影响基因的表达,在神经系统发育、肿瘤的发生发展及衰老过程中发挥着多样性的功能.     

Heterogeneous nuclear ribonucleoproteins C1 and C2 associate with the RNA component of human telomerase

Here we demonstrate that heterogeneous nuclear ribonucleoproteins (hnRNPs) C1 and C2 can associate directly with the integral RNA component of mammalian telomerase. The binding site for hnRNPs C1 and C2 maps to a 6-base uridylate tract located directly 5' to the template region in the human telomerase RNA (TR) and a 4-base uridylate tract directly 3' to the template in the mouse TR. Telomerase activity is precipitated with antibodies specific to hnRNPs C1 and C2 from cells expressing wild-type human TR but not a variant of the human TR lacking the hnRNPs C1 and C2 binding site, indicating that hnRNPs C1 and C2 require the 6-base uridylate tract within the human TR to associate with the telomerase holoenzyme. In addition, we demonstrate that binding of hnRNPs C1 and C2 to telomerase correlates with the ability of telomerase to access the telomere. Although correlative, these data do suggest that the binding of hnRNPs C1 and C2 to telomerase may be important for the ability of telomerase to function on telomeres. The C proteins of the hnRNP particle are also capable of colocalizing with telomere binding proteins, suggesting that the C proteins may associate with telomeres in vivo. Therefore, human telomerase is capable of associating with core members of the hnRNP family of RNA binding proteins through a direct and sequence-specific interaction with the human TR. This is also the first account describing the precise mapping of a sequence in the human TR that is required to associate with an auxiliary component of the human telomerase holoenzyme.     

In vivo and in vitro arginine methylation of RNA-binding proteins.

Heterogenous nuclear ribonucleoproteins (hnRNPs) bind pre-mRNAs and facilitate their processing into mRNAs. Many of the hnRNPs undergo extensive posttranslational modifications including methylation on arginine residues. hnRNPs contain about 65% of the total NG,NG-dimethylarginine found in the cell nucleus. The role of this modification is not known. Here we identify the hnRNPs that are methylated in HeLa cells and demonstrate that most of the pre-mRNA-binding proteins receive this modification. Using recombinant human hnRNP A1 as a substrate, we have partially purified and characterized a protein-arginine N-methyltransferase specific for hnRNPs from HeLa cells. This methyltransferase can methylate the same subset of hnRNPs in vitro as are methylated in vivo. Furthermore, it can also methylate other RNA-binding proteins that contain the RGG motif RNA-binding domain. This activity is evolutionarily conserved from lower eukaryotes to mammals, suggesting that methylation has a significant role in the function of RNA-binding proteins.     

Activation of alpha-tropomyosin exon 2 is regulated by the SR protein 9G8 and heterogeneous nuclear ribonucleoproteins H and F

The inclusion of exons 2 and 3 of alpha-tropomyosin is governed through tissue-specific alternative splicing. These exons are mutually exclusive, with exon 2 included in smooth muscle cells and exon 3 included in nearly all other cell types. Several cis-acting sequences contribute to this splicing decision: the branchpoints and pyrimidine tracts upstream of both exons, UGC-repeat elements flanking exon 3, and a series of purine-rich enhancers in exon 2. Previous work showed that proteins rich in serine-arginine (SR) dipeptides act through the exon 2 enhancers, but the specific proteins responsible for such activation remained unknown. Here we show that a 35-kDa member of the SR protein family, 9G8, can activate the splicing of alpha-tropomyosin exon 2. Using RNA affinity chromatography and cross-linking competition assays, we also demonstrate that the heterogeneous nuclear ribonucleoproteins (hnRNPs) H and F bind to and compete for the same elements. Overexpression of hnRNPs H and F blocked 9G8-mediated splicing both in vivo and in vitro, and small interfering RNA-directed depletion of H and F led to an increase in exon 2 splicing. These data suggest that the activation of exon 2 is dependent on the antagonistic activities of 9G8 and hnRNPs H and F.