Siderophore production of African dust microorganisms over Trinidad and Tobago

Iron (Fe) deposition from African dust has been implicated in a variety of environmental impacts on downwind terrestrial and marine ecosystems throughout the Caribbean. The most abundant form of Fe in African dust is Fe^III, which is often not bioavailable. The objective of this study was to determine to what degree microorganisms isolated from African dust collected in Trinidad and Tobago are capable of producing siderophores that mobilize bioavailable Fe into the environment. Aerosol samples were collected for microbial analyses during African dust conditions in the source region (Mali) and downwind sites (Trinidad and Tobago). Microbial community fingerprints, obtained by means of terminal restriction fragment length polymorphism analysis, were compared among aerosol samples and possible Trinidadian sources of locally aerosolized microorganisms (sea water and soils). Ordination of the fingerprint data revealed similarities between aerosols from the source region and the aerosols and soils of downwind regions. Aerosol isolates from the downwind sites were screened for siderophore production using a modified chrome azurol-S (CAS) assay. Twenty-five percent of isolates tested that were sampled under non-dust conditions and 65% of African dust isolates produced at least one type of siderophore; among African dust isolates, all known classes of siderophores were produced. These data support African dust microorganism siderophore production as a viable mechanism by which Fe bioavailability may be increased in downwind locations, given appropriate conditions for microbial proliferation.     

Trajectory of aerosol droplets from a sprayed bacterial suspension.

Simulated droplet trajectories of a polydispersed microbial aerosol in a laminar air flow regimen were compared with observed dispersal patterns of aerosolized Bacillus subtilis subsp. niger spores in quasilaminar airflow. Simulated dispersal patterns could be explained in terms of initial droplet sizes and whether the droplets evaporated to residual aeroplanktonic size before settling to the ground. For droplets that evaporated prior to settling out, a vertical downwind size fractionation is predicted in which the microbial residue of the smallest droplets settles the least, and is found in the airstream at about sprayer height, and progressively larger droplet residues settle to progressively lower heights. Observations of spore particle size distributions downwind from a spray source support the simulation. Droplet and particle size distributions near the source had three size fractions: one containing large, presumably nonevaporated droplets of greater than or equal to 7 microns in diameter, and two smaller fractions, with diameters of 2 to 3 microns (probably the residue of droplets containing more than one spore) and 1 to 2 microns (probably the residue from single-spore droplets). As predicted by the simulation, the aerosol settled and progressed downwind, with the number of small droplets and particles increasing in proportion to the height and distance downwind.     

Trajectory of aerosol droplets from a sprayed bacterial suspension

Simulated droplet trajectories of a polydispersed microbial aerosol in a laminar air flow regimen were compared with observed dispersal patterns of aerosolized Bacillus subtilis subsp. niger spores in quasilaminar airflow. Simulated dispersal patterns could be explained in terms of initial droplet sizes and whether the droplets evaporated to residual aeroplanktonic size before settling to the ground. For droplets that evaporated prior to settling out, a vertical downwind size fractionation is predicted in which the microbial residue of the smallest droplets settles the least, and is found in the airstream at about sprayer height, and progressively larger droplet residues settle to progressively lower heights. Observations of spore particle size distributions downwind from a spray source support the simulation. Droplet and particle size distributions near the source had three size fractions: one containing large, presumably nonevaporated droplets of greater than or equal to 7 microns in diameter, and two smaller fractions, with diameters of 2 to 3 microns (probably the residue of droplets containing more than one spore) and 1 to 2 microns (probably the residue from single-spore droplets). As predicted by the simulation, the aerosol settled and progressed downwind, with the number of small droplets and particles increasing in proportion to the height and distance downwind.     

Die-away kinetics of aerosolized bacteria from sprinkler application of wastewater.

A methodology for estimating, under field conditions, the microbial die-away constant (lambda) is presented. This constant may be used in predicting the aerosolized pathogenic microorganism concentrations downwind from a wastewater spray or aeration site by means of modified atmospheric diffusion equations. The mean lambda of Escherichia coli for very early morning runs was 8.8 X 10(-3)s-1, and that for afternoon runs was 6.6 X 10(-2)s-1.     

Comparison of coliphage and bacterial aerosols at a wastewater spray irrigation site.

Microbiological aerosols were measured on a spray irrigation site at Fort Huachuca, Ariz. Indigenous bacteria and tracer bacteriophage were sampled from sprays of chlorinated and unchlorinated secondary-treatment wastewaters during day and night periods. Aerosol dispersal and downwind migration were determined. Bacterial and coliphage f2 aerosols were sampled by using Andersen viable type stacked-sieve and high-volume electrostatic precipitator samplers. Bacterial standard plate counts averaged 2.4 x 10(5) colony-forming units per ml in unchlorinated effluents. Bacterial aerosols reached 500 bacteria per m3 at 152 m downwind and 10,500 bacteria per m3 at 46m. Seeded coliphage f2 averaged 4.0 x 10(5) plaque-forming units per ml in the effluent and were detected 563 m downwind. Downwind microbial aerosol levels were somewhat enhanced by nighttime conditions. The median aerodynamic particle size of the microbial aerosols was approximately 5.0 micrometer. Chlorination reduced wastewater bacterial levels 99.97% and reduced aerosol concentrations to near background levels; coliphage f2 was reduced only 95.4% in the chlorinated effluent and was readily measured 137 m downwind. Microbiological source strength an meteorological data were used in conjunction with a dispersion model to generate mathematical predictions of aerosol strength at various sampler locations. The mean calculated survival of aerosolized bacteria (standard plate count) in the range 46 to 76 m downwind was 5.2%, and that of coliphage f2 was 4.3 %.     

Dispersion of carbon dioxide plumes in African woodland: implications for host-finding by tsetse flies

Abstract. In Zimbabwe, high‐resolution (10 Hz to an accuracy of ± 0.1 p.p.m.) measurements were made of atmospheric and host‐produced CO₂ in tsetse habitats during the dry season. The diel structure of atmospheric CO₂ concentrations is bimodal, with a minimum at approximately 16.00 hours and maxima at approximately 05.00 hours and 20.00 hours, respectively. The background CO₂ noise is greater in densely vegetated riverine woodland than in leafless, deciduous (mopane) woodland. Variation in atmospheric CO₂ concentrations is correlated with decreasing wind speed and increasing thermal stability. Consequently, the background noise during the day is greatest in riverine woodland during early morning and late afternoon, when winds are typically light and stable, and thermal inversion conditions are developing. Measurements were made of CO₂ at 8–64 m downwind from natural (two cattle) or synthetic sources (4–20 L min^?1 CO₂). The signal from the sources appears as fluctuations above threshold (approximately 355–362 p.p.m.), in the form of intermittent ‘bursts’ of CO₂. The strength, duration and intermittency of the signals attributable to these sources declines with source strength and distance from the source. In riverine woodland, approximately 50% of all bursts are 0.1 s long, and 10% are > 2.0 s long. Carbon dioxide signals from equivalent sources are stronger in riverine woodland than mopane. Carbon dioxide dispensed at rates of 4–20 L min^?1 is detected up to 64 m downwind of the source but peaks are typically < 10 p.p.m. above threshold. Consequently, host‐CO₂ signals are obscured during periods of large fluctuations in atmospheric CO₂. These results suggest that CO₂ is detectable, at least in some circumstances, at tens of metres downwind and hence dispels the notion that its action is limited to that of a short‐range attractant.     

Intercontinental Dispersal of Bacteria and Archaea by Transpacific Winds

Microorganisms are abundant in the upper atmosphere, particularly downwind of arid regions, where winds can mobilize large amounts of topsoil and dust. However, the challenge of collecting samples from the upper atmosphere and reliance upon culture-based characterization methods have prevented a comprehensive understanding of globally dispersed airborne microbes. In spring 2011 at the Mt. Bachelor Observatory in North America (2.8 km above sea level), we captured enough microbial biomass in two transpacific air plumes to permit a microarray analysis using 16S rRNA genes. Thousands of distinct bacterial taxa spanning a wide range of phyla and surface environments were detected before, during, and after each Asian long-range transport event. Interestingly, the transpacific plumes delivered higher concentrations of taxa already in the background air (particularly Proteobacteria, Actinobacteria, and Firmicutes). While some bacterial families and a few marine archaea appeared for the first and only time during the plumes, the microbial community compositions were similar, despite the unique transport histories of the air masses. It seems plausible, when coupled with atmospheric modeling and chemical analysis, that microbial biogeography can be used to pinpoint the source of intercontinental dust plumes. Given the degree of richness measured in our study, the overall contribution of Asian aerosols to microbial species in North American air warrants additional investigation.     

Source tracking aerosols released from land-applied class B biosolids during high-wind events

DNA-based microbial source tracking (MST) methods were developed and used to specifically and sensitively track the unintended aerosolization of land-applied, anaerobically digested sewage sludge (biosolids) during high-wind events. Culture and phylogenetic analyses of bulk biosolids provided a basis for the development of three different MST methods. They included (i) culture- and 16S rRNA gene-based identification of Clostridium bifermentans, (ii) direct PCR amplification and sequencing of the 16S rRNA gene for an uncultured bacterium of the class Chloroflexi that is commonly present in anaerobically digested biosolids, and (iii) direct PCR amplification of a 16S rRNA gene of the phylum Euryarchaeota coupled with terminal restriction fragment length polymorphism to distinguish terminal fragments that are unique to biosolid-specific microorganisms. Each method was first validated with a broad group of bulk biosolids and soil samples to confirm the target's exclusive presence in biosolids and absence in soils. Positive responses were observed in 100% of bulk biosolid samples and in less than 11% of the bulk soils tested. Next, a sampling campaign was conducted in which all three methods were applied to aerosol samples taken upwind and downwind of fields that had recently been land applied with biosolids. When average wind speeds were greater than 5 m/s, source tracking results confirmed the presence of biosolids in 56% of the downwind samples versus 3% of the upwind samples. During these high-wind events, the biosolid concentration in downwind aerosols was between 0.1 and 2 microg/m3. The application of DNA-based source tracking to aerosol samples has confirmed that wind is a possible mechanism for the aerosolization and off-site transport of land-applied biosolids.     

Dispersal of Aspergillus fumigatus from Sewage Sludge Compost Piles Subjected to Mechanical Agitation in Open Air

Aerosolization of the thermophilous fungal opportunist Aspergillus fumigatus from mechanically agitated compost piles was examined at a pilot-scale sewage sludge composting facility and two other selected test sites. Aerosols of A. fumigatus downwind from stationary compost piles were insignificant in comparison with those downwind from agitated piles. These aerosols were generated by a front-end loader moving and dropping compost. Aerial concentrations of the fungus at distances downwind from the point of emission were used to determine an emission rate for A. fumigatus associated with the moving operations. The maximum emission rate, 4.6 × 10⁶A. fumigatus particles per s, was used to calculate predicted concentrations in an unobstructed plume with restrictive, neutral, and dispersive atmospheric mixing conditions up to 1 km downwind from the emission source.     

Microbial growth on polluted leaf and litter leachates: Effects on leachate pH and sulphate concentration

Summary Leaves and litter ofAcer pseudoplatanus L. (sycamore) were collected from woodland downwind of a coking works and from a site close to the industrial city of Sheffield and leached with water or simulated acid rain (pH 4.0). The effects of microbial growth on litter leachate, pH and sulphate concentration were determined by (a) allowing the indigenous litter flora to develop or (b) inoculating the fungusAureobasidium pullulans into sterilized leachates amended with synthetic aphid honeydew as carbon source. In both experiments microbial growth generally increased the pH and sulphate concentration of the leachates, independent of the origin of the litter or the leaching agent. The growth ofA. pullulans however, generally decreased the pH and sulphate content of sycamore leaf leachates. We conclude that the microbial mineralization of organic sulphur in deciduous litter leachate can act as a source of sulphate which could enhance cation leaching in atmospheric-pulluted soils.     

Wind‐mediated horseweed (Conyza canadensis) gene flow: pollen emission,dispersion, and deposition

Horseweed (Conyza canadensis) is a problem weed in crop production because of its evolved resistance to glyphosate and other herbicides. Although horseweed is mainly self-pollinating, glyphosate-resistant (GR) horseweed can pollinate glyphosate-susceptible (GS) horseweed. To the best of our knowledge, however, there are no available data on horseweed pollen production, dispersion, and deposition relative to gene flow and the evolution of resistance. To help fill this knowledge gap, a 43-day field study was performed in Champaign, Illinois, USA in 2013 to characterize horseweed atmospheric pollen emission, dispersion, and deposition. Pollen concentration and deposition, coupled with atmospheric data, were measured in a source field (180 m by 46 m) and its surrounding areas up to 1 km downwind horizontally and up to 100 m vertically. The source strength (emission rate) ranged from 0 to 140 pollen grains per plant per second (1170 to 2.1×10⁶ per plant per day). For the life of the study, the estimated number of pollen grains generated from this source field was 10.5×10¹⁰ (2.3×10⁶ per plant). The release of horseweed pollen was not strongly correlated to meteorological data and may be mainly determined by horseweed physiology. Horseweed pollen reached heights of 80 to100 m, making long-distance transport possible. Normalized (by source data) pollen deposition with distance followed a negative-power exponential curve. Normalized pollen deposition was 2.5% even at 480 m downwind from the source edge. Correlation analysis showed that close to or inside the source field at lower heights (≤3 m) vertical transport was related to vertical wind speed, while horizontal pollen transport was related to horizontal wind speed. High relative humidity prevented pollen transport at greater heights (3–100 m) and longer distances (0–1000 m) from the source. This study can contribute to the understanding of how herbicide-resistance weeds or invasive plants affect ecology through wind-mediated pollination and invasion.     

Characterization of Aerosolized Bacteria and Fungi From Desert Dust Events in Mali, West Africa

Millions of metric tons of African desert dust blow across the Atlantic Ocean each year, blanketing the Caribbean and southeastern United States. Previous work in the Caribbean has shown that atmospheric samples collected during dust events contain living microbes, including plant and opportunistic human pathogens. To better understand the potential downwind public health and ecosystem effects of the dust microbes, it is important to characterize the source population. We describe 19 genera of bacteria and 3 genera of fungi isolated from air samples collected in Mali, a known source region for dust storms, and over which large dust storms travel.     

Aerial short-range dispersion of volatilized pesticides from an area source

Owing to legal provisions, pesticides have to be applied in such a way that there is no unacceptable influence on human health and the environment at nearby non-target areas. In order to quantify their concentration over and downwind of agricultural target plots of 0.5-1 ha, covered by winter wheat and winter barely, the pesticides lindane, parathion and pirimicarb were applied. Over these plots the post-application volatilization rates of the pesticides were estimated indirectly from vertical concentration, wind and temperature profile measurements using the aerodynamic gradient technique. Philip's advection model was applied to take non-favourable fetch conditions into account. In addition, at a height of 1.6 m downwind of the area source, measurements of the horizontal concentration profile were made up to a distance of about 250 m at roughly 50-m intervals. The monitoring started immediately after spraying in the morning and continued for about 8-10 h, thus providing a worst-case situation because volatilization, and therefore pesticide concentration in the atmospheric surface layer, is then strongest. The concentration of the airborne pesticides over the downwind non-target area was also calculated by Philip's advection model. By using the Nash-Sutcliffe relative-difference measure between observed and calculated concentrations, a goodness-of-fit of 0.97 was obtained over the downwind non-target area, indicating that the Philip model is well suited for dispersion estimates in the near-field range.     

Temporal and spatial changes in the microbial bioaerosol communities in green-waste composting

In this study, the microbial community within compost, emitted into the airstream, downwind and upwind from a composting facility was characterized and compared through phospholipid fatty acid analysis and 16S rRNA gene analysis using denaturing gradient gel electrophoresis and bar-coded pyrosequencing techniques. All methods used suggested that green-waste composting had a significant impact upon bioaerosol community composition. Daily variations of the on-site airborne community showed how specific site parameters such as compost process activity and meteorological conditions affect bioaerosol communities, although more data are required to qualify and quantify the causes for these variations. A notable feature was the dominance of Pseudomonas in downwind samples, suggesting that this genus can disperse downwind in elevated abundances. Thirty-nine phylotypes were homologous to plant or human phylotypes containing pathogens and were found within compost, on-site and downwind microbial communities. Although the significance of this finding in terms of potential health impact was beyond the scope of this study, it clearly illustrated the potential of molecular techniques to improve our understanding of the impact that green-waste composting emissions may have on the human health.     

Factors influencing the landing of maleEpiphyas postvittana (Walker) exhibiting pheromone-mediated flight (Lepidoptera: Tortricidae)

The effects of changes in various visual and olfactory properties of a white card surface on the landing position of male Epiphyas postvittanaexhibiting pheromone-mediated flight were studied in a wind tunnel. Males landed predominantly at the most downwind position of a surface in line with the pheromone source, regardless of the strength of the source. The position on the surface that males landed was strongly influenced by visual factors. The landing position of males appeared to be influenced by visual cues along all three axes of the surface. Decreases in either the dimension horizontally perpendicular to the wind direction or the vertical dimension resulted in greater numbers of males landing farther upwind on the surface than the downwind edge. Visual changes in the axis along the wind direction also affected the position at which males landed. For example, when presented with two white card surfaces with a 4- cm gap between them, males tended to land on the downwind edge of the upwind surface (on which the source was located). When the gap was bridged with clear Mylar, the landing pattern was significantly different, with the greater proportion of males landing on the downwind surface. However, when Mylar was placed on the plexiglass floor of the tunnel (in addition to bridging the gap), the landing pattern on the surface was not significantly different from that on the two surfaces without the Mylar bridge. It is suggested that during the prelanding and landing phases of pheromone-mediated flight, male moths orient to visual features of the surface containing the pheromone source rather than to visual features of the source (conspecific female moth) itself.     

Nitrogen economy of endolithic microbial communities in hot and cold deserts

The source of combined nitrogen in endolithic microbial communities was studied in samples from desert localities in North and South America, the Middle East, South Africa, and Antarctica. Nitrogen fixation (acetylene reduction) seems to occur only exceptionally. Evidence suggests that, in general, the nitrogen source for endolithic microorganisms in deserts is abiotically fixed nitrogen produced by atmospheric electric discharges (lightning or aurorae), conveyed to the rock by atmospheric precipitation. Nitrogen is apparently not a limiting factor in these low-productivity communities. An incomplete nitrogen cycle seems to be present which includes the following pathways: supply of nitrates and ammonia from the atmosphere; decomposition of organic matter to ammonia; reassimilation of ammonia; ammonia volatilization; loss of organic matter through weathering (only in certain Antarctic rocks); biological nitrogen fixation (exceptional).     

Electroantennogram responses of tsetse flies (Glossina pallidipes) to host odours in an open field and riverine woodland

The present study was initiated to gain insight into the way in which tsetse flies ( Glossina spp.) sense odours at different locations in odour plumes in both an open field and a wooded area.
We recorded the antennal responses (EAGs) from stationary living female G. pallidipes 15 m upwind and at various (60, 40, 20, 10, 5 and 1 m) distances downwind from a synthetic host odour source (containing 1-octen-3-ol, acetone and two phenols), in the natural habitat of the fly (Zimbabwe) using a portable electrophysiological device. Experiments were performed in a flat open area (an airstrip) and in riverine woodland. Differences between responses in different environments were determined by comparing various parameters of the EAGs (intermittency, frequency, amplitude, duration and rate of depolarization).
We found that a fly senses odours as puffs that, further downwind, contain less odour and pass less frequently. In an open field downwind from the source, tsetse perceive more olfactory information than upwind for only 10–20 m, whereas in woodland, olfactory responses remain higher and more frequent than upwind up to at least 60 m. In an open field, olfactory information rapidly increases when approaching the odour source from 20 m and in woodland from 5 m onwards.
It is proposed that averaging odour information over time may be of minor importance in long-range location of odour sources. The results suggest that tsetse may smell odour-baited targets from at least 60 m downwind and that the number of flies responding to and being caught by these baits may be higher in woodland than in an open field.     

SOM genesis: microbial biomass as a significant source

Proper management of soil organic matter (SOM) is needed for maintaining soil fertility and for mitigation of the global increase in atmospheric CO₂ concentrations and should be informed by knowledge about the sources, spatial organisation and stabilisation processes of SOM. Recently, microbial biomass residues (i.e. necromass) have been identified as a significant source of SOM. Here, we propose that cell wall envelopes of bacteria and fungi are stabilised in soil and contribute significantly to small-particulate SOM formation. This hypothesis is based on the mass balance of a soil incubation experiment with ¹³C-labelled bacterial cells and on the visualisation of the microbial residues by means of scanning electron microscopy (SEM). At the end of a 224-day incubation, 50% of the biomass-derived C remained in the soil, mainly in the non-living part of SOM (40% of the added biomass C). SEM micrographs only rarely showed intact cells. Instead, organic patchy fragments of 200–500 nm size were abundant and these fragments were associated with all stages of cell envelope decay and fragmentation. Similar fragments, developed on initially clean and sterile in situ microcosms during exposure to groundwater, provide clear evidence for their formation during microbial growth and surface colonisation. Microbial cell envelope fragments thus contribute significantly to SOM formation. This origin and the related macromolecular architecture of SOM are consistent with most observations on SOM, including the abundance of microbial-derived biomarkers, the low C/N ratio, the water repellency and the stabilisation of biomolecules, which in theory should be easily degradable.     

Spatial and temporal structures of pheromone plumes in fields and forests

Wind‐borne odour stimuli from a small point‐source of pheromone are intermittent owing to the effects of atmospheric turbulence on the odour plume. The work reported here measures the characteristics of the intermittent stimulus in open fields and forests during typical daytime atmospheric conditions. To model the pheromone plume, negatively charged atmospheric ions were used as a tracer. They were released from an ion generator, and ion detectors measured the fluctuating flux of ions at positions up to 20 m downwind in the open field case and 10 m in the forest. In both the open field and in the forest, ion signals were highly intermittent, with a signal present only 20% of the time. Ion signals recorded in the forest consisted of bursts with gaps between them of at least three‐fold greater duration than those from the open field. In both environments, bursts generally each comprised a series of ‘spikes’, on average three in the field and seven in the forest. To validate the use of ionized air plumes as models of pheromone plumes, the antennae of male Lymantria dispar (gypsy moth) were used as detectors to quantify the plume of synthetic (+)‐disparlure emanating from a 2000 ng point source placed ≈ 10 cm from the ion source. A comparison of ion signals and EAGs (electronantennograms) suggests that the antennae respond to the main spikes within a burst, but no consistent relationship between the strength of the spikes and the magnitude of the EAG response was found. The average strengths of bursts in the ion detector signal decreased systematically as the distance from the ion generator to the ion detector increased. A similar trend, however, was not detected in the EAG response.     

Characterization of halotolerant and oligotrophic bacterial communities in Asian desert dust (KOSA) bioaerosol accumulated in layers of snow on Mount Tateyama, Central Japan

Microbial particles transported by Asian desert dust (KOSA) possibly impact ecosystems and human health in downwind environments and are commonly called ??bioaerosols.?? The microbial communities associated with KOSA mineral particles (KOSA bioaerosol), which were collected from the snow cover on Mt. Tateyama, were investigated by means of a culture-amendment technique combined with denaturing gradient gel electrophoresis (DGGE) analysis using 16S rRNA genes. After the stratigraphy of the snow layer formed on the walls of a snow pit on Mt. Tateyama, samples were collected from 2 layers, which included KOSA particles and one which did not. The snow samples with KOSA particles indicated microbial growth in the 10⁰ and 10^?1 dilution media and in the medium with NaCl below 10%, while the snow sample without KOSA particles showed no microbial growth in the culture media. The PCR?CDGGE analysis revealed that the bacterial compositions in the snow samples including KOSA mineral particles were mainly composed of the members of the phyla Actinobacteria, Firmicutus, and Proteobacteria. In particular, the 2 phylotypes appeared in the microbial cultures were similar to the members of the B. subtilis group, which has been detected in bioaerosol samples collected from the atmosphere over KOSA arrival (Suzu City) and source (Dunhuang City) regions. Presumably, halotolerant and oligotrophic bacterial communities are associated with the KOSA particles that descend to the snow cover on Mt. Tateyama.